Package evaluation to test GaussianRelations on Julia 1.14.0-DEV.1372 (893635dc59*) started at 2025-12-16T17:28:44.932


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...
  Activating project at `~/.julia/environments/v1.14`

Set-up completed after 7.68s


################################################################################
# Installation
#

Installing GaussianRelations...
   Resolving package versions...
┌ Warning: tarball content of url https://api.github.com/repos/AlgebraicJulia/ACSets.jl/tarball/80ca69d6844aa5a1e67338b5362e393007c4c168 does not match git-tree-sha1, expected 80ca69d6844aa5a1e67338b5362e393007c4c168, got UInt8[0xd1, 0x1b, 0xa5, 0x13, 0x1c, 0x10, 0xde, 0x7a, 0x07, 0x55, 0x00, 0x30, 0xe6, 0x80, 0xaf, 0xa0, 0x1e, 0x32, 0xbf, 0xfb]
└ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:1176
     Cloning [227ef7b5-1206-438b-ac65-934d6da304b8] ACSets from https://github.com/AlgebraicJulia/ACSets.jl.git
   Installed ACSets ─ v0.2.26
    Updating `~/.julia/environments/v1.14/Project.toml`
  [8e80e5df] + GaussianRelations v0.2.1
    Updating `~/.julia/environments/v1.14/Manifest.toml`
  [227ef7b5] + ACSets v0.2.26
  [23cfdc9f] + AlgebraicInterfaces v0.1.4
⌅ [134e5e36] + Catlab v0.16.20
  [3da002f7] + ColorTypes v0.12.1
  [5ae59095] + Colors v0.13.1
  [861a8166] + Combinatorics v1.1.0
  [0fb5dd42] + CompTime v0.1.2
  [34da2185] + Compat v4.18.1
  [a81c6b42] + Compose v0.9.6
  [a8cc5b0e] + Crayons v4.1.1
  [9a962f9c] + DataAPI v1.16.0
⌅ [864edb3b] + DataStructures v0.18.22
  [e2d170a0] + DataValueInterfaces v1.0.0
  [1a297f60] + FillArrays v1.15.0
  [53c48c17] + FixedPointNumbers v0.8.5
⌅ [f0ffcf3b] + GATlab v0.1.6
  [8e80e5df] + GaussianRelations v0.2.1
  [6b9d7cbe] + GeneralizedGenerated v0.3.3
  [c8e1da08] + IterTools v1.10.0
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [692b3bcd] + JLLWrappers v1.7.1
⌅ [682c06a0] + JSON v0.21.4
  [0f8b85d8] + JSON3 v1.14.3
  [b14d175d] + JuliaVariables v0.2.4
  [b964fa9f] + LaTeXStrings v1.4.0
  [9c8b4983] + LightXML v0.9.3
  [d8e11817] + MLStyle v0.4.17
  [1914dd2f] + MacroTools v0.5.16
  [442fdcdd] + Measures v0.3.3
  [71a1bf82] + NameResolution v0.1.5
  [bac558e1] + OrderedCollections v1.8.1
  [12d937ae] + PEG v1.0.4
  [69de0a69] + Parsers v2.8.3
  [2ae35dd2] + Permutations v0.4.23
  [aea7be01] + PrecompileTools v1.3.3
  [21216c6a] + Preferences v1.5.0
  [8162dcfd] + PrettyPrint v0.2.0
⌅ [08abe8d2] + PrettyTables v2.4.0
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.1
  [90137ffa] + StaticArrays v1.9.15
  [1e83bf80] + StaticArraysCore v1.4.4
  [10745b16] + Statistics v1.11.1
  [82ae8749] + StatsAPI v1.8.0
  [892a3eda] + StringManipulation v0.4.2
  [6ec83bb0] + StructEquality v2.1.0
  [856f2bd8] + StructTypes v1.11.0
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.1
  [94ce4f54] + Libiconv_jll v1.18.0+0
  [02c8fc9c] + XML2_jll v2.15.1+0
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [f43a241f] + Downloads v1.7.0
  [7b1f6079] + FileWatching v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0
  [b27032c2] + LibCURL v1.0.0
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.13.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [44cfe95a] + Pkg v1.14.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v1.0.0
  [9e88b42a] + Serialization v1.11.0
  [2f01184e] + SparseArrays v1.13.0
  [f489334b] + StyledStrings v1.13.0
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [8dfed614] + Test v1.11.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] + LibCURL_jll v8.17.0+0
  [e37daf67] + LibGit2_jll v1.9.2+0
  [29816b5a] + LibSSH2_jll v1.11.3+1
  [14a3606d] + MozillaCACerts_jll v2025.12.2
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [458c3c95] + OpenSSL_jll v3.5.4+0
  [efcefdf7] + PCRE2_jll v10.47.0+0
  [bea87d4a] + SuiteSparse_jll v7.10.1+0
  [83775a58] + Zlib_jll v1.3.1+2
  [3161d3a3] + Zstd_jll v1.5.7+1
  [8e850b90] + libblastrampoline_jll v5.15.0+0
  [8e850ede] + nghttp2_jll v1.68.0+1
  [3f19e933] + p7zip_jll v17.7.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 5.82s


################################################################################
# Precompilation
#

ERROR: LoadError: MethodError: no method matching setindex!(::Base.ScopedValues.ScopedValue{IO}, ::Nothing)
The function `setindex!` exists, but no method is defined for this combination of argument types.
Stacktrace:
 [1] top-level scope
   @ /PkgEval.jl/scripts/precompile.jl:10
 [2] include(mod::Module, _path::String)
   @ Base ./Base.jl:309
 [3] exec_options(opts::Base.JLOptions)
   @ Base ./client.jl:344
 [4] _start()
   @ Base ./client.jl:577
in expression starting at /PkgEval.jl/scripts/precompile.jl:6

caused by: MethodError: no method matching setindex!(::Base.ScopedValues.ScopedValue{IO}, ::Base.DevNull)
The function `setindex!` exists, but no method is defined for this combination of argument types.
Stacktrace:
 [1] top-level scope
   @ /PkgEval.jl/scripts/precompile.jl:7
 [2] include(mod::Module, _path::String)
   @ Base ./Base.jl:309
 [3] exec_options(opts::Base.JLOptions)
   @ Base ./client.jl:344
 [4] _start()
   @ Base ./client.jl:577

Precompilation failed after 13.21s



################################################################################
# Testing
#

     Testing GaussianRelations
      Status `/tmp/jl_wnwOn5/Project.toml`
⌅ [134e5e36] Catlab v0.16.20
  [1a297f60] FillArrays v1.15.0
  [8e80e5df] GaussianRelations v0.2.1
  [10745b16] Statistics v1.11.1
  [82ae8749] StatsAPI v1.8.0
  [37e2e46d] LinearAlgebra v1.13.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_wnwOn5/Manifest.toml`
  [227ef7b5] ACSets v0.2.26
  [23cfdc9f] AlgebraicInterfaces v0.1.4
⌅ [134e5e36] Catlab v0.16.20
  [3da002f7] ColorTypes v0.12.1
  [5ae59095] Colors v0.13.1
  [861a8166] Combinatorics v1.1.0
  [0fb5dd42] CompTime v0.1.2
  [34da2185] Compat v4.18.1
  [a81c6b42] Compose v0.9.6
  [a8cc5b0e] Crayons v4.1.1
  [9a962f9c] DataAPI v1.16.0
⌅ [864edb3b] DataStructures v0.18.22
  [e2d170a0] DataValueInterfaces v1.0.0
  [1a297f60] FillArrays v1.15.0
  [53c48c17] FixedPointNumbers v0.8.5
⌅ [f0ffcf3b] GATlab v0.1.6
  [8e80e5df] GaussianRelations v0.2.1
  [6b9d7cbe] GeneralizedGenerated v0.3.3
  [c8e1da08] IterTools v1.10.0
  [82899510] IteratorInterfaceExtensions v1.0.0
  [692b3bcd] JLLWrappers v1.7.1
⌅ [682c06a0] JSON v0.21.4
  [0f8b85d8] JSON3 v1.14.3
  [b14d175d] JuliaVariables v0.2.4
  [b964fa9f] LaTeXStrings v1.4.0
  [9c8b4983] LightXML v0.9.3
  [d8e11817] MLStyle v0.4.17
  [1914dd2f] MacroTools v0.5.16
  [442fdcdd] Measures v0.3.3
  [71a1bf82] NameResolution v0.1.5
  [bac558e1] OrderedCollections v1.8.1
  [12d937ae] PEG v1.0.4
  [69de0a69] Parsers v2.8.3
  [2ae35dd2] Permutations v0.4.23
  [aea7be01] PrecompileTools v1.3.3
  [21216c6a] Preferences v1.5.0
  [8162dcfd] PrettyPrint v0.2.0
⌅ [08abe8d2] PrettyTables v2.4.0
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.1
  [90137ffa] StaticArrays v1.9.15
  [1e83bf80] StaticArraysCore v1.4.4
  [10745b16] Statistics v1.11.1
  [82ae8749] StatsAPI v1.8.0
  [892a3eda] StringManipulation v0.4.2
  [6ec83bb0] StructEquality v2.1.0
  [856f2bd8] StructTypes v1.11.0
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.12.1
  [94ce4f54] Libiconv_jll v1.18.0+0
  [02c8fc9c] XML2_jll v2.15.1+0
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [f43a241f] Downloads v1.7.0
  [7b1f6079] FileWatching v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0
  [b27032c2] LibCURL v1.0.0
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.13.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [a63ad114] Mmap v1.11.0
  [ca575930] NetworkOptions v1.3.0
  [44cfe95a] Pkg v1.14.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v1.0.0
  [9e88b42a] Serialization v1.11.0
  [2f01184e] SparseArrays v1.13.0
  [f489334b] StyledStrings v1.13.0
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] LibCURL_jll v8.17.0+0
  [e37daf67] LibGit2_jll v1.9.2+0
  [29816b5a] LibSSH2_jll v1.11.3+1
  [14a3606d] MozillaCACerts_jll v2025.12.2
  [4536629a] OpenBLAS_jll v0.3.29+0
  [458c3c95] OpenSSL_jll v3.5.4+0
  [efcefdf7] PCRE2_jll v10.47.0+0
  [bea87d4a] SuiteSparse_jll v7.10.1+0
  [83775a58] Zlib_jll v1.3.1+2
  [3161d3a3] Zstd_jll v1.5.7+1
  [8e850b90] libblastrampoline_jll v5.15.0+0
  [8e850ede] nghttp2_jll v1.68.0+1
  [3f19e933] p7zip_jll v17.7.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
WARNING: Constructor for type "FinCat" was extended in `FinSets` without explicit qualification or import.
  NOTE: Assumed "FinCat" refers to `FinCats.FinCat`. This behavior is deprecated and may differ in future versions.
  NOTE: This behavior may have differed in Julia versions prior to 1.12.
  Hint: If you intended to create a new generic function of the same name, use `function FinCat end`.
  Hint: To silence the warning, qualify `FinCat` as `FinCats.FinCat` in the method signature or explicitly `import FinCats: FinCat`.
WARNING: Constructor for type "SetOb" was extended in `FinSets` without explicit qualification or import.
  NOTE: Assumed "SetOb" refers to `Sets.SetOb`. This behavior is deprecated and may differ in future versions.
  NOTE: This behavior may have differed in Julia versions prior to 1.12.
  Hint: If you intended to create a new generic function of the same name, use `function SetOb end`.
  Hint: To silence the warning, qualify `SetOb` as `Sets.SetOb` in the method signature or explicitly `import Sets: SetOb`.
WARNING: Constructor for type "VarSet" was extended in `CSets` without explicit qualification or import.
  NOTE: Assumed "VarSet" refers to `FinSets.VarSet`. This behavior is deprecated and may differ in future versions.
  NOTE: This behavior may have differed in Julia versions prior to 1.12.
  Hint: If you intended to create a new generic function of the same name, use `function VarSet end`.
  Hint: To silence the warning, qualify `VarSet` as `FinSets.VarSet` in the method signature or explicitly `import FinSets: VarSet`.
WARNING: Constructor for type "VarFunction" was extended in `CSets` without explicit qualification or import.
  NOTE: Assumed "VarFunction" refers to `FinSets.VarFunction`. This behavior is deprecated and may differ in future versions.
  NOTE: This behavior may have differed in Julia versions prior to 1.12.
  Hint: If you intended to create a new generic function of the same name, use `function VarFunction end`.
  Hint: To silence the warning, qualify `VarFunction` as `FinSets.VarFunction` in the method signature or explicitly `import FinSets: VarFunction`.
WARNING: Constructor for type "ACSet" was extended in `CSets` without explicit qualification or import.
  NOTE: Assumed "ACSet" refers to `ACSets.ACSet`. This behavior is deprecated and may differ in future versions.
  NOTE: This behavior may have differed in Julia versions prior to 1.12.
  Hint: If you intended to create a new generic function of the same name, use `function ACSet end`.
  Hint: To silence the warning, qualify `ACSet` as `ACSets.ACSet` in the method signature or explicitly `import ACSets: ACSet`.
ERROR: LoadError: Precompiled image Base.PkgId(Base.UUID("a81c6b42-2e10-5240-aca2-a61377ecd94b"), "Compose") not available with flags CacheFlags(; use_pkgimages=false, debug_level=1, check_bounds=0, inline=true, opt_level=0)
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:44
  [2] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2813
  [3] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2665
  [4] macro expansion
    @ ./loading.jl:2593 [inlined]
  [5] macro expansion
    @ ./lock.jl:376 [inlined]
  [6] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2557
  [7] require
    @ ./loading.jl:2533 [inlined]
  [8] eval_import_path
    @ ./module.jl:36 [inlined]
  [9] _eval_import(imported::Bool, to::Module, from::Nothing, paths::Expr)
    @ Base ./module.jl:111
 [10] top-level scope
    @ ~/.julia/packages/Catlab/1srGD/src/graphics/ComposeWiringDiagrams.jl:7
 [11] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:310
 [12] top-level scope
    @ ~/.julia/packages/Catlab/1srGD/src/graphics/Graphics.jl:10
 [13] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:310
 [14] top-level scope
    @ ~/.julia/packages/Catlab/1srGD/src/Catlab.jl:10
 [15] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [16] include_package_for_output(pkg::Base.PkgId, input::String, syntax_version::VersionNumber, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3250
 [17] top-level scope
    @ stdin:5
 [18] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:3092
 [20] include_string
    @ ./loading.jl:3102 [inlined]
 [21] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:342
 [22] _start()
    @ Base ./client.jl:577
in expression starting at /home/pkgeval/.julia/packages/Catlab/1srGD/src/graphics/ComposeWiringDiagrams.jl:1
in expression starting at /home/pkgeval/.julia/packages/Catlab/1srGD/src/graphics/Graphics.jl:1
in expression starting at /home/pkgeval/.julia/packages/Catlab/1srGD/src/Catlab.jl:1
in expression starting at stdin:5

  1 dependency had output during precompilation:
┌ Catlab
│  [Output was shown above]
└  
ERROR: LoadError: The following 1 package failed to precompile:

Catlab 
Failed to precompile Catlab [134e5e36-593f-5add-ad60-77f754baafbe] to "/home/pkgeval/.julia/compiled/v1.14/Catlab/jl_IAUzLR" (ProcessExited(1)).

in expression starting at /home/pkgeval/.julia/packages/GaussianRelations/Nr2bP/test/runtests.jl:1

Testing failed after 218.6s

ERROR: LoadError: Package GaussianRelations errored during testing
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3067
  [3] test
    @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2916 [inlined]
  [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:572
  [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:548
  [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172
  [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161
  [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160
  [9] test
    @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined]
 [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String)
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159
 [11] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:237
 [12] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [13] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:344
 [14] _start()
    @ Base ./client.jl:577
in expression starting at /PkgEval.jl/scripts/evaluate.jl:228

PkgEval failed after 269.86s: package fails to precompile