Package evaluation to test Erdos on Julia 1.14.0-DEV.1372 (893635dc59*) started at 2025-12-16T16:48:01.745


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...
  Activating project at `~/.julia/environments/v1.14`

Set-up completed after 10.31s


################################################################################
# Installation
#

Installing Erdos...
   Resolving package versions...
    Updating `~/.julia/environments/v1.14/Project.toml`
  [90d7349d] + Erdos v0.8.4
    Updating `~/.julia/environments/v1.14/Manifest.toml`
  [1520ce14] + AbstractTrees v0.4.5
  [66dad0bd] + AliasTables v1.1.3
  [7d9fca2a] + Arpack v0.5.4
⌅ [aaaa29a8] + Clustering v0.14.4
  [34da2185] + Compat v4.18.1
  [9a962f9c] + DataAPI v1.16.0
⌅ [864edb3b] + DataStructures v0.18.22
  [b4f34e82] + Distances v0.10.12
  [31c24e10] + Distributions v0.25.122
  [ffbed154] + DocStringExtensions v0.9.5
  [90d7349d] + Erdos v0.8.4
  [8f5d6c58] + EzXML v1.2.3
  [1a297f60] + FillArrays v1.15.0
⌅ [92fee26a] + GZip v0.5.2
  [34004b35] + HypergeometricFunctions v0.3.28
  [92d709cd] + IrrationalConstants v0.2.6
  [c8e1da08] + IterTools v1.10.0
  [692b3bcd] + JLLWrappers v1.7.1
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [e1d29d7a] + Missings v1.2.0
  [b8a86587] + NearestNeighbors v0.4.26
  [bac558e1] + OrderedCollections v1.8.1
⌃ [90014a1f] + PDMats v0.11.35
  [aea7be01] + PrecompileTools v1.3.3
  [21216c6a] + Preferences v1.5.0
  [43287f4e] + PtrArrays v1.3.0
  [1fd47b50] + QuadGK v2.11.2
  [189a3867] + Reexport v1.2.2
  [79098fc4] + Rmath v0.9.0
  [a2af1166] + SortingAlgorithms v1.2.2
  [276daf66] + SpecialFunctions v2.6.1
  [90137ffa] + StaticArrays v1.9.15
  [1e83bf80] + StaticArraysCore v1.4.4
  [10745b16] + Statistics v1.11.1
  [82ae8749] + StatsAPI v1.8.0
⌅ [2913bbd2] + StatsBase v0.33.21
  [4c63d2b9] + StatsFuns v1.5.2
⌅ [68821587] + Arpack_jll v3.5.2+0
  [94ce4f54] + Libiconv_jll v1.18.0+0
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
  [f50d1b31] + Rmath_jll v0.5.1+0
  [02c8fc9c] + XML2_jll v2.15.1+0
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.13.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v1.0.0
  [9e88b42a] + Serialization v1.11.0
  [2f01184e] + SparseArrays v1.13.0
  [f489334b] + StyledStrings v1.13.0
  [4607b0f0] + SuiteSparse
  [fa267f1f] + TOML v1.0.3
  [8dfed614] + Test v1.11.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [05823500] + OpenLibm_jll v0.8.7+0
  [bea87d4a] + SuiteSparse_jll v7.10.1+0
  [83775a58] + Zlib_jll v1.3.1+2
  [8e850b90] + libblastrampoline_jll v5.15.0+0
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m`

Installation completed after 4.89s


################################################################################
# Precompilation
#

ERROR: LoadError: MethodError: no method matching setindex!(::Base.ScopedValues.ScopedValue{IO}, ::Nothing)
The function `setindex!` exists, but no method is defined for this combination of argument types.
Stacktrace:
 [1] top-level scope
   @ /PkgEval.jl/scripts/precompile.jl:10
 [2] include(mod::Module, _path::String)
   @ Base ./Base.jl:309
 [3] exec_options(opts::Base.JLOptions)
   @ Base ./client.jl:344
 [4] _start()
   @ Base ./client.jl:577
in expression starting at /PkgEval.jl/scripts/precompile.jl:6

caused by: MethodError: no method matching setindex!(::Base.ScopedValues.ScopedValue{IO}, ::Base.DevNull)
The function `setindex!` exists, but no method is defined for this combination of argument types.
Stacktrace:
 [1] top-level scope
   @ /PkgEval.jl/scripts/precompile.jl:7
 [2] include(mod::Module, _path::String)
   @ Base ./Base.jl:309
 [3] exec_options(opts::Base.JLOptions)
   @ Base ./client.jl:344
 [4] _start()
   @ Base ./client.jl:577

Precompilation failed after 14.52s



################################################################################
# Testing
#

     Testing Erdos
      Status `/tmp/jl_Lx5nCL/Project.toml`
  [7d9fca2a] Arpack v0.5.4
⌅ [aaaa29a8] Clustering v0.14.4
⌅ [864edb3b] DataStructures v0.18.22
  [31c24e10] Distributions v0.25.122
  [90d7349d] Erdos v0.8.4
  [8f5d6c58] EzXML v1.2.3
⌅ [92fee26a] GZip v0.5.2
  [c8e1da08] IterTools v1.10.0
  [10745b16] Statistics v1.11.1
  [ade2ca70] Dates v1.11.0
  [37e2e46d] LinearAlgebra v1.13.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [2f01184e] SparseArrays v1.13.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_Lx5nCL/Manifest.toml`
  [1520ce14] AbstractTrees v0.4.5
  [66dad0bd] AliasTables v1.1.3
  [7d9fca2a] Arpack v0.5.4
⌅ [aaaa29a8] Clustering v0.14.4
  [34da2185] Compat v4.18.1
  [9a962f9c] DataAPI v1.16.0
⌅ [864edb3b] DataStructures v0.18.22
  [b4f34e82] Distances v0.10.12
  [31c24e10] Distributions v0.25.122
  [ffbed154] DocStringExtensions v0.9.5
  [90d7349d] Erdos v0.8.4
  [8f5d6c58] EzXML v1.2.3
  [1a297f60] FillArrays v1.15.0
⌅ [92fee26a] GZip v0.5.2
  [34004b35] HypergeometricFunctions v0.3.28
  [92d709cd] IrrationalConstants v0.2.6
  [c8e1da08] IterTools v1.10.0
  [692b3bcd] JLLWrappers v1.7.1
  [2ab3a3ac] LogExpFunctions v0.3.29
  [e1d29d7a] Missings v1.2.0
  [b8a86587] NearestNeighbors v0.4.26
  [bac558e1] OrderedCollections v1.8.1
⌃ [90014a1f] PDMats v0.11.35
  [aea7be01] PrecompileTools v1.3.3
  [21216c6a] Preferences v1.5.0
  [43287f4e] PtrArrays v1.3.0
  [1fd47b50] QuadGK v2.11.2
  [189a3867] Reexport v1.2.2
  [79098fc4] Rmath v0.9.0
  [a2af1166] SortingAlgorithms v1.2.2
  [276daf66] SpecialFunctions v2.6.1
  [90137ffa] StaticArrays v1.9.15
  [1e83bf80] StaticArraysCore v1.4.4
  [10745b16] Statistics v1.11.1
  [82ae8749] StatsAPI v1.8.0
⌅ [2913bbd2] StatsBase v0.33.21
  [4c63d2b9] StatsFuns v1.5.2
⌅ [68821587] Arpack_jll v3.5.2+0
  [94ce4f54] Libiconv_jll v1.18.0+0
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
  [f50d1b31] Rmath_jll v0.5.1+0
  [02c8fc9c] XML2_jll v2.15.1+0
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.13.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v1.0.0
  [9e88b42a] Serialization v1.11.0
  [2f01184e] SparseArrays v1.13.0
  [f489334b] StyledStrings v1.13.0
  [4607b0f0] SuiteSparse
  [fa267f1f] TOML v1.0.3
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.3.0+1
  [4536629a] OpenBLAS_jll v0.3.29+0
  [05823500] OpenLibm_jll v0.8.7+0
  [bea87d4a] SuiteSparse_jll v7.10.1+0
  [83775a58] Zlib_jll v1.3.1+2
  [8e850b90] libblastrampoline_jll v5.15.0+0
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading.
     Testing Running tests...
WARNING: method definition for #neighborhood_dists#45 at /home/pkgeval/.julia/packages/Erdos/Ot3Kr/src/traversals/connectivity.jl:504 declares type variable U but does not use it.

  1 dependency had output during precompilation:
┌ Erdos
│  [Output was shown above]
└  
Test Summary:         | Pass  Total  Time
factory/graph Network |   19     19  7.9s
Test Summary:       | Pass  Total  Time
factory/net Network |   16     16  0.4s
Test Summary:     | Pass  Total  Time
core/edge Network |    9      9  0.2s
Test Summary:                | Pass  Total  Time
core/interface_graph Network |   26     26  0.8s
Test Summary:                  | Pass  Total  Time
core/interface_network Network |   11     11  1.9s
Test Summary:     | Pass  Total  Time
core/core Network |  348    348  8.1s
Test Summary:         | Pass  Total  Time
core/edgeiter Network |   54     54  0.7s
Test Summary:          | Pass  Total  Time
maps/vertexmap Network |   37     37  1.0s
Test Summary:        | Pass  Total  Time
maps/edgemap Network |  226    226  6.7s
Test Summary:               | Pass  Total  Time
maps/property_store Network |   36     36  1.3s
Test Summary:               | Pass  Total  Time
operators/operators Network |  104    104  9.5s
Test Summary:              | Pass  Total  Time
distances/distance Network |   12     12  4.3s
Test Summary:                   | Pass  Total  Time
distances/edit_distance Network |   14     14  2.3s

linalg/spectral Network: Error During Test at /home/pkgeval/.julia/packages/Erdos/Ot3Kr/test/linalg/spectral.jl:12
  Test threw exception
  Expression: (adjacency_matrix(g))[1, 1] == 2
  ArgumentError: Invalid buffers for SparseMatrixCSC construction n=5, colptr=6-element Vector{Int64}, rowval=9-element Vector{Int64}, nzval=10-element Vector{Int64}
  Stacktrace:
   [1] SparseMatrixCSC
     @ /opt/julia/share/julia/stdlib/v1.14/SparseArrays/src/sparsematrix.jl:29 [inlined]
   [2] SparseMatrixCSC(m::Int64, n::Int64, colptr::Vector{Int64}, rowval::Vector{Int64}, nzval::Vector{Int64})
     @ SparseArrays /opt/julia/share/julia/stdlib/v1.14/SparseArrays/src/sparsematrix.jl:44
   [3] adjacency_matrix(g::Network, dir::Symbol, T::DataType)
     @ Erdos ~/.julia/packages/Erdos/Ot3Kr/src/linalg/spectral.jl:51
   [4] adjacency_matrix
     @ ~/.julia/packages/Erdos/Ot3Kr/src/linalg/spectral.jl:64 [inlined]
   [5] adjacency_matrix(g::Network)
     @ Erdos ~/.julia/packages/Erdos/Ot3Kr/src/linalg/spectral.jl:64
   [6] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:750 [inlined]
   [7] macro expansion
     @ ~/.julia/packages/Erdos/Ot3Kr/test/linalg/spectral.jl:12 [inlined]
   [8] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined]
   [9] top-level scope
     @ ~/.julia/packages/Erdos/Ot3Kr/test/linalg/spectral.jl:3
Test Summary:           | Pass  Error  Total   Time
linalg/spectral Network |   70      1     71  27.2s
RNG of the outermost testset: Xoshiro(0x879f69b27dccbef5, 0x808ab91d63a54aee, 0xf7b836cfa2e9577c, 0xbc73435ac9f8d6e5, 0x06ff7e945d19356e)
ERROR: LoadError: Some tests did not pass: 70 passed, 0 failed, 1 errored, 0 broken.
in expression starting at /home/pkgeval/.julia/packages/Erdos/Ot3Kr/test/linalg/spectral.jl:1
in expression starting at /home/pkgeval/.julia/packages/Erdos/Ot3Kr/test/runtests.jl:78

Testing failed after 108.3s

ERROR: LoadError: Package Erdos errored during testing
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3067
  [3] test
    @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2916 [inlined]
  [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:572
  [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:548
  [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172
  [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161
  [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160
  [9] test
    @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined]
 [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String)
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159
 [11] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:237
 [12] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [13] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:344
 [14] _start()
    @ Base ./client.jl:577
in expression starting at /PkgEval.jl/scripts/evaluate.jl:228

PkgEval failed after 159.67s: package tests unexpectedly errored