Package evaluation to test ACSets on Julia 1.14.0-DEV.1372 (893635dc59*) started at 2025-12-16T15:22:12.595 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.14` Set-up completed after 9.11s ################################################################################ # Installation # Installing ACSets... Resolving package versions... ┌ Warning: tarball content of url https://api.github.com/repos/AlgebraicJulia/ACSets.jl/tarball/80ca69d6844aa5a1e67338b5362e393007c4c168 does not match git-tree-sha1, expected 80ca69d6844aa5a1e67338b5362e393007c4c168, got UInt8[0xd1, 0x1b, 0xa5, 0x13, 0x1c, 0x10, 0xde, 0x7a, 0x07, 0x55, 0x00, 0x30, 0xe6, 0x80, 0xaf, 0xa0, 0x1e, 0x32, 0xbf, 0xfb] └ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:1176 Cloning [227ef7b5-1206-438b-ac65-934d6da304b8] ACSets from https://github.com/AlgebraicJulia/ACSets.jl.git Installed ACSets ─ v0.2.26 Updating `~/.julia/environments/v1.14/Project.toml` [227ef7b5] + ACSets v0.2.26 Updating `~/.julia/environments/v1.14/Manifest.toml` [227ef7b5] + ACSets v0.2.26 [23cfdc9f] + AlgebraicInterfaces v0.1.4 [861a8166] + Combinatorics v1.1.0 [0fb5dd42] + CompTime v0.1.2 [34da2185] + Compat v4.18.1 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 ⌅ [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [0f8b85d8] + JSON3 v1.14.3 [b964fa9f] + LaTeXStrings v1.4.0 [d8e11817] + MLStyle v0.4.17 [1914dd2f] + MacroTools v0.5.16 [bac558e1] + OrderedCollections v1.8.1 [12d937ae] + PEG v1.0.4 [69de0a69] + Parsers v2.8.3 [2ae35dd2] + Permutations v0.4.23 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 ⌅ [08abe8d2] + PrettyTables v2.4.0 [189a3867] + Reexport v1.2.2 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.4 [892a3eda] + StringManipulation v0.4.2 [6ec83bb0] + StructEquality v2.1.0 [856f2bd8] + StructTypes v1.11.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.13.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.14.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [f489334b] + StyledStrings v1.13.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.17.0+0 [e37daf67] + LibGit2_jll v1.9.2+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.12.2 [4536629a] + OpenBLAS_jll v0.3.29+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.68.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 4.96s ################################################################################ # Precompilation # ERROR: LoadError: MethodError: no method matching setindex!(::Base.ScopedValues.ScopedValue{IO}, ::Nothing) The function `setindex!` exists, but no method is defined for this combination of argument types. Stacktrace: [1] top-level scope @ /PkgEval.jl/scripts/precompile.jl:10 [2] include(mod::Module, _path::String) @ Base ./Base.jl:309 [3] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [4] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/precompile.jl:6 caused by: MethodError: no method matching setindex!(::Base.ScopedValues.ScopedValue{IO}, ::Base.DevNull) The function `setindex!` exists, but no method is defined for this combination of argument types. Stacktrace: [1] top-level scope @ /PkgEval.jl/scripts/precompile.jl:7 [2] include(mod::Module, _path::String) @ Base ./Base.jl:309 [3] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [4] _start() @ Base ./client.jl:577 Precompilation failed after 12.64s ################################################################################ # Testing # Testing ACSets Status `/tmp/jl_ayMMuw/Project.toml` [227ef7b5] ACSets v0.2.26 [992eb4ea] CondaPkg v0.2.33 [a93c6f00] DataFrames v1.8.1 [682c06a0] JSON v1.3.0 [0f8b85d8] JSON3 v1.14.3 [7d188eb4] JSONSchema v1.5.0 [494afd89] JavaCall v0.8.1 [d8e11817] MLStyle v0.4.17 [bac558e1] OrderedCollections v1.8.1 [2ae35dd2] Permutations v0.4.23 [6099a3de] PythonCall v0.9.30 [90137ffa] StaticArrays v1.9.15 [bd369af6] Tables v1.12.1 [fdbf4ff8] XLSX v0.10.4 [55c6dc9b] nauty_jll v2.8.10+1 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_ayMMuw/Manifest.toml` [227ef7b5] ACSets v0.2.26 [23cfdc9f] AlgebraicInterfaces v0.1.4 [dce04be8] ArgCheck v2.5.0 [6309b1aa] CodecInflate64 v0.1.3 [944b1d66] CodecZlib v0.7.8 [861a8166] Combinatorics v1.1.0 [0fb5dd42] CompTime v0.1.2 [34da2185] Compat v4.18.1 [992eb4ea] CondaPkg v0.2.33 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [8f5d6c58] EzXML v1.2.3 [842dd82b] InlineStrings v1.4.5 [0c81fc1b] InputBuffers v1.1.1 [41ab1584] InvertedIndices v1.3.1 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v1.3.0 [0f8b85d8] JSON3 v1.14.3 [7d188eb4] JSONSchema v1.5.0 [494afd89] JavaCall v0.8.1 [b964fa9f] LaTeXStrings v1.4.0 [d8e11817] MLStyle v0.4.17 [1914dd2f] MacroTools v0.5.16 [0b3b1443] MicroMamba v0.1.14 [e1d29d7a] Missings v1.2.0 [bac558e1] OrderedCollections v1.8.1 [12d937ae] PEG v1.0.4 [69de0a69] Parsers v2.8.3 [2ae35dd2] Permutations v0.4.23 [fa939f87] Pidfile v1.3.0 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 ⌅ [08abe8d2] PrettyTables v2.4.0 [6099a3de] PythonCall v0.9.30 [189a3867] Reexport v1.2.2 [6c6a2e73] Scratch v1.3.0 [91c51154] SentinelArrays v1.4.8 [a2af1166] SortingAlgorithms v1.2.2 [90137ffa] StaticArrays v1.9.15 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [892a3eda] StringManipulation v0.4.2 [6ec83bb0] StructEquality v2.1.0 [856f2bd8] StructTypes v1.11.0 [ec057cc2] StructUtils v2.6.0 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [3bb67fe8] TranscodingStreams v0.11.3 [5c2747f8] URIs v1.6.1 [e17b2a0c] UnsafePointers v1.0.0 [1b915085] WinReg v1.0.0 [fdbf4ff8] XLSX v0.10.4 [49080126] ZipArchives v2.6.0 [a5390f91] ZipFile v0.10.1 [94ce4f54] Libiconv_jll v1.18.0+0 [02c8fc9c] XML2_jll v2.15.1+0 ⌅ [f8abcde7] micromamba_jll v1.5.12+0 [55c6dc9b] nauty_jll v2.8.10+1 [4d7b5844] pixi_jll v0.41.3+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.13.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.14.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [f489334b] StyledStrings v1.13.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [781609d7] GMP_jll v6.3.0+2 [deac9b47] LibCURL_jll v8.17.0+0 [e37daf67] LibGit2_jll v1.9.2+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.12.2 [4536629a] OpenBLAS_jll v0.3.29+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.47.0+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.68.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Test Summary: | Pass Total Time Utilities | 7 7 55.1s Test Summary: | Pass Total Time Mappings | 30 30 2.2s Test Summary: | Pass Total Time Columns | 84 84 9.1s Test Summary: | Pass Total Time Schemas | 30 30 6.1s Test Summary: | Pass Total Time ACSets | 1093 1093 3m10.2s Test Summary: | Pass Total Time Parsers | 38 38 15.8s Test Summary: | Pass Total Time Serialization | 23 23 2m01.3s ┌ Warning: JavaCall needs the environment variable `JULIA_COPY_STACKS` to be `1` or `yes`. │ Calling the JVM may result in undefined behavior. └ @ JavaCall ~/.julia/packages/JavaCall/sPJJR/src/JavaCall.jl:57 ┌ Warning: Conversion to OrderedDict is deprecated for unordered associative containers (in this case, Dict{Symbol, Any}). Use an ordered or sorted associative type, such as SortedDict and OrderedDict. │ caller = Object at InterTypes.jl:237 [inlined] └ @ Core ~/.julia/packages/ACSets/MhuDr/src/intertypes/InterTypes.jl:237 ┌ Warning: The call to compilecache failed to create a usable precompiled cache file for PythonCall [6099a3de-0909-46bc-b1f4-468b9a2dfc0d] │ exception = Required dependency Base.PkgId(Base.UUID("e17b2a0c-0bdf-430a-bd0c-3a23cae4ff39"), "UnsafePointers") failed to load from a cache file. └ @ Base loading.jl:2891 InterTypes: Error During Test at /home/pkgeval/.julia/packages/ACSets/MhuDr/test/runtests.jl:31 Got exception outside of a @test LoadError: InitError: UndefVarError: `manifest_uuid_path` not defined in `Base` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] getproperty(x::Module, f::Symbol) @ Base ./Base_compiler.jl:50 [2] _resolve_top_env(load_path::Any) @ CondaPkg ~/.julia/packages/CondaPkg/0UqYV/src/resolve.jl:10 [3] resolve(; force::Bool, io::IO, interactive::Bool, dry_run::Bool) @ CondaPkg ~/.julia/packages/CondaPkg/0UqYV/src/resolve.jl:823 [4] resolve() @ CondaPkg ~/.julia/packages/CondaPkg/0UqYV/src/resolve.jl:796 [5] envdir() @ CondaPkg ~/.julia/packages/CondaPkg/0UqYV/src/env.jl:70 [6] init_context() @ PythonCall.C ~/.julia/packages/PythonCall/wkBj7/src/C/context.jl:135 [7] __init__() @ PythonCall.C ~/.julia/packages/PythonCall/wkBj7/src/C/C.jl:26 [8] include(mod::Module, _path::String) @ Base ./Base.jl:309 [9] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2914 [10] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2665 [11] macro expansion @ ./loading.jl:2593 [inlined] [12] macro expansion @ ./lock.jl:376 [inlined] [13] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2557 [14] require @ ./loading.jl:2533 [inlined] [15] eval_import_path @ ./module.jl:36 [inlined] [16] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [17] _eval_using @ ./module.jl:137 [inlined] [18] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [19] top-level scope @ ~/.julia/packages/ACSets/MhuDr/test/intertypes/InterTypes.jl:142 [20] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [21] top-level scope @ ~/.julia/packages/ACSets/MhuDr/test/runtests.jl:32 [22] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [23] macro expansion @ ~/.julia/packages/ACSets/MhuDr/test/runtests.jl:32 [inlined] [24] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [25] top-level scope @ none:6 [26] eval(m::Module, e::Any) @ Core ./boot.jl:489 [27] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [28] _start() @ Base ./client.jl:577 during initialization of module C in expression starting at /home/pkgeval/.julia/packages/PythonCall/wkBj7/src/PythonCall.jl:1 in expression starting at /home/pkgeval/.julia/packages/ACSets/MhuDr/test/intertypes/InterTypes.jl:1 Test Summary: | Pass Error Total Time InterTypes | 30 1 31 1m56.2s RNG of the outermost testset: Random.Xoshiro(0x3ad239b68593364a, 0x2a898a7cf1508051, 0xe26616e3347878c6, 0x5fdd5228834cfb79, 0xc57a8ab8f6f9f36a) ERROR: LoadError: Some tests did not pass: 30 passed, 0 failed, 1 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/ACSets/MhuDr/test/runtests.jl:31 Testing failed after 525.59s ERROR: LoadError: Package ACSets errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:3067 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2916 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:572 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:548 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:237 [12] include(mod::Module, _path::String) @ Base ./Base.jl:309 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:228 PkgEval failed after 575.66s: package tests unexpectedly errored