Package evaluation to test ReefModEngine on Julia 1.14.0-DEV.1299 (6d6224db99*) started at 2025-11-27T23:33:20.200 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.57s ################################################################################ # Installation # Installing ReefModEngine... Resolving package versions... Installed Glob ──────────────────────── v1.3.1 Installed OnlineStatsBase ───────────── v1.7.1 Installed NetCDF_jll ────────────────── v400.902.211+1 Installed DiffResults ───────────────── v1.1.0 Installed ForwardDiff ───────────────── v1.3.0 Installed MacroTools ────────────────── v0.5.16 Installed FilePathsBase ─────────────── v0.9.24 Installed DataStructures ────────────── v0.18.22 Installed DiskArrays ────────────────── v0.3.23 Installed Rmath_jll ─────────────────── v0.5.1+0 Installed Bzip2_jll ─────────────────── v1.0.9+0 Installed AbstractTrees ─────────────── v0.4.5 Installed InlineStrings ─────────────── v1.4.5 Installed FillArrays ────────────────── v1.15.0 Installed Lz4_jll ───────────────────── v1.10.1+0 Installed ReefModEngine ─────────────── v1.5.0 Installed Adapt ─────────────────────── v4.4.0 Installed libaec_jll ────────────────── v1.1.4+0 Installed Extents ───────────────────── v0.1.6 Installed HypergeometricFunctions ───── v0.3.28 Installed ConstructionBase ──────────── v1.6.0 Installed MPICH_jll ─────────────────── v4.3.2+0 Installed CFTime ────────────────────── v0.1.4 Installed AliasTables ───────────────── v1.1.3 Installed CodecZlib ─────────────────── v0.7.8 Installed StatsBase ─────────────────── v0.34.8 Installed TranscodingStreams ────────── v0.11.3 Installed ArrayInterface ────────────── v7.22.0 Installed Optim ─────────────────────── v1.13.3 Installed OrderedCollections ────────── v1.8.1 Installed MicrosoftMPI_jll ──────────── v10.1.4+3 Installed Compat ────────────────────── v4.18.1 Installed DiskArrayTools ────────────── v0.1.11 Installed WeightedOnlineStats ───────── v0.6.3 Installed RecipesBase ───────────────── v1.3.4 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed DataAPI ───────────────────── v1.16.0 Installed Statistics ────────────────── v1.11.1 Installed InvertedIndices ───────────── v1.3.1 Installed PositiveFactorizations ────── v0.2.4 Installed Xorg_libpciaccess_jll ─────── v0.18.1+0 Installed DataValueInterfaces ───────── v1.0.0 Installed StatsAPI ──────────────────── v1.7.1 Installed PrecompileTools ───────────── v1.3.3 Installed OffsetArrays ──────────────── v1.17.0 Installed CommonSubexpressions ──────── v0.3.1 Installed ProgressMeter ─────────────── v1.11.0 Installed SentinelArrays ────────────── v1.4.8 Installed Blosc_jll ─────────────────── v1.21.7+0 Installed StaticArrays ──────────────── v1.9.15 Installed StaticArraysCore ──────────── v1.4.4 Installed IrrationalConstants ───────── v0.2.6 Installed NetCDF ────────────────────── v0.11.8 Installed ChainRulesCore ────────────── v1.26.0 Installed QuadGK ────────────────────── v2.11.2 Installed Ratios ────────────────────── v0.4.5 Installed AxisAlgorithms ────────────── v1.1.0 Installed DimensionalData ───────────── v0.29.25 Installed StringManipulation ────────── v0.4.2 Installed libzip_jll ────────────────── v1.11.3+0 Installed NaNMath ───────────────────── v1.1.3 Installed Requires ──────────────────── v1.3.1 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed OpenMPI_jll ───────────────── v4.1.8+1 Installed LogExpFunctions ───────────── v0.3.29 Installed DiffRules ─────────────────── v1.15.1 Installed HDF5_jll ──────────────────── v1.14.3+3 Installed Interpolations ────────────── v0.15.1 Installed PrettyTables ──────────────── v3.1.2 Installed Interfaces ────────────────── v0.3.2 Installed JSON ──────────────────────── v0.21.4 Installed Hwloc_jll ─────────────────── v2.12.2+0 Installed CSV ───────────────────────── v0.10.15 Installed Parsers ───────────────────── v2.8.3 Installed Distributions ─────────────── v0.25.122 Installed Rmath ─────────────────────── v0.9.0 Installed FiniteDiff ────────────────── v2.29.0 Installed SplittablesBase ───────────── v0.1.15 Installed WoodburyMatrices ──────────── v1.0.0 Installed StatsFuns ─────────────────── v1.5.2 Installed Tables ────────────────────── v1.12.1 Installed PtrArrays ─────────────────── v1.3.0 Installed XML2_jll ──────────────────── v2.13.9+0 Installed EnumX ─────────────────────── v1.0.5 Installed NLSolversBase ─────────────── v7.10.0 Installed YAXArrayBase ──────────────── v0.7.6 Installed SpecialFunctions ──────────── v2.6.1 Installed IntervalSets ──────────────── v0.7.13 Installed Reexport ──────────────────── v1.2.2 Installed Setfield ──────────────────── v1.1.2 Installed DataFrames ────────────────── v1.8.1 Installed Missings ──────────────────── v1.2.0 Installed Preferences ───────────────── v1.5.0 Installed MPIPreferences ────────────── v0.1.11 Installed Libiconv_jll ──────────────── v1.18.0+0 Installed ParallelUtilities ─────────── v0.8.6 Installed WeakRefStrings ────────────── v1.4.2 Installed PooledArrays ──────────────── v1.4.3 Installed JLLWrappers ───────────────── v1.7.1 Installed LaTeXStrings ──────────────── v1.4.0 Installed LineSearches ──────────────── v7.5.1 Installed TableTraits ───────────────── v1.0.1 Installed XZ_jll ────────────────────── v5.8.1+0 Installed SortingAlgorithms ─────────── v1.2.2 Installed LRUCache ──────────────────── v1.6.2 Installed PDMats ────────────────────── v0.11.36 Installed MPItrampoline_jll ─────────── v5.5.4+0 Installed Crayons ───────────────────── v4.1.1 Installed IterTools ─────────────────── v1.10.0 Installed WorkerUtilities ───────────── v1.6.1 Installed ADTypes ───────────────────── v1.19.0 Installed OnlineStats ───────────────── v1.7.2 Installed DocStringExtensions ───────── v0.9.5 Installed DifferentiationInterface ──── v0.7.12 Installed YAXArrays ─────────────────── v0.5.14 Installing 15 artifacts Installed artifact Rmath 121.9 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact libzip 177.6 KiB Installed artifact Xorg_libpciaccess 24.8 KiB Installed artifact libaec 49.6 KiB Installed artifact NetCDF 901.2 KiB Installed artifact Hwloc 3.5 MiB Installed artifact Blosc 44.2 KiB Installed artifact XZ 1.5 MiB Installed artifact Libiconv 1.9 MiB Installed artifact Bzip2 503.5 KiB Installed artifact Lz4 239.7 KiB Installed artifact XML2 2.5 MiB Installed artifact HDF5 5.3 MiB Installed artifact MPICH 3.3 MiB Updating `~/.julia/environments/v1.14/Project.toml` [f4ffb74a] + ReefModEngine v1.5.0 Updating `~/.julia/environments/v1.14/Manifest.toml` [47edcb42] + ADTypes v1.19.0 [1520ce14] + AbstractTrees v0.4.5 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.22.0 [13072b0f] + AxisAlgorithms v1.1.0 ⌅ [179af706] + CFTime v0.1.4 [336ed68f] + CSV v0.10.15 [d360d2e6] + ChainRulesCore v1.26.0 [944b1d66] + CodecZlib v0.7.8 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.18.1 [187b0558] + ConstructionBase v1.6.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 ⌅ [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.12 [0703355e] + DimensionalData v0.29.25 ⌃ [fcd2136c] + DiskArrayTools v0.1.11 ⌅ [3c3547ce] + DiskArrays v0.3.23 [31c24e10] + Distributions v0.25.122 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.5 [411431e0] + Extents v0.1.6 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.15.0 [6a86dc24] + FiniteDiff v2.29.0 [f6369f11] + ForwardDiff v1.3.0 [c27321d9] + Glob v1.3.1 [34004b35] + HypergeometricFunctions v0.3.28 [842dd82b] + InlineStrings v1.4.5 [85a1e053] + Interfaces v0.3.2 ⌅ [a98d9a8b] + Interpolations v0.15.1 [8197267c] + IntervalSets v0.7.13 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 ⌅ [682c06a0] + JSON v0.21.4 [8ac3fa9e] + LRUCache v1.6.2 [b964fa9f] + LaTeXStrings v1.4.0 [d3d80556] + LineSearches v7.5.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.3 ⌅ [30363a11] + NetCDF v0.11.8 [6fe1bfb0] + OffsetArrays v1.17.0 [a15396b6] + OnlineStats v1.7.2 [925886fa] + OnlineStatsBase v1.7.1 [429524aa] + Optim v1.13.3 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.36 [fad6cfc8] + ParallelUtilities v0.8.6 [69de0a69] + Parsers v2.8.3 [2dfb63ee] + PooledArrays v1.4.3 [85a6dd25] + PositiveFactorizations v0.2.4 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [08abe8d2] + PrettyTables v3.1.2 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [c84ed2f1] + Ratios v0.4.5 [3cdcf5f2] + RecipesBase v1.3.4 [f4ffb74a] + ReefModEngine v1.5.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [91c51154] + SentinelArrays v1.4.8 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [171d559e] + SplittablesBase v0.1.15 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.8 [4c63d2b9] + StatsFuns v1.5.2 [892a3eda] + StringManipulation v0.4.2 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [3bb67fe8] + TranscodingStreams v0.11.3 [ea10d353] + WeakRefStrings v1.4.2 [bbac0a1f] + WeightedOnlineStats v0.6.3 [efce3f68] + WoodburyMatrices v1.0.0 [76eceee3] + WorkerUtilities v1.6.1 [90b8fcef] + YAXArrayBase v0.7.6 ⌅ [c21b50f5] + YAXArrays v0.5.14 [0b7ba130] + Blosc_jll v1.21.7+0 [6e34b625] + Bzip2_jll v1.0.9+0 ⌅ [0234f1f7] + HDF5_jll v1.14.3+3 [e33a78d0] + Hwloc_jll v2.12.2+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [5ced341a] + Lz4_jll v1.10.1+0 [7cb0a576] + MPICH_jll v4.3.2+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 ⌅ [7243133f] + NetCDF_jll v400.902.211+1 ⌅ [fe0851c0] + OpenMPI_jll v4.1.8+1 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [ffd25f8a] + XZ_jll v5.8.1+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0 [477f73a3] + libaec_jll v1.1.4+0 [337d8026] + libzip_jll v1.11.3+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.17.0+0 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.68.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 18.36s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... WARNING: Imported binding Operations.project_rel_path was undeclared at import time during import to TestEnv. 4570.4 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. 1 dependency had output during precompilation: ┌ TestEnv │ WARNING: Imported binding Operations.project_rel_path was undeclared at import time during import to TestEnv. └ ┌ Error: Failed to use TestEnv.jl; test dependencies will not be precompiled │ exception = │ UndefVarError: `project_rel_path` not defined in `TestEnv` │ Suggestion: this global was defined as `Pkg.Operations.project_rel_path` but not assigned a value. │ Stacktrace: │ [1] get_test_dir(ctx::Pkg.Types.Context, pkgspec::PackageSpec) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:75 │ [2] test_dir_has_project_file │ @ ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:52 [inlined] │ [3] maybe_gen_project_override! │ @ ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:83 [inlined] │ [4] activate(pkg::String; allow_reresolve::Bool) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/activate_set.jl:12 │ [5] activate(pkg::String) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/activate_set.jl:9 │ [6] top-level scope │ @ /PkgEval.jl/scripts/precompile.jl:24 │ [7] include(mod::Module, _path::String) │ @ Base ./Base.jl:309 │ [8] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:344 │ [9] _start() │ @ Base ./client.jl:577 └ @ Main /PkgEval.jl/scripts/precompile.jl:26 Precompiling package dependencies... Precompiling packages... 4260.0 ms ✓ MacroTools 1661.9 ms ✓ InlineStrings 757.2 ms ✓ Reexport 1114.7 ms ✓ ConstructionBase 2025.0 ms ✓ IrrationalConstants 760.1 ms ✓ DataValueInterfaces 848.7 ms ✓ StatsAPI 1120.7 ms ✓ IterTools 1025.8 ms ✓ IntervalSets 1264.1 ms ✓ TranscodingStreams 824.6 ms ✓ LaTeXStrings 881.3 ms ✓ Glob 932.8 ms ✓ Interfaces 1076.9 ms ✓ Statistics 977.8 ms ✓ StaticArraysCore 1003.0 ms ✓ LRUCache 787.5 ms ✓ PtrArrays 910.7 ms ✓ PositiveFactorizations 812.6 ms ✓ DataAPI 844.0 ms ✓ InvertedIndices 1080.1 ms ✓ AbstractTrees 856.6 ms ✓ EnumX 995.6 ms ✓ WorkerUtilities 2033.4 ms ✓ FillArrays 1010.4 ms ✓ Extents 1218.7 ms ✓ OrderedCollections 1328.3 ms ✓ ADTypes 1114.6 ms ✓ DocStringExtensions 1567.7 ms ✓ OffsetArrays 792.1 ms ✓ IteratorInterfaceExtensions 1861.2 ms ✓ Crayons 1002.4 ms ✓ NaNMath 1179.0 ms ✓ Requires 1236.1 ms ✓ SuiteSparse 1390.2 ms ✓ WoodburyMatrices 2770.6 ms ✓ SentinelArrays 1436.7 ms ✓ CFTime 1846.4 ms ✓ ProgressMeter 1165.7 ms ✓ Compat 1140.4 ms ✓ Preferences 1700.2 ms ✓ CommonSubexpressions 830.9 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 795.6 ms ✓ IntervalSets → IntervalSetsRandomExt 738.8 ms ✓ ConstructionBase → ConstructionBaseIntervalSetsExt 984.2 ms ✓ CodecZlib 1341.7 ms ✓ Statistics → SparseArraysExt 737.6 ms ✓ IntervalSets → IntervalSetsStatisticsExt 871.1 ms ✓ DiffResults 796.7 ms ✓ LRUCache → SerializationExt 957.7 ms ✓ AliasTables 991.0 ms ✓ Missings 995.5 ms ✓ PooledArrays 1442.5 ms ✓ FillArrays → FillArraysSparseArraysExt 902.0 ms ✓ FillArrays → FillArraysStatisticsExt 723.3 ms ✓ ADTypes → ADTypesConstructionBaseExt 1820.7 ms ✓ DifferentiationInterface 1332.0 ms ✓ LogExpFunctions 1899.0 ms ✓ DiskArrays 711.4 ms ✓ TableTraits 883.9 ms ✓ Ratios 892.4 ms ✓ Adapt 1863.0 ms ✓ PDMats 1394.8 ms ✓ AxisAlgorithms 802.8 ms ✓ Compat → CompatLinearAlgebraExt 908.3 ms ✓ PrecompileTools 1122.8 ms ✓ JLLWrappers 1400.8 ms ✓ MPIPreferences 2924.5 ms ✓ Setfield 1299.3 ms ✓ DifferentiationInterface → DifferentiationInterfaceSparseArraysExt 1748.7 ms ✓ Tables 1123.5 ms ✓ ArrayInterface 1279.1 ms ✓ Adapt → AdaptSparseArraysExt 771.8 ms ✓ OffsetArrays → OffsetArraysAdaptExt 1439.0 ms ✓ FillArrays → FillArraysPDMatsExt 2626.4 ms ✓ ChainRulesCore 2021.6 ms ✓ FilePathsBase 4039.1 ms ✓ DataStructures 3206.9 ms ✓ StringManipulation 13429.8 ms ✓ StaticArrays 2797.9 ms ✓ RecipesBase 16290.2 ms ✓ Parsers 1380.4 ms ✓ Bzip2_jll 1386.3 ms ✓ Lz4_jll 1421.8 ms ✓ XZ_jll 1375.5 ms ✓ Rmath_jll 1186.6 ms ✓ MicrosoftMPI_jll 1404.4 ms ✓ OpenSpecFun_jll 1441.1 ms ✓ libaec_jll 1534.2 ms ✓ Xorg_libpciaccess_jll 1393.5 ms ✓ Libiconv_jll 4614.5 ms ✓ OpenMPI_jll 4497.8 ms ✓ MPItrampoline_jll 3481.8 ms ✓ SplittablesBase 755.4 ms ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 1231.0 ms ✓ ArrayInterface → ArrayInterfaceSparseArraysExt 1368.9 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 789.3 ms ✓ ADTypes → ADTypesChainRulesCoreExt 872.2 ms ✓ DifferentiationInterface → DifferentiationInterfaceChainRulesCoreExt 2914.4 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 778.4 ms ✓ ArrayInterface → ArrayInterfaceChainRulesCoreExt 2511.1 ms ✓ FilePathsBase → FilePathsBaseTestExt 897.1 ms ✓ FilePathsBase → FilePathsBaseMmapExt 1552.2 ms ✓ SortingAlgorithms 1672.7 ms ✓ YAXArrayBase 2827.8 ms ✓ QuadGK 37763.0 ms ✓ PrettyTables 1398.3 ms ✓ StaticArrays → StaticArraysStatisticsExt 1479.7 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 1459.0 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 1422.6 ms ✓ DifferentiationInterface → DifferentiationInterfaceStaticArraysExt 1366.6 ms ✓ Adapt → AdaptStaticArraysExt 1284.4 ms ✓ IntervalSets → IntervalSetsRecipesBaseExt 3746.5 ms ✓ JSON 984.8 ms ✓ InlineStrings → ParsersExt 1403.0 ms ✓ Blosc_jll 1448.5 ms ✓ libzip_jll 1505.1 ms ✓ Rmath 5092.1 ms ✓ SpecialFunctions 1420.6 ms ✓ XML2_jll 2358.1 ms ✓ ParallelUtilities 1308.6 ms ✓ FiniteDiff 4990.6 ms ✓ StatsBase 88352.2 ms ✓ DataFrames 4261.2 ms ✓ Interpolations 23619.3 ms ✓ DimensionalData 2516.3 ms ✓ WeakRefStrings 3773.7 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 2328.8 ms ✓ HypergeometricFunctions 1335.0 ms ✓ DiffRules 1432.1 ms ✓ Hwloc_jll 1442.9 ms ✓ FiniteDiff → FiniteDiffStaticArraysExt 1193.9 ms ✓ FiniteDiff → FiniteDiffSparseArraysExt 971.8 ms ✓ DifferentiationInterface → DifferentiationInterfaceFiniteDiffExt 2857.2 ms ✓ OnlineStatsBase 1959.8 ms ✓ PDMats → StatsBaseExt 2706.0 ms ✓ DiskArrayTools 2263.8 ms ✓ DimensionalData → DimensionalDataSparseArraysExt 1703.2 ms ✓ DimensionalData → DimensionalDataDiskArraysExt 3012.4 ms ✓ DimensionalData → DimensionalDataStatsBaseExt 1685.7 ms ✓ DimensionalData → DimensionalDataChainRulesCoreExt 2685.8 ms ✓ YAXArrayBase → DimensionalDataExt 28749.0 ms ✓ CSV 2861.0 ms ✓ StatsFuns 7497.2 ms ✓ ForwardDiff 5036.7 ms ✓ MPICH_jll 3381.1 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 9423.8 ms ✓ Distributions 2098.0 ms ✓ ForwardDiff → ForwardDiffStaticArraysExt 1604.5 ms ✓ DifferentiationInterface → DifferentiationInterfaceForwardDiffExt 5886.9 ms ✓ HDF5_jll 3478.3 ms ✓ Distributions → DistributionsTestExt 3430.3 ms ✓ Distributions → DistributionsChainRulesCoreExt WARNING: Constructor for type "Extrema" was extended in `OnlineStats` without explicit qualification or import.  NOTE: Assumed "Extrema" refers to `OnlineStatsBase.Extrema`. This behavior is deprecated and may differ in future versions.  NOTE: This behavior may have differed in Julia versions prior to 1.12.  Hint: If you intended to create a new generic function of the same name, use `function Extrema end`.  Hint: To silence the warning, qualify `Extrema` as `OnlineStatsBase.Extrema` in the method signature or explicitly `import OnlineStatsBase: Extrema`. 5085.7 ms ✓ OnlineStats 2266.0 ms ✓ NLSolversBase 5745.5 ms ✓ NetCDF_jll 3387.7 ms ✓ WeightedOnlineStats 2472.9 ms ✓ LineSearches 7076.2 ms ✓ NetCDF 6957.2 ms ✓ Optim 5726.3 ms ✓ YAXArrayBase → NetCDFExt 8887.1 ms ✓ YAXArrays 24877.8 ms ✓ ReefModEngine 162 dependencies successfully precompiled in 546 seconds. 40 already precompiled. 1 dependency had output during precompilation: ┌ OnlineStats │ WARNING: Constructor for type "Extrema" was extended in `OnlineStats` without explicit qualification or import. │ NOTE: Assumed "Extrema" refers to `OnlineStatsBase.Extrema`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Extrema end`. │ Hint: To silence the warning, qualify `Extrema` as `OnlineStatsBase.Extrema` in the method signature or explicitly `import OnlineStatsBase: Extrema`. └ Precompilation completed after 563.87s ################################################################################ # Testing # Testing ReefModEngine Status `/tmp/jl_zrtKZp/Project.toml` [336ed68f] CSV v0.10.15 [a93c6f00] DataFrames v1.8.1 [0703355e] DimensionalData v0.29.25 ⌅ [682c06a0] JSON v0.21.4 ⌅ [30363a11] NetCDF v0.11.8 [f4ffb74a] ReefModEngine v1.5.0 [10745b16] Statistics v1.11.1 [2913bbd2] StatsBase v0.34.8 ⌅ [c21b50f5] YAXArrays v0.5.14 [ade2ca70] Dates v1.11.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_zrtKZp/Manifest.toml` [47edcb42] ADTypes v1.19.0 [1520ce14] AbstractTrees v0.4.5 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [4fba245c] ArrayInterface v7.22.0 [13072b0f] AxisAlgorithms v1.1.0 ⌅ [179af706] CFTime v0.1.4 [336ed68f] CSV v0.10.15 [d360d2e6] ChainRulesCore v1.26.0 [944b1d66] CodecZlib v0.7.8 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.18.1 [187b0558] ConstructionBase v1.6.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.12 [0703355e] DimensionalData v0.29.25 ⌃ [fcd2136c] DiskArrayTools v0.1.11 ⌅ [3c3547ce] DiskArrays v0.3.23 [31c24e10] Distributions v0.25.122 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.5 [411431e0] Extents v0.1.6 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.15.0 [6a86dc24] FiniteDiff v2.29.0 [f6369f11] ForwardDiff v1.3.0 [c27321d9] Glob v1.3.1 [34004b35] HypergeometricFunctions v0.3.28 [842dd82b] InlineStrings v1.4.5 [85a1e053] Interfaces v0.3.2 ⌅ [a98d9a8b] Interpolations v0.15.1 [8197267c] IntervalSets v0.7.13 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 ⌅ [682c06a0] JSON v0.21.4 [8ac3fa9e] LRUCache v1.6.2 [b964fa9f] LaTeXStrings v1.4.0 [d3d80556] LineSearches v7.5.1 [2ab3a3ac] LogExpFunctions v0.3.29 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.16 [e1d29d7a] Missings v1.2.0 [d41bc354] NLSolversBase v7.10.0 [77ba4419] NaNMath v1.1.3 ⌅ [30363a11] NetCDF v0.11.8 [6fe1bfb0] OffsetArrays v1.17.0 [a15396b6] OnlineStats v1.7.2 [925886fa] OnlineStatsBase v1.7.1 [429524aa] Optim v1.13.3 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.36 [fad6cfc8] ParallelUtilities v0.8.6 [69de0a69] Parsers v2.8.3 [2dfb63ee] PooledArrays v1.4.3 [85a6dd25] PositiveFactorizations v0.2.4 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 [08abe8d2] PrettyTables v3.1.2 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [c84ed2f1] Ratios v0.4.5 [3cdcf5f2] RecipesBase v1.3.4 [f4ffb74a] ReefModEngine v1.5.0 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [91c51154] SentinelArrays v1.4.8 [efcf1570] Setfield v1.1.2 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.6.1 [171d559e] SplittablesBase v0.1.15 [90137ffa] StaticArrays v1.9.15 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.8 [4c63d2b9] StatsFuns v1.5.2 [892a3eda] StringManipulation v0.4.2 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [3bb67fe8] TranscodingStreams v0.11.3 [ea10d353] WeakRefStrings v1.4.2 [bbac0a1f] WeightedOnlineStats v0.6.3 [efce3f68] WoodburyMatrices v1.0.0 [76eceee3] WorkerUtilities v1.6.1 [90b8fcef] YAXArrayBase v0.7.6 ⌅ [c21b50f5] YAXArrays v0.5.14 [0b7ba130] Blosc_jll v1.21.7+0 [6e34b625] Bzip2_jll v1.0.9+0 ⌅ [0234f1f7] HDF5_jll v1.14.3+3 [e33a78d0] Hwloc_jll v2.12.2+0 [94ce4f54] Libiconv_jll v1.18.0+0 [5ced341a] Lz4_jll v1.10.1+0 [7cb0a576] MPICH_jll v4.3.2+0 [f1f71cc9] MPItrampoline_jll v5.5.4+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 ⌅ [7243133f] NetCDF_jll v400.902.211+1 ⌅ [fe0851c0] OpenMPI_jll v4.1.8+1 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 ⌅ [02c8fc9c] XML2_jll v2.13.9+0 [ffd25f8a] XZ_jll v5.8.1+0 [a65dc6b1] Xorg_libpciaccess_jll v0.18.1+0 [477f73a3] libaec_jll v1.1.4+0 [337d8026] libzip_jll v1.11.3+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.17.0+0 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.11.4 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.68.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... ERROR: LoadError: KeyError: key "RME_PATH" not found Stacktrace: [1] (::Base.var"#getindex##11#getindex##12")(k::String) @ Base ./env.jl:164 [2] access_env(onError::Base.var"#getindex##11#getindex##12", var::String) @ Base ./env.jl:60 [3] getindex(::Base.EnvDict, k::String) @ Base ./env.jl:164 [4] top-level scope @ ~/.julia/packages/ReefModEngine/EGoVr/test/runtests.jl:4 [5] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [6] top-level scope @ none:6 [7] eval(m::Module, e::Any) @ Core ./boot.jl:489 [8] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [9] _start() @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/ReefModEngine/EGoVr/test/runtests.jl:4 Testing failed after 42.12s ERROR: LoadError: Package ReefModEngine errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2946 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2795 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:572 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:548 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [12] include(mod::Module, _path::String) @ Base ./Base.jl:309 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 664.45s: package tests unexpectedly errored