Package evaluation to test PALEOsediment on Julia 1.14.0-DEV.1299 (6d6224db99*) started at 2025-11-27T20:33:43.426 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.74s ################################################################################ # Installation # Installing PALEOsediment... Resolving package versions... Installed Lz4_jll ───────────────────── v1.10.1+0 Installed NetCDF_jll ────────────────── v401.900.300+0 Installed Bzip2_jll ─────────────────── v1.0.9+0 Installed InlineStrings ─────────────── v1.4.5 Installed MacroTools ────────────────── v0.5.16 Installed DiskArrays ────────────────── v0.4.18 Installed CFTime ────────────────────── v0.2.4 Installed DataStructures ────────────── v0.19.3 Installed libaec_jll ────────────────── v1.1.4+0 Installed Adapt ─────────────────────── v4.4.0 Installed MPICH_jll ─────────────────── v4.3.2+0 Installed ConstructionBase ──────────── v1.6.0 Installed ArnoldiMethod ─────────────── v0.4.0 Installed CodecZlib ─────────────────── v0.7.8 Installed ExprTools ─────────────────── v0.1.10 Installed TranscodingStreams ────────── v0.11.3 Installed OrderedCollections ────────── v1.8.1 Installed MicrosoftMPI_jll ──────────── v10.1.4+3 Installed Compat ────────────────────── v4.18.1 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed SIMD ──────────────────────── v3.7.2 Installed DataAPI ───────────────────── v1.16.0 Installed Statistics ────────────────── v1.11.1 Installed InvertedIndices ───────────── v1.3.1 Installed Xorg_libpciaccess_jll ─────── v0.18.1+0 Installed StringEncodings ───────────── v0.3.7 Installed PrecompileTools ───────────── v1.3.3 Installed StructArrays ──────────────── v0.7.2 Installed Atomix ────────────────────── v1.1.2 Installed TimerOutputs ──────────────── v0.5.29 Installed DataValueInterfaces ───────── v1.0.0 Installed OffsetArrays ──────────────── v1.17.0 Installed SentinelArrays ────────────── v1.4.8 Installed Blosc_jll ─────────────────── v1.21.7+0 Installed StaticArraysCore ──────────── v1.4.4 Installed CodeTracking ──────────────── v3.0.0 Installed Compiler ──────────────────── v0.1.1 Installed StructUtils ───────────────── v2.6.0 Installed StaticArrays ──────────────── v1.9.15 Installed ChainRulesCore ────────────── v1.26.0 Installed Revise ────────────────────── v3.12.3 Installed PALEOaqchem ───────────────── v0.3.19 Installed IrrationalConstants ───────── v0.2.6 Installed Ratios ────────────────────── v0.4.5 Installed libzip_jll ────────────────── v1.11.3+0 Installed AxisAlgorithms ────────────── v1.1.0 Installed StringManipulation ────────── v0.4.2 Installed Infiltrator ───────────────── v1.9.4 Installed Requires ──────────────────── v1.3.1 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed SimpleTraits ──────────────── v0.9.5 Installed HDF5_jll ──────────────────── v1.14.6+0 Installed LoweredCodeUtils ──────────── v3.5.0 Installed YAML ──────────────────────── v0.4.16 Installed Interpolations ────────────── v0.15.1 Installed LogExpFunctions ───────────── v0.3.29 Installed OpenMPI_jll ───────────────── v5.0.9+0 Installed Parsers ───────────────────── v2.8.3 Installed BufferedStreams ───────────── v1.2.2 Installed Hwloc_jll ─────────────────── v2.12.2+0 Installed JuliaInterpreter ──────────── v0.10.8 Installed JSON ──────────────────────── v1.3.0 Installed PrettyTables ──────────────── v3.1.2 Installed XML2_jll ──────────────────── v2.13.9+0 Installed WoodburyMatrices ──────────── v1.0.0 Installed Tables ────────────────────── v1.12.1 Installed UnsafeAtomics ─────────────── v0.3.0 Installed SpecialFunctions ──────────── v2.6.1 Installed Reexport ──────────────────── v1.2.2 Installed SLEEF_jll ─────────────────── v3.9.0+0 Installed NCDatasets ────────────────── v0.14.10 Installed Missings ──────────────────── v1.2.0 Installed Preferences ───────────────── v1.5.0 Installed DataFrames ────────────────── v1.8.1 Installed PALEOsediment ─────────────── v0.3.4 Installed MPIPreferences ────────────── v0.1.11 Installed PooledArrays ──────────────── v1.4.3 Installed BenchmarkTools ────────────── v1.6.3 Installed JLLWrappers ───────────────── v1.7.1 Installed TableTraits ───────────────── v1.0.1 Installed CommonDataModel ───────────── v0.4.1 Installed PALEOboxes ────────────────── v0.22.3 Installed Libiconv_jll ──────────────── v1.18.0+0 Installed LLVMOpenMP_jll ────────────── v18.1.8+0 Installed XZ_jll ────────────────────── v5.8.1+0 Installed LaTeXStrings ──────────────── v1.4.0 Installed SortingAlgorithms ─────────── v1.2.2 Installed LRUCache ──────────────────── v1.6.2 Installed HDF5 ──────────────────────── v0.17.2 Installed Crayons ───────────────────── v4.1.1 Installed MPItrampoline_jll ─────────── v5.5.4+0 Installed MAT ───────────────────────── v0.10.7 Installed DocStringExtensions ───────── v0.9.5 Installed Inflate ───────────────────── v0.1.5 Installed Graphs ────────────────────── v1.13.1 Installing 16 artifacts Installed artifact OpenSpecFun 194.9 KiB Installed artifact libzip 177.6 KiB Installed artifact LLVMOpenMP 661.6 KiB Installed artifact Xorg_libpciaccess 24.8 KiB Installed artifact libaec 49.6 KiB Installed artifact XZ 1.5 MiB Installed artifact SLEEF 2.7 MiB Installed artifact NetCDF 936.0 KiB Installed artifact Libiconv 1.9 MiB Installed artifact Hwloc 3.5 MiB Installed artifact XML2 2.5 MiB Installed artifact Blosc 44.2 KiB Installed artifact Lz4 239.7 KiB Installed artifact Bzip2 503.5 KiB Installed artifact HDF5 5.7 MiB Installed artifact MPICH 3.3 MiB Updating `~/.julia/environments/v1.14/Project.toml` [e0a37952] + PALEOsediment v0.3.4 Updating `~/.julia/environments/v1.14/Manifest.toml` [79e6a3ab] + Adapt v4.4.0 [ec485272] + ArnoldiMethod v0.4.0 [a9b6321e] + Atomix v1.1.2 [13072b0f] + AxisAlgorithms v1.1.0 [6e4b80f9] + BenchmarkTools v1.6.3 [e1450e63] + BufferedStreams v1.2.2 [179af706] + CFTime v0.2.4 [d360d2e6] + ChainRulesCore v1.26.0 [da1fd8a2] + CodeTracking v3.0.0 [944b1d66] + CodecZlib v0.7.8 [1fbeeb36] + CommonDataModel v0.4.1 [34da2185] + Compat v4.18.1 [807dbc54] + Compiler v0.1.1 [187b0558] + ConstructionBase v1.6.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [3c3547ce] + DiskArrays v0.4.18 [ffbed154] + DocStringExtensions v0.9.5 [e2ba6199] + ExprTools v0.1.10 [86223c79] + Graphs v1.13.1 [f67ccb44] + HDF5 v0.17.2 [5903a43b] + Infiltrator v1.9.4 [d25df0c9] + Inflate v0.1.5 [842dd82b] + InlineStrings v1.4.5 ⌅ [a98d9a8b] + Interpolations v0.15.1 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [682c06a0] + JSON v1.3.0 [aa1ae85d] + JuliaInterpreter v0.10.8 [8ac3fa9e] + LRUCache v1.6.2 [b964fa9f] + LaTeXStrings v1.4.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [6f1432cf] + LoweredCodeUtils v3.5.0 ⌅ [23992714] + MAT v0.10.7 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [85f8d34a] + NCDatasets v0.14.10 [6fe1bfb0] + OffsetArrays v1.17.0 [bac558e1] + OrderedCollections v1.8.1 [673cec3b] + PALEOaqchem v0.3.19 ⌃ [804b410e] + PALEOboxes v0.22.3 [e0a37952] + PALEOsediment v0.3.4 [69de0a69] + Parsers v2.8.3 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [08abe8d2] + PrettyTables v3.1.2 [c84ed2f1] + Ratios v0.4.5 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [295af30f] + Revise v3.12.3 [fdea26ae] + SIMD v3.7.2 [91c51154] + SentinelArrays v1.4.8 [699a6c99] + SimpleTraits v0.9.5 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [69024149] + StringEncodings v0.3.7 [892a3eda] + StringManipulation v0.4.2 [09ab397b] + StructArrays v0.7.2 [ec057cc2] + StructUtils v2.6.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [1e6cf692] + TestEnv v1.102.3 [a759f4b9] + TimerOutputs v0.5.29 [3bb67fe8] + TranscodingStreams v0.11.3 [013be700] + UnsafeAtomics v0.3.0 [efce3f68] + WoodburyMatrices v1.0.0 [ddb6d928] + YAML v0.4.16 [0b7ba130] + Blosc_jll v1.21.7+0 [6e34b625] + Bzip2_jll v1.0.9+0 ⌅ [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.2+0 [1d63c593] + LLVMOpenMP_jll v18.1.8+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [5ced341a] + Lz4_jll v1.10.1+0 [7cb0a576] + MPICH_jll v4.3.2+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [7243133f] + NetCDF_jll v401.900.300+0 [fe0851c0] + OpenMPI_jll v5.0.9+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [63e82ce6] + SLEEF_jll v3.9.0+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [ffd25f8a] + XZ_jll v5.8.1+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0 [477f73a3] + libaec_jll v1.1.4+0 [337d8026] + libzip_jll v1.11.3+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [9abbd945] + Profile v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.17.0+0 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.68.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 17.43s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... WARNING: Imported binding Operations.project_rel_path was undeclared at import time during import to TestEnv. 4721.7 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. 1 dependency had output during precompilation: ┌ TestEnv │ WARNING: Imported binding Operations.project_rel_path was undeclared at import time during import to TestEnv. └ ┌ Error: Failed to use TestEnv.jl; test dependencies will not be precompiled │ exception = │ UndefVarError: `project_rel_path` not defined in `TestEnv` │ Suggestion: this global was defined as `Pkg.Operations.project_rel_path` but not assigned a value. │ Stacktrace: │ [1] get_test_dir(ctx::Pkg.Types.Context, pkgspec::PackageSpec) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:75 │ [2] test_dir_has_project_file │ @ ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:52 [inlined] │ [3] maybe_gen_project_override! │ @ ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:83 [inlined] │ [4] activate(pkg::String; allow_reresolve::Bool) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/activate_set.jl:12 │ [5] activate(pkg::String) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/activate_set.jl:9 │ [6] top-level scope │ @ /PkgEval.jl/scripts/precompile.jl:24 │ [7] include(mod::Module, _path::String) │ @ Base ./Base.jl:309 │ [8] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:344 │ [9] _start() │ @ Base ./client.jl:577 └ @ Main /PkgEval.jl/scripts/precompile.jl:26 Precompiling package dependencies... Precompiling packages... 2593.5 ms ✓ Crayons 4319.0 ms ✓ MacroTools 1645.4 ms ✓ InlineStrings 781.9 ms ✓ Reexport 1146.3 ms ✓ Statistics 853.5 ms ✓ DataAPI 1094.9 ms ✓ ConstructionBase 2029.1 ms ✓ IrrationalConstants 783.2 ms ✓ DataValueInterfaces 961.2 ms ✓ StaticArraysCore 1074.5 ms ✓ Requires 3217.0 ms ✓ UnsafeAtomics 1203.1 ms ✓ OrderedCollections 795.5 ms ✓ InvertedIndices 1026.4 ms ✓ DocStringExtensions 1483.7 ms ✓ OffsetArrays 1291.0 ms ✓ WoodburyMatrices 916.1 ms ✓ Inflate 837.0 ms ✓ ExprTools 939.9 ms ✓ BufferedStreams 1534.9 ms ✓ Compiler 1158.3 ms ✓ TranscodingStreams 968.6 ms ✓ LRUCache 750.4 ms ✓ IteratorInterfaceExtensions 817.9 ms ✓ LaTeXStrings 2823.0 ms ✓ SentinelArrays 2295.2 ms ✓ CFTime 1386.8 ms ✓ StructUtils 1117.8 ms ✓ Compat 1111.4 ms ✓ Preferences 1504.2 ms ✓ CodeTracking 4825.3 ms ✓ Infiltrator 3443.0 ms ✓ SimpleTraits 1334.3 ms ✓ Statistics → SparseArraysExt 942.8 ms ✓ Missings 1000.9 ms ✓ PooledArrays 800.1 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 914.6 ms ✓ Adapt 837.4 ms ✓ Ratios 955.2 ms ✓ Atomix 3376.3 ms ✓ DataStructures 1335.8 ms ✓ LogExpFunctions 1326.8 ms ✓ AxisAlgorithms 3080.7 ms ✓ TimerOutputs 938.8 ms ✓ CodecZlib 767.8 ms ✓ LRUCache → SerializationExt 820.1 ms ✓ TableTraits 811.4 ms ✓ Compat → CompatLinearAlgebraExt 1135.9 ms ✓ JLLWrappers 1368.0 ms ✓ MPIPreferences 891.0 ms ✓ PrecompileTools 9944.6 ms ✓ JuliaInterpreter 2241.0 ms ✓ DiskArrays 1160.3 ms ✓ Adapt → AdaptSparseArraysExt 773.8 ms ✓ OffsetArrays → OffsetArraysAdaptExt 1008.7 ms ✓ SortingAlgorithms 1673.4 ms ✓ Tables 2520.7 ms ✓ ChainRulesCore 1323.7 ms ✓ libaec_jll 1316.9 ms ✓ Xorg_libpciaccess_jll 1420.4 ms ✓ Bzip2_jll 1409.1 ms ✓ LLVMOpenMP_jll 1405.3 ms ✓ Libiconv_jll 1436.9 ms ✓ Lz4_jll 1423.8 ms ✓ XZ_jll 1134.8 ms ✓ MicrosoftMPI_jll 1487.7 ms ✓ OpenSpecFun_jll 4754.2 ms ✓ MPItrampoline_jll 13496.8 ms ✓ StaticArrays 3155.7 ms ✓ StringManipulation 15644.9 ms ✓ SIMD 15581.3 ms ✓ Parsers 18053.8 ms ✓ LoweredCodeUtils 3189.1 ms ✓ CommonDataModel 1499.0 ms ✓ StructArrays 838.6 ms ✓ StructUtils → StructUtilsTablesExt 1319.7 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 3089.1 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 1411.1 ms ✓ SLEEF_jll 1718.2 ms ✓ StringEncodings 1639.3 ms ✓ XML2_jll 1547.3 ms ✓ Blosc_jll 1337.1 ms ✓ libzip_jll 3615.4 ms ✓ SpecialFunctions 1044.5 ms ✓ StaticArrays → StaticArraysStatisticsExt 1086.9 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 2881.7 ms ✓ ArnoldiMethod 1239.9 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 1043.9 ms ✓ Adapt → AdaptStaticArraysExt 36552.3 ms ✓ PrettyTables 5380.0 ms ✓ JSON 711.2 ms ✓ InlineStrings → ParsersExt ┌ Warning: precompile directive │ precompile(Tuple{mbody.sig.parameters[1], Symbol, Bool, Bool, Iterators.Pairs{Symbol, Bool, Tuple{Symbol}, NamedTuple{(:skip_include,), Tuple{Bool}}}, typeof(methods_by_execution!), Compiled, MI, Module, Expr}) │ failed. Please report an issue in Revise (after checking for duplicates) or remove this directive. └ @ Revise ~/.julia/packages/Revise/KjLt4/src/precompile.jl:65 9811.7 ms ✓ Revise 1328.6 ms ✓ StructArrays → StructArraysSparseArraysExt 836.1 ms ✓ StructArrays → StructArraysLinearAlgebraExt 795.6 ms ✓ StructArrays → StructArraysAdaptExt 1601.1 ms ✓ StructArrays → StructArraysStaticArraysExt 2400.2 ms ✓ YAML 1106.1 ms ✓ Hwloc_jll 3512.2 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 9609.0 ms ✓ Graphs 4384.4 ms ✓ Interpolations 88712.5 ms ✓ DataFrames 3583.0 ms ✓ BenchmarkTools 4157.0 ms ✓ Revise → DistributedExt 5132.3 ms ✓ MPICH_jll 4743.7 ms ✓ OpenMPI_jll 5583.8 ms ✓ HDF5_jll 14926.1 ms ✓ HDF5 5454.2 ms ✓ NetCDF_jll 7603.0 ms ✓ MAT 14662.1 ms ✓ NCDatasets ERROR: LoadError: cannot declare PALEOboxes.VarList_tuple_nothing exported; it is already declared public Stacktrace:  [1] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:310  [2] top-level scope  @ ~/.julia/packages/PALEOboxes/4HX2Z/src/PALEOboxes.jl:124  [3] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [4] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3157  [5] top-level scope  @ stdin:5  [6] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [7] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3003  [8] include_string  @ ./loading.jl:3013 [inlined]  [9] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [10] _start()  @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/PALEOboxes/4HX2Z/src/VariableReaction.jl:585 in expression starting at /home/pkgeval/.julia/packages/PALEOboxes/4HX2Z/src/PALEOboxes.jl:1 in expression starting at stdin:5 1 dependency had output during precompilation: ┌ Revise │ ┌ Warning: precompile directive │ │ precompile(Tuple{mbody.sig.parameters[1], Symbol, Bool, Bool, Iterators.Pairs{Symbol, Bool, Tuple{Symbol}, NamedTuple{(:skip_include,), Tuple{Bool}}}, typeof(methods_by_execution!), Compiled, MI, Module, Expr}) │ │ failed. Please report an issue in Revise (after checking for duplicates) or remove this directive. │ └ @ Revise ~/.julia/packages/Revise/KjLt4/src/precompile.jl:65 └ Precompilation completed after 476.16s ################################################################################ # Testing # Testing PALEOsediment Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function. Installed Qt6Base_jll ────────────────────── v6.8.2+2 Installed libaom_jll ─────────────────────── v3.13.1+0 Installed HarfBuzz_jll ───────────────────── v8.5.1+0 Installed VertexSafeGraphs ───────────────── v0.2.0 Installed libass_jll ─────────────────────── v0.17.4+0 Installed Libuuid_jll ────────────────────── v2.41.2+0 Installed CommonWorldInvalidations ───────── v1.0.0 Installed PALEOmodel ─────────────────────── v0.16.5 Installed Libtiff_jll ────────────────────── v4.7.2+0 Installed FastPower ──────────────────────── v1.2.0 Installed Cairo_jll ──────────────────────── v1.18.5+0 Installed Graphite2_jll ──────────────────── v1.3.15+0 Installed SIMDTypes ──────────────────────── v0.1.0 Installed PlotThemes ─────────────────────── v3.3.0 Installed Xorg_libXinerama_jll ───────────── v1.1.6+0 Installed Sundials ───────────────────────── v4.28.0 Installed libinput_jll ───────────────────── v1.28.1+0 Installed Fontconfig_jll ─────────────────── v2.17.1+0 Installed CpuId ──────────────────────────── v0.3.1 Installed fzf_jll ────────────────────────── v0.61.1+0 Installed Distances ──────────────────────── v0.10.12 Installed StaticArrayInterface ───────────── v1.8.0 Installed EnzymeCore ─────────────────────── v0.8.17 Installed FileIO ─────────────────────────── v1.17.1 Installed NaNMath ────────────────────────── v1.1.3 Installed Opus_jll ───────────────────────── v1.5.2+0 Installed FastBroadcast ──────────────────── v0.3.5 Installed Xorg_libxcb_jll ────────────────── v1.17.1+0 Installed PackageExtensionCompat ─────────── v1.0.2 Installed Ogg_jll ────────────────────────── v1.3.6+0 Installed EnumX ──────────────────────────── v1.0.5 Installed NLSolversBase ──────────────────── v7.10.0 Installed DiffEqBase ─────────────────────── v6.176.0 Installed Unzip ──────────────────────────── v0.2.0 Installed Xorg_xcb_util_wm_jll ───────────── v0.4.2+0 Installed LZO_jll ────────────────────────── v2.10.3+0 Installed Jieko ──────────────────────────── v0.2.1 Installed FFMPEG ─────────────────────────── v0.4.5 Installed InverseFunctions ───────────────── v0.1.17 Installed LERC_jll ───────────────────────── v4.0.1+0 Installed Static ─────────────────────────── v1.3.1 Installed RegistryInstances ──────────────── v0.1.0 Installed Xorg_libICE_jll ────────────────── v1.1.2+0 Installed Grisu ──────────────────────────── v1.0.2 Installed eudev_jll ──────────────────────── v3.2.14+0 Installed Format ─────────────────────────── v1.3.7 Installed EpollShim_jll ──────────────────── v0.0.20230411+1 Installed UnPack ─────────────────────────── v1.0.2 Installed RecursiveArrayTools ────────────── v3.39.0 Installed ADTypes ────────────────────────── v1.19.0 Installed DataStructures ─────────────────── v0.18.22 Installed OpenSSH_jll ────────────────────── v10.2.1+0 Installed DiffResults ────────────────────── v1.1.0 Installed ManualMemory ───────────────────── v0.1.8 Installed URIs ───────────────────────────── v1.6.1 Installed AbstractTrees ──────────────────── v0.4.5 Installed DelimitedFiles ─────────────────── v1.9.1 Installed StatsBase ──────────────────────── v0.34.8 Installed Xorg_xcb_util_jll ──────────────── v0.4.1+0 Installed UnicodeFun ─────────────────────── v0.4.1 Installed Xorg_libXfixes_jll ─────────────── v6.0.2+0 Installed x264_jll ───────────────────────── v10164.0.1+0 Installed Xorg_libXau_jll ────────────────── v1.0.13+0 Installed mtdev_jll ──────────────────────── v1.1.7+0 Installed ArrayInterface ─────────────────── v7.22.0 Installed SparseDiffTools ────────────────── v2.26.0 Installed Qt6ShaderTools_jll ─────────────── v6.8.2+1 Installed CEnum ──────────────────────────── v0.5.0 Installed Libffi_jll ─────────────────────── v3.4.7+0 Installed LoggingExtras ──────────────────── v1.2.0 Installed LayoutPointers ─────────────────── v0.1.17 Installed MultiFloats ────────────────────── v2.3.0 Installed CommonSubexpressions ───────────── v0.3.1 Installed ConcreteStructs ────────────────── v0.2.3 Installed Pixman_jll ─────────────────────── v0.44.2+0 Installed Expat_jll ──────────────────────── v2.7.3+0 Installed GPUArraysCore ──────────────────── v0.2.0 Installed libdecor_jll ───────────────────── v0.2.2+0 Installed libpng_jll ─────────────────────── v1.6.51+0 Installed Xorg_libXcursor_jll ────────────── v1.2.4+0 Installed TruncatedStacktraces ───────────── v1.4.0 Installed Contour ────────────────────────── v0.6.3 Installed libfdk_aac_jll ─────────────────── v2.0.4+0 Installed Xorg_xcb_util_keysyms_jll ──────── v0.4.1+0 Installed StableRNGs ─────────────────────── v1.0.4 Installed ColorVectorSpace ───────────────── v0.11.0 Installed BitFlags ───────────────────────── v0.1.9 Installed HTTP ───────────────────────────── v1.10.19 Installed IOCapture ──────────────────────── v1.0.0 Installed FFMPEG_jll ─────────────────────── v8.0.0+0 Installed SimpleBufferStream ─────────────── v1.2.0 Installed Setfield ───────────────────────── v1.1.2 Installed Scratch ────────────────────────── v1.3.0 Installed Qt6Declarative_jll ─────────────── v6.8.2+1 Installed CompositionsBase ───────────────── v0.1.2 Installed RelocatableFolders ─────────────── v1.0.1 Installed CommonSolve ────────────────────── v0.2.4 Installed ForwardDiff ────────────────────── v0.10.39 Installed Moshi ──────────────────────────── v0.3.7 Installed Sundials_jll ───────────────────── v5.2.3+0 Installed Plots ──────────────────────────── v1.41.2 Installed Ghostscript_jll ────────────────── v9.55.1+0 Installed JLFzf ──────────────────────────── v0.1.11 Installed AliasTables ────────────────────── v1.1.3 Installed DifferentiationInterface ───────── v0.7.12 Installed BitTwiddlingConvenienceFunctions ─ v0.1.6 Installed ConcurrentUtilities ────────────── v2.5.0 Installed RecipesBase ────────────────────── v1.3.4 Installed Git_LFS_jll ────────────────────── v3.7.0+0 Installed FunctionWrappersWrappers ───────── v0.1.3 Installed SciMLOperators ─────────────────── v0.4.0 Installed Sparspak ───────────────────────── v0.3.14 Installed Xorg_libXi_jll ─────────────────── v1.8.3+0 Installed libevdev_jll ───────────────────── v1.13.4+0 Installed Wayland_jll ────────────────────── v1.24.0+0 Installed Xorg_libxkbfile_jll ────────────── v1.1.3+0 Installed Measures ───────────────────────── v0.3.3 Installed SciMLStructures ────────────────── v1.7.0 Installed Colors ─────────────────────────── v0.13.1 Installed ColorSchemes ───────────────────── v3.31.0 Installed Libglvnd_jll ───────────────────── v1.7.1+1 Installed SciMLPublic ────────────────────── v1.0.0 Installed Xorg_xkbcomp_jll ───────────────── v1.4.7+0 Installed ColorTypes ─────────────────────── v0.12.1 Installed Latexify ───────────────────────── v0.16.10 Installed Glib_jll ───────────────────────── v2.86.0+0 Installed FunctionWrappers ───────────────── v1.1.3 Installed Vulkan_Loader_jll ──────────────── v1.3.243+0 Installed DiffRules ──────────────────────── v1.15.1 Installed Xorg_xcb_util_cursor_jll ───────── v0.1.6+0 Installed Git_jll ────────────────────────── v2.51.3+0 Installed FastClosures ───────────────────── v0.3.2 Installed FiniteDiff ─────────────────────── v2.29.0 Installed Xorg_xcb_util_renderutil_jll ───── v0.3.10+0 Installed SciMLBase ──────────────────────── v2.99.0 Installed CloseOpenIntervals ─────────────── v0.1.13 Installed Polyester ──────────────────────── v0.7.18 Installed Xorg_libXdmcp_jll ──────────────── v1.1.6+0 Installed Xorg_xkeyboard_config_jll ──────── v2.44.0+0 Installed Xorg_libSM_jll ─────────────────── v1.2.6+0 Installed Documenter ─────────────────────── v1.16.1 Installed x265_jll ───────────────────────── v4.1.0+0 Installed SparsityTracing ────────────────── v0.2.6 Installed RecipesPipeline ────────────────── v0.6.12 Installed Pango_jll ──────────────────────── v1.57.0+0 Installed ThreadingUtilities ─────────────── v0.5.5 Installed Xorg_xtrans_jll ────────────────── v1.6.0+0 Installed GR_jll ─────────────────────────── v0.73.19+1 Installed Accessors ──────────────────────── v0.1.42 Installed Libmount_jll ───────────────────── v2.41.2+0 Installed JpegTurbo_jll ──────────────────── v3.1.3+0 Installed Dbus_jll ───────────────────────── v1.16.2+0 Installed Xorg_libX11_jll ────────────────── v1.8.12+0 Installed RuntimeGeneratedFunctions ──────── v0.5.16 Installed ExceptionUnwrapping ────────────── v0.1.11 Installed StrideArraysCore ───────────────── v0.5.8 Installed SymbolicIndexingInterface ──────── v0.3.46 Installed PlotUtils ──────────────────────── v1.4.4 Installed TensorCore ─────────────────────── v0.1.1 Installed OpenSSL ────────────────────────── v1.6.0 Installed StatsAPI ───────────────────────── v1.7.1 Installed ExproniconLite ─────────────────── v0.10.14 Installed MbedTLS ────────────────────────── v1.1.9 Installed MarkdownAST ────────────────────── v0.1.2 Installed xkbcommon_jll ──────────────────── v1.13.0+0 Installed Xorg_xcb_util_image_jll ────────── v0.4.1+0 Installed GettextRuntime_jll ─────────────── v0.22.4+0 Installed CPUSummary ─────────────────────── v0.2.7 Installed FriBidi_jll ────────────────────── v1.0.17+0 Installed NLsolve ────────────────────────── v4.5.1 Installed GLFW_jll ───────────────────────── v3.4.0+2 Installed LAME_jll ───────────────────────── v3.100.3+0 Installed YAML ───────────────────────────── v0.4.12 Installed Xorg_libXrender_jll ────────────── v0.9.12+0 Installed Parameters ─────────────────────── v0.12.3 Installed IfElse ─────────────────────────── v0.1.1 Installed libvorbis_jll ──────────────────── v1.3.8+0 Installed PtrArrays ──────────────────────── v1.3.0 Installed MuladdMacro ────────────────────── v0.2.4 Installed Git ────────────────────────────── v1.5.0 Installed FixedPointNumbers ──────────────── v0.8.5 Installed LazilyInitializedFields ────────── v1.3.0 Installed Showoff ────────────────────────── v1.0.3 Installed MbedTLS_jll ────────────────────── v2.28.1010+0 Installed FreeType2_jll ──────────────────── v2.13.4+0 Installed Xorg_libXrandr_jll ─────────────── v1.5.5+0 Installed Xorg_libXext_jll ───────────────── v1.3.7+0 Installed LineSearches ───────────────────── v7.5.1 Installed Qt6Wayland_jll ─────────────────── v6.8.2+2 Installed PALEOboxes ─────────────────────── v0.22.4 Installed PolyesterWeave ─────────────────── v0.2.2 Installed ANSIColoredPrinters ────────────── v0.0.1 Installed GR ─────────────────────────────── v0.73.19 Installing 75 artifacts Installed artifact Xorg_libXau 36.6 KiB Installed artifact GLFW 180.1 KiB Installed artifact LAME 292.5 KiB Installed artifact Xorg_libICE 384.9 KiB Installed artifact Xorg_libXext 699.9 KiB Installed artifact Xorg_libSM 164.1 KiB Installed artifact libpng 328.9 KiB Installed artifact Xorg_libxcb 2.1 MiB Installed artifact Expat 283.3 KiB Installed artifact Pixman 372.2 KiB Installed artifact Dbus 489.8 KiB Installed artifact libass 427.8 KiB Installed artifact fzf 3.3 MiB Installed artifact x264 2.1 MiB Installed artifact Pango 2.0 MiB Installed artifact Libtiff 2.3 MiB Installed artifact Xorg_xcb_util_image 54.3 KiB Installed artifact Xorg_xcb_util 39.5 KiB Installed artifact libevdev 117.1 KiB Installed artifact Xorg_xkeyboard_config 537.5 KiB Installed artifact Xorg_xcb_util_wm 147.9 KiB Installed artifact eudev 3.9 MiB Installed artifact xkbcommon 298.7 KiB Installed artifact Xorg_libxkbfile 486.7 KiB Installed artifact libfdk_aac 2.8 MiB Installed artifact Xorg_libXcursor 227.1 KiB Installed artifact Xorg_xkbcomp 274.8 KiB Installed artifact mtdev 79.6 KiB Installed artifact Libuuid 3.7 MiB Installed artifact x265 1.4 MiB Installed artifact Graphite2 120.2 KiB Installed artifact GR 16.3 MiB Installed artifact libinput 1.0 MiB Installed artifact Xorg_libXrender 435.9 KiB Installed artifact JpegTurbo 1.4 MiB Installed artifact Qt6ShaderTools 2.1 MiB Installed artifact Xorg_libXinerama 50.1 KiB Installed artifact Sundials 2.1 MiB Installed artifact Ghostscript 31.4 MiB Installed artifact Xorg_libX11 13.9 MiB Installed artifact libdecor 44.1 KiB Installed artifact Cairo 2.2 MiB Installed artifact Vulkan_Loader 177.3 KiB Installed artifact Fontconfig 984.8 KiB Installed artifact FriBidi 78.9 KiB Installed artifact MbedTLS 2.2 MiB Installed artifact Xorg_xcb_util_cursor 27.6 KiB Installed artifact Wayland 390.6 KiB Installed artifact libvorbis 271.0 KiB Installed artifact GettextRuntime 543.0 KiB Installed artifact Libmount 6.5 MiB Installed artifact HarfBuzz 1.7 MiB Installed artifact Glib 7.7 MiB Installed artifact LERC 272.9 KiB Installed artifact Xorg_libXi 1.6 MiB Installed artifact Xorg_xcb_util_renderutil 32.1 KiB Installed artifact FreeType2 1.5 MiB Installed artifact LZO 208.9 KiB Installed artifact Xorg_xcb_util_keysyms 17.8 KiB Installed artifact Xorg_xtrans 48.2 KiB Installed artifact Opus 925.5 KiB Installed artifact Qt6Wayland 2.2 MiB Installed artifact Libffi 44.2 KiB Installed artifact Xorg_libXfixes 59.0 KiB Installed artifact Ogg 250.3 KiB Installed artifact libaom 6.4 MiB Installed artifact Xorg_libXrandr 354.5 KiB Installed artifact Xorg_libXdmcp 67.7 KiB Installed artifact OpenSSH 4.3 MiB Installed artifact Libglvnd 833.5 KiB Installed artifact Git_LFS 9.6 MiB Installed artifact Qt6Base 20.6 MiB Installed artifact FFMPEG 11.7 MiB Installed artifact Qt6Declarative 21.6 MiB Installed artifact Git 48.9 MiB Updating `/tmp/jl_sCx47A/Project.toml` [e30172f5] + Documenter v1.16.1 [d3d80556] + LineSearches v7.5.1 [2774e3e8] + NLsolve v4.5.1 [804b410e] ↑ PALEOboxes v0.22.3 ⇒ v0.22.4 [bf7b4fbe] + PALEOmodel v0.16.5 [e0a37952] + PALEOsediment v0.3.4 [91a5bcdd] + Plots v1.41.2 ⌅ [c3572dad] + Sundials v4.28.0 [8dfed614] ~ Test ⇒ v1.11.0 Updating `/tmp/jl_sCx47A/Manifest.toml` [47edcb42] + ADTypes v1.19.0 [a4c015fc] + ANSIColoredPrinters v0.0.1 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.22.0 [d1d4a3ce] + BitFlags v0.1.9 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [fa961155] + CEnum v0.5.0 [2a0fbf3d] + CPUSummary v0.2.7 [fb6a15b2] + CloseOpenIntervals v0.1.13 [35d6a980] + ColorSchemes v3.31.0 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.1 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [f0e56b4a] + ConcurrentUtilities v2.5.0 [d38c429a] + Contour v0.6.3 [adafc99b] + CpuId v0.3.1 ⌅ [864edb3b] ↓ DataStructures v0.19.3 ⇒ v0.18.22 [8bb1440f] + DelimitedFiles v1.9.1 ⌃ [2b5f629d] + DiffEqBase v6.176.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.12 [b4f34e82] + Distances v0.10.12 [e30172f5] + Documenter v1.16.1 [4e289a0a] + EnumX v1.0.5 [f151be2c] + EnzymeCore v0.8.17 [460bff9d] + ExceptionUnwrapping v0.1.11 [55351af7] + ExproniconLite v0.10.14 [c87230d0] + FFMPEG v0.4.5 [7034ab61] + FastBroadcast v0.3.5 [9aa1b823] + FastClosures v0.3.2 [a4df4552] + FastPower v1.2.0 [5789e2e9] + FileIO v1.17.1 [6a86dc24] + FiniteDiff v2.29.0 [53c48c17] + FixedPointNumbers v0.8.5 [1fa38f19] + Format v1.3.7 ⌅ [f6369f11] + ForwardDiff v0.10.39 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 [46192b85] + GPUArraysCore v0.2.0 [28b8d3ca] + GR v0.73.19 [d7ba0133] + Git v1.5.0 [42e2da0e] + Grisu v1.0.2 [cd3eb016] + HTTP v1.10.19 [b5f81e59] + IOCapture v1.0.0 [615f187c] + IfElse v0.1.1 [3587e190] + InverseFunctions v0.1.17 [1019f520] + JLFzf v0.1.11 [ae98c720] + Jieko v0.2.1 [23fbe1c1] + Latexify v0.16.10 [10f19ff3] + LayoutPointers v0.1.17 [0e77f7df] + LazilyInitializedFields v1.3.0 [d3d80556] + LineSearches v7.5.1 [e6f89c97] + LoggingExtras v1.2.0 [d125e4d3] + ManualMemory v0.1.8 [d0879d2d] + MarkdownAST v0.1.2 [739be429] + MbedTLS v1.1.9 [442fdcdd] + Measures v0.3.3 [2e0e35c7] + Moshi v0.3.7 [46d2c3a1] + MuladdMacro v0.2.4 [bdf0d083] + MultiFloats v2.3.0 [d41bc354] + NLSolversBase v7.10.0 [2774e3e8] + NLsolve v4.5.1 [77ba4419] + NaNMath v1.1.3 [4d8831e6] + OpenSSL v1.6.0 [804b410e] ↑ PALEOboxes v0.22.3 ⇒ v0.22.4 [bf7b4fbe] + PALEOmodel v0.16.5 [e0a37952] + PALEOsediment v0.3.4 [65ce6f38] + PackageExtensionCompat v1.0.2 [d96e819e] + Parameters v0.12.3 [ccf2f8ad] + PlotThemes v3.3.0 [995b91a9] + PlotUtils v1.4.4 [91a5bcdd] + Plots v1.41.2 [f517fe37] + Polyester v0.7.18 [1d0040c9] + PolyesterWeave v0.2.2 [43287f4e] + PtrArrays v1.3.0 [3cdcf5f2] + RecipesBase v1.3.4 [01d81517] + RecipesPipeline v0.6.12 [731186ca] + RecursiveArrayTools v3.39.0 [2792f1a3] + RegistryInstances v0.1.0 [05181044] + RelocatableFolders v1.0.1 [7e49a35a] + RuntimeGeneratedFunctions v0.5.16 [94e857df] + SIMDTypes v0.1.0 ⌃ [0bca4576] + SciMLBase v2.99.0 ⌅ [c0aeaf25] + SciMLOperators v0.4.0 [431bcebd] + SciMLPublic v1.0.0 [53ae85a6] + SciMLStructures v1.7.0 [6c6a2e73] + Scratch v1.3.0 [efcf1570] + Setfield v1.1.2 [992d4aef] + Showoff v1.0.3 [777ac1f9] + SimpleBufferStream v1.2.0 [47a9eef4] + SparseDiffTools v2.26.0 [06eadbd4] + SparsityTracing v0.2.6 [e56a9233] + Sparspak v0.3.14 [860ef19b] + StableRNGs v1.0.4 [aedffcd0] + Static v1.3.1 [0d7ed370] + StaticArrayInterface v1.8.0 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.8 [7792a7ef] + StrideArraysCore v0.5.8 ⌅ [c3572dad] + Sundials v4.28.0 [2efcf032] + SymbolicIndexingInterface v0.3.46 [62fd8b95] + TensorCore v0.1.1 [8290d209] + ThreadingUtilities v0.5.5 [781d530d] + TruncatedStacktraces v1.4.0 [5c2747f8] + URIs v1.6.1 [3a884ed6] + UnPack v1.0.2 [1cfade01] + UnicodeFun v0.4.1 [41fe7b60] + Unzip v0.2.0 [19fa3120] + VertexSafeGraphs v0.2.0 ⌅ [ddb6d928] ↓ YAML v0.4.16 ⇒ v0.4.12 [83423d85] + Cairo_jll v1.18.5+0 [ee1fde0b] + Dbus_jll v1.16.2+0 [2702e6a9] + EpollShim_jll v0.0.20230411+1 [2e619515] + Expat_jll v2.7.3+0 [b22a6f82] + FFMPEG_jll v8.0.0+0 [a3f928ae] + Fontconfig_jll v2.17.1+0 [d7e528f0] + FreeType2_jll v2.13.4+0 [559328eb] + FriBidi_jll v1.0.17+0 [0656b61e] + GLFW_jll v3.4.0+2 [d2c73de3] + GR_jll v0.73.19+1 [b0724c58] + GettextRuntime_jll v0.22.4+0 [61579ee1] + Ghostscript_jll v9.55.1+0 [020c3dae] + Git_LFS_jll v3.7.0+0 [f8c6e375] + Git_jll v2.51.3+0 [7746bdde] + Glib_jll v2.86.0+0 [3b182d85] + Graphite2_jll v1.3.15+0 [2e76f6c2] + HarfBuzz_jll v8.5.1+0 [aacddb02] + JpegTurbo_jll v3.1.3+0 [c1c5ebd0] + LAME_jll v3.100.3+0 [88015f11] + LERC_jll v4.0.1+0 [dd4b983a] + LZO_jll v2.10.3+0 ⌅ [e9f186c6] + Libffi_jll v3.4.7+0 [7e76a0d4] + Libglvnd_jll v1.7.1+1 [4b2f31a3] + Libmount_jll v2.41.2+0 [89763e89] + Libtiff_jll v4.7.2+0 [38a345b3] + Libuuid_jll v2.41.2+0 [c8ffd9c3] + MbedTLS_jll v2.28.1010+0 [e7412a2a] + Ogg_jll v1.3.6+0 [9bd350c2] + OpenSSH_jll v10.2.1+0 [91d4177d] + Opus_jll v1.5.2+0 [36c8627f] + Pango_jll v1.57.0+0 ⌅ [30392449] + Pixman_jll v0.44.2+0 [c0090381] + Qt6Base_jll v6.8.2+2 [629bc702] + Qt6Declarative_jll v6.8.2+1 [ce943373] + Qt6ShaderTools_jll v6.8.2+1 [e99dba38] + Qt6Wayland_jll v6.8.2+2 ⌅ [fb77eaff] + Sundials_jll v5.2.3+0 [a44049a8] + Vulkan_Loader_jll v1.3.243+0 [a2964d1f] + Wayland_jll v1.24.0+0 [f67eecfb] + Xorg_libICE_jll v1.1.2+0 [c834827a] + Xorg_libSM_jll v1.2.6+0 [4f6342f7] + Xorg_libX11_jll v1.8.12+0 [0c0b7dd1] + Xorg_libXau_jll v1.0.13+0 [935fb764] + Xorg_libXcursor_jll v1.2.4+0 [a3789734] + Xorg_libXdmcp_jll v1.1.6+0 [1082639a] + Xorg_libXext_jll v1.3.7+0 [d091e8ba] + Xorg_libXfixes_jll v6.0.2+0 [a51aa0fd] + Xorg_libXi_jll v1.8.3+0 [d1454406] + Xorg_libXinerama_jll v1.1.6+0 [ec84b674] + Xorg_libXrandr_jll v1.5.5+0 [ea2f1a96] + Xorg_libXrender_jll v0.9.12+0 [c7cfdc94] + Xorg_libxcb_jll v1.17.1+0 [cc61e674] + Xorg_libxkbfile_jll v1.1.3+0 [e920d4aa] + Xorg_xcb_util_cursor_jll v0.1.6+0 [12413925] + Xorg_xcb_util_image_jll v0.4.1+0 [2def613f] + Xorg_xcb_util_jll v0.4.1+0 [975044d2] + Xorg_xcb_util_keysyms_jll v0.4.1+0 [0d47668e] + Xorg_xcb_util_renderutil_jll v0.3.10+0 [c22f9ab0] + Xorg_xcb_util_wm_jll v0.4.2+0 [35661453] + Xorg_xkbcomp_jll v1.4.7+0 [33bec58e] + Xorg_xkeyboard_config_jll v2.44.0+0 [c5fb5394] + Xorg_xtrans_jll v1.6.0+0 [35ca27e7] + eudev_jll v3.2.14+0 [214eeab7] + fzf_jll v0.61.1+0 [a4ae2306] + libaom_jll v3.13.1+0 [0ac62f75] + libass_jll v0.17.4+0 [1183f4f0] + libdecor_jll v0.2.2+0 [2db6ffa8] + libevdev_jll v1.13.4+0 [f638f0a6] + libfdk_aac_jll v2.0.4+0 [36db933b] + libinput_jll v1.28.1+0 [b53b4c65] + libpng_jll v1.6.51+0 [f27f6e37] + libvorbis_jll v1.3.8+0 [009596ad] + mtdev_jll v1.1.7+0 [1270edf5] + x264_jll v10164.0.1+0 [dfaa095f] + x265_jll v4.1.0+0 [d8fb68d0] + xkbcommon_jll v1.13.0+0 [8dfed614] ~ Test ⇒ v1.11.0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Test Successfully re-resolved Status `/tmp/jl_sCx47A/Project.toml` [a93c6f00] DataFrames v1.8.1 [e30172f5] Documenter v1.16.1 [5903a43b] Infiltrator v1.9.4 [d3d80556] LineSearches v7.5.1 [2774e3e8] NLsolve v4.5.1 [673cec3b] PALEOaqchem v0.3.19 [804b410e] PALEOboxes v0.22.4 [bf7b4fbe] PALEOmodel v0.16.5 [e0a37952] PALEOsediment v0.3.4 [91a5bcdd] Plots v1.41.2 [276daf66] SpecialFunctions v2.6.1 ⌅ [c3572dad] Sundials v4.28.0 [1e6cf692] TestEnv v1.102.3 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [2f01184e] SparseArrays v1.13.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_sCx47A/Manifest.toml` [47edcb42] ADTypes v1.19.0 [a4c015fc] ANSIColoredPrinters v0.0.1 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [ec485272] ArnoldiMethod v0.4.0 [4fba245c] ArrayInterface v7.22.0 [a9b6321e] Atomix v1.1.2 [13072b0f] AxisAlgorithms v1.1.0 [6e4b80f9] BenchmarkTools v1.6.3 [d1d4a3ce] BitFlags v0.1.9 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [e1450e63] BufferedStreams v1.2.2 [fa961155] CEnum v0.5.0 [179af706] CFTime v0.2.4 [2a0fbf3d] CPUSummary v0.2.7 [d360d2e6] ChainRulesCore v1.26.0 [fb6a15b2] CloseOpenIntervals v0.1.13 [da1fd8a2] CodeTracking v3.0.0 [944b1d66] CodecZlib v0.7.8 [35d6a980] ColorSchemes v3.31.0 [3da002f7] ColorTypes v0.12.1 [c3611d14] ColorVectorSpace v0.11.0 [5ae59095] Colors v0.13.1 [1fbeeb36] CommonDataModel v0.4.1 [38540f10] CommonSolve v0.2.4 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [807dbc54] Compiler v0.1.1 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.3 [f0e56b4a] ConcurrentUtilities v2.5.0 [187b0558] ConstructionBase v1.6.0 [d38c429a] Contour v0.6.3 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [8bb1440f] DelimitedFiles v1.9.1 ⌃ [2b5f629d] DiffEqBase v6.176.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.12 [3c3547ce] DiskArrays v0.4.18 [b4f34e82] Distances v0.10.12 [ffbed154] DocStringExtensions v0.9.5 [e30172f5] Documenter v1.16.1 [4e289a0a] EnumX v1.0.5 [f151be2c] EnzymeCore v0.8.17 [460bff9d] ExceptionUnwrapping v0.1.11 [e2ba6199] ExprTools v0.1.10 [55351af7] ExproniconLite v0.10.14 [c87230d0] FFMPEG v0.4.5 [7034ab61] FastBroadcast v0.3.5 [9aa1b823] FastClosures v0.3.2 [a4df4552] FastPower v1.2.0 [5789e2e9] FileIO v1.17.1 [6a86dc24] FiniteDiff v2.29.0 [53c48c17] FixedPointNumbers v0.8.5 [1fa38f19] Format v1.3.7 ⌅ [f6369f11] ForwardDiff v0.10.39 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v0.1.3 [46192b85] GPUArraysCore v0.2.0 [28b8d3ca] GR v0.73.19 [d7ba0133] Git v1.5.0 [86223c79] Graphs v1.13.1 [42e2da0e] Grisu v1.0.2 [f67ccb44] HDF5 v0.17.2 [cd3eb016] HTTP v1.10.19 [b5f81e59] IOCapture v1.0.0 [615f187c] IfElse v0.1.1 [5903a43b] Infiltrator v1.9.4 [d25df0c9] Inflate v0.1.5 [842dd82b] InlineStrings v1.4.5 ⌅ [a98d9a8b] Interpolations v0.15.1 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [1019f520] JLFzf v0.1.11 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v1.3.0 [ae98c720] Jieko v0.2.1 [aa1ae85d] JuliaInterpreter v0.10.8 [8ac3fa9e] LRUCache v1.6.2 [b964fa9f] LaTeXStrings v1.4.0 [23fbe1c1] Latexify v0.16.10 [10f19ff3] LayoutPointers v0.1.17 [0e77f7df] LazilyInitializedFields v1.3.0 [d3d80556] LineSearches v7.5.1 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.2.0 [6f1432cf] LoweredCodeUtils v3.5.0 ⌅ [23992714] MAT v0.10.7 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.16 [d125e4d3] ManualMemory v0.1.8 [d0879d2d] MarkdownAST v0.1.2 [739be429] MbedTLS v1.1.9 [442fdcdd] Measures v0.3.3 [e1d29d7a] Missings v1.2.0 [2e0e35c7] Moshi v0.3.7 [46d2c3a1] MuladdMacro v0.2.4 [bdf0d083] MultiFloats v2.3.0 [85f8d34a] NCDatasets v0.14.10 [d41bc354] NLSolversBase v7.10.0 [2774e3e8] NLsolve v4.5.1 [77ba4419] NaNMath v1.1.3 [6fe1bfb0] OffsetArrays v1.17.0 [4d8831e6] OpenSSL v1.6.0 [bac558e1] OrderedCollections v1.8.1 [673cec3b] PALEOaqchem v0.3.19 [804b410e] PALEOboxes v0.22.4 [bf7b4fbe] PALEOmodel v0.16.5 [e0a37952] PALEOsediment v0.3.4 [65ce6f38] PackageExtensionCompat v1.0.2 [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.3 [ccf2f8ad] PlotThemes v3.3.0 [995b91a9] PlotUtils v1.4.4 [91a5bcdd] Plots v1.41.2 [f517fe37] Polyester v0.7.18 [1d0040c9] PolyesterWeave v0.2.2 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 [08abe8d2] PrettyTables v3.1.2 [43287f4e] PtrArrays v1.3.0 [c84ed2f1] Ratios v0.4.5 [3cdcf5f2] RecipesBase v1.3.4 [01d81517] RecipesPipeline v0.6.12 [731186ca] RecursiveArrayTools v3.39.0 [189a3867] Reexport v1.2.2 [2792f1a3] 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v0.3.7 [892a3eda] StringManipulation v0.4.2 [09ab397b] StructArrays v0.7.2 [ec057cc2] StructUtils v2.6.0 ⌅ [c3572dad] Sundials v4.28.0 [2efcf032] SymbolicIndexingInterface v0.3.46 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [62fd8b95] TensorCore v0.1.1 [1e6cf692] TestEnv v1.102.3 [8290d209] ThreadingUtilities v0.5.5 [a759f4b9] TimerOutputs v0.5.29 [3bb67fe8] TranscodingStreams v0.11.3 [781d530d] TruncatedStacktraces v1.4.0 [5c2747f8] URIs v1.6.1 [3a884ed6] UnPack v1.0.2 [1cfade01] UnicodeFun v0.4.1 [013be700] UnsafeAtomics v0.3.0 [41fe7b60] Unzip v0.2.0 [19fa3120] VertexSafeGraphs v0.2.0 [efce3f68] WoodburyMatrices v1.0.0 ⌅ [ddb6d928] YAML v0.4.12 [0b7ba130] Blosc_jll v1.21.7+0 [6e34b625] Bzip2_jll v1.0.9+0 [83423d85] Cairo_jll v1.18.5+0 [ee1fde0b] Dbus_jll v1.16.2+0 [2702e6a9] EpollShim_jll v0.0.20230411+1 [2e619515] Expat_jll v2.7.3+0 [b22a6f82] FFMPEG_jll v8.0.0+0 [a3f928ae] Fontconfig_jll v2.17.1+0 [d7e528f0] FreeType2_jll v2.13.4+0 [559328eb] FriBidi_jll v1.0.17+0 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Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Cloning git-repo `https://github.com/PALEOtoolkit/NLsolve.jl` Updating git-repo `https://github.com/PALEOtoolkit/NLsolve.jl` Resolving package versions... Updating `/tmp/jl_sCx47A/Project.toml` [2774e3e8] ~ NLsolve v4.5.1 ⇒ v4.5.1 `https://github.com/PALEOtoolkit/NLsolve.jl#project_region` Updating `/tmp/jl_sCx47A/Manifest.toml` [2774e3e8] ~ NLsolve v4.5.1 ⇒ v4.5.1 `https://github.com/PALEOtoolkit/NLsolve.jl#project_region` ERROR: LoadError: cannot declare PALEOboxes.VarList_tuple_nothing exported; it is already declared public Stacktrace:  [1] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:310  [2] top-level scope  @ ~/.julia/packages/PALEOboxes/k4QWy/src/PALEOboxes.jl:124  [3] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [4] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3157  [5] top-level scope  @ stdin:5  [6] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [7] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3003  [8] include_string  @ ./loading.jl:3013 [inlined]  [9] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [10] _start()  @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/PALEOboxes/k4QWy/src/VariableReaction.jl:585 in expression starting at /home/pkgeval/.julia/packages/PALEOboxes/k4QWy/src/PALEOboxes.jl:1 in expression starting at stdin:5 1 dependency had output during precompilation: ┌ PALEOboxes │ [Output was shown above] └ sediment examples: Error During Test at /home/pkgeval/.julia/packages/PALEOsediment/UyLVX/test/runtests.jl:13 Got exception outside of a @test LoadError: The following 1 package failed to precompile: PALEOboxes Failed to precompile PALEOboxes [804b410e-d900-4b2a-9ecd-f5a06d4c1fd4] to "/home/pkgeval/.julia/compiled/v1.14/PALEOboxes/jl_LN5vzW" (ProcessExited(1)). in expression starting at /home/pkgeval/.julia/packages/PALEOsediment/UyLVX/examples/boudreau1996/runtests.jl:7 PALEOsediment all: Error During Test at /home/pkgeval/.julia/packages/PALEOsediment/UyLVX/test/runtests.jl:11 Got exception outside of a @test UndefVarError: `PALEOsediment` not defined in `Main` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] top-level scope @ ~/.julia/packages/PALEOsediment/UyLVX/test/runtests.jl:13 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [3] macro expansion @ ~/.julia/packages/PALEOsediment/UyLVX/test/runtests.jl:19 [inlined] [4] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [5] top-level scope @ none:6 [6] eval(m::Module, e::Any) @ Core ./boot.jl:489 [7] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [8] _start() @ Base ./client.jl:577 Test Summary: | Error Total Time PALEOsediment all | 2 2 4m22.9s sediment examples | 1 1 4m14.8s RNG of the outermost testset: Random.Xoshiro(0x493b398fa0b4842b, 0x7c2d8586251a826b, 0xd6f603cc4d3f9bed, 0xd561451f9f0d7f14, 0xc63ac0fceba09099) ERROR: LoadError: Some tests did not pass: 0 passed, 0 failed, 2 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/PALEOsediment/UyLVX/test/runtests.jl:11 Testing failed after 430.26s ERROR: LoadError: Package PALEOsediment errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2946 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2795 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:572 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:548 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [12] include(mod::Module, _path::String) @ Base ./Base.jl:309 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 972.83s: package fails to precompile