Package evaluation to test NCDatasets on Julia 1.14.0-DEV.1299 (6d6224db99*) started at 2025-11-27T16:37:24.806 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 10.1s ################################################################################ # Installation # Installing NCDatasets... Resolving package versions... Installed NetCDF_jll ──────────── v401.900.300+0 Installed Bzip2_jll ───────────── v1.0.9+0 Installed ConstructionBase ────── v1.6.0 Installed Lz4_jll ─────────────── v1.10.1+0 Installed DiskArrays ──────────── v0.4.18 Installed libaec_jll ──────────── v1.1.4+0 Installed CFTime ──────────────── v0.2.4 Installed DataStructures ──────── v0.19.3 Installed MPICH_jll ───────────── v4.3.2+0 Installed OrderedCollections ──── v1.8.1 Installed MicrosoftMPI_jll ────── v10.1.4+3 Installed Xorg_libpciaccess_jll ─ v0.18.1+0 Installed Blosc_jll ───────────── v1.21.7+0 Installed libzip_jll ──────────── v1.11.3+0 Installed Statistics ──────────── v1.11.1 Installed OffsetArrays ────────── v1.17.0 Installed XML2_jll ────────────── v2.13.9+0 Installed Hwloc_jll ───────────── v2.12.2+0 Installed OpenMPI_jll ─────────── v5.0.9+0 Installed MPIPreferences ──────── v0.1.11 Installed CommonDataModel ─────── v0.4.1 Installed Preferences ─────────── v1.5.0 Installed HDF5_jll ────────────── v1.14.6+0 Installed XZ_jll ──────────────── v5.8.1+0 Installed Libiconv_jll ────────── v1.18.0+0 Installed JLLWrappers ─────────── v1.7.1 Installed NCDatasets ──────────── v0.14.10 Installed LRUCache ────────────── v1.6.2 Installed MPItrampoline_jll ───── v5.5.4+0 Installing 13 artifacts Installed artifact Xorg_libpciaccess 24.8 KiB Installed artifact libaec 49.6 KiB Installed artifact NetCDF 936.0 KiB Installed artifact libzip 177.6 KiB Installed artifact Blosc 44.2 KiB Installed artifact Hwloc 3.5 MiB Installed artifact XML2 2.5 MiB Installed artifact Libiconv 1.9 MiB Installed artifact XZ 1.5 MiB Installed artifact Lz4 239.7 KiB Installed artifact Bzip2 503.5 KiB Installed artifact HDF5 5.7 MiB Installed artifact MPICH 3.3 MiB Updating `~/.julia/environments/v1.14/Project.toml` [85f8d34a] + NCDatasets v0.14.10 Updating `~/.julia/environments/v1.14/Manifest.toml` [179af706] + CFTime v0.2.4 [1fbeeb36] + CommonDataModel v0.4.1 [187b0558] + ConstructionBase v1.6.0 [864edb3b] + DataStructures v0.19.3 [3c3547ce] + DiskArrays v0.4.18 [692b3bcd] + JLLWrappers v1.7.1 [8ac3fa9e] + LRUCache v1.6.2 [3da0fdf6] + MPIPreferences v0.1.11 [85f8d34a] + NCDatasets v0.14.10 [6fe1bfb0] + OffsetArrays v1.17.0 [bac558e1] + OrderedCollections v1.8.1 [21216c6a] + Preferences v1.5.0 [10745b16] + Statistics v1.11.1 [0b7ba130] + Blosc_jll v1.21.7+0 [6e34b625] + Bzip2_jll v1.0.9+0 ⌅ [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.2+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [5ced341a] + Lz4_jll v1.10.1+0 [7cb0a576] + MPICH_jll v4.3.2+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [7243133f] + NetCDF_jll v401.900.300+0 [fe0851c0] + OpenMPI_jll v5.0.9+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [ffd25f8a] + XZ_jll v5.8.1+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0 [477f73a3] + libaec_jll v1.1.4+0 [337d8026] + libzip_jll v1.11.3+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [f489334b] + StyledStrings v1.13.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.17.0+0 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.68.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 15.14s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... WARNING: Imported binding Operations.project_rel_path was undeclared at import time during import to TestEnv. 5090.8 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. 1 dependency had output during precompilation: ┌ TestEnv │ WARNING: Imported binding Operations.project_rel_path was undeclared at import time during import to TestEnv. └ ┌ Error: Failed to use TestEnv.jl; test dependencies will not be precompiled │ exception = │ UndefVarError: `project_rel_path` not defined in `TestEnv` │ Suggestion: this global was defined as `Pkg.Operations.project_rel_path` but not assigned a value. │ Stacktrace: │ [1] get_test_dir(ctx::Pkg.Types.Context, pkgspec::PackageSpec) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:75 │ [2] test_dir_has_project_file │ @ ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:52 [inlined] │ [3] maybe_gen_project_override! │ @ ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:83 [inlined] │ [4] activate(pkg::String; allow_reresolve::Bool) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/activate_set.jl:12 │ [5] activate(pkg::String) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/activate_set.jl:9 │ [6] top-level scope │ @ /PkgEval.jl/scripts/precompile.jl:24 │ [7] include(mod::Module, _path::String) │ @ Base ./Base.jl:309 │ [8] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:344 │ [9] _start() │ @ Base ./client.jl:577 └ @ Main /PkgEval.jl/scripts/precompile.jl:26 Precompiling package dependencies... Precompiling packages... 1210.0 ms ✓ Statistics 1175.5 ms ✓ ConstructionBase 1318.3 ms ✓ OrderedCollections 1695.1 ms ✓ OffsetArrays 1080.0 ms ✓ LRUCache 2429.4 ms ✓ CFTime 1179.7 ms ✓ Preferences 828.2 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 3709.2 ms ✓ DataStructures 1233.2 ms ✓ JLLWrappers 1468.1 ms ✓ MPIPreferences 2604.2 ms ✓ DiskArrays 1453.3 ms ✓ libaec_jll 1456.5 ms ✓ Xorg_libpciaccess_jll 1446.5 ms ✓ Bzip2_jll 1455.5 ms ✓ Libiconv_jll 1508.0 ms ✓ Lz4_jll 1504.1 ms ✓ XZ_jll 1216.8 ms ✓ MicrosoftMPI_jll 4768.1 ms ✓ MPItrampoline_jll 3301.6 ms ✓ CommonDataModel 1488.4 ms ✓ XML2_jll 1526.2 ms ✓ Blosc_jll 1540.0 ms ✓ libzip_jll 1569.3 ms ✓ Hwloc_jll 5032.4 ms ✓ MPICH_jll 4853.4 ms ✓ OpenMPI_jll 5839.0 ms ✓ HDF5_jll 5602.7 ms ✓ NetCDF_jll 16141.9 ms ✓ NCDatasets 30 dependencies successfully precompiled in 82 seconds. 29 already precompiled. Precompilation completed after 104.3s ################################################################################ # Testing # Testing NCDatasets Status `/tmp/jl_pJ1Yf2/Project.toml` [1fbeeb36] CommonDataModel v0.4.1 [864edb3b] DataStructures v0.19.3 [3c3547ce] DiskArrays v0.4.18 [8197267c] IntervalSets v0.7.13 [da04e1cc] MPI v0.20.23 [85f8d34a] NCDatasets v0.14.10 [ade2ca70] Dates v1.11.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_pJ1Yf2/Manifest.toml` [179af706] CFTime v0.2.4 [1fbeeb36] CommonDataModel v0.4.1 [187b0558] ConstructionBase v1.6.0 [864edb3b] DataStructures v0.19.3 [3c3547ce] DiskArrays v0.4.18 [ffbed154] DocStringExtensions v0.9.5 [8197267c] IntervalSets v0.7.13 [692b3bcd] JLLWrappers v1.7.1 [8ac3fa9e] LRUCache v1.6.2 [da04e1cc] MPI v0.20.23 [3da0fdf6] MPIPreferences v0.1.11 [85f8d34a] NCDatasets v0.14.10 [6fe1bfb0] OffsetArrays v1.17.0 [bac558e1] OrderedCollections v1.8.1 [eebad327] PkgVersion v0.3.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 [ae029012] Requires v1.3.1 [10745b16] Statistics v1.11.1 [0b7ba130] Blosc_jll v1.21.7+0 [6e34b625] Bzip2_jll v1.0.9+0 ⌅ [0234f1f7] HDF5_jll v1.14.6+0 [e33a78d0] Hwloc_jll v2.12.2+0 [94ce4f54] Libiconv_jll v1.18.0+0 [5ced341a] Lz4_jll v1.10.1+0 [7cb0a576] MPICH_jll v4.3.2+0 [f1f71cc9] MPItrampoline_jll v5.5.4+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [7243133f] NetCDF_jll v401.900.300+0 [fe0851c0] OpenMPI_jll v5.0.9+0 ⌅ [02c8fc9c] XML2_jll v2.13.9+0 [ffd25f8a] XZ_jll v5.8.1+0 [a65dc6b1] Xorg_libpciaccess_jll v0.18.1+0 [477f73a3] libaec_jll v1.1.4+0 [337d8026] libzip_jll v1.11.3+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [f489334b] StyledStrings v1.13.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.17.0+0 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.11.4 [4536629a] OpenBLAS_jll v0.3.29+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.47.0+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.68.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... NetCDF library: /home/pkgeval/.julia/artifacts/2dbbcf6f14a16f5b58c7aff3de7a9aa8d2134300/lib/libnetcdf.so NetCDF version: 4.9.3 of Mar 9 2025 16:33:53 $ Test Summary: | Pass Total Time NCDatasets | 908 908 6m50.7s Test Summary: | Pass Total Time NetCDF4 groups | 10 10 4.8s Test Summary: | Pass Total Time Variable-length arrays | 22 22 4.2s Test Summary: | Pass Total Time Compound types | 16 16 5.2s Test Summary: | Pass Total Time Time and calendars | 25 25 4.1s Test Summary: | Pass Total Time Multi-file datasets | 83 83 3m10.4s WARNING: Method definition example_file(Any, Any) in module Main at /home/pkgeval/.julia/packages/NCDatasets/W31Xc/test/test_multifile.jl:6 overwritten at /home/pkgeval/.julia/packages/NCDatasets/W31Xc/test/test_defer.jl:5. Test Summary: | Pass Total Time Deferred datasets | 13 13 4.1s Test Summary: | Pass Total Time @select macro | 46 46 2m18.8s Fatal error in internal_Init_thread: Other MPI error, error stack: internal_Init_thread(71)...........: MPI_Init_thread(argc=(nil), argv=(nil), required=2, provided=0x7ffc7499e560) failed MPII_Init_thread(257)..............: MPID_Init(65)......................: init_world(169)....................: channel initialization failed MPIDI_CH3_Init(84).................: MPID_nem_init(314).................: MPID_nem_tcp_init(175).............: MPID_nem_tcp_get_business_card(400): GetSockInterfaceAddr(373)..........: gethostbyname failed, NCDatasets-against-0WHj9DIO (errno 1) MPI: Error During Test at /home/pkgeval/.julia/packages/NCDatasets/W31Xc/test/runtests.jl:78 Got exception outside of a @test LoadError: failed process: Process(setenv(`/home/pkgeval/.julia/artifacts/117d9048128625bb3418b0b4cca48739c5d28740/bin/mpiexec -n 4 /opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so --depwarn=yes --check-bounds=yes --pkgimages=existing -g1 --startup-file=no --startup-file=no /home/pkgeval/.julia/packages/NCDatasets/W31Xc/test/test_mpi_script.jl /tmp/jl_TOfULqXEH8`,["JULIA_NUM_PRECOMPILE_TASKS=1", "JULIA_DEPOT_PATH=/home/pkgeval/.julia:/usr/local/share/julia:", "UCX_ERROR_SIGNALS=SIGILL,SIGBUS,SIGFPE", "JULIA_PKG_PRECOMPILE_AUTO=0", "LD_LIBRARY_PATH=/opt/julia/bin/../lib/julia:/home/pkgeval/.julia/artifacts/5acd766faaca59c3c1f3cfa67e2bf6dcf1e3e883/lib:/home/pkgeval/.julia/artifacts/4a89e14d2f652ad45bcc093d040c97fbcc1a3669/lib:/home/pkgeval/.julia/artifacts/02f7ccbf4bbe00dcdd34eba3f36cd5e8f76f1769/lib:/home/pkgeval/.julia/artifacts/fddb41451df711c595969c8571404433623c75f6/lib:/home/pkgeval/.julia/artifacts/117d9048128625bb3418b0b4cca48739c5d28740/lib:/opt/julia/bin/../lib/julia:/opt/julia/bin/../lib", "CI=true", "UCX_MEMTYPE_CACHE=no", "OPENBLAS_NUM_THREADS=1", "HOME=/home/pkgeval", "JULIA_PKGEVAL=true", "JULIA_NUM_THREADS=1", "OPENBLAS_MAIN_FREE=1", "PATH=/home/pkgeval/.julia/artifacts/4a89e14d2f652ad45bcc093d040c97fbcc1a3669/bin:/home/pkgeval/.julia/artifacts/fddb41451df711c595969c8571404433623c75f6/bin:/home/pkgeval/.julia/artifacts/117d9048128625bb3418b0b4cca48739c5d28740/bin:/usr/local/bin:/usr/local/sbin:/usr/bin:/usr/sbin:/bin:/sbin:/opt/julia/bin", "JULIA_CPU_THREADS=1", "DISPLAY=:1", "PKGEVAL=true", "JULIA_LOAD_PATH=@:/tmp/jl_pJ1Yf2", "PYTHON=", "LANG=C.UTF-8", "R_HOME=*"]), ProcessExited(15)) [15] Stacktrace: [1] pipeline_error @ ./process.jl:611 [inlined] [2] run(::Cmd; wait::Bool) @ Base ./process.jl:526 [3] run(::Cmd) @ Base ./process.jl:523 [4] top-level scope @ ~/.julia/packages/NCDatasets/W31Xc/test/test_mpi_netcdf.jl:9 [5] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [6] top-level scope @ ~/.julia/packages/NCDatasets/W31Xc/test/runtests.jl:81 [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [8] macro expansion @ ~/.julia/packages/NCDatasets/W31Xc/test/runtests.jl:82 [inlined] [9] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [10] top-level scope @ none:6 [11] eval(m::Module, e::Any) @ Core ./boot.jl:489 [12] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [13] _start() @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/NCDatasets/W31Xc/test/test_mpi_netcdf.jl:9 Test Summary: | Error Total Time MPI | 1 1 1m02.0s RNG of the outermost testset: Xoshiro(0xf5c42168a408e271, 0x93d1690512a6f420, 0x6d91062cbc2daf94, 0x138299356ccc0398, 0x5d9fabcd827645dd) ERROR: LoadError: Some tests did not pass: 0 passed, 0 failed, 1 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/NCDatasets/W31Xc/test/runtests.jl:78 Testing failed after 833.49s ERROR: LoadError: Package NCDatasets errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2946 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2795 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:572 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:548 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [12] include(mod::Module, _path::String) @ Base ./Base.jl:309 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 1026.61s: package tests unexpectedly errored