Package evaluation to test DynamicHMCModels on Julia 1.14.0-DEV.1299 (6d6224db99*) started at 2025-11-27T20:52:06.868 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.92s ################################################################################ # Installation # Installing DynamicHMCModels... Resolving package versions... Installed Rmath_jll ──────────────────────── v0.4.3+0 Installed CommonWorldInvalidations ───────── v1.0.0 Installed DiffResults ────────────────────── v1.1.0 Installed StridedViews ───────────────────── v0.4.1 Installed MacroTools ─────────────────────── v0.5.16 Installed SnoopPrecompile ────────────────── v1.0.3 Installed ForwardDiff ────────────────────── v0.10.39 Installed DataStructures ─────────────────── v0.18.22 Installed ManualMemory ───────────────────── v0.1.8 Installed Adapt ──────────────────────────── v4.4.0 Installed FillArrays ─────────────────────── v1.15.0 Installed AliasTables ────────────────────── v1.1.3 Installed DynamicHMC ─────────────────────── v3.3.0 Installed SLEEFPirates ───────────────────── v0.6.43 Installed VectorizationBase ──────────────── v0.21.72 Installed BitTwiddlingConvenienceFunctions ─ v0.1.6 Installed SIMDTypes ──────────────────────── v0.1.0 Installed StatsBase ──────────────────────── v0.33.21 Installed OrderedCollections ─────────────── v1.8.1 Installed Compat ─────────────────────────── v4.18.1 Installed ArrayInterface ─────────────────── v7.22.0 Installed RecipesBase ────────────────────── v1.3.4 Installed IteratorInterfaceExtensions ────── v1.0.0 Installed DataAPI ────────────────────────── v1.16.0 Installed HostCPUFeatures ────────────────── v0.1.17 Installed Statistics ─────────────────────── v1.11.1 Installed TensorCast ─────────────────────── v0.4.9 Installed DataValueInterfaces ────────────── v1.0.0 Installed CpuId ──────────────────────────── v0.3.1 Installed InvertedIndices ────────────────── v1.3.1 Installed StatsAPI ───────────────────────── v1.7.1 Installed CommonSubexpressions ───────────── v0.3.1 Installed PrecompileTools ────────────────── v1.3.3 Installed SentinelArrays ─────────────────── v1.4.8 Installed ProgressMeter ──────────────────── v1.11.0 Installed ArgCheck ───────────────────────── v2.5.0 Installed TransmuteDims ──────────────────── v0.1.17 Installed DynamicHMCModels ───────────────── v2.1.4 Installed LayoutPointers ─────────────────── v0.1.17 Installed StaticArrays ───────────────────── v1.9.15 Installed StaticArraysCore ───────────────── v1.4.4 Installed IrrationalConstants ────────────── v0.1.1 Installed GPUArraysCore ──────────────────── v0.2.0 Installed TupleTools ─────────────────────── v1.6.0 Installed StaticArrayInterface ───────────── v1.8.0 Installed LogDensityProblems ─────────────── v0.10.6 Installed ChainRulesCore ─────────────────── v1.26.0 Installed CPUSummary ─────────────────────── v0.2.7 Installed NaNMath ────────────────────────── v1.1.3 Installed StringManipulation ─────────────── v0.4.2 Installed QuadGK ─────────────────────────── v2.11.2 Installed SciMLPublic ────────────────────── v1.0.0 Installed Requires ───────────────────────── v1.3.1 Installed OpenSpecFun_jll ────────────────── v0.5.6+0 Installed DiffRules ──────────────────────── v1.15.1 Installed LogExpFunctions ────────────────── v0.3.29 Installed TransformVariables ─────────────── v0.3.12 Installed JSON ───────────────────────────── v0.21.4 Installed PackageExtensionCompat ─────────── v1.0.2 Installed PrettyTables ───────────────────── v2.4.0 Installed CSV ────────────────────────────── v0.8.5 Installed Rmath ──────────────────────────── v0.7.1 Installed Parsers ────────────────────────── v1.1.2 Installed Distributions ──────────────────── v0.25.122 Installed IfElse ─────────────────────────── v0.1.1 Installed Parameters ─────────────────────── v0.12.3 Installed Tables ─────────────────────────── v1.12.1 Installed PtrArrays ──────────────────────── v1.3.0 Installed Reexport ───────────────────────── v1.2.2 Installed SpecialFunctions ───────────────── v2.6.1 Installed InverseFunctions ───────────────── v0.1.17 Installed StatsFuns ──────────────────────── v0.9.18 Installed Missings ───────────────────────── v1.2.0 Installed Preferences ────────────────────── v1.5.0 Installed Static ─────────────────────────── v1.3.1 Installed LazyStack ──────────────────────── v0.1.3 Installed PooledArrays ───────────────────── v1.4.3 Installed JLLWrappers ────────────────────── v1.7.1 Installed TableTraits ────────────────────── v1.0.1 Installed DataFrames ─────────────────────── v1.4.4 Installed BenchmarkTools ─────────────────── v0.7.0 Installed LaTeXStrings ───────────────────── v1.4.0 Installed Crayons ────────────────────────── v4.1.1 Installed MCMCDiagnostics ────────────────── v0.3.0 Installed PDMats ─────────────────────────── v0.11.35 Installed UnPack ─────────────────────────── v1.0.2 Installed DocStringExtensions ────────────── v0.8.6 Installed SortingAlgorithms ──────────────── v1.2.2 Installed Strided ────────────────────────── v2.3.2 Installed MonteCarloMeasurements ─────────── v0.10.4 Installing 2 artifacts Installed artifact OpenSpecFun 194.9 KiB Installed artifact Rmath 119.6 KiB Updating `~/.julia/environments/v1.14/Project.toml` [6266e5bf] + DynamicHMCModels v2.1.4 Updating `~/.julia/environments/v1.14/Manifest.toml` [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [4fba245c] + ArrayInterface v7.22.0 ⌅ [6e4b80f9] + BenchmarkTools v0.7.0 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [2a0fbf3d] + CPUSummary v0.2.7 ⌅ [336ed68f] + CSV v0.8.5 [d360d2e6] + ChainRulesCore v1.26.0 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 ⌃ [a93c6f00] + DataFrames v1.4.4 ⌅ [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [31c24e10] + Distributions v0.25.122 ⌅ [ffbed154] + DocStringExtensions v0.8.6 ⌃ [bbc10e6e] + DynamicHMC v3.3.0 [6266e5bf] + DynamicHMCModels v2.1.4 [1a297f60] + FillArrays v1.15.0 ⌅ [f6369f11] + ForwardDiff v0.10.39 [46192b85] + GPUArraysCore v0.2.0 [3e5b6fbb] + HostCPUFeatures v0.1.17 [615f187c] + IfElse v0.1.1 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 ⌅ [92d709cd] + IrrationalConstants v0.1.1 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 ⌅ [682c06a0] + JSON v0.21.4 [b964fa9f] + LaTeXStrings v1.4.0 [10f19ff3] + LayoutPointers v0.1.17 [1fad7336] + LazyStack v0.1.3 ⌅ [6fdf6af0] + LogDensityProblems v0.10.6 [2ab3a3ac] + LogExpFunctions v0.3.29 ⌅ [6e857e4b] + MCMCDiagnostics v0.3.0 [1914dd2f] + MacroTools v0.5.16 [d125e4d3] + ManualMemory v0.1.8 [e1d29d7a] + Missings v1.2.0 ⌅ [0987c9cc] + MonteCarloMeasurements v0.10.4 [77ba4419] + NaNMath v1.1.3 [bac558e1] + OrderedCollections v1.8.1 ⌃ [90014a1f] + PDMats v0.11.35 [65ce6f38] + PackageExtensionCompat v1.0.2 [d96e819e] + Parameters v0.12.3 ⌅ [69de0a69] + Parsers v1.1.2 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 ⌅ [08abe8d2] + PrettyTables v2.4.0 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 ⌅ [79098fc4] + Rmath v0.7.1 [94e857df] + SIMDTypes v0.1.0 [476501e8] + SLEEFPirates v0.6.43 [431bcebd] + SciMLPublic v1.0.0 [91c51154] + SentinelArrays v1.4.8 [66db9d55] + SnoopPrecompile v1.0.3 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [aedffcd0] + Static v1.3.1 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 ⌅ [2913bbd2] + StatsBase v0.33.21 ⌅ [4c63d2b9] + StatsFuns v0.9.18 [5e0ebb24] + Strided v2.3.2 [4db3bf67] + StridedViews v0.4.1 [892a3eda] + StringManipulation v0.4.2 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [02d47bb6] + TensorCast v0.4.9 ⌅ [84d833dd] + TransformVariables v0.3.12 [24ddb15e] + TransmuteDims v0.1.17 [9d95972d] + TupleTools v1.6.0 [3a884ed6] + UnPack v1.0.2 [3d5dd08c] + VectorizationBase v0.21.72 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 ⌅ [f50d1b31] + Rmath_jll v0.4.3+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.17.0+0 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.68.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 11.03s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... WARNING: Imported binding Operations.project_rel_path was undeclared at import time during import to TestEnv. 5816.3 ms ✓ TestEnv 1 dependency successfully precompiled in 6 seconds. 27 already precompiled. 1 dependency had output during precompilation: ┌ TestEnv │ WARNING: Imported binding Operations.project_rel_path was undeclared at import time during import to TestEnv. └ ┌ Error: Failed to use TestEnv.jl; test dependencies will not be precompiled │ exception = │ UndefVarError: `project_rel_path` not defined in `TestEnv` │ Suggestion: this global was defined as `Pkg.Operations.project_rel_path` but not assigned a value. │ Stacktrace: │ [1] get_test_dir(ctx::Pkg.Types.Context, pkgspec::PackageSpec) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:75 │ [2] test_dir_has_project_file │ @ ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:52 [inlined] │ [3] maybe_gen_project_override! │ @ ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:83 [inlined] │ [4] activate(pkg::String; allow_reresolve::Bool) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/activate_set.jl:12 │ [5] activate(pkg::String) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/activate_set.jl:9 │ [6] top-level scope │ @ /PkgEval.jl/scripts/precompile.jl:24 │ [7] include(mod::Module, _path::String) │ @ Base ./Base.jl:309 │ [8] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:344 │ [9] _start() │ @ Base ./client.jl:577 └ @ Main /PkgEval.jl/scripts/precompile.jl:26 Precompiling package dependencies... Precompiling packages... 4390.2 ms ✓ MacroTools 841.4 ms ✓ Reexport 1709.7 ms ✓ IrrationalConstants 804.0 ms ✓ DataValueInterfaces 930.2 ms ✓ StatsAPI 956.6 ms ✓ ArgCheck 1039.8 ms ✓ TupleTools 881.4 ms ✓ LaTeXStrings 1165.7 ms ✓ Statistics 1009.9 ms ✓ StaticArraysCore 817.7 ms ✓ IfElse 867.1 ms ✓ PtrArrays 962.8 ms ✓ ManualMemory 899.4 ms ✓ DataAPI 926.9 ms ✓ SciMLPublic 822.5 ms ✓ CommonWorldInvalidations 924.9 ms ✓ InvertedIndices 946.9 ms ✓ InverseFunctions 2046.4 ms ✓ FillArrays 836.3 ms ✓ UnPack 1343.1 ms ✓ OrderedCollections 826.1 ms ✓ SIMDTypes 822.6 ms ✓ IteratorInterfaceExtensions 911.2 ms ✓ PackageExtensionCompat 1937.0 ms ✓ Crayons 1064.4 ms ✓ NaNMath 1244.2 ms ✓ Requires 1567.8 ms ✓ SuiteSparse 1919.6 ms ✓ CpuId 5606.4 ms ✓ Parsers 2850.5 ms ✓ SentinelArrays 1815.9 ms ✓ ProgressMeter 1193.1 ms ✓ Compat 1203.8 ms ✓ Preferences 1210.7 ms ✓ DocStringExtensions 1723.7 ms ✓ CommonSubexpressions 1319.2 ms ✓ Statistics → SparseArraysExt 918.2 ms ✓ DiffResults 1004.1 ms ✓ AliasTables 1052.7 ms ✓ Missings 1070.1 ms ✓ PooledArrays 895.4 ms ✓ InverseFunctions → InverseFunctionsDatesExt 1809.1 ms ✓ InverseFunctions → InverseFunctionsTestExt 1672.9 ms ✓ FillArrays → FillArraysSparseArraysExt 1005.4 ms ✓ FillArrays → FillArraysStatisticsExt 1010.9 ms ✓ Parameters 857.1 ms ✓ TableTraits 990.7 ms ✓ StridedViews 979.4 ms ✓ Adapt 1883.9 ms ✓ PDMats 8569.7 ms ✓ JSON 840.2 ms ✓ Compat → CompatLinearAlgebraExt 951.0 ms ✓ PrecompileTools 1249.8 ms ✓ JLLWrappers 1126.5 ms ✓ SnoopPrecompile 1332.4 ms ✓ LogExpFunctions 1819.1 ms ✓ Tables 796.4 ms ✓ StridedViews → StridedViewsPtrArraysExt 1246.9 ms ✓ Strided 1203.5 ms ✓ ArrayInterface 1320.4 ms ✓ Adapt → AdaptSparseArraysExt 1379.7 ms ✓ GPUArraysCore 1479.2 ms ✓ FillArrays → FillArraysPDMatsExt 2877.8 ms ✓ BenchmarkTools 3181.2 ms ✓ ChainRulesCore 4263.7 ms ✓ DataStructures 3280.8 ms ✓ StringManipulation 13409.8 ms ✓ StaticArrays 2893.9 ms ✓ RecipesBase 5369.2 ms ✓ Static 1427.8 ms ✓ Rmath_jll 1434.6 ms ✓ OpenSpecFun_jll 849.0 ms ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt WARNING: Constructor for type "UInt64" was extended in `CSV` without explicit qualification or import.  NOTE: Assumed "UInt64" refers to `Base.UInt64`. This behavior is deprecated and may differ in future versions.  NOTE: This behavior may have differed in Julia versions prior to 1.12.  Hint: If you intended to create a new generic function of the same name, use `function UInt64 end`.  Hint: To silence the warning, qualify `UInt64` as `Base.UInt64` in the method signature or explicitly `import Base: UInt64`. 13453.8 ms ✓ CSV 811.7 ms ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 1360.0 ms ✓ ArrayInterface → ArrayInterfaceSparseArraysExt 831.9 ms ✓ ArrayInterface → ArrayInterfaceGPUArraysCoreExt 1304.1 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 1271.9 ms ✓ LazyStack 1510.5 ms ✓ TransmuteDims 3187.5 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 951.1 ms ✓ ArrayInterface → ArrayInterfaceChainRulesCoreExt 1544.0 ms ✓ SortingAlgorithms 2835.1 ms ✓ QuadGK 25894.7 ms ✓ PrettyTables 1396.3 ms ✓ StaticArrays → StaticArraysStatisticsExt 1432.7 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 1308.9 ms ✓ Adapt → AdaptStaticArraysExt 928.9 ms ✓ BitTwiddlingConvenienceFunctions 2308.0 ms ✓ CPUSummary 3831.2 ms ✓ StaticArrayInterface 1565.9 ms ✓ Rmath 4828.8 ms ✓ SpecialFunctions 8828.1 ms ✓ StatsBase 57813.8 ms ✓ DataFrames 20508.5 ms ✓ TensorCast 2083.7 ms ✓ HostCPUFeatures 2020.3 ms ✓ StaticArrayInterface → StaticArrayInterfaceStaticArraysExt 1361.7 ms ✓ LayoutPointers 4058.9 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 1346.7 ms ✓ DiffRules 3104.9 ms ✓ MCMCDiagnostics 16214.5 ms ✓ VectorizationBase 5034.4 ms ✓ StatsFuns 8415.7 ms ✓ ForwardDiff 4430.8 ms ✓ SLEEFPirates 14131.3 ms ✓ Distributions 2676.3 ms ✓ ForwardDiff → ForwardDiffStaticArraysExt 3963.7 ms ✓ TransformVariables 4331.2 ms ✓ Distributions → DistributionsTestExt 5738.4 ms ✓ Distributions → DistributionsChainRulesCoreExt 4031.7 ms ✓ LogDensityProblems 10933.2 ms ✓ MonteCarloMeasurements 14228.6 ms ✓ DynamicHMC 8500.1 ms ✓ DynamicHMCModels 115 dependencies successfully precompiled in 406 seconds. 38 already precompiled. 1 dependency had output during precompilation: ┌ CSV │ WARNING: Constructor for type "UInt64" was extended in `CSV` without explicit qualification or import. │ NOTE: Assumed "UInt64" refers to `Base.UInt64`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function UInt64 end`. │ Hint: To silence the warning, qualify `UInt64` as `Base.UInt64` in the method signature or explicitly `import Base: UInt64`. └ Precompilation completed after 417.26s ################################################################################ # Testing # Testing DynamicHMCModels Status `/tmp/jl_kKuCx6/Project.toml` ⌅ [336ed68f] CSV v0.8.5 ⌃ [a93c6f00] DataFrames v1.4.4 [31c24e10] Distributions v0.25.122 ⌃ [bbc10e6e] DynamicHMC v3.3.0 [6266e5bf] DynamicHMCModels v2.1.4 ⌅ [6fdf6af0] LogDensityProblems v0.10.6 ⌅ [6e857e4b] MCMCDiagnostics v0.3.0 ⌅ [0987c9cc] MonteCarloMeasurements v0.10.4 [d96e819e] Parameters v0.12.3 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [10745b16] Statistics v1.11.1 ⌅ [4c63d2b9] StatsFuns v0.9.18 ⌅ [84d833dd] TransformVariables v0.3.12 [37e2e46d] LinearAlgebra v1.13.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_kKuCx6/Manifest.toml` [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [dce04be8] ArgCheck v2.5.0 [4fba245c] ArrayInterface v7.22.0 ⌅ [6e4b80f9] BenchmarkTools v0.7.0 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [2a0fbf3d] CPUSummary v0.2.7 ⌅ [336ed68f] CSV v0.8.5 [d360d2e6] ChainRulesCore v1.26.0 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 ⌃ [a93c6f00] DataFrames v1.4.4 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [31c24e10] Distributions v0.25.122 ⌅ [ffbed154] DocStringExtensions v0.8.6 ⌃ [bbc10e6e] DynamicHMC v3.3.0 [6266e5bf] DynamicHMCModels v2.1.4 [1a297f60] FillArrays v1.15.0 ⌅ [f6369f11] ForwardDiff v0.10.39 [46192b85] GPUArraysCore v0.2.0 [3e5b6fbb] HostCPUFeatures v0.1.17 [615f187c] IfElse v0.1.1 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 ⌅ [92d709cd] IrrationalConstants v0.1.1 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 ⌅ [682c06a0] JSON v0.21.4 [b964fa9f] LaTeXStrings v1.4.0 [10f19ff3] LayoutPointers v0.1.17 [1fad7336] LazyStack v0.1.3 ⌅ [6fdf6af0] LogDensityProblems v0.10.6 [2ab3a3ac] LogExpFunctions v0.3.29 ⌅ [6e857e4b] MCMCDiagnostics v0.3.0 [1914dd2f] MacroTools v0.5.16 [d125e4d3] ManualMemory v0.1.8 [e1d29d7a] Missings v1.2.0 ⌅ [0987c9cc] MonteCarloMeasurements v0.10.4 [77ba4419] NaNMath v1.1.3 [bac558e1] OrderedCollections v1.8.1 ⌃ [90014a1f] PDMats v0.11.35 [65ce6f38] PackageExtensionCompat v1.0.2 [d96e819e] Parameters v0.12.3 ⌅ [69de0a69] Parsers v1.1.2 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 ⌅ [08abe8d2] PrettyTables v2.4.0 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 ⌅ [79098fc4] Rmath v0.7.1 [94e857df] SIMDTypes v0.1.0 [476501e8] SLEEFPirates v0.6.43 [431bcebd] SciMLPublic v1.0.0 [91c51154] SentinelArrays v1.4.8 [66db9d55] SnoopPrecompile v1.0.3 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.6.1 [aedffcd0] Static v1.3.1 [0d7ed370] StaticArrayInterface v1.8.0 [90137ffa] StaticArrays v1.9.15 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 ⌅ [2913bbd2] StatsBase v0.33.21 ⌅ [4c63d2b9] StatsFuns v0.9.18 [5e0ebb24] Strided v2.3.2 [4db3bf67] StridedViews v0.4.1 [892a3eda] StringManipulation v0.4.2 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [02d47bb6] TensorCast v0.4.9 ⌅ [84d833dd] TransformVariables v0.3.12 [24ddb15e] TransmuteDims v0.1.17 [9d95972d] TupleTools v1.6.0 [3a884ed6] UnPack v1.0.2 [3d5dd08c] VectorizationBase v0.21.72 [efe28fd5] OpenSpecFun_jll v0.5.6+0 ⌅ [f50d1b31] Rmath_jll v0.4.3+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.17.0+0 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.11.4 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.68.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... ┌ Warning: Error requiring `ForwardDiff` from `LogDensityProblems` │ exception = │ LoadError: ConcurrencyViolationError("deadlock detected in loading Unicode using Unicode (while loading StaticArraysStatisticsExt and VectorizationBase and Static and IteratorInterfaceExtensions and StatsAPI and AliasTables and LaTeXStrings and SpecialFunctionsChainRulesCoreExt and StatsFuns and ArrayInterfaceChainRulesCoreExt and StaticArrays and DataStructures and Crayons and Distributions and InteractiveUtils and CPUSummary and Parsers and LazyStack and ForwardDiffStaticArraysExt and FillArraysStatisticsExt and Rmath_jll and LogExpFunctionsInverseFunctionsExt and ProgressMeter and StaticArrayInterface and TransmuteDims and HostCPUFeatures and SuiteSparse_jll and DistributionsChainRulesCoreExt and Compat and Strided and BitTwiddlingConvenienceFunctions and SuiteSparse and Missings and JuliaSyntaxHighlighting and IfElse and Future and Statistics and ArrayInterfaceStaticArraysCoreExt and Mmap and SortingAlgorithms and ManualMemory and FillArraysPDMatsExt and PDMats and CpuId and SLEEFPirates and Markdown and DynamicHMC and InverseFunctions and Serialization and AdaptSparseArraysExt and Tables and AdaptStaticArraysExt and DataFrames and PackageExtensionCompat and StringManipulation and PrettyTables and Base64 and SciMLPublic and GPUArraysCore and BenchmarkTools and ArrayInterfaceGPUArraysCoreExt and PrecompileTools and MonteCarloMeasurements and StridedViewsPtrArraysExt and InvertedIndices and RecipesBase and SparseArrays and SentinelArrays and PooledArrays and LogExpFunctionsChainRulesCoreExt and ArrayInterface and ChainRulesCoreSparseArraysExt and StatsBase and SnoopPrecompile and Distributed and Rmath and LayoutPointers and Adapt and REPL and SparseArraysExt and StaticArraysChainRulesCoreExt and TableTraits and ArrayInterfaceSparseArraysExt and PtrArrays and TupleTools and CSV and FillArrays and InverseFunctionsDatesExt and DataValueInterfaces and FillArraysSparseArraysExt and CommonWorldInvalidations and DynamicHMCModels and ChainRulesCore and CompatLinearAlgebraExt and StaticArrayInterfaceStaticArraysExt and DataAPI and StridedViews and StyledStrings and QuadGK and SIMDTypes and TensorCast and LogDensityProblems)") │ Stacktrace: │ [1] canstart_loading(modkey::Base.PkgId, build_id::UInt128, stalecheck::Bool) │ @ Base ./loading.jl:2270 │ [2] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String}) │ @ Base ./loading.jl:2104 │ [3] _require_search_from_serialized │ @ ./loading.jl:2069 [inlined] │ [4] __require_prelocked(pkg::Base.PkgId, env::String) │ @ Base ./loading.jl:2719 │ [5] _require_prelocked(uuidkey::Base.PkgId, env::String) │ @ Base ./loading.jl:2585 │ [6] macro expansion │ @ ./loading.jl:2513 [inlined] │ [7] macro expansion │ @ ./lock.jl:376 [inlined] │ [8] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2477 │ [9] require │ @ ./loading.jl:2453 [inlined] │ [10] eval_import_path │ @ ./module.jl:36 [inlined] │ [11] eval_import_path_all(at::Module, path::Expr, keyword::String) │ @ Base ./module.jl:60 │ [12] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr}) │ @ Base ./module.jl:101 │ [13] top-level scope │ @ ~/.julia/packages/LogDensityProblems/mTlVj/src/AD_ForwardDiff.jl:6 │ [14] include(mapexpr::Function, mod::Module, _path::String) │ @ Base ./Base.jl:310 │ [15] top-level scope │ @ ~/.julia/packages/Requires/1eCOK/src/Requires.jl:40 │ [16] eval(m::Module, e::Any) │ @ Core ./boot.jl:489 │ [17] EvalInto │ @ ./boot.jl:494 [inlined] │ [18] (::LogDensityProblems.var"#__init__##10#__init__##11")() │ @ LogDensityProblems ~/.julia/packages/Requires/1eCOK/src/require.jl:101 │ [19] macro expansion │ @ ./timing.jl:502 [inlined] │ [20] err(f::Any, listener::Module, modname::String, file::String, line::Any) │ @ Requires ~/.julia/packages/Requires/1eCOK/src/require.jl:47 │ [21] (::LogDensityProblems.var"#__init__##8#__init__##9")() │ @ LogDensityProblems ~/.julia/packages/Requires/1eCOK/src/require.jl:100 │ [22] withpath(f::Any, path::String) │ @ Requires ~/.julia/packages/Requires/1eCOK/src/require.jl:37 │ [23] (::LogDensityProblems.var"#__init__##6#__init__##7")() │ @ LogDensityProblems ~/.julia/packages/Requires/1eCOK/src/require.jl:99 │ [24] listenpkg(f::Any, pkg::Base.PkgId) │ @ Requires ~/.julia/packages/Requires/1eCOK/src/require.jl:20 │ [25] macro expansion │ @ ~/.julia/packages/Requires/1eCOK/src/require.jl:98 [inlined] │ [26] __init__() │ @ LogDensityProblems ~/.julia/packages/LogDensityProblems/mTlVj/src/LogDensityProblems.jl:234 │ [27] run_module_init(mod::Module, i::Int64) │ @ Base ./loading.jl:1467 │ [28] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) │ @ Base ./loading.jl:1455 │ [29] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}; register::Bool) │ @ Base ./loading.jl:1343 │ [30] _include_from_serialized │ @ ./loading.jl:1300 [inlined] │ [31] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String}) │ @ Base ./loading.jl:2162 │ [32] _require_search_from_serialized │ @ ./loading.jl:2069 [inlined] │ [33] __require_prelocked(pkg::Base.PkgId, env::String) │ @ Base ./loading.jl:2719 │ [34] _require_prelocked(uuidkey::Base.PkgId, env::String) │ @ Base ./loading.jl:2585 │ [35] macro expansion │ @ ./loading.jl:2513 [inlined] │ [36] macro expansion │ @ ./lock.jl:376 [inlined] │ [37] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2477 │ [38] require │ @ ./loading.jl:2453 [inlined] │ [39] eval_import_path │ @ ./module.jl:36 [inlined] │ [40] eval_import_path_all(at::Module, path::Expr, keyword::String) │ @ Base ./module.jl:60 │ [41] _eval_using │ @ ./module.jl:137 [inlined] │ [42] _eval_using(to::Module, path::Expr) │ @ Base ./module.jl:137 │ [43] top-level scope │ @ ~/.julia/packages/DynamicHMCModels/BZpqo/test/runtests.jl:1 │ [44] include(mapexpr::Function, mod::Module, _path::String) │ @ Base ./Base.jl:310 │ [45] top-level scope │ @ none:6 │ [46] eval(m::Module, e::Any) │ @ Core ./boot.jl:489 │ [47] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:310 │ [48] _start() │ @ Base ./client.jl:577 │ in expression starting at /home/pkgeval/.julia/packages/LogDensityProblems/mTlVj/src/AD_ForwardDiff.jl:6 └ @ Requires ~/.julia/packages/Requires/1eCOK/src/require.jl:51 * ../scripts/02/m2.1d.jl * [ Info: Don't know how to AD with ForwardDiff, consider `import ForwardDiff` if there is such a package. ERROR: LoadError: MethodError: no method matching ADgradient(::Val{:ForwardDiff}, ::TransformedLogDensity{TransformVariables.TransformTuple{@NamedTuple{p::TransformVariables.ScaledShiftedLogistic{Float64}}}, BernoulliProblem}) This error has been manually thrown, explicitly, so the method may exist but be intentionally marked as unimplemented. Closest candidates are: ADgradient(::Val{kind}, ::Any; kwargs...) where kind @ LogDensityProblems ~/.julia/packages/LogDensityProblems/mTlVj/src/LogDensityProblems.jl:223 ADgradient(!Matched::Symbol, ::Any; kwargs...) @ LogDensityProblems ~/.julia/packages/LogDensityProblems/mTlVj/src/LogDensityProblems.jl:221 Stacktrace: [1] ADgradient(v::Val{:ForwardDiff}, P::TransformedLogDensity{TransformVariables.TransformTuple{@NamedTuple{p::TransformVariables.ScaledShiftedLogistic{Float64}}}, BernoulliProblem}; kwargs::@Kwargs{}) @ LogDensityProblems ~/.julia/packages/LogDensityProblems/mTlVj/src/LogDensityProblems.jl:225 [2] ADgradient(v::Val{:ForwardDiff}, P::TransformedLogDensity{TransformVariables.TransformTuple{@NamedTuple{p::TransformVariables.ScaledShiftedLogistic{Float64}}}, BernoulliProblem}) @ LogDensityProblems ~/.julia/packages/LogDensityProblems/mTlVj/src/LogDensityProblems.jl:223 [3] ADgradient(kind::Symbol, P::TransformedLogDensity{TransformVariables.TransformTuple{@NamedTuple{p::TransformVariables.ScaledShiftedLogistic{Float64}}}, BernoulliProblem}; kwargs::@Kwargs{}) @ LogDensityProblems ~/.julia/packages/LogDensityProblems/mTlVj/src/LogDensityProblems.jl:221 [4] top-level scope @ ~/.julia/packages/DynamicHMCModels/BZpqo/scripts/02/m2.1d.jl:36 [5] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [6] top-level scope @ ~/.julia/packages/DynamicHMCModels/BZpqo/test/runtests.jl:20 [7] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [8] top-level scope @ none:6 [9] eval(m::Module, e::Any) @ Core ./boot.jl:489 [10] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [11] _start() @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/DynamicHMCModels/BZpqo/scripts/02/m2.1d.jl:36 in expression starting at /home/pkgeval/.julia/packages/DynamicHMCModels/BZpqo/test/runtests.jl:18 Testing failed after 37.68s ERROR: LoadError: Package DynamicHMCModels errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2946 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2795 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:572 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:548 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [12] include(mod::Module, _path::String) @ Base ./Base.jl:309 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 502.05s: package tests unexpectedly errored