Package evaluation to test Coulter on Julia 1.14.0-DEV.1299 (6d6224db99*) started at 2025-11-27T16:38:18.800 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.72s ################################################################################ # Installation # Installing Coulter... Resolving package versions... Installed oneTBB_jll ────────────── v2022.0.0+1 Installed MKL_jll ───────────────── v2025.2.0+0 Installed Rmath_jll ─────────────── v0.5.1+0 Installed HypergeometricFunctions ─ v0.3.28 Installed KernelDensity ─────────── v0.6.10 Installed Adapt ─────────────────── v4.4.0 Installed FillArrays ────────────── v1.15.0 Installed DataStructures ────────── v0.18.22 Installed AliasTables ───────────── v1.1.3 Installed OrderedCollections ────── v1.8.1 Installed StatsAPI ──────────────── v1.7.1 Installed DataAPI ───────────────── v1.16.0 Installed Compat ────────────────── v4.18.1 Installed StatsBase ─────────────── v0.34.8 Installed Statistics ────────────── v1.11.1 Installed PrecompileTools ───────── v1.3.3 Installed StaticArraysCore ──────── v1.4.4 Installed IrrationalConstants ───── v0.2.6 Installed OffsetArrays ──────────── v1.17.0 Installed AbstractFFTs ──────────── v1.5.0 Installed IntelOpenMP_jll ───────── v2025.2.0+0 Installed FileIO ────────────────── v1.17.1 Installed StaticArrays ──────────── v1.9.15 Installed ChainRulesCore ────────── v1.26.0 Installed Ratios ────────────────── v0.4.5 Installed OpenSpecFun_jll ───────── v0.5.6+0 Installed QuadGK ────────────────── v2.11.2 Installed AxisAlgorithms ────────── v1.1.0 Installed Requires ──────────────── v1.3.1 Installed LogExpFunctions ───────── v0.3.29 Installed Rmath ─────────────────── v0.9.0 Installed StatsFuns ─────────────── v1.5.2 Installed WoodburyMatrices ──────── v1.0.0 Installed PtrArrays ─────────────── v1.3.0 Installed Reexport ──────────────── v1.2.2 Installed SpecialFunctions ──────── v2.6.1 Installed Interpolations ────────── v0.16.2 Installed Distributions ─────────── v0.25.122 Installed Missings ──────────────── v1.2.0 Installed FFTW_jll ──────────────── v3.3.11+0 Installed Preferences ───────────── v1.5.0 Installed FFTW ──────────────────── v1.10.0 Installed JLLWrappers ───────────── v1.7.1 Installed PDMats ────────────────── v0.11.36 Installed SortingAlgorithms ─────── v1.2.2 Installed DocStringExtensions ───── v0.9.5 Installed Coulter ───────────────── v0.4.0 Installing 3 artifacts Installed artifact Rmath 121.9 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact FFTW 2.2 MiB Updating `~/.julia/environments/v1.14/Project.toml` [a3d351dc] + Coulter v0.4.0 Updating `~/.julia/environments/v1.14/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [13072b0f] + AxisAlgorithms v1.1.0 [d360d2e6] + ChainRulesCore v1.26.0 [34da2185] + Compat v4.18.1 [a3d351dc] + Coulter v0.4.0 [9a962f9c] + DataAPI v1.16.0 ⌅ [864edb3b] + DataStructures v0.18.22 [31c24e10] + Distributions v0.25.122 [ffbed154] + DocStringExtensions v0.9.5 [7a1cc6ca] + FFTW v1.10.0 [5789e2e9] + FileIO v1.17.1 [1a297f60] + FillArrays v1.15.0 [34004b35] + HypergeometricFunctions v0.3.28 [a98d9a8b] + Interpolations v0.16.2 [92d709cd] + IrrationalConstants v0.2.6 [692b3bcd] + JLLWrappers v1.7.1 [5ab0869b] + KernelDensity v0.6.10 [2ab3a3ac] + LogExpFunctions v0.3.29 [e1d29d7a] + Missings v1.2.0 [6fe1bfb0] + OffsetArrays v1.17.0 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.36 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [c84ed2f1] + Ratios v0.4.5 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.8 [4c63d2b9] + StatsFuns v1.5.2 [efce3f68] + WoodburyMatrices v1.0.0 [f5851436] + FFTW_jll v3.3.11+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [856f044c] + MKL_jll v2025.2.0+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.17.0+0 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.68.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 8.81s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... WARNING: Imported binding Operations.project_rel_path was undeclared at import time during import to TestEnv. 4684.7 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. 1 dependency had output during precompilation: ┌ TestEnv │ WARNING: Imported binding Operations.project_rel_path was undeclared at import time during import to TestEnv. └ ┌ Error: Failed to use TestEnv.jl; test dependencies will not be precompiled │ exception = │ UndefVarError: `project_rel_path` not defined in `TestEnv` │ Suggestion: this global was defined as `Pkg.Operations.project_rel_path` but not assigned a value. │ Stacktrace: │ [1] get_test_dir(ctx::Pkg.Types.Context, pkgspec::PackageSpec) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:75 │ [2] test_dir_has_project_file │ @ ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:52 [inlined] │ [3] maybe_gen_project_override! │ @ ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:83 [inlined] │ [4] activate(pkg::String; allow_reresolve::Bool) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/activate_set.jl:12 │ [5] activate(pkg::String) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/activate_set.jl:9 │ [6] top-level scope │ @ /PkgEval.jl/scripts/precompile.jl:24 │ [7] include(mod::Module, _path::String) │ @ Base ./Base.jl:309 │ [8] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:344 │ [9] _start() │ @ Base ./client.jl:577 └ @ Main /PkgEval.jl/scripts/precompile.jl:26 Precompiling package dependencies... Precompiling packages... 831.5 ms ✓ Reexport 1120.8 ms ✓ Statistics 912.0 ms ✓ DataAPI 2033.0 ms ✓ IrrationalConstants 1007.4 ms ✓ StaticArraysCore 843.1 ms ✓ StatsAPI 1150.2 ms ✓ Requires 1229.8 ms ✓ OrderedCollections 1131.8 ms ✓ DocStringExtensions 1071.4 ms ✓ AbstractFFTs 1609.9 ms ✓ OffsetArrays 1380.6 ms ✓ WoodburyMatrices 2018.5 ms ✓ FillArrays 850.3 ms ✓ PtrArrays 1271.4 ms ✓ SuiteSparse 1141.1 ms ✓ Compat 1127.9 ms ✓ Preferences 1342.0 ms ✓ Statistics → SparseArraysExt 1012.0 ms ✓ Missings 933.4 ms ✓ Adapt 855.4 ms ✓ Ratios 9138.5 ms ✓ FileIO 1392.1 ms ✓ LogExpFunctions 1370.4 ms ✓ AxisAlgorithms 1518.7 ms ✓ FillArrays → FillArraysSparseArraysExt 997.6 ms ✓ FillArrays → FillArraysStatisticsExt 973.1 ms ✓ AliasTables 1846.5 ms ✓ PDMats 885.2 ms ✓ Compat → CompatLinearAlgebraExt 1364.1 ms ✓ JLLWrappers 1130.6 ms ✓ PrecompileTools 1441.1 ms ✓ Adapt → AdaptSparseArraysExt 972.4 ms ✓ OffsetArrays → OffsetArraysAdaptExt 1471.8 ms ✓ FillArrays → FillArraysPDMatsExt 2661.6 ms ✓ ChainRulesCore 3921.8 ms ✓ DataStructures 5133.7 ms ✓ IntelOpenMP_jll 5302.0 ms ✓ oneTBB_jll 1678.2 ms ✓ FFTW_jll 1486.0 ms ✓ Rmath_jll 1529.4 ms ✓ OpenSpecFun_jll 13412.3 ms ✓ StaticArrays 1415.6 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 947.9 ms ✓ AbstractFFTs → AbstractFFTsChainRulesCoreExt 2865.2 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 1552.2 ms ✓ SortingAlgorithms 2820.7 ms ✓ QuadGK  Downloading artifact: IntelOpenMP  Downloading artifact: oneTBB 10463.2 ms ✓ MKL_jll 1496.2 ms ✓ Rmath 5076.9 ms ✓ SpecialFunctions 1326.0 ms ✓ StaticArrays → StaticArraysStatisticsExt 1480.3 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 1428.3 ms ✓ Adapt → AdaptStaticArraysExt 5120.9 ms ✓ StatsBase 6712.8 ms ✓ FFTW 3980.4 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 2511.3 ms ✓ HypergeometricFunctions 4952.5 ms ✓ Interpolations 2116.0 ms ✓ PDMats → StatsBaseExt 2752.9 ms ✓ StatsFuns 3342.6 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 9136.7 ms ✓ Distributions 3475.6 ms ✓ Distributions → DistributionsChainRulesCoreExt 4367.8 ms ✓ KernelDensity 4308.0 ms ✓ Coulter 65 dependencies successfully precompiled in 168 seconds. 36 already precompiled. 1 dependency had output during precompilation: ┌ MKL_jll │ Downloading artifact: IntelOpenMP │ Downloading artifact: oneTBB └ Precompilation completed after 182.63s ################################################################################ # Testing # Testing Coulter Status `/tmp/jl_wMTa6s/Project.toml` [a3d351dc] Coulter v0.4.0 ⌅ [864edb3b] DataStructures v0.18.22 [31c24e10] Distributions v0.25.122 [5789e2e9] FileIO v1.17.1 [5ab0869b] KernelDensity v0.6.10 [860ef19b] StableRNGs v1.0.4 [2913bbd2] StatsBase v0.34.8 [ade2ca70] Dates v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_wMTa6s/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [13072b0f] AxisAlgorithms v1.1.0 [d360d2e6] ChainRulesCore v1.26.0 [34da2185] Compat v4.18.1 [a3d351dc] Coulter v0.4.0 [9a962f9c] DataAPI v1.16.0 ⌅ [864edb3b] DataStructures v0.18.22 [31c24e10] Distributions v0.25.122 [ffbed154] DocStringExtensions v0.9.5 [7a1cc6ca] FFTW v1.10.0 [5789e2e9] FileIO v1.17.1 [1a297f60] FillArrays v1.15.0 [34004b35] HypergeometricFunctions v0.3.28 [a98d9a8b] Interpolations v0.16.2 [92d709cd] IrrationalConstants v0.2.6 [692b3bcd] JLLWrappers v1.7.1 [5ab0869b] KernelDensity v0.6.10 [2ab3a3ac] LogExpFunctions v0.3.29 [e1d29d7a] Missings v1.2.0 [6fe1bfb0] OffsetArrays v1.17.0 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.36 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [c84ed2f1] Ratios v0.4.5 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.6.1 [860ef19b] StableRNGs v1.0.4 [90137ffa] StaticArrays v1.9.15 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.8 [4c63d2b9] StatsFuns v1.5.2 [efce3f68] WoodburyMatrices v1.0.0 [f5851436] FFTW_jll v3.3.11+0 [1d5cc7b8] IntelOpenMP_jll v2025.2.0+0 [856f044c] MKL_jll v2025.2.0+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [1317d2d5] oneTBB_jll v2022.0.0+1 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.13.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.17.0+0 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.11.4 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.68.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Test Summary: | Pass Total Time Loading | 10 10 7.7s ┌ Warning: Multiple viable peaks identified: 10.5, 16.0 └ @ Coulter ~/.julia/packages/Coulter/tlb4h/src/analysis.jl:92 Peak-finding: Test Failed at /home/pkgeval/.julia/packages/Coulter/tlb4h/test/runtests.jl:74 Expression: all(peaks .- volume.([8.2, 9.6]) .< 10) Evaluated: all(Bool[0, 1]) Stacktrace: [1] top-level scope @ ~/.julia/packages/Coulter/tlb4h/test/runtests.jl:44 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [3] macro expansion @ ~/.julia/packages/Coulter/tlb4h/test/runtests.jl:46 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [5] macro expansion @ ~/.julia/packages/Coulter/tlb4h/test/runtests.jl:74 [inlined] [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:753 [inlined] Test Summary: | Pass Fail Total Time Analysis | 2 1 3 13.7s Peak-finding | 2 1 3 13.7s RNG of the outermost testset: Random.Xoshiro(0x785568a2d68fce75, 0xda11ac76ed560441, 0xc5c39f963e3a2886, 0x73203f770e4660ef, 0x093e483839a14c5f) ERROR: LoadError: Some tests did not pass: 2 passed, 1 failed, 0 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/Coulter/tlb4h/test/runtests.jl:43 Testing failed after 46.95s ERROR: LoadError: Package Coulter errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2946 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2795 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:572 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:548 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [12] include(mod::Module, _path::String) @ Base ./Base.jl:309 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 270.62s: package has test failures