Package evaluation to test Bactos on Julia 1.14.0-DEV.1299 (6d6224db99*) started at 2025-11-27T23:28:49.920 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.99s ################################################################################ # Installation # Installing Bactos... Resolving package versions... Installed MKL_jll ───────────────────────────── v2025.2.0+0 Installed CommonWorldInvalidations ──────────── v1.0.0 Installed FastPower ─────────────────────────── v1.2.0 Installed InlineStrings ─────────────────────── v1.4.5 Installed SIMDTypes ─────────────────────────── v0.1.0 Installed OrderedCollections ────────────────── v1.8.1 Installed NearestNeighbors ──────────────────── v0.4.24 Installed OrdinaryDiffEqRosenbrock ──────────── v1.18.1 Installed SimpleWeightedGraphs ──────────────── v1.5.0 Installed SpatialIndexing ───────────────────── v0.1.6 Installed PreallocationTools ────────────────── v0.4.34 Installed NonlinearSolveSpectralMethods ─────── v1.6.0 Installed OrdinaryDiffEqExponentialRK ───────── v1.8.0 Installed EnzymeCore ────────────────────────── v0.8.17 Installed CpuId ─────────────────────────────── v0.3.1 Installed OrdinaryDiffEqFIRK ────────────────── v1.16.0 Installed NaNMath ───────────────────────────── v1.1.3 Installed SentinelArrays ────────────────────── v1.4.8 Installed FiniteDifferences ─────────────────── v0.12.33 Installed Distances ─────────────────────────── v0.10.12 Installed QuadGK ────────────────────────────── v2.11.2 Installed StaticArrayInterface ──────────────── v1.8.0 Installed FileIO ────────────────────────────── v1.17.1 Installed OrdinaryDiffEqQPRK ────────────────── v1.4.0 Installed OpenSpecFun_jll ───────────────────── v0.5.6+0 Installed EnumX ─────────────────────────────── v1.0.5 Installed FastBroadcast ─────────────────────── v0.3.5 Installed Tables ────────────────────────────── v1.12.1 Installed NonlinearSolveBase ────────────────── v2.4.0 Installed NLSolversBase ─────────────────────── v7.10.0 Installed LinearSolve ───────────────────────── v3.48.0 Installed OrdinaryDiffEqLowOrderRK ──────────── v1.6.0 Installed BracketingNonlinearSolve ──────────── v1.6.0 Installed Reexport ──────────────────────────── v1.2.2 Installed DiffEqBase ────────────────────────── v6.192.0 Installed InverseFunctions ──────────────────── v0.1.17 Installed Jieko ─────────────────────────────── v0.2.1 Installed Preferences ───────────────────────── v1.5.0 Installed Missings ──────────────────────────── v1.2.0 Installed Static ────────────────────────────── v1.3.1 Installed TableTraits ───────────────────────── v1.0.1 Installed MaybeInplace ──────────────────────── v0.1.4 Installed LaTeXStrings ──────────────────────── v1.4.0 Installed OrdinaryDiffEqNordsieck ───────────── v1.4.0 Installed OrdinaryDiffEqAdamsBashforthMoulton ─ v1.5.0 Installed NonlinearSolve ────────────────────── v4.12.0 Installed SortingAlgorithms ─────────────────── v1.2.2 Installed Crayons ───────────────────────────── v4.1.1 Installed OrdinaryDiffEqLinear ──────────────── v1.6.0 Installed UnPack ────────────────────────────── v1.0.2 Installed ADTypes ───────────────────────────── v1.19.0 Installed Inflate ───────────────────────────── v0.1.5 Installed RecursiveArrayTools ───────────────── v3.39.0 Installed MacroTools ────────────────────────── v0.5.16 Installed DataStructures ────────────────────── v0.18.22 Installed GenericSchur ──────────────────────── v0.5.6 Installed URIs ──────────────────────────────── v1.6.1 Installed DiffResults ───────────────────────── v1.1.0 Installed ManualMemory ──────────────────────── v0.1.8 Installed Quaternions ───────────────────────── v0.7.7 Installed FillArrays ────────────────────────── v1.15.0 Installed SparseMatrixColorings ─────────────── v0.4.23 Installed ArnoldiMethod ─────────────────────── v0.4.0 Installed oneTBB_jll ────────────────────────── v2022.0.0+1 Installed CodecZlib ─────────────────────────── v0.7.8 Installed IntelOpenMP_jll ───────────────────── v2025.2.0+0 Installed SciMLJacobianOperators ────────────── v0.1.11 Installed ExprTools ─────────────────────────── v0.1.10 Installed ArrayInterface ────────────────────── v7.22.0 Installed StatsBase ─────────────────────────── v0.34.8 Installed DataValueInterfaces ───────────────── v1.0.0 Installed Richardson ────────────────────────── v1.4.2 Installed CommonSubexpressions ──────────────── v0.3.1 Installed RealDot ───────────────────────────── v0.1.0 Installed LayoutPointers ────────────────────── v0.1.17 Installed LoggingExtras ─────────────────────── v1.2.0 Installed ConcreteStructs ───────────────────── v0.2.3 Installed QuickHeaps ────────────────────────── v0.1.2 Installed GPUArraysCore ─────────────────────── v0.2.0 Installed TruncatedStacktraces ──────────────── v1.4.0 Installed IrrationalConstants ───────────────── v0.2.6 Installed ArrayLayouts ──────────────────────── v1.12.2 Installed HTTP ──────────────────────────────── v1.10.19 Installed SimpleTraits ──────────────────────── v0.9.5 Installed OrdinaryDiffEqRKN ─────────────────── v1.5.0 Installed BitFlags ──────────────────────────── v0.1.9 Installed Bactos ────────────────────────────── v0.0.1 Installed OrdinaryDiffEqExtrapolation ───────── v1.9.0 Installed OrdinaryDiffEqStabilizedIRK ───────── v1.6.0 Installed Agents ────────────────────────────── v5.17.2 Installed MetaGraphs ────────────────────────── v0.7.2 Installed Setfield ──────────────────────────── v1.1.2 Installed Scratch ───────────────────────────── v1.3.0 Installed SimpleBufferStream ────────────────── v1.2.0 Installed PooledArrays ──────────────────────── v1.4.3 Installed OrdinaryDiffEqPRK ─────────────────── v1.4.0 Installed NonlinearSolveQuasiNewton ─────────── v1.11.0 Installed WorkerUtilities ───────────────────── v1.6.1 Installed PDMats ────────────────────────────── v0.11.36 Installed DocStringExtensions ───────────────── v0.9.5 Installed Moshi ─────────────────────────────── v0.3.7 Installed DifferentiationInterface ──────────── v0.7.12 Installed CompositionsBase ──────────────────── v0.1.2 Installed OrdinaryDiffEqHighOrderRK ─────────── v1.5.0 Installed CommonSolve ───────────────────────── v0.2.4 Installed Rmath_jll ─────────────────────────── v0.5.1+0 Installed LightXML ──────────────────────────── v0.9.3 Installed ForwardDiff ───────────────────────── v1.3.0 Installed OrdinaryDiffEq ────────────────────── v6.103.0 Installed SimpleUnPack ──────────────────────── v1.1.0 Installed AliasTables ───────────────────────── v1.1.3 Installed BitTwiddlingConvenienceFunctions ──── v0.1.6 Installed OrdinaryDiffEqStabilizedRK ────────── v1.4.0 Installed LineSearch ────────────────────────── v0.1.4 Installed ConcurrentUtilities ───────────────── v2.5.0 Installed IteratorInterfaceExtensions ───────── v1.0.0 Installed RecipesBase ───────────────────────── v1.3.4 Installed FunctionWrappersWrappers ──────────── v0.1.3 Installed DataAPI ───────────────────────────── v1.16.0 Installed OrdinaryDiffEqBDF ─────────────────── v1.10.1 Installed OrdinaryDiffEqSymplecticRK ────────── v1.7.0 Installed InvertedIndices ───────────────────── v1.3.1 Installed SciMLOperators ────────────────────── v1.13.0 Installed SciMLStructures ───────────────────── v1.7.0 Installed Krylov ────────────────────────────── v0.10.3 Installed StaticArraysCore ──────────────────── v1.4.4 Installed OrdinaryDiffEqLowStorageRK ────────── v1.7.0 Installed SciMLPublic ───────────────────────── v1.0.0 Installed StringManipulation ────────────────── v0.4.2 Installed StaticArrays ──────────────────────── v1.9.15 Installed FastGaussQuadrature ───────────────── v1.1.0 Installed Requires ──────────────────────────── v1.3.1 Installed FunctionWrappers ──────────────────── v1.1.3 Installed OrdinaryDiffEqDifferentiation ─────── v1.16.1 Installed OrdinaryDiffEqNonlinearSolve ──────── v1.15.0 Installed DiffRules ─────────────────────────── v1.15.1 Installed LogExpFunctions ───────────────────── v0.3.29 Installed JSON ──────────────────────────────── v0.21.4 Installed PrettyTables ──────────────────────── v3.1.2 Installed OrdinaryDiffEqCore ────────────────── v1.36.0 Installed Parsers ───────────────────────────── v2.8.3 Installed LightOSM ──────────────────────────── v0.2.11 Installed Distributions ─────────────────────── v0.25.122 Installed SciMLBase ─────────────────────────── v2.127.0 Installed NonlinearSolveFirstOrder ──────────── v1.10.0 Installed OrdinaryDiffEqExplicitRK ──────────── v1.4.0 Installed CSV ───────────────────────────────── v0.10.15 Installed Rmath ─────────────────────────────── v0.9.0 Installed FastClosures ──────────────────────── v0.3.2 Installed FiniteDiff ────────────────────────── v2.29.0 Installed CloseOpenIntervals ────────────────── v0.1.13 Installed StatsFuns ─────────────────────────── v1.5.2 Installed Polyester ─────────────────────────── v0.7.18 Installed OrdinaryDiffEqIMEXMultistep ───────── v1.7.0 Installed WeakRefStrings ────────────────────── v1.4.2 Installed OrdinaryDiffEqFeagin ──────────────── v1.4.0 Installed TestItems ─────────────────────────── v0.1.1 Installed JLLWrappers ───────────────────────── v1.7.1 Installed ArrayTools ────────────────────────── v0.2.7 Installed OrdinaryDiffEqPDIRK ───────────────── v1.6.0 Installed OrdinaryDiffEqSSPRK ───────────────── v1.7.0 Installed OrdinaryDiffEqSDIRK ───────────────── v1.7.0 Installed ThreadingUtilities ────────────────── v0.5.5 Installed Accessors ─────────────────────────── v0.1.42 Installed OrdinaryDiffEqDefault ─────────────── v1.8.0 Installed FilePathsBase ─────────────────────── v0.9.24 Installed DataFrames ────────────────────────── v1.8.1 Installed OrdinaryDiffEqVerner ──────────────── v1.6.0 Installed JLD2 ──────────────────────────────── v0.4.55 Installed Adapt ─────────────────────────────── v4.4.0 Installed ExponentialUtilities ──────────────── v1.28.0 Installed Graphs ────────────────────────────── v1.13.1 Installed ExceptionUnwrapping ───────────────── v0.1.11 Installed ConstructionBase ──────────────────── v1.6.0 Installed RuntimeGeneratedFunctions ─────────── v0.5.16 Installed Compat ────────────────────────────── v4.18.1 Installed HypergeometricFunctions ───────────── v0.3.28 Installed SymbolicIndexingInterface ─────────── v0.3.46 Installed TranscodingStreams ────────────────── v0.11.3 Installed CellListMap ───────────────────────── v0.8.32 Installed StrideArraysCore ──────────────────── v0.5.8 Installed StatsAPI ──────────────────────────── v1.7.1 Installed Statistics ────────────────────────── v1.11.1 Installed TimerOutputs ──────────────────────── v0.5.29 Installed ExproniconLite ────────────────────── v0.10.14 Installed MbedTLS ───────────────────────────── v1.1.9 Installed LazyArrays ────────────────────────── v2.9.3 Installed PrecompileTools ───────────────────── v1.3.3 Installed ProgressMeter ─────────────────────── v1.11.0 Installed OpenSSL ───────────────────────────── v1.6.0 Installed IfElse ────────────────────────────── v0.1.1 Installed CPUSummary ────────────────────────── v0.2.7 Installed MuladdMacro ───────────────────────── v0.2.4 Installed Parameters ────────────────────────── v0.12.3 Installed SciMLLogging ──────────────────────── v1.5.0 Installed StaticGraphs ──────────────────────── v0.3.1 Installed PtrArrays ─────────────────────────── v1.3.0 Installed ChainRulesCore ────────────────────── v1.26.0 Installed XML2_jll ──────────────────────────── v2.15.1+0 Installed MbedTLS_jll ───────────────────────── v2.28.1010+0 Installed Libiconv_jll ──────────────────────── v1.18.0+0 Installed OrdinaryDiffEqTsit5 ───────────────── v1.5.0 Installed SimpleNonlinearSolve ──────────────── v2.9.0 Installed LineSearches ──────────────────────── v7.5.1 Installed Rotations ─────────────────────────── v1.7.1 Installed SpecialFunctions ──────────────────── v2.6.1 Installed PolyesterWeave ────────────────────── v0.2.2 Installed OrdinaryDiffEqFunctionMap ─────────── v1.5.0 Installing 5 artifacts Installed artifact Rmath 121.9 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact Libiconv 1.9 MiB Installed artifact XML2 2.2 MiB Installed artifact MbedTLS 2.2 MiB Updating `~/.julia/environments/v1.14/Project.toml` [d33a0dba] + Bactos v0.0.1 Updating `~/.julia/environments/v1.14/Manifest.toml` [47edcb42] + ADTypes v1.19.0 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.4.0 ⌅ [46ada45e] + Agents v5.17.2 [66dad0bd] + AliasTables v1.1.3 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.22.0 [4c555306] + ArrayLayouts v1.12.2 ⌅ [1dc0ca97] + ArrayTools v0.2.7 [d33a0dba] + Bactos v0.0.1 [d1d4a3ce] + BitFlags v0.1.9 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [70df07ce] + BracketingNonlinearSolve v1.6.0 [2a0fbf3d] + CPUSummary v0.2.7 [336ed68f] + CSV v0.10.15 ⌅ [69e1c6dd] + CellListMap v0.8.32 [d360d2e6] + ChainRulesCore v1.26.0 [fb6a15b2] + CloseOpenIntervals v0.1.13 [944b1d66] + CodecZlib v0.7.8 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [f0e56b4a] + ConcurrentUtilities v2.5.0 [187b0558] + ConstructionBase v1.6.0 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 ⌅ [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [2b5f629d] + DiffEqBase v6.192.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.12 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.122 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.5 [f151be2c] + EnzymeCore v0.8.17 [460bff9d] + ExceptionUnwrapping v0.1.11 [d4d017d3] + ExponentialUtilities v1.28.0 [e2ba6199] + ExprTools v0.1.10 [55351af7] + ExproniconLite v0.10.14 [7034ab61] + FastBroadcast v0.3.5 [9aa1b823] + FastClosures v0.3.2 [442a2c76] + FastGaussQuadrature v1.1.0 [a4df4552] + FastPower v1.2.0 [5789e2e9] + FileIO v1.17.1 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.15.0 [6a86dc24] + FiniteDiff v2.29.0 [26cc04aa] + FiniteDifferences v0.12.33 [f6369f11] + ForwardDiff v1.3.0 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 [46192b85] + GPUArraysCore v0.2.0 [c145ed77] + GenericSchur v0.5.6 [86223c79] + Graphs v1.13.1 [cd3eb016] + HTTP v1.10.19 [34004b35] + HypergeometricFunctions v0.3.28 [615f187c] + IfElse v0.1.1 [d25df0c9] + Inflate v0.1.5 [842dd82b] + InlineStrings v1.4.5 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 ⌅ [033835bb] + JLD2 v0.4.55 [692b3bcd] + JLLWrappers v1.7.1 ⌅ [682c06a0] + JSON v0.21.4 [ae98c720] + Jieko v0.2.1 [ba0b0d4f] + Krylov v0.10.3 [b964fa9f] + LaTeXStrings v1.4.0 [10f19ff3] + LayoutPointers v0.1.17 [5078a376] + LazyArrays v2.9.3 ⌅ [d1922b25] + LightOSM v0.2.11 [9c8b4983] + LightXML v0.9.3 [87fe0de2] + LineSearch v0.1.4 [d3d80556] + LineSearches v7.5.1 [7ed4a6bd] + LinearSolve v3.48.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 [1914dd2f] + MacroTools v0.5.16 [d125e4d3] + ManualMemory v0.1.8 [bb5d69b7] + MaybeInplace v0.1.4 [739be429] + MbedTLS v1.1.9 ⌅ [626554b9] + MetaGraphs v0.7.2 [e1d29d7a] + Missings v1.2.0 [2e0e35c7] + Moshi v0.3.7 [46d2c3a1] + MuladdMacro v0.2.4 [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.3 [b8a86587] + NearestNeighbors v0.4.24 [8913a72c] + NonlinearSolve v4.12.0 [be0214bd] + NonlinearSolveBase v2.4.0 [5959db7a] + NonlinearSolveFirstOrder v1.10.0 [9a2c21bd] + NonlinearSolveQuasiNewton v1.11.0 [26075421] + NonlinearSolveSpectralMethods v1.6.0 [4d8831e6] + OpenSSL v1.6.0 [bac558e1] + OrderedCollections v1.8.1 [1dea7af3] + OrdinaryDiffEq v6.103.0 [89bda076] + OrdinaryDiffEqAdamsBashforthMoulton v1.5.0 [6ad6398a] + OrdinaryDiffEqBDF v1.10.1 [bbf590c4] + OrdinaryDiffEqCore v1.36.0 [50262376] + OrdinaryDiffEqDefault v1.8.0 [4302a76b] + OrdinaryDiffEqDifferentiation v1.16.1 [9286f039] + OrdinaryDiffEqExplicitRK v1.4.0 [e0540318] + OrdinaryDiffEqExponentialRK v1.8.0 [becaefa8] + OrdinaryDiffEqExtrapolation v1.9.0 [5960d6e9] + OrdinaryDiffEqFIRK v1.16.0 [101fe9f7] + OrdinaryDiffEqFeagin v1.4.0 [d3585ca7] + OrdinaryDiffEqFunctionMap v1.5.0 [d28bc4f8] + OrdinaryDiffEqHighOrderRK v1.5.0 [9f002381] + OrdinaryDiffEqIMEXMultistep v1.7.0 [521117fe] + OrdinaryDiffEqLinear v1.6.0 [1344f307] + OrdinaryDiffEqLowOrderRK v1.6.0 [b0944070] + OrdinaryDiffEqLowStorageRK v1.7.0 [127b3ac7] + OrdinaryDiffEqNonlinearSolve v1.15.0 [c9986a66] + OrdinaryDiffEqNordsieck v1.4.0 [5dd0a6cf] + OrdinaryDiffEqPDIRK v1.6.0 [5b33eab2] + OrdinaryDiffEqPRK v1.4.0 [04162be5] + OrdinaryDiffEqQPRK v1.4.0 [af6ede74] + OrdinaryDiffEqRKN v1.5.0 [43230ef6] + OrdinaryDiffEqRosenbrock v1.18.1 [2d112036] + OrdinaryDiffEqSDIRK v1.7.0 [669c94d9] + OrdinaryDiffEqSSPRK v1.7.0 [e3e12d00] + OrdinaryDiffEqStabilizedIRK v1.6.0 [358294b1] + OrdinaryDiffEqStabilizedRK v1.4.0 [fa646aed] + OrdinaryDiffEqSymplecticRK v1.7.0 [b1df2697] + OrdinaryDiffEqTsit5 v1.5.0 [79d7bb75] + OrdinaryDiffEqVerner v1.6.0 [90014a1f] + PDMats v0.11.36 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 [f517fe37] + Polyester v0.7.18 [1d0040c9] + PolyesterWeave v0.2.2 [2dfb63ee] + PooledArrays v1.4.3 [d236fae5] + PreallocationTools v0.4.34 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [08abe8d2] + PrettyTables v3.1.2 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [94ee1d12] + Quaternions v0.7.7 ⌅ [30b38841] + QuickHeaps v0.1.2 [c1ae055f] + RealDot v0.1.0 [3cdcf5f2] + RecipesBase v1.3.4 [731186ca] + RecursiveArrayTools v3.39.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [708f8203] + Richardson v1.4.2 [79098fc4] + Rmath v0.9.0 [6038ab10] + Rotations v1.7.1 [7e49a35a] + RuntimeGeneratedFunctions v0.5.16 [94e857df] + SIMDTypes v0.1.0 [0bca4576] + SciMLBase v2.127.0 [19f34311] + SciMLJacobianOperators v0.1.11 [a6db7da4] + SciMLLogging v1.5.0 [c0aeaf25] + SciMLOperators v1.13.0 [431bcebd] + SciMLPublic v1.0.0 [53ae85a6] + SciMLStructures v1.7.0 [6c6a2e73] + Scratch v1.3.0 [91c51154] + SentinelArrays v1.4.8 [efcf1570] + Setfield v1.1.2 [777ac1f9] + SimpleBufferStream v1.2.0 [727e6d20] + SimpleNonlinearSolve v2.9.0 [699a6c99] + SimpleTraits v0.9.5 [ce78b400] + SimpleUnPack v1.1.0 [47aef6b3] + SimpleWeightedGraphs v1.5.0 [a2af1166] + SortingAlgorithms v1.2.2 [0a514795] + SparseMatrixColorings v0.4.23 [d4ead438] + SpatialIndexing v0.1.6 [276daf66] + SpecialFunctions v2.6.1 [aedffcd0] + Static v1.3.1 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.4 ⌅ [4c8beaf5] + StaticGraphs v0.3.1 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.8 [4c63d2b9] + StatsFuns v1.5.2 [7792a7ef] + StrideArraysCore v0.5.8 [892a3eda] + StringManipulation v0.4.2 [2efcf032] + SymbolicIndexingInterface v0.3.46 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 ⌅ [1c621080] + TestItems v0.1.1 [8290d209] + ThreadingUtilities v0.5.5 [a759f4b9] + TimerOutputs v0.5.29 [3bb67fe8] + TranscodingStreams v0.11.3 [781d530d] + TruncatedStacktraces v1.4.0 [5c2747f8] + URIs v1.6.1 [3a884ed6] + UnPack v1.0.2 [ea10d353] + WeakRefStrings v1.4.2 [76eceee3] + WorkerUtilities v1.6.1 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [856f044c] + MKL_jll v2025.2.0+0 [c8ffd9c3] + MbedTLS_jll v2.28.1010+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [02c8fc9c] + XML2_jll v2.15.1+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.13.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.17.0+0 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.68.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 14.43s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... WARNING: Imported binding Operations.project_rel_path was undeclared at import time during import to TestEnv. 4216.7 ms ✓ TestEnv 1 dependency successfully precompiled in 4 seconds. 27 already precompiled. 1 dependency had output during precompilation: ┌ TestEnv │ WARNING: Imported binding Operations.project_rel_path was undeclared at import time during import to TestEnv. └ ┌ Error: Failed to use TestEnv.jl; test dependencies will not be precompiled │ exception = │ UndefVarError: `project_rel_path` not defined in `TestEnv` │ Suggestion: this global was defined as `Pkg.Operations.project_rel_path` but not assigned a value. │ Stacktrace: │ [1] get_test_dir(ctx::Pkg.Types.Context, pkgspec::PackageSpec) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:75 │ [2] test_dir_has_project_file │ @ ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:52 [inlined] │ [3] maybe_gen_project_override! │ @ ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:83 [inlined] │ [4] activate(pkg::String; allow_reresolve::Bool) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/activate_set.jl:12 │ [5] activate(pkg::String) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/activate_set.jl:9 │ [6] top-level scope │ @ /PkgEval.jl/scripts/precompile.jl:24 │ [7] include(mod::Module, _path::String) │ @ Base ./Base.jl:309 │ [8] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:344 │ [9] _start() │ @ Base ./client.jl:577 └ @ Main /PkgEval.jl/scripts/precompile.jl:26 Precompiling package dependencies... Precompiling packages... 4538.2 ms ✓ MacroTools 1686.5 ms ✓ InlineStrings 777.8 ms ✓ Reexport 1129.7 ms ✓ ConstructionBase 2338.7 ms ✓ IrrationalConstants 814.7 ms ✓ DataValueInterfaces 818.7 ms ✓ StatsAPI 1208.2 ms ✓ Inflate 637.3 ms ✓ CommonSolve 1161.2 ms ✓ TranscodingStreams 811.4 ms ✓ LaTeXStrings 711.0 ms ✓ TestItems 1079.9 ms ✓ Statistics 813.4 ms ✓ Richardson 987.4 ms ✓ StaticArraysCore 1279.9 ms ✓ EnzymeCore 1417.5 ms ✓ IfElse 1248.7 ms ✓ PtrArrays 1076.4 ms ✓ SimpleBufferStream 1312.1 ms ✓ ManualMemory 979.5 ms ✓ DataAPI 844.7 ms ✓ SciMLPublic 3542.5 ms ✓ ExproniconLite 789.4 ms ✓ RealDot 758.0 ms ✓ CommonWorldInvalidations 1159.5 ms ✓ URIs 779.9 ms ✓ FastPower 859.5 ms ✓ InvertedIndices 900.9 ms ✓ InverseFunctions 1233.4 ms ✓ ArrayTools 805.9 ms ✓ CompositionsBase 880.6 ms ✓ BitFlags 768.5 ms ✓ SimpleUnPack 766.4 ms ✓ MuladdMacro 836.3 ms ✓ EnumX 975.0 ms ✓ WorkerUtilities 2119.8 ms ✓ FillArrays 917.7 ms ✓ ExprTools 785.4 ms ✓ UnPack 1830.1 ms ✓ SpatialIndexing 775.7 ms ✓ ConcreteStructs 1193.3 ms ✓ OrderedCollections 3201.6 ms ✓ FunctionWrappers 1026.8 ms ✓ ADTypes 960.3 ms ✓ DocStringExtensions 837.0 ms ✓ FastClosures 730.5 ms ✓ SIMDTypes 782.9 ms ✓ IteratorInterfaceExtensions 1820.8 ms ✓ Crayons 13635.1 ms ✓ Krylov 2435.5 ms ✓ GenericSchur 897.7 ms ✓ NaNMath 1133.8 ms ✓ Requires 1695.4 ms ✓ ConcurrentUtilities 1131.3 ms ✓ SuiteSparse 1743.4 ms ✓ CpuId 843.5 ms ✓ Scratch 2582.0 ms ✓ SentinelArrays 1065.3 ms ✓ LoggingExtras 1726.2 ms ✓ ProgressMeter 1125.7 ms ✓ Compat 1140.3 ms ✓ Preferences 1565.4 ms ✓ ExceptionUnwrapping 1738.6 ms ✓ CommonSubexpressions 3404.2 ms ✓ SimpleTraits 1105.8 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 1048.6 ms ✓ CodecZlib 1394.6 ms ✓ Statistics → SparseArraysExt 1384.6 ms ✓ Distances 804.7 ms ✓ DiffResults 985.8 ms ✓ AliasTables 1690.5 ms ✓ ThreadingUtilities 948.2 ms ✓ Missings 1024.3 ms ✓ PooledArrays 3236.5 ms ✓ Jieko 1164.6 ms ✓ Quaternions 848.5 ms ✓ InverseFunctions → InverseFunctionsDatesExt 1599.5 ms ✓ InverseFunctions → InverseFunctionsTestExt 801.6 ms ✓ CompositionsBase → CompositionsBaseInverseFunctionsExt 3816.9 ms ✓ OpenSSL 1457.0 ms ✓ FillArrays → FillArraysSparseArraysExt 908.3 ms ✓ FillArrays → FillArraysStatisticsExt 3017.4 ms ✓ TimerOutputs 908.4 ms ✓ RuntimeGeneratedFunctions 915.8 ms ✓ Parameters 793.5 ms ✓ FunctionWrappersWrappers 723.7 ms ✓ ADTypes → ADTypesConstructionBaseExt 1854.8 ms ✓ DifferentiationInterface 772.8 ms ✓ ADTypes → ADTypesEnzymeCoreExt 1399.7 ms ✓ LogExpFunctions 736.8 ms ✓ TableTraits 902.4 ms ✓ Adapt 8435.5 ms ✓ FileIO 1778.2 ms ✓ PDMats 827.4 ms ✓ Compat → CompatLinearAlgebraExt 948.7 ms ✓ PrecompileTools 1339.8 ms ✓ JLLWrappers 1563.0 ms ✓ TruncatedStacktraces 1509.6 ms ✓ SciMLLogging 2920.4 ms ✓ Setfield 1260.2 ms ✓ Distances → DistancesSparseArraysExt 16292.6 ms ✓ Moshi 4984.8 ms ✓ Accessors 1260.3 ms ✓ DifferentiationInterface → DifferentiationInterfaceSparseArraysExt 800.3 ms ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt 1715.0 ms ✓ Tables 1145.8 ms ✓ ArrayInterface 1299.5 ms ✓ Adapt → AdaptSparseArraysExt 1145.8 ms ✓ GPUArraysCore 766.1 ms ✓ EnzymeCore → AdaptExt 1390.1 ms ✓ FillArrays → FillArraysPDMatsExt 2678.6 ms ✓ ChainRulesCore 1958.7 ms ✓ FilePathsBase 3746.8 ms ✓ DataStructures 3331.3 ms ✓ StringManipulation 12098.8 ms ✓ StaticArrays 2664.7 ms ✓ RecipesBase 15391.4 ms ✓ Parsers 4849.4 ms ✓ Static 11148.2 ms ✓ SparseMatrixColorings 42804.1 ms ✓ JLD2 1413.9 ms ✓ Rmath_jll 1389.5 ms ✓ OpenSpecFun_jll 5075.3 ms ✓ IntelOpenMP_jll 5028.6 ms ✓ oneTBB_jll 1407.8 ms ✓ Libiconv_jll 1372.2 ms ✓ MbedTLS_jll 1730.2 ms ✓ Accessors → TestExt 2459.9 ms ✓ Accessors → LinearAlgebraExt 778.6 ms ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 2147.0 ms ✓ MaybeInplace 1260.2 ms ✓ ArrayInterface → ArrayInterfaceSparseArraysExt 825.1 ms ✓ SciMLStructures 1718.1 ms ✓ PreallocationTools 800.8 ms ✓ DifferentiationInterface → DifferentiationInterfaceGPUArraysCoreExt 799.8 ms ✓ ArrayInterface → ArrayInterfaceGPUArraysCoreExt 1296.5 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 809.5 ms ✓ ADTypes → ADTypesChainRulesCoreExt 914.8 ms ✓ Distances → DistancesChainRulesCoreExt 884.8 ms ✓ DifferentiationInterface → DifferentiationInterfaceChainRulesCoreExt 3018.1 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 818.9 ms ✓ ArrayInterface → ArrayInterfaceChainRulesCoreExt 2733.9 ms ✓ FilePathsBase → FilePathsBaseTestExt 928.5 ms ✓ FilePathsBase → FilePathsBaseMmapExt 1551.3 ms ✓ SortingAlgorithms 2834.2 ms ✓ QuadGK 1856.8 ms ✓ QuickHeaps 38265.2 ms ✓ PrettyTables 3527.3 ms ✓ ArnoldiMethod 1314.0 ms ✓ StaticArrays → StaticArraysStatisticsExt 1491.7 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 1440.5 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 21957.0 ms ✓ ArrayLayouts 4691.0 ms ✓ Rotations 1343.5 ms ✓ DifferentiationInterface → DifferentiationInterfaceStaticArraysExt 1302.8 ms ✓ Adapt → AdaptStaticArraysExt 1430.0 ms ✓ Accessors → StaticArraysExt 3704.5 ms ✓ JSON 905.0 ms ✓ InlineStrings → ParsersExt 881.6 ms ✓ BitTwiddlingConvenienceFunctions 2216.4 ms ✓ CPUSummary 3647.1 ms ✓ StaticArrayInterface 1762.7 ms ✓ DifferentiationInterface → DifferentiationInterfaceSparseMatrixColoringsExt 1450.1 ms ✓ Rmath 4840.0 ms ✓ SpecialFunctions  Downloading artifact: IntelOpenMP  Downloading artifact: oneTBB 10053.0 ms ✓ MKL_jll 1532.6 ms ✓ XML2_jll 1988.3 ms ✓ MbedTLS 4831.7 ms ✓ SciMLOperators 1285.0 ms ✓ FiniteDiff 3484.8 ms ✓ SymbolicIndexingInterface 1282.1 ms ✓ MaybeInplace → MaybeInplaceSparseArraysExt 40806.1 ms ✓ ExponentialUtilities 5059.8 ms ✓ StatsBase 84765.9 ms ✓ DataFrames 4808.3 ms ✓ NearestNeighbors 9918.2 ms ✓ Graphs 2831.6 ms ✓ FiniteDifferences ERROR: LoadError: cannot declare CellListMap.copy_output exported; it is already declared public Stacktrace:  [1] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:310  [2] top-level scope  @ ~/.julia/packages/CellListMap/6MkUi/src/CellListMap.jl:49  [3] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [4] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3157  [5] top-level scope  @ stdin:5  [6] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [7] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3003  [8] include_string  @ ./loading.jl:3013 [inlined]  [9] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [10] _start()  @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/CellListMap/6MkUi/src/ParticleSystem.jl:5 in expression starting at /home/pkgeval/.julia/packages/CellListMap/6MkUi/src/CellListMap.jl:1 in expression starting at stdin:5 1 dependency had output during precompilation: ┌ MKL_jll │ Downloading artifact: IntelOpenMP │ Downloading artifact: oneTBB └ Precompilation completed after 617.2s ################################################################################ # Testing # Testing Bactos Status `/tmp/jl_mbeVdW/Project.toml` ⌅ [46ada45e] Agents v5.17.2 [d33a0dba] Bactos v0.0.1 ⌅ [69e1c6dd] CellListMap v0.8.32 [31c24e10] Distributions v0.25.122 [26cc04aa] FiniteDifferences v0.12.33 [1dea7af3] OrdinaryDiffEq v6.103.0 [6038ab10] Rotations v1.7.1 [90137ffa] StaticArrays v1.9.15 [37e2e46d] LinearAlgebra v1.13.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_mbeVdW/Manifest.toml` [47edcb42] ADTypes v1.19.0 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.4.0 ⌅ [46ada45e] Agents v5.17.2 [66dad0bd] AliasTables v1.1.3 [ec485272] ArnoldiMethod v0.4.0 [4fba245c] ArrayInterface v7.22.0 [4c555306] ArrayLayouts v1.12.2 ⌅ [1dc0ca97] ArrayTools v0.2.7 [d33a0dba] Bactos v0.0.1 [d1d4a3ce] BitFlags v0.1.9 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [70df07ce] BracketingNonlinearSolve v1.6.0 [2a0fbf3d] CPUSummary v0.2.7 [336ed68f] CSV v0.10.15 ⌅ [69e1c6dd] CellListMap v0.8.32 [d360d2e6] ChainRulesCore v1.26.0 [fb6a15b2] CloseOpenIntervals v0.1.13 [944b1d66] CodecZlib v0.7.8 [38540f10] CommonSolve v0.2.4 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.3 [f0e56b4a] ConcurrentUtilities v2.5.0 [187b0558] ConstructionBase v1.6.0 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [2b5f629d] DiffEqBase v6.192.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.12 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.122 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.5 [f151be2c] EnzymeCore v0.8.17 [460bff9d] ExceptionUnwrapping v0.1.11 [d4d017d3] ExponentialUtilities v1.28.0 [e2ba6199] ExprTools v0.1.10 [55351af7] ExproniconLite v0.10.14 [7034ab61] FastBroadcast v0.3.5 [9aa1b823] FastClosures v0.3.2 [442a2c76] FastGaussQuadrature v1.1.0 [a4df4552] FastPower v1.2.0 [5789e2e9] FileIO v1.17.1 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.15.0 [6a86dc24] FiniteDiff v2.29.0 [26cc04aa] FiniteDifferences v0.12.33 [f6369f11] ForwardDiff v1.3.0 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v0.1.3 [46192b85] GPUArraysCore v0.2.0 [c145ed77] GenericSchur v0.5.6 [86223c79] Graphs v1.13.1 [cd3eb016] HTTP v1.10.19 [34004b35] HypergeometricFunctions v0.3.28 [615f187c] IfElse v0.1.1 [d25df0c9] Inflate v0.1.5 [842dd82b] InlineStrings v1.4.5 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 ⌅ [033835bb] JLD2 v0.4.55 [692b3bcd] JLLWrappers v1.7.1 ⌅ [682c06a0] JSON v0.21.4 [ae98c720] Jieko v0.2.1 [ba0b0d4f] Krylov v0.10.3 [b964fa9f] LaTeXStrings v1.4.0 [10f19ff3] LayoutPointers v0.1.17 [5078a376] LazyArrays v2.9.3 ⌅ [d1922b25] LightOSM v0.2.11 [9c8b4983] LightXML v0.9.3 [87fe0de2] LineSearch v0.1.4 [d3d80556] LineSearches v7.5.1 [7ed4a6bd] LinearSolve v3.48.0 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.2.0 [1914dd2f] MacroTools v0.5.16 [d125e4d3] ManualMemory v0.1.8 [bb5d69b7] MaybeInplace v0.1.4 [739be429] MbedTLS v1.1.9 ⌅ [626554b9] MetaGraphs v0.7.2 [e1d29d7a] Missings v1.2.0 [2e0e35c7] Moshi v0.3.7 [46d2c3a1] MuladdMacro v0.2.4 [d41bc354] NLSolversBase v7.10.0 [77ba4419] NaNMath v1.1.3 [b8a86587] NearestNeighbors v0.4.24 [8913a72c] NonlinearSolve v4.12.0 [be0214bd] NonlinearSolveBase v2.4.0 [5959db7a] NonlinearSolveFirstOrder v1.10.0 [9a2c21bd] NonlinearSolveQuasiNewton v1.11.0 [26075421] NonlinearSolveSpectralMethods v1.6.0 [4d8831e6] OpenSSL v1.6.0 [bac558e1] OrderedCollections v1.8.1 [1dea7af3] OrdinaryDiffEq v6.103.0 [89bda076] OrdinaryDiffEqAdamsBashforthMoulton v1.5.0 [6ad6398a] OrdinaryDiffEqBDF v1.10.1 [bbf590c4] OrdinaryDiffEqCore v1.36.0 [50262376] OrdinaryDiffEqDefault v1.8.0 [4302a76b] OrdinaryDiffEqDifferentiation v1.16.1 [9286f039] OrdinaryDiffEqExplicitRK v1.4.0 [e0540318] OrdinaryDiffEqExponentialRK v1.8.0 [becaefa8] OrdinaryDiffEqExtrapolation v1.9.0 [5960d6e9] OrdinaryDiffEqFIRK v1.16.0 [101fe9f7] OrdinaryDiffEqFeagin v1.4.0 [d3585ca7] OrdinaryDiffEqFunctionMap v1.5.0 [d28bc4f8] OrdinaryDiffEqHighOrderRK v1.5.0 [9f002381] OrdinaryDiffEqIMEXMultistep v1.7.0 [521117fe] OrdinaryDiffEqLinear v1.6.0 [1344f307] OrdinaryDiffEqLowOrderRK v1.6.0 [b0944070] OrdinaryDiffEqLowStorageRK v1.7.0 [127b3ac7] OrdinaryDiffEqNonlinearSolve v1.15.0 [c9986a66] OrdinaryDiffEqNordsieck v1.4.0 [5dd0a6cf] OrdinaryDiffEqPDIRK v1.6.0 [5b33eab2] OrdinaryDiffEqPRK v1.4.0 [04162be5] OrdinaryDiffEqQPRK v1.4.0 [af6ede74] OrdinaryDiffEqRKN v1.5.0 [43230ef6] OrdinaryDiffEqRosenbrock v1.18.1 [2d112036] OrdinaryDiffEqSDIRK v1.7.0 [669c94d9] OrdinaryDiffEqSSPRK v1.7.0 [e3e12d00] OrdinaryDiffEqStabilizedIRK v1.6.0 [358294b1] OrdinaryDiffEqStabilizedRK v1.4.0 [fa646aed] OrdinaryDiffEqSymplecticRK v1.7.0 [b1df2697] OrdinaryDiffEqTsit5 v1.5.0 [79d7bb75] OrdinaryDiffEqVerner v1.6.0 [90014a1f] PDMats v0.11.36 [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.3 [f517fe37] Polyester v0.7.18 [1d0040c9] PolyesterWeave v0.2.2 [2dfb63ee] PooledArrays v1.4.3 [d236fae5] PreallocationTools v0.4.34 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 [08abe8d2] PrettyTables v3.1.2 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [94ee1d12] Quaternions v0.7.7 ⌅ [30b38841] QuickHeaps v0.1.2 [c1ae055f] RealDot v0.1.0 [3cdcf5f2] RecipesBase v1.3.4 [731186ca] RecursiveArrayTools v3.39.0 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [708f8203] Richardson v1.4.2 [79098fc4] Rmath v0.9.0 [6038ab10] Rotations v1.7.1 [7e49a35a] RuntimeGeneratedFunctions v0.5.16 [94e857df] SIMDTypes v0.1.0 [0bca4576] SciMLBase v2.127.0 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libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.68.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... ERROR: LoadError: cannot declare CellListMap.copy_output exported; it is already declared public Stacktrace:  [1] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:310  [2] top-level scope  @ ~/.julia/packages/CellListMap/6MkUi/src/CellListMap.jl:49  [3] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [4] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3157  [5] top-level scope  @ stdin:5  [6] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [7] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3003  [8] include_string  @ ./loading.jl:3013 [inlined]  [9] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [10] _start()  @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/CellListMap/6MkUi/src/ParticleSystem.jl:5 in expression starting at /home/pkgeval/.julia/packages/CellListMap/6MkUi/src/CellListMap.jl:1 in expression starting at stdin:5 WARNING: Detected access to binding `Models.Bird` in a world prior to its definition world.  Julia 1.12 has introduced more strict world age semantics for global bindings.  !!! This code may malfunction under Revise.  !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `Models.SchellingAgent` in a world prior to its definition world.  Julia 1.12 has introduced more strict world age semantics for global bindings.  !!! This code may malfunction under Revise.  !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `Models.PoorSoul` in a world prior to its definition world.  Julia 1.12 has introduced more strict world age semantics for global bindings.  !!! This code may malfunction under Revise.  !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. WARNING: Detected access to binding `Models.Zombie` in a world prior to its definition world.  Julia 1.12 has introduced more strict world age semantics for global bindings.  !!! This code may malfunction under Revise.  !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. 1 dependency had output during precompilation: ┌ Agents │ [Output was shown above] └ Update message: Agents v5.15 Welcome to this new update of Agents.jl! Noteworthy changes: - Agents.jl moved to Julia 1.9+, and now exports visualization and interactive applications automatically once Makie (or Makie backends such as GLMakie) come into scope, using the new package extension system. The only downside of this is that now to visualize ABMs on open street maps, the package OSMMakie.jl must be explicitly loaded as well. InteractiveDynamics.jl is now obsolete. - Several performance improvements all across the board. - DEI-motivated name change for all names that remove agents: - `genocide! -> remove_all!` - `kill_agent! -> remove_agent!` - `UnkillableABM -> UnremovableABM` - We have created an objective fully automated framework for comparing open source agent based modelling software. It shows that Agents.jl is much faster than competing alternatives (MASON, NetLogo, Mesa). See the online documentation for more! ERROR: LoadError: cannot declare CellListMap.copy_output exported; it is already declared public Stacktrace:  [1] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:310  [2] top-level scope  @ ~/.julia/packages/CellListMap/6MkUi/src/CellListMap.jl:49  [3] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [4] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3157  [5] top-level scope  @ stdin:5  [6] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [7] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:3003  [8] include_string  @ ./loading.jl:3013 [inlined]  [9] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [10] _start()  @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/CellListMap/6MkUi/src/ParticleSystem.jl:5 in expression starting at /home/pkgeval/.julia/packages/CellListMap/6MkUi/src/CellListMap.jl:1 in expression starting at stdin:5 1 dependency had output during precompilation: ┌ CellListMap │ [Output was shown above] └ ERROR: LoadError: The following 1 package failed to precompile: CellListMap Failed to precompile CellListMap [69e1c6dd-3888-40e6-b3c8-31ac5f578864] to "/home/pkgeval/.julia/compiled/v1.14/CellListMap/jl_GEzfnR" (ProcessExited(1)). in expression starting at /home/pkgeval/.julia/packages/Bactos/tHnWL/src/Bactos.jl:1 in expression starting at /home/pkgeval/.julia/packages/Bactos/tHnWL/test/runtests.jl:1 Testing failed after 231.25s ERROR: LoadError: Package Bactos errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2946 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2795 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:572 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:548 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [12] include(mod::Module, _path::String) @ Base ./Base.jl:309 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 901.67s: package fails to precompile