Package evaluation to test PEtab on Julia 1.14.0-DEV.1272 (5444ac0564*) started at 2025-11-21T03:07:21.297 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 5.34s ################################################################################ # Installation # Installing PEtab... Resolving package versions... Installed MKL_jll ────────────────────────── v2025.2.0+0 Installed CommonWorldInvalidations ───────── v1.0.0 Installed FastPower ──────────────────────── v1.2.0 Installed Glob ───────────────────────────── v1.3.1 Installed InlineStrings ──────────────────── v1.4.5 Installed SymbolicUtils ──────────────────── v3.32.0 Installed Optim ──────────────────────────── v1.13.2 Installed SIMDTypes ──────────────────────── v0.1.0 Installed OrderedCollections ─────────────── v1.8.1 Installed Sundials ───────────────────────── v4.28.0 Installed Functors ───────────────────────── v0.5.2 Installed PreallocationTools ─────────────── v0.4.34 Installed EnzymeCore ─────────────────────── v0.8.17 Installed NonlinearSolveSpectralMethods ──── v1.6.0 Installed CpuId ──────────────────────────── v0.3.1 Installed SentinelArrays ─────────────────── v1.4.8 Installed DispatchDoctor ─────────────────── v0.4.26 Installed StaticArrayInterface ───────────── v1.8.0 Installed NaNMath ────────────────────────── v1.1.3 Installed OrdinaryDiffEqRosenbrock ───────── v1.18.1 Installed QuadGK ─────────────────────────── v2.11.2 Installed DynamicQuantities ──────────────── v1.10.0 Installed OpenSpecFun_jll ────────────────── v0.5.6+0 Installed FastBroadcast ──────────────────── v0.3.5 Installed NonlinearSolveBase ─────────────── v2.4.0 Installed DiffEqCallbacks ────────────────── v4.10.1 Installed Sobol ──────────────────────────── v1.5.0 Installed SBML_jll ───────────────────────── v5.20.1+0 Installed SCCNonlinearSolve ──────────────── v1.6.0 Installed JumpProcesses ──────────────────── v9.19.1 Installed LinearSolve ────────────────────── v3.47.0 Installed Tables ─────────────────────────── v1.12.1 Installed EnumX ──────────────────────────── v1.0.5 Installed SBMLImporter ───────────────────── v3.1.0 Installed NLSolversBase ──────────────────── v7.10.0 Installed BracketingNonlinearSolve ───────── v1.6.0 Installed JuliaFormatter ─────────────────── v2.2.0 Installed DiffEqBase ─────────────────────── v6.191.0 Installed Jieko ──────────────────────────── v0.2.1 Installed InverseFunctions ───────────────── v0.1.17 Installed Reexport ───────────────────────── v1.2.2 Installed Missings ───────────────────────── v1.2.0 Installed Preferences ────────────────────── v1.5.0 Installed Static ─────────────────────────── v1.3.1 Installed TableTraits ────────────────────── v1.0.1 Installed MaybeInplace ───────────────────── v0.1.4 Installed NonlinearSolve ─────────────────── v4.12.0 Installed LaTeXStrings ───────────────────── v1.4.0 Installed SortingAlgorithms ──────────────── v1.2.2 Installed Crayons ────────────────────────── v4.1.1 Installed Format ─────────────────────────── v1.3.7 Installed UnPack ─────────────────────────── v1.0.2 Installed RecursiveArrayTools ────────────── v3.39.0 Installed MLStyle ────────────────────────── v0.4.17 Installed Catalyst ───────────────────────── v15.0.8 Installed ADTypes ────────────────────────── v1.19.0 Installed Inflate ────────────────────────── v0.1.5 Installed DiffResults ────────────────────── v1.1.0 Installed TermInterface ──────────────────── v2.0.0 Installed URIs ───────────────────────────── v1.6.1 Installed MacroTools ─────────────────────── v0.5.16 Installed DataStructures ─────────────────── v0.18.22 Installed ManualMemory ───────────────────── v0.1.8 Installed oneTBB_jll ─────────────────────── v2022.0.0+1 Installed Tricks ─────────────────────────── v0.1.13 Installed FillArrays ─────────────────────── v1.15.0 Installed AbstractTrees ──────────────────── v0.4.5 Installed DelimitedFiles ─────────────────── v1.9.1 Installed ArnoldiMethod ──────────────────── v0.4.0 Installed SparseMatrixColorings ──────────── v0.4.23 Installed StatsBase ──────────────────────── v0.34.8 Installed CodecZlib ──────────────────────── v0.7.8 Installed IntelOpenMP_jll ────────────────── v2025.2.0+0 Installed SciMLJacobianOperators ─────────── v0.1.11 Installed DataValueInterfaces ────────────── v1.0.0 Installed CEnum ──────────────────────────── v0.5.0 Installed ExprTools ──────────────────────── v0.1.10 Installed ArrayInterface ─────────────────── v7.22.0 Installed CommonSubexpressions ───────────── v0.3.1 Installed RandomNumbers ──────────────────── v1.6.0 Installed LoggingExtras ──────────────────── v1.2.0 Installed IrrationalConstants ────────────── v0.2.6 Installed IntegerMathUtils ───────────────── v0.1.3 Installed LayoutPointers ─────────────────── v0.1.17 Installed GPUArraysCore ──────────────────── v0.2.0 Installed ConcreteStructs ────────────────── v0.2.3 Installed TruncatedStacktraces ───────────── v1.4.0 Installed ArrayLayouts ───────────────────── v1.12.1 Installed SimpleTraits ───────────────────── v0.9.5 Installed PooledArrays ───────────────────── v1.4.3 Installed NonlinearSolveQuasiNewton ──────── v1.11.0 Installed CompositeTypes ─────────────────── v0.1.4 Installed WorkerUtilities ────────────────── v1.6.1 Installed Setfield ───────────────────────── v1.1.2 Installed PDMats ─────────────────────────── v0.11.36 Installed BlockArrays ────────────────────── v1.9.3 Installed Moshi ──────────────────────────── v0.3.7 Installed DocStringExtensions ────────────── v0.9.5 Installed ResettableStacks ───────────────── v1.1.1 Installed FindFirstFunctions ─────────────── v1.4.2 Installed CompositionsBase ───────────────── v0.1.2 Installed CommonSolve ────────────────────── v0.2.4 Installed ForwardDiff ────────────────────── v0.10.39 Installed DifferentiationInterface ───────── v0.7.12 Installed Rmath_jll ──────────────────────── v0.5.1+0 Installed Sundials_jll ───────────────────── v5.2.3+0 Installed SimpleUnPack ───────────────────── v1.1.0 Installed Ghostscript_jll ────────────────── v9.55.1+0 Installed Bijections ─────────────────────── v0.2.2 Installed Unityper ───────────────────────── v0.1.6 Installed ComponentArrays ────────────────── v0.15.30 Installed AliasTables ────────────────────── v1.1.3 Installed BitTwiddlingConvenienceFunctions ─ v0.1.6 Installed Combinatorics ──────────────────── v1.0.2 Installed DynamicPolynomials ─────────────── v0.6.3 Installed LineSearch ─────────────────────── v0.1.4 Installed IteratorInterfaceExtensions ────── v1.0.0 Installed FunctionWrappersWrappers ───────── v0.1.3 Installed RecipesBase ────────────────────── v1.3.4 Installed Krylov ─────────────────────────── v0.10.2 Installed DomainSets ─────────────────────── v0.7.16 Installed DataAPI ────────────────────────── v1.16.0 Installed InvertedIndices ────────────────── v1.3.1 Installed SciMLOperators ─────────────────── v1.12.0 Installed SciMLStructures ────────────────── v1.7.0 Installed TaskLocalValues ────────────────── v0.1.3 Installed StaticArraysCore ───────────────── v1.4.4 Installed ReverseDiff ────────────────────── v1.16.1 Installed StaticArrays ───────────────────── v1.9.15 Installed MultivariatePolynomials ────────── v0.5.9 Installed OrdinaryDiffEqBDF ──────────────── v1.10.1 Installed StringManipulation ─────────────── v0.4.1 Installed SciMLPublic ────────────────────── v1.0.0 Installed OrdinaryDiffEqDifferentiation ──── v1.16.1 Installed FunctionWrappers ───────────────── v1.1.3 Installed Requires ───────────────────────── v1.3.1 Installed Latexify ───────────────────────── v0.16.10 Installed Symbolics ──────────────────────── v6.57.0 Installed OrdinaryDiffEqNonlinearSolve ───── v1.15.0 Installed LogExpFunctions ────────────────── v0.3.29 Installed DiffRules ──────────────────────── v1.15.1 Installed Parsers ────────────────────────── v2.8.3 Installed OrdinaryDiffEqCore ─────────────── v1.36.0 Installed CSV ────────────────────────────── v0.10.15 Installed NonlinearSolveFirstOrder ───────── v1.10.0 Installed JuliaSyntax ────────────────────── v0.4.10 Installed SciMLBase ──────────────────────── v2.127.0 Installed PrettyTables ───────────────────── v3.1.1 Installed Distributions ──────────────────── v0.25.122 Installed Rmath ──────────────────────────── v0.9.0 Installed FastClosures ───────────────────── v0.3.2 Installed CloseOpenIntervals ─────────────── v0.1.13 Installed StatsFuns ──────────────────────── v1.5.2 Installed FiniteDiff ─────────────────────── v2.29.0 Installed Polyester ──────────────────────── v0.7.18 Installed Unitful ────────────────────────── v1.25.1 Installed WeakRefStrings ─────────────────── v1.4.2 Installed TestItems ──────────────────────── v1.0.0 Installed JLLWrappers ────────────────────── v1.7.1 Installed QuasiMonteCarlo ────────────────── v0.3.3 Installed MutableArithmetics ─────────────── v1.6.7 Installed SymbolicLimits ─────────────────── v0.2.3 Installed DataFrames ─────────────────────── v1.8.1 Installed Graphs ─────────────────────────── v1.13.1 Installed OrdinaryDiffEqSDIRK ────────────── v1.7.0 Installed Primes ─────────────────────────── v0.5.7 Installed JpegTurbo_jll ──────────────────── v3.1.3+0 Installed ThreadingUtilities ─────────────── v0.5.5 Installed Accessors ──────────────────────── v0.1.42 Installed FilePathsBase ──────────────────── v0.9.24 Installed Adapt ──────────────────────────── v4.4.0 Installed HypergeometricFunctions ────────── v0.3.28 Installed LatticeRules ───────────────────── v0.0.1 Installed RuntimeGeneratedFunctions ──────── v0.5.16 Installed ConstructionBase ───────────────── v1.6.0 Installed SBML ───────────────────────────── v1.6.0 Installed PoissonRandom ──────────────────── v0.4.7 Installed Compat ─────────────────────────── v4.18.1 Installed Random123 ──────────────────────── v1.7.1 Installed SymbolicIndexingInterface ──────── v0.3.46 Installed TranscodingStreams ─────────────── v0.11.3 Installed ModelingToolkit ────────────────── v9.84.0 Installed StrideArraysCore ───────────────── v0.5.8 Installed PositiveFactorizations ─────────── v0.2.4 Installed StatsAPI ───────────────────────── v1.7.1 Installed Statistics ─────────────────────── v1.11.1 Installed LazyArrays ─────────────────────── v2.9.1 Installed ExproniconLite ─────────────────── v0.10.14 Installed PrecompileTools ────────────────── v1.3.3 Installed StringEncodings ────────────────── v0.3.7 Installed TimerOutputs ───────────────────── v0.5.29 Installed CPUSummary ─────────────────────── v0.2.7 Installed YAML ───────────────────────────── v0.4.16 Installed Parameters ─────────────────────── v0.12.3 Installed OffsetArrays ───────────────────── v1.17.0 Installed ChainRulesCore ─────────────────── v1.26.0 Installed ReactionNetworkImporters ───────── v0.16.1 Installed IfElse ─────────────────────────── v0.1.1 Installed MuladdMacro ────────────────────── v0.2.4 Installed PtrArrays ──────────────────────── v1.3.0 Installed XML2_jll ───────────────────────── v2.13.9+0 Installed SciMLLogging ───────────────────── v1.5.0 Installed DiffEqNoiseProcess ─────────────── v5.24.1 Installed SpecialFunctions ───────────────── v2.6.1 Installed IntervalSets ───────────────────── v0.7.13 Installed SimpleNonlinearSolve ───────────── v2.9.0 Installed Libiconv_jll ───────────────────── v1.18.0+0 Installed PolyesterWeave ─────────────────── v0.2.2 Installed LineSearches ───────────────────── v7.4.1 Installed CommonMark ─────────────────────── v0.9.1 Installed PEtab ──────────────────────────── v3.11.0 Installing 8 artifacts Installed artifact Rmath 121.9 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact JpegTurbo 1.4 MiB Installed artifact Libiconv 1.9 MiB Installed artifact Sundials 2.1 MiB Installed artifact XML2 2.5 MiB Installed artifact SBML 5.8 MiB Installed artifact Ghostscript 31.4 MiB Updating `~/.julia/environments/v1.14/Project.toml` [48d54b35] + PEtab v3.11.0 Updating `~/.julia/environments/v1.14/Manifest.toml` [47edcb42] + ADTypes v1.19.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.22.0 [4c555306] + ArrayLayouts v1.12.1 [e2ed5e7c] + Bijections v0.2.2 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [8e7c35d0] + BlockArrays v1.9.3 [70df07ce] + BracketingNonlinearSolve v1.6.0 [fa961155] + CEnum v0.5.0 [2a0fbf3d] + CPUSummary v0.2.7 [336ed68f] + CSV v0.10.15 [479239e8] + Catalyst v15.0.8 [d360d2e6] + ChainRulesCore v1.26.0 [fb6a15b2] + CloseOpenIntervals v0.1.13 [944b1d66] + CodecZlib v0.7.8 ⌅ [861a8166] + Combinatorics v1.0.2 [a80b9123] + CommonMark v0.9.1 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [b0b7db55] + ComponentArrays v0.15.30 [b152e2b5] + CompositeTypes v0.1.4 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [187b0558] + ConstructionBase v1.6.0 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 ⌅ [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [2b5f629d] + DiffEqBase v6.191.0 [459566f4] + DiffEqCallbacks v4.10.1 [77a26b50] + DiffEqNoiseProcess v5.24.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.12 [8d63f2c5] + DispatchDoctor v0.4.26 [31c24e10] + Distributions v0.25.122 [ffbed154] + DocStringExtensions v0.9.5 [5b8099bc] + DomainSets v0.7.16 ⌃ [7c1d4256] + DynamicPolynomials v0.6.3 [06fc5a27] + DynamicQuantities v1.10.0 [4e289a0a] + EnumX v1.0.5 [f151be2c] + EnzymeCore v0.8.17 [e2ba6199] + ExprTools v0.1.10 [55351af7] + ExproniconLite v0.10.14 [7034ab61] + FastBroadcast v0.3.5 [9aa1b823] + FastClosures v0.3.2 [a4df4552] + FastPower v1.2.0 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.15.0 [64ca27bc] + FindFirstFunctions v1.4.2 [6a86dc24] + FiniteDiff v2.29.0 [1fa38f19] + Format v1.3.7 ⌅ [f6369f11] + ForwardDiff v0.10.39 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 [d9f16b24] + Functors v0.5.2 [46192b85] + GPUArraysCore v0.2.0 [c27321d9] + Glob v1.3.1 [86223c79] + Graphs v1.13.1 [34004b35] + HypergeometricFunctions v0.3.28 [615f187c] + IfElse v0.1.1 [d25df0c9] + Inflate v0.1.5 [842dd82b] + InlineStrings v1.4.5 [18e54dd8] + IntegerMathUtils v0.1.3 [8197267c] + IntervalSets v0.7.13 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [ae98c720] + Jieko v0.2.1 [98e50ef6] + JuliaFormatter v2.2.0 ⌅ [70703baa] + JuliaSyntax v0.4.10 [ccbc3e58] + JumpProcesses v9.19.1 [ba0b0d4f] + Krylov v0.10.2 [b964fa9f] + LaTeXStrings v1.4.0 [23fbe1c1] + Latexify v0.16.10 [73f95e8e] + LatticeRules v0.0.1 [10f19ff3] + LayoutPointers v0.1.17 [5078a376] + LazyArrays v2.9.1 [87fe0de2] + LineSearch v0.1.4 [d3d80556] + LineSearches v7.4.1 [7ed4a6bd] + LinearSolve v3.47.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 [d8e11817] + MLStyle v0.4.17 [1914dd2f] + MacroTools v0.5.16 [d125e4d3] + ManualMemory v0.1.8 [bb5d69b7] + MaybeInplace v0.1.4 [e1d29d7a] + Missings v1.2.0 ⌅ [961ee093] + ModelingToolkit v9.84.0 [2e0e35c7] + Moshi v0.3.7 [46d2c3a1] + MuladdMacro v0.2.4 ⌃ [102ac46a] + MultivariatePolynomials v0.5.9 [d8a4904e] + MutableArithmetics v1.6.7 [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.3 [8913a72c] + NonlinearSolve v4.12.0 [be0214bd] + NonlinearSolveBase v2.4.0 [5959db7a] + NonlinearSolveFirstOrder v1.10.0 [9a2c21bd] + NonlinearSolveQuasiNewton v1.11.0 [26075421] + NonlinearSolveSpectralMethods v1.6.0 [6fe1bfb0] + OffsetArrays v1.17.0 [429524aa] + Optim v1.13.2 [bac558e1] + OrderedCollections v1.8.1 [6ad6398a] + OrdinaryDiffEqBDF v1.10.1 [bbf590c4] + OrdinaryDiffEqCore v1.36.0 [4302a76b] + OrdinaryDiffEqDifferentiation v1.16.1 [127b3ac7] + OrdinaryDiffEqNonlinearSolve v1.15.0 [43230ef6] + OrdinaryDiffEqRosenbrock v1.18.1 [2d112036] + OrdinaryDiffEqSDIRK v1.7.0 [90014a1f] + PDMats v0.11.36 [48d54b35] + PEtab v3.11.0 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 [e409e4f3] + PoissonRandom v0.4.7 [f517fe37] + Polyester v0.7.18 [1d0040c9] + PolyesterWeave v0.2.2 [2dfb63ee] + PooledArrays v1.4.3 [85a6dd25] + PositiveFactorizations v0.2.4 [d236fae5] + PreallocationTools v0.4.34 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [08abe8d2] + PrettyTables v3.1.1 [27ebfcd6] + Primes v0.5.7 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [8a4e6c94] + QuasiMonteCarlo v0.3.3 [74087812] + Random123 v1.7.1 [e6cf234a] + RandomNumbers v1.6.0 [b4db0fb7] + ReactionNetworkImporters v0.16.1 [3cdcf5f2] + RecipesBase v1.3.4 [731186ca] + RecursiveArrayTools v3.39.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [ae5879a3] + ResettableStacks v1.1.1 [37e2e3b7] + ReverseDiff v1.16.1 [79098fc4] + Rmath v0.9.0 [7e49a35a] + RuntimeGeneratedFunctions v0.5.16 [e5567a89] + SBML v1.6.0 [210efffb] + SBMLImporter v3.1.0 [9dfe8606] + SCCNonlinearSolve v1.6.0 [94e857df] + SIMDTypes v0.1.0 [0bca4576] + SciMLBase v2.127.0 [19f34311] + SciMLJacobianOperators v0.1.11 [a6db7da4] + SciMLLogging v1.5.0 [c0aeaf25] + SciMLOperators v1.12.0 [431bcebd] + SciMLPublic v1.0.0 [53ae85a6] + SciMLStructures v1.7.0 [91c51154] + SentinelArrays v1.4.8 [efcf1570] + Setfield v1.1.2 [727e6d20] + SimpleNonlinearSolve v2.9.0 [699a6c99] + SimpleTraits v0.9.5 [ce78b400] + SimpleUnPack v1.1.0 [ed01d8cd] + Sobol v1.5.0 [a2af1166] + SortingAlgorithms v1.2.2 [0a514795] + SparseMatrixColorings v0.4.23 [276daf66] + SpecialFunctions v2.6.1 [aedffcd0] + Static v1.3.1 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.8 [4c63d2b9] + StatsFuns v1.5.2 [7792a7ef] + StrideArraysCore v0.5.8 [69024149] + StringEncodings v0.3.7 [892a3eda] + StringManipulation v0.4.1 ⌅ [c3572dad] + Sundials v4.28.0 [2efcf032] + SymbolicIndexingInterface v0.3.46 ⌃ [19f23fe9] + SymbolicLimits v0.2.3 ⌅ [d1185830] + SymbolicUtils v3.32.0 ⌅ [0c5d862f] + Symbolics v6.57.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [ed4db957] + TaskLocalValues v0.1.3 [8ea1fca8] + TermInterface v2.0.0 [1c621080] + TestItems v1.0.0 [8290d209] + ThreadingUtilities v0.5.5 [a759f4b9] + TimerOutputs v0.5.29 [3bb67fe8] + TranscodingStreams v0.11.3 [410a4b4d] + Tricks v0.1.13 [781d530d] + TruncatedStacktraces v1.4.0 [5c2747f8] + URIs v1.6.1 [3a884ed6] + UnPack v1.0.2 [1986cc42] + Unitful v1.25.1 [a7c27f48] + Unityper v0.1.6 [ea10d353] + WeakRefStrings v1.4.2 [76eceee3] + WorkerUtilities v1.6.1 [ddb6d928] + YAML v0.4.16 [61579ee1] + Ghostscript_jll v9.55.1+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [aacddb02] + JpegTurbo_jll v3.1.3+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [856f044c] + MKL_jll v2025.2.0+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [bb12108a] + SBML_jll v5.20.1+0 ⌅ [fb77eaff] + Sundials_jll v5.2.3+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.16.0+0 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.68.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 11.08s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... WARNING: Imported binding Operations.project_rel_path was undeclared at import time during import to TestEnv. 1923.8 ms ✓ TestEnv 1 dependency successfully precompiled in 2 seconds. 27 already precompiled. 1 dependency had output during precompilation: ┌ TestEnv │ WARNING: Imported binding Operations.project_rel_path was undeclared at import time during import to TestEnv. └ ┌ Error: Failed to use TestEnv.jl; test dependencies will not be precompiled │ exception = │ UndefVarError: `project_rel_path` not defined in `TestEnv` │ Suggestion: this global was defined as `Pkg.Operations.project_rel_path` but not assigned a value. │ Stacktrace: │ [1] get_test_dir(ctx::Pkg.Types.Context, pkgspec::PackageSpec) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:75 │ [2] test_dir_has_project_file │ @ ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:52 [inlined] │ [3] maybe_gen_project_override! │ @ ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:83 [inlined] │ [4] activate(pkg::String; allow_reresolve::Bool) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/activate_set.jl:12 │ [5] activate(pkg::String) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/activate_set.jl:9 │ [6] top-level scope │ @ /PkgEval.jl/scripts/precompile.jl:24 │ [7] include(mod::Module, _path::String) │ @ Base ./Base.jl:309 │ [8] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:344 │ [9] _start() │ @ Base ./client.jl:577 └ @ Main /PkgEval.jl/scripts/precompile.jl:26 Precompiling package dependencies... Precompiling packages... 2319.4 ms ✓ MacroTools 928.0 ms ✓ InlineStrings 442.9 ms ✓ Reexport 625.2 ms ✓ ConstructionBase 1159.6 ms ✓ IrrationalConstants 449.7 ms ✓ DataValueInterfaces 478.9 ms ✓ StatsAPI 1240.7 ms ✓ Format 589.3 ms ✓ IntervalSets 478.0 ms ✓ CEnum 1117.0 ms ✓ Combinatorics 12662.5 ms ✓ JuliaSyntax 561.5 ms ✓ Inflate 469.6 ms ✓ TermInterface 443.0 ms ✓ CommonSolve 711.7 ms ✓ TranscodingStreams 476.0 ms ✓ LaTeXStrings 499.9 ms ✓ Glob 429.2 ms ✓ TestItems 634.8 ms ✓ Statistics 523.7 ms ✓ Tricks 545.2 ms ✓ StaticArraysCore 748.6 ms ✓ EnzymeCore 519.1 ms ✓ CompositeTypes 445.6 ms ✓ IfElse 458.6 ms ✓ PtrArrays 451.8 ms ✓ TaskLocalValues 523.3 ms ✓ ManualMemory 544.5 ms ✓ PositiveFactorizations 486.4 ms ✓ DataAPI 499.7 ms ✓ SciMLPublic 2092.8 ms ✓ ExproniconLite 449.0 ms ✓ CommonWorldInvalidations 496.3 ms ✓ FindFirstFunctions 682.8 ms ✓ URIs 448.3 ms ✓ FastPower 13098.9 ms ✓ MLStyle 492.9 ms ✓ InvertedIndices 911.7 ms ✓ RandomNumbers 526.0 ms ✓ InverseFunctions 464.7 ms ✓ CompositionsBase 641.7 ms ✓ AbstractTrees 470.9 ms ✓ SimpleUnPack 465.2 ms ✓ MuladdMacro 487.8 ms ✓ EnumX 564.5 ms ✓ WorkerUtilities 543.5 ms ✓ Bijections 1200.6 ms ✓ FillArrays 505.0 ms ✓ ExprTools 457.2 ms ✓ IntegerMathUtils 451.0 ms ✓ UnPack 460.7 ms ✓ ConcreteStructs 722.4 ms ✓ OrderedCollections 827.2 ms ✓ FunctionWrappers 767.9 ms ✓ ADTypes 572.5 ms ✓ LatticeRules 621.5 ms ✓ DocStringExtensions 473.0 ms ✓ FastClosures 923.5 ms ✓ OffsetArrays 433.4 ms ✓ SIMDTypes 425.1 ms ✓ IteratorInterfaceExtensions 996.6 ms ✓ Crayons 576.7 ms ✓ DelimitedFiles 7754.1 ms ✓ Krylov 569.0 ms ✓ NaNMath 650.7 ms ✓ Requires 708.8 ms ✓ SuiteSparse 943.1 ms ✓ CpuId 17283.3 ms ✓ Unitful 1475.4 ms ✓ SentinelArrays 617.0 ms ✓ LoggingExtras 661.0 ms ✓ Compat 644.7 ms ✓ Preferences 6005.3 ms ✓ MutableArithmetics 948.7 ms ✓ CommonSubexpressions 1749.2 ms ✓ SimpleTraits 456.9 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 432.7 ms ✓ IntervalSets → IntervalSetsRandomExt 433.8 ms ✓ ConstructionBase → ConstructionBaseIntervalSetsExt 535.7 ms ✓ CodecZlib 740.5 ms ✓ Statistics → SparseArraysExt 432.7 ms ✓ IntervalSets → IntervalSetsStatisticsExt 493.2 ms ✓ DiffResults 548.0 ms ✓ AliasTables 954.5 ms ✓ ThreadingUtilities 544.7 ms ✓ Missings 580.5 ms ✓ PooledArrays 1694.6 ms ✓ Jieko 1038.3 ms ✓ Random123 482.1 ms ✓ InverseFunctions → InverseFunctionsDatesExt 841.1 ms ✓ InverseFunctions → InverseFunctionsTestExt 453.6 ms ✓ CompositionsBase → CompositionsBaseInverseFunctionsExt 856.8 ms ✓ FillArrays → FillArraysSparseArraysExt 562.0 ms ✓ FillArrays → FillArraysStatisticsExt 1660.8 ms ✓ TimerOutputs 506.5 ms ✓ RuntimeGeneratedFunctions 647.9 ms ✓ Primes 541.0 ms ✓ Parameters 440.2 ms ✓ FunctionWrappersWrappers 433.2 ms ✓ ADTypes → ADTypesConstructionBaseExt 1063.1 ms ✓ DifferentiationInterface 431.7 ms ✓ ADTypes → ADTypesEnzymeCoreExt 772.7 ms ✓ LogExpFunctions 430.8 ms ✓ TableTraits 1261.9 ms ✓ Sobol 534.4 ms ✓ Adapt 1036.3 ms ✓ PDMats 883.7 ms ✓ Unitful → ConstructionBaseUnitfulExt 967.5 ms ✓ Unitful → PrintfExt 893.8 ms ✓ Unitful → InverseFunctionsUnitfulExt 470.7 ms ✓ Compat → CompatLinearAlgebraExt 508.7 ms ✓ PrecompileTools 671.6 ms ✓ JLLWrappers 2119.1 ms ✓ DispatchDoctor 828.2 ms ✓ TruncatedStacktraces 728.2 ms ✓ SciMLLogging 696.7 ms ✓ Unityper 1554.3 ms ✓ Setfield 8725.6 ms ✓ Moshi 2604.1 ms ✓ Accessors 753.4 ms ✓ DifferentiationInterface → DifferentiationInterfaceSparseArraysExt 462.4 ms ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt 560.9 ms ✓ PoissonRandom 1001.5 ms ✓ Tables 649.3 ms ✓ ArrayInterface 715.4 ms ✓ Adapt → AdaptSparseArraysExt 653.1 ms ✓ GPUArraysCore 431.2 ms ✓ EnzymeCore → AdaptExt 465.5 ms ✓ OffsetArrays → OffsetArraysAdaptExt 821.7 ms ✓ FillArrays → FillArraysPDMatsExt 1432.8 ms ✓ ChainRulesCore 1151.8 ms ✓ FilePathsBase 2121.8 ms ✓ DataStructures 714.8 ms ✓ Functors 1617.4 ms ✓ StringManipulation 6993.5 ms ✓ StaticArrays 6846.2 ms ✓ CommonMark 1472.6 ms ✓ RecipesBase 8695.1 ms ✓ Parsers 2739.7 ms ✓ Static 6102.8 ms ✓ SparseMatrixColorings 773.4 ms ✓ Rmath_jll 781.0 ms ✓ OpenSpecFun_jll 2121.4 ms ✓ IntelOpenMP_jll 829.9 ms ✓ Sundials_jll 2124.6 ms ✓ oneTBB_jll 777.9 ms ✓ Libiconv_jll 795.9 ms ✓ JpegTurbo_jll 517.6 ms ✓ DispatchDoctor → DispatchDoctorEnzymeCoreExt 4809.5 ms ✓ DynamicQuantities 872.0 ms ✓ Accessors → TestExt 1318.4 ms ✓ Accessors → IntervalSetsExt 1271.1 ms ✓ Accessors → LinearAlgebraExt 952.1 ms ✓ Accessors → UnitfulExt 435.7 ms ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 1133.1 ms ✓ MaybeInplace 723.6 ms ✓ ArrayInterface → ArrayInterfaceSparseArraysExt 476.1 ms ✓ SciMLStructures 935.9 ms ✓ PreallocationTools 461.5 ms ✓ DifferentiationInterface → DifferentiationInterfaceGPUArraysCoreExt 453.9 ms ✓ ArrayInterface → ArrayInterfaceGPUArraysCoreExt 752.4 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 492.2 ms ✓ ADTypes → ADTypesChainRulesCoreExt 498.9 ms ✓ DifferentiationInterface → DifferentiationInterfaceChainRulesCoreExt 1594.0 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 818.8 ms ✓ DispatchDoctor → DispatchDoctorChainRulesCoreExt 468.3 ms ✓ ArrayInterface → ArrayInterfaceChainRulesCoreExt 1402.4 ms ✓ FilePathsBase → FilePathsBaseTestExt 539.3 ms ✓ FilePathsBase → FilePathsBaseMmapExt 828.4 ms ✓ SortingAlgorithms 1466.6 ms ✓ QuadGK 19301.3 ms ✓ PrettyTables 2105.8 ms ✓ ArnoldiMethod 756.2 ms ✓ ResettableStacks 787.8 ms ✓ StaticArrays → StaticArraysStatisticsExt 795.7 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 780.8 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 2785.5 ms ✓ DomainSets 13538.5 ms ✓ ArrayLayouts 782.2 ms ✓ DifferentiationInterface → DifferentiationInterfaceStaticArraysExt 758.0 ms ✓ Adapt → AdaptStaticArraysExt 830.9 ms ✓ Accessors → StaticArraysExt 32876.5 ms ✓ JuliaFormatter 722.2 ms ✓ IntervalSets → IntervalSetsRecipesBaseExt 533.9 ms ✓ InlineStrings → ParsersExt 527.3 ms ✓ BitTwiddlingConvenienceFunctions 1165.4 ms ✓ CPUSummary 2059.6 ms ✓ StaticArrayInterface 988.1 ms ✓ DifferentiationInterface → DifferentiationInterfaceSparseMatrixColoringsExt 831.4 ms ✓ Rmath 2680.8 ms ✓ SpecialFunctions  Downloading artifact: IntelOpenMP  Downloading artifact: oneTBB 5421.5 ms ✓ MKL_jll 606.4 ms ✓ StringEncodings 792.7 ms ✓ XML2_jll 835.2 ms ✓ Ghostscript_jll 1023.8 ms ✓ DynamicQuantities → DynamicQuantitiesLinearAlgebraExt 1827.4 ms ✓ DynamicQuantities → DynamicQuantitiesUnitfulExt 2625.9 ms ✓ SciMLOperators 757.3 ms ✓ FiniteDiff 1928.4 ms ✓ SymbolicIndexingInterface 738.7 ms ✓ MaybeInplace → MaybeInplaceSparseArraysExt 3752.1 ms ✓ MultivariatePolynomials 2723.8 ms ✓ StatsBase 45186.2 ms ✓ DataFrames 5295.8 ms ✓ Graphs 816.0 ms ✓ DomainSets → DomainSetsRandomExt 1895.7 ms ✓ ArrayLayouts → ArrayLayoutsSparseArraysExt 2768.5 ms ✓ BlockArrays 1346.6 ms ✓ WeakRefStrings 887.4 ms ✓ PolyesterWeave 577.7 ms ✓ StaticArrayInterface → StaticArrayInterfaceOffsetArraysExt 856.8 ms ✓ StaticArrayInterface → StaticArrayInterfaceStaticArraysExt 1115.2 ms ✓ ComponentArrays 604.8 ms ✓ CloseOpenIntervals 719.5 ms ✓ LayoutPointers 2095.5 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 1351.5 ms ✓ HypergeometricFunctions 725.2 ms ✓ DiffRules 1405.5 ms ✓ YAML 787.4 ms ✓ SBML_jll 3286.3 ms ✓ Latexify 568.2 ms ✓ SciMLOperators → SciMLOperatorsStaticArraysCoreExt 885.2 ms ✓ SciMLOperators → SciMLOperatorsSparseArraysExt 766.0 ms ✓ FiniteDiff → FiniteDiffStaticArraysExt 736.6 ms ✓ FiniteDiff → FiniteDiffSparseArraysExt 564.4 ms ✓ DifferentiationInterface → DifferentiationInterfaceFiniteDiffExt 1534.2 ms ✓ SymbolicIndexingInterface → SymbolicIndexingInterfacePrettyTablesExt 2013.3 ms ✓ RecursiveArrayTools 2450.5 ms ✓ DynamicPolynomials 1020.0 ms ✓ PDMats → StatsBaseExt 3409.2 ms ✓ QuasiMonteCarlo 3931.5 ms ✓ LazyArrays 1650.2 ms ✓ BlockArrays → BlockArraysAdaptExt 14894.6 ms ✓ CSV 1094.6 ms ✓ StrideArraysCore 1508.8 ms ✓ StatsFuns 4099.7 ms ✓ ForwardDiff 8755.9 ms ✓ SBML 1237.5 ms ✓ Latexify → SparseArraysExt 3306.7 ms ✓ Latexify → DataFramesExt 1914.9 ms ✓ Unitful → LatexifyExt 954.5 ms ✓ RecursiveArrayTools → RecursiveArrayToolsSparseArraysExt 668.9 ms ✓ RecursiveArrayTools → RecursiveArrayToolsTablesExt 13216.0 ms ✓ SciMLBase 823.2 ms ✓ ComponentArrays → ComponentArraysRecursiveArrayToolsExt 27939.1 ms ✓ SymbolicUtils 2013.2 ms ✓ LazyArrays → LazyArraysStaticArraysExt 2308.9 ms ✓ LazyArrays → LazyArraysBlockArraysExt 1013.5 ms ✓ Polyester 1755.3 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 561.9 ms ✓ StatsFuns → StatsFunsInverseFunctionsExt 5355.5 ms ✓ Distributions 1335.3 ms ✓ ForwardDiff → ForwardDiffStaticArraysExt 1011.7 ms ✓ FastPower → FastPowerForwardDiffExt 1266.9 ms ✓ Unitful → ForwardDiffExt 1187.8 ms ✓ DifferentiationInterface → DifferentiationInterfaceForwardDiffExt 759.9 ms ✓ PreallocationTools → PreallocationToolsForwardDiffExt 854.4 ms ✓ RecursiveArrayTools → RecursiveArrayToolsForwardDiffExt 1418.9 ms ✓ SciMLBase → SciMLBaseChainRulesCoreExt 2111.2 ms ✓ SciMLBase → SciMLBaseForwardDiffExt 1368.5 ms ✓ SciMLBase → SciMLBaseDifferentiationInterfaceExt 1701.2 ms ✓ SciMLBase → SciMLBaseMLStyleExt 1433.3 ms ✓ SCCNonlinearSolve 1535.8 ms ✓ ComponentArrays → ComponentArraysSciMLBaseExt 3987.0 ms ✓ SymbolicLimits 1030.5 ms ✓ FastBroadcast 1828.4 ms ✓ Distributions → DistributionsTestExt 1839.5 ms ✓ Distributions → DistributionsChainRulesCoreExt 1640.5 ms ✓ QuasiMonteCarlo → QuasiMonteCarloDistributionsExt 2034.3 ms ✓ SciMLBase → SciMLBaseDistributionsExt 22845.7 ms ✓ ReverseDiff 1702.2 ms ✓ NLSolversBase 10436.0 ms ✓ LinearSolve 3882.4 ms ✓ SciMLJacobianOperators 1001.3 ms ✓ RecursiveArrayTools → RecursiveArrayToolsFastBroadcastExt 30465.8 ms ✓ Symbolics 5401.7 ms ✓ FastPower → FastPowerReverseDiffExt 5685.4 ms ✓ DifferentiationInterface → DifferentiationInterfaceReverseDiffExt 5404.8 ms ✓ ArrayInterface → ArrayInterfaceReverseDiffExt 5430.6 ms ✓ PreallocationTools → PreallocationToolsReverseDiffExt 5852.9 ms ✓ ComponentArrays → ComponentArraysReverseDiffExt 6254.7 ms ✓ SciMLBase → SciMLBaseReverseDiffExt 7584.8 ms ✓ SymbolicUtils → SymbolicUtilsReverseDiffExt 3580.2 ms ✓ LineSearches 3139.7 ms ✓ LinearSolve → LinearSolveEnzymeExt 5359.0 ms ✓ LinearSolve → LinearSolveSparseArraysExt 4808.8 ms ✓ LinearSolve → LinearSolveForwardDiffExt 5296.7 ms ✓ LineSearch 8490.5 ms ✓ NonlinearSolveBase 3337.4 ms ✓ DiffEqBase 5371.1 ms ✓ Symbolics → SymbolicsForwardDiffExt 4956.3 ms ✓ DifferentiationInterface → DifferentiationInterfaceSymbolicsExt 5535.6 ms ✓ Optim 1649.9 ms ✓ LineSearch → LineSearchLineSearchesExt 1792.3 ms ✓ NonlinearSolveBase → NonlinearSolveBaseSparseMatrixColoringsExt 1777.1 ms ✓ NonlinearSolveBase → NonlinearSolveBaseSparseArraysExt 1438.1 ms ✓ NonlinearSolveBase → NonlinearSolveBaseChainRulesCoreExt 3146.4 ms ✓ NonlinearSolveBase → NonlinearSolveBaseLinearSolveExt 1403.9 ms ✓ NonlinearSolveBase → NonlinearSolveBaseLineSearchExt 2182.1 ms ✓ NonlinearSolveBase → NonlinearSolveBaseForwardDiffExt 7979.3 ms ✓ NonlinearSolveBase → NonlinearSolveBaseReverseDiffExt 4152.6 ms ✓ BracketingNonlinearSolve 1849.5 ms ✓ DiffEqBase → DiffEqBaseSparseArraysExt 2104.7 ms ✓ DiffEqBase → DiffEqBaseUnitfulExt 1817.9 ms ✓ DiffEqBase → DiffEqBaseChainRulesCoreExt 2060.3 ms ✓ DiffEqBase → DiffEqBaseForwardDiffExt 8293.2 ms ✓ DiffEqBase → DiffEqBaseReverseDiffExt 4697.8 ms ✓ DiffEqCallbacks 5098.2 ms ✓ OrdinaryDiffEqCore 5030.8 ms ✓ Symbolics → SymbolicsPreallocationToolsExt 15698.2 ms ✓ NonlinearSolveQuasiNewton 8902.3 ms ✓ NonlinearSolveSpectralMethods 26090.6 ms ✓ NonlinearSolveFirstOrder 1688.3 ms ✓ BracketingNonlinearSolve → BracketingNonlinearSolveForwardDiffExt 11544.4 ms ✓ Sundials 4250.5 ms ✓ DiffEqNoiseProcess 1617.3 ms ✓ DiffEqCallbacks → DiffEqCallbacksFunctorsExt 4191.2 ms ✓ JumpProcesses 1729.9 ms ✓ OrdinaryDiffEqCore → OrdinaryDiffEqCoreEnzymeCoreExt 3799.9 ms ✓ NonlinearSolveQuasiNewton → NonlinearSolveQuasiNewtonForwardDiffExt 1895.8 ms ✓ NonlinearSolveSpectralMethods → NonlinearSolveSpectralMethodsForwardDiffExt 1670.9 ms ✓ BracketingNonlinearSolve → BracketingNonlinearSolveChainRulesCoreExt 11350.9 ms ✓ SimpleNonlinearSolve 7700.7 ms ✓ DiffEqNoiseProcess → DiffEqNoiseProcessReverseDiffExt 7749.4 ms ✓ OrdinaryDiffEqDifferentiation 8453.3 ms ✓ SimpleNonlinearSolve → SimpleNonlinearSolveReverseDiffExt 1814.3 ms ✓ SimpleNonlinearSolve → SimpleNonlinearSolveChainRulesCoreExt 3771.8 ms ✓ OrdinaryDiffEqDifferentiation → OrdinaryDiffEqDifferentiationSparseArraysExt 18719.2 ms ✓ NonlinearSolve 23110.7 ms ✓ OrdinaryDiffEqRosenbrock 5625.8 ms ✓ NonlinearSolve → NonlinearSolveSundialsExt 8267.2 ms ✓ OrdinaryDiffEqNonlinearSolve 154455.9 ms ✓ ModelingToolkit 8103.9 ms ✓ OrdinaryDiffEqSDIRK 32550.6 ms ✓ Catalyst 16234.9 ms ✓ OrdinaryDiffEqBDF 22861.8 ms ✓ ReactionNetworkImporters 43484.0 ms ✓ SBMLImporter 22711.2 ms ✓ SBMLImporter → SBMLImporterForwardDiffExt 158781.4 ms ✓ PEtab 46100.2 ms ✓ PEtab → PEtabOptimExtension 341 dependencies successfully precompiled in 1452 seconds. 40 already precompiled. 1 dependency had output during precompilation: ┌ MKL_jll │ Downloading artifact: IntelOpenMP │ Downloading artifact: oneTBB └ Precompilation completed after 1460.27s ################################################################################ # Testing # Testing PEtab Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function. Installed Bzip2_jll ─────────────────────────── v1.0.9+0 Installed Libuuid_jll ───────────────────────── v2.41.2+0 Installed Qt6Base_jll ───────────────────────── v6.8.2+2 Installed DefineSingletons ──────────────────── v0.1.2 Installed HarfBuzz_jll ──────────────────────── v8.5.1+0 Installed libaom_jll ────────────────────────── v3.13.1+0 Installed libass_jll ────────────────────────── v0.17.4+0 Installed GPUCompiler ───────────────────────── v1.7.4 Installed Cairo_jll ─────────────────────────── v1.18.5+0 Installed Xorg_libXinerama_jll ──────────────── v1.1.6+0 Installed Graphite2_jll ─────────────────────── v1.3.15+0 Installed Libtiff_jll ───────────────────────── v4.7.2+0 Installed PlotThemes ────────────────────────── v3.3.0 Installed libinput_jll ──────────────────────── v1.28.1+0 Installed Xorg_libpciaccess_jll ─────────────── v0.18.1+0 Installed OrdinaryDiffEqExponentialRK ───────── v1.8.0 Installed OrdinaryDiffEqFIRK ────────────────── v1.16.0 Installed ArgCheck ──────────────────────────── v2.5.0 Installed InitialValues ─────────────────────── v0.3.1 Installed MUMPS_seq_jll ─────────────────────── v500.800.100+0 Installed Fontconfig_jll ────────────────────── v2.17.1+0 Installed fzf_jll ───────────────────────────── v0.61.1+0 Installed PyCall ────────────────────────────── v1.96.4 Installed OrdinaryDiffEqQPRK ────────────────── v1.4.0 Installed AdaptiveMCMC ──────────────────────── v0.1.4 Installed ChainRules ────────────────────────── v1.72.6 Installed Ipopt_jll ─────────────────────────── v300.1400.1900+0 Installed Opus_jll ──────────────────────────── v1.5.2+0 Installed Ogg_jll ───────────────────────────── v1.3.6+0 Installed WoodburyMatrices ──────────────────── v1.0.0 Installed StructIO ──────────────────────────── v0.3.1 Installed ScopedValues ──────────────────────── v1.5.0 Installed FiniteDifferences ─────────────────── v0.12.33 Installed Xorg_libxcb_jll ───────────────────── v1.17.1+0 Installed Xorg_xcb_util_wm_jll ──────────────── v0.4.2+0 Installed LZO_jll ───────────────────────────── v2.10.3+0 Installed LERC_jll ──────────────────────────── v4.0.1+0 Installed OrdinaryDiffEqLowOrderRK ──────────── v1.6.0 Installed FFMPEG ────────────────────────────── v0.4.5 Installed Unzip ─────────────────────────────── v0.2.0 Installed NonlinearSolveBase ────────────────── v2.2.0 Installed LLVMOpenMP_jll ────────────────────── v18.1.8+0 Installed OrdinaryDiffEqNordsieck ───────────── v1.4.0 Installed OrdinaryDiffEqAdamsBashforthMoulton ─ v1.5.0 Installed Xorg_libICE_jll ───────────────────── v1.1.2+0 Installed eudev_jll ─────────────────────────── v3.2.14+0 Installed MCMCChains ────────────────────────── v7.6.0 Installed Aqua ──────────────────────────────── v0.8.14 Installed Grisu ─────────────────────────────── v1.0.2 Installed RangeArrays ───────────────────────── v0.3.2 Installed EpollShim_jll ─────────────────────── v0.0.20230411+1 Installed NaturalSort ───────────────────────── v1.0.0 Installed Xorg_xcb_util_jll ─────────────────── v0.4.1+0 Installed OrdinaryDiffEqLinear ──────────────── v1.6.0 Installed GenericSchur ──────────────────────── v0.5.6 Installed UnicodeFun ────────────────────────── v0.4.1 Installed MappedArrays ──────────────────────── v0.4.2 Installed Optimisers ────────────────────────── v0.4.6 Installed x264_jll ──────────────────────────── v10164.0.1+0 Installed Xorg_libXau_jll ───────────────────── v1.0.13+0 Installed Xorg_libXfixes_jll ────────────────── v6.0.2+0 Installed Qt6ShaderTools_jll ────────────────── v6.8.2+1 Installed mtdev_jll ─────────────────────────── v1.1.7+0 Installed MCMCDiagnosticTools ───────────────── v0.3.15 Installed Libffi_jll ────────────────────────── v3.4.7+0 Installed Pixman_jll ────────────────────────── v0.44.2+0 Installed SparseConnectivityTracer ──────────── v1.1.3 Installed ConsoleProgressMonitor ────────────── v0.1.2 Installed Richardson ────────────────────────── v1.4.2 Installed Zygote ────────────────────────────── v0.7.10 Installed Expat_jll ─────────────────────────── v2.7.3+0 Installed RealDot ───────────────────────────── v0.1.0 Installed StructUtils ───────────────────────── v2.6.0 Installed libdecor_jll ──────────────────────── v0.2.2+0 Installed libpng_jll ────────────────────────── v1.6.50+0 Installed Xorg_libXcursor_jll ───────────────── v1.2.4+0 Installed Contour ───────────────────────────── v0.6.3 Installed HTTP ──────────────────────────────── v1.10.19 Installed StableRNGs ────────────────────────── v1.0.4 Installed ColorVectorSpace ──────────────────── v0.11.0 Installed Roots ─────────────────────────────── v2.2.10 Installed ObjectFile ────────────────────────── v0.5.0 Installed TerminalLoggers ───────────────────── v0.1.7 Installed Interpolations ────────────────────── v0.16.2 Installed Xorg_xcb_util_keysyms_jll ─────────── v0.4.1+0 Installed BitFlags ──────────────────────────── v0.1.9 Installed L_BFGS_B_jll ──────────────────────── v3.0.1+0 Installed LeftChildRightSiblingTrees ────────── v0.2.1 Installed libfdk_aac_jll ────────────────────── v2.0.4+0 Installed OrdinaryDiffEqRKN ─────────────────── v1.5.0 Installed Hwloc_jll ─────────────────────────── v2.12.2+0 Installed OrdinaryDiffEqStabilizedIRK ───────── v1.6.0 Installed OrdinaryDiffEqExtrapolation ───────── v1.9.0 Installed SplittablesBase ───────────────────── v0.1.15 Installed Transducers ───────────────────────── v0.4.85 Installed Scratch ───────────────────────────── v1.3.0 Installed Baselet ───────────────────────────── v0.1.1 Installed FFMPEG_jll ────────────────────────── v8.0.0+0 Installed OrdinaryDiffEqPRK ─────────────────── v1.4.0 Installed SimpleBufferStream ────────────────── v1.2.0 Installed SPRAL_jll ─────────────────────────── v2025.5.20+0 Installed OptimizationBase ──────────────────── v2.11.0 Installed OrdinaryDiffEq ────────────────────── v6.103.0 Installed Qt6Declarative_jll ────────────────── v6.8.2+1 Installed OrdinaryDiffEqHighOrderRK ─────────── v1.5.0 Installed VersionParsing ────────────────────── v1.3.0 Installed LBFGSB ────────────────────────────── v0.4.1 Installed AxisArrays ────────────────────────── v0.4.8 Installed Plots ─────────────────────────────── v1.41.1 Installed RelocatableFolders ────────────────── v1.0.1 Installed JLFzf ─────────────────────────────── v0.1.11 Installed KernelDensity ─────────────────────── v0.6.10 Installed ConcurrentUtilities ───────────────── v2.5.0 Installed OrdinaryDiffEqStabilizedRK ────────── v1.4.0 Installed LibTracyClient_jll ────────────────── v0.9.1+6 Installed Xorg_libXi_jll ────────────────────── v1.8.3+0 Installed libevdev_jll ──────────────────────── v1.13.4+0 Installed SparseInverseSubset ───────────────── v0.1.2 Installed NNlib ─────────────────────────────── v0.9.31 Installed HashArrayMappedTries ──────────────── v0.2.0 Installed OrdinaryDiffEqSymplecticRK ────────── v1.7.0 Installed ColorSchemes ──────────────────────── v3.31.0 Installed SciMLSensitivity ──────────────────── v7.90.0 Installed Conda ─────────────────────────────── v1.10.3 Installed Colors ────────────────────────────── v0.13.1 Installed Wayland_jll ───────────────────────── v1.24.0+0 Installed Measures ──────────────────────────── v0.3.3 Installed OrdinaryDiffEqLowStorageRK ────────── v1.7.0 Installed Xorg_libxkbfile_jll ───────────────── v1.1.3+0 Installed FastGaussQuadrature ───────────────── v1.1.0 Installed BangBang ──────────────────────────── v0.4.6 Installed AbstractFFTs ──────────────────────── v1.5.0 Installed Libglvnd_jll ──────────────────────── v1.7.1+1 Installed AxisAlgorithms ────────────────────── v1.1.0 Installed Glib_jll ──────────────────────────── v2.86.0+0 Installed Xorg_xkbcomp_jll ──────────────────── v1.4.7+0 Installed LogDensityProblemsAD ──────────────── v1.13.1 Installed ColorTypes ────────────────────────── v0.12.1 Installed LLVM ──────────────────────────────── v9.4.4 Installed Enzyme_jll ────────────────────────── v0.0.216+0 Installed OpenBLAS32_jll ────────────────────── v0.3.29+0 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─────────────────────────── v1.10.0 Installed SafeTestsets ──────────────────────── v0.1.0 Installed IRTools ───────────────────────────── v0.4.15 Installed OrdinaryDiffEqSSPRK ───────────────── v1.7.0 Installed Bijectors ─────────────────────────── v0.15.12 Installed OrdinaryDiffEqPDIRK ───────────────── v1.6.0 Installed RecipesPipeline ───────────────────── v0.6.12 Installed Xorg_xtrans_jll ───────────────────── v1.6.0+0 Installed StatisticalTraits ─────────────────── v3.5.0 Installed MicroCollections ──────────────────── v0.2.0 Installed GR_jll ────────────────────────────── v0.73.19+1 Installed ZygoteRules ───────────────────────── v0.2.7 Installed OrdinaryDiffEqDefault ─────────────── v1.8.0 Installed Dbus_jll ──────────────────────────── v1.16.2+0 Installed Libmount_jll ──────────────────────── v2.41.2+0 Installed Xorg_libX11_jll ───────────────────── v1.8.12+0 Installed OrdinaryDiffEqVerner ──────────────── v1.6.0 Installed ExponentialUtilities ──────────────── v1.28.0 Installed ExceptionUnwrapping ───────────────── v0.1.11 Installed LLVMExtra_jll ─────────────────────── v0.0.38+0 Installed Optimization ──────────────────────── v4.8.0 Installed PlotUtils ─────────────────────────── v1.4.4 Installed ProgressLogging ───────────────────── v0.1.5 Installed TensorCore ────────────────────────── v0.1.1 Installed ProgressMeter ─────────────────────── v1.11.0 Installed OpenSSL ───────────────────────────── v1.6.0 Installed MbedTLS ───────────────────────────── v1.1.9 Installed Cassette ──────────────────────────── v0.3.14 Installed StructArrays ──────────────────────── v0.7.2 Installed Xorg_xcb_util_image_jll ───────────── v0.4.1+0 Installed Atomix ────────────────────────────── v1.1.2 Installed LogDensityProblems ────────────────── v2.2.0 Installed xkbcommon_jll ─────────────────────── v1.9.2+0 Installed ASL_jll ───────────────────────────── v0.1.3+0 Installed GettextRuntime_jll ────────────────── v0.22.4+0 Installed Tracker ───────────────────────────── v0.2.38 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───────────────────────── v2.28.10+0 Installed Xorg_libXext_jll ──────────────────── v1.3.7+0 Installed OrdinaryDiffEqTsit5 ───────────────── v1.5.0 Installed Qt6Wayland_jll ────────────────────── v6.8.2+2 Installed Xorg_libXrandr_jll ────────────────── v1.5.5+0 Installed ChangesOfVariables ────────────────── v0.1.10 Installed OrdinaryDiffEqFunctionMap ─────────── v1.5.0 Installed Ipopt ─────────────────────────────── v1.13.0 Installed GR ────────────────────────────────── v0.73.19 Installed METIS_jll ─────────────────────────── v5.1.3+0 Installed MLJModelInterface ─────────────────── v1.12.0 Installing 85 artifacts Installed artifact Xorg_xcb_util_keysyms 17.8 KiB Installed artifact Xorg_libXinerama 50.1 KiB Installed artifact Xorg_libICE 384.9 KiB Installed artifact Xorg_libXrender 435.9 KiB Installed artifact fzf 3.3 MiB Installed artifact Ipopt 1.3 MiB Installed artifact Xorg_libxkbfile 486.7 KiB Installed artifact x264 2.1 MiB Installed artifact Xorg_libXcursor 227.1 KiB Installed 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v8.5.1+0 [e33a78d0] + Hwloc_jll v2.12.2+0 [9cc047cb] + Ipopt_jll v300.1400.1900+0 [c1c5ebd0] + LAME_jll v3.100.3+0 [88015f11] + LERC_jll v4.0.1+0 [dad2f222] + LLVMExtra_jll v0.0.38+0 [1d63c593] + LLVMOpenMP_jll v18.1.8+0 [dd4b983a] + LZO_jll v2.10.3+0 [81d17ec3] + L_BFGS_B_jll v3.0.1+0 [ad6e5548] + LibTracyClient_jll v0.9.1+6 [e9f186c6] + Libffi_jll v3.4.7+0 [7e76a0d4] + Libglvnd_jll v1.7.1+1 [4b2f31a3] + Libmount_jll v2.41.2+0 [89763e89] + Libtiff_jll v4.7.2+0 [38a345b3] + Libuuid_jll v2.41.2+0 [d00139f3] + METIS_jll v5.1.3+0 [d7ed1dd3] + MUMPS_seq_jll v500.800.100+0 [c8ffd9c3] + MbedTLS_jll v2.28.10+0 [e7412a2a] + Ogg_jll v1.3.6+0 [656ef2d0] + OpenBLAS32_jll v0.3.29+0 [91d4177d] + Opus_jll v1.5.2+0 [36c8627f] + Pango_jll v1.57.0+0 ⌅ [30392449] + Pixman_jll v0.44.2+0 [c0090381] + Qt6Base_jll v6.8.2+2 [629bc702] + Qt6Declarative_jll v6.8.2+1 [ce943373] + Qt6ShaderTools_jll v6.8.2+1 [e99dba38] + Qt6Wayland_jll v6.8.2+2 ⌅ [319450e9] + SPRAL_jll v2025.5.20+0 [a44049a8] + Vulkan_Loader_jll v1.3.243+0 [a2964d1f] + Wayland_jll v1.24.0+0 [ffd25f8a] + XZ_jll v5.8.1+0 [f67eecfb] + Xorg_libICE_jll v1.1.2+0 [c834827a] + Xorg_libSM_jll v1.2.6+0 [4f6342f7] + Xorg_libX11_jll v1.8.12+0 [0c0b7dd1] + Xorg_libXau_jll v1.0.13+0 [935fb764] + Xorg_libXcursor_jll v1.2.4+0 [a3789734] + Xorg_libXdmcp_jll v1.1.6+0 [1082639a] + Xorg_libXext_jll v1.3.7+0 [d091e8ba] + Xorg_libXfixes_jll v6.0.2+0 [a51aa0fd] + Xorg_libXi_jll v1.8.3+0 [d1454406] + Xorg_libXinerama_jll v1.1.6+0 [ec84b674] + Xorg_libXrandr_jll v1.5.5+0 [ea2f1a96] + Xorg_libXrender_jll v0.9.12+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0 [c7cfdc94] + Xorg_libxcb_jll v1.17.1+0 [cc61e674] + Xorg_libxkbfile_jll v1.1.3+0 [e920d4aa] + Xorg_xcb_util_cursor_jll v0.1.6+0 [12413925] + Xorg_xcb_util_image_jll v0.4.1+0 [2def613f] + Xorg_xcb_util_jll v0.4.1+0 [975044d2] + Xorg_xcb_util_keysyms_jll v0.4.1+0 [0d47668e] + Xorg_xcb_util_renderutil_jll v0.3.10+0 [c22f9ab0] + Xorg_xcb_util_wm_jll v0.4.2+0 [35661453] + Xorg_xkbcomp_jll v1.4.7+0 [33bec58e] + Xorg_xkeyboard_config_jll v2.44.0+0 [c5fb5394] + Xorg_xtrans_jll v1.6.0+0 [35ca27e7] + eudev_jll v3.2.14+0 [214eeab7] + fzf_jll v0.61.1+0 [a4ae2306] + libaom_jll v3.13.1+0 [0ac62f75] + libass_jll v0.17.4+0 [1183f4f0] + libdecor_jll v0.2.2+0 [2db6ffa8] + libevdev_jll v1.13.4+0 [f638f0a6] + libfdk_aac_jll v2.0.4+0 [36db933b] + libinput_jll v1.28.1+0 [b53b4c65] + libpng_jll v1.6.50+0 [f27f6e37] + libvorbis_jll v1.3.8+0 [009596ad] + mtdev_jll v1.1.7+0 [1270edf5] + x264_jll v10164.0.1+0 [dfaa095f] + x265_jll v4.1.0+0 [d8fb68d0] + xkbcommon_jll v1.9.2+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Building Conda ─→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/8f06b0cfa4c514c7b9546756dbae91fcfbc92dc9/build.log` Building PyCall → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/9816a3826b0ebf49ab4926e2b18842ad8b5c8f04/build.log` Test Successfully re-resolved Status `/tmp/jl_mjbkF4/Project.toml` [717c3277] AdaptiveMCMC v0.1.4 [0bf59076] AdvancedHMC v0.8.3 [4c88cf16] Aqua v0.8.14 [4fba245c] ArrayInterface v7.22.0 [76274a88] Bijectors v0.15.12 [336ed68f] CSV v0.10.15 [479239e8] Catalyst v15.0.8 [b0b7db55] ComponentArrays v0.15.30 [a93c6f00] DataFrames v1.8.1 [2b5f629d] DiffEqBase v6.191.0 [459566f4] DiffEqCallbacks v4.10.1 [31c24e10] Distributions v0.25.122 [26cc04aa] FiniteDifferences v0.12.33 ⌅ [f6369f11] ForwardDiff v0.10.39 [b6b21f68] Ipopt v1.13.0 [7ed4a6bd] LinearSolve v3.47.0 [6fdf6af0] LogDensityProblems v2.2.0 [996a588d] LogDensityProblemsAD v1.13.1 [c7f686f2] MCMCChains v7.6.0 ⌅ [961ee093] ModelingToolkit v9.84.0 [8913a72c] NonlinearSolve v4.12.0 [429524aa] Optim v1.13.2 ⌅ [7f7a1694] Optimization v4.8.0 ⌃ [36348300] OptimizationOptimJL v0.4.5 [1dea7af3] OrdinaryDiffEq v6.103.0 [6ad6398a] OrdinaryDiffEqBDF v1.10.1 [43230ef6] OrdinaryDiffEqRosenbrock v1.18.1 [2d112036] OrdinaryDiffEqSDIRK v1.7.0 [48d54b35] PEtab v3.11.0 [91a5bcdd] Plots v1.41.1 [d236fae5] PreallocationTools v0.4.34 [aea7be01] PrecompileTools v1.3.3 [438e738f] PyCall v1.96.4 [8a4e6c94] QuasiMonteCarlo v0.3.3 [37e2e3b7] ReverseDiff v1.16.1 [7e49a35a] RuntimeGeneratedFunctions v0.5.16 [210efffb] SBMLImporter v3.1.0 [1bc83da4] SafeTestsets v0.1.0 ⌅ [0bca4576] SciMLBase v2.120.0 [1ed8b502] SciMLSensitivity v7.90.0 [efcf1570] Setfield v1.1.2 [2913bbd2] StatsBase v0.34.8 ⌅ [c3572dad] Sundials v4.28.0 [ddb6d928] YAML v0.4.16 [8ba89e20] Distributed v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [f489334b] StyledStrings v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_mjbkF4/Manifest.toml` [47edcb42] ADTypes v1.19.0 [621f4979] AbstractFFTs v1.5.0 [80f14c24] AbstractMCMC v5.10.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.4.0 [717c3277] AdaptiveMCMC v0.1.4 [0bf59076] AdvancedHMC v0.8.3 [66dad0bd] AliasTables v1.1.3 [4c88cf16] Aqua v0.8.14 [dce04be8] ArgCheck v2.5.0 [ec485272] ArnoldiMethod v0.4.0 [4fba245c] ArrayInterface v7.22.0 [4c555306] ArrayLayouts v1.12.1 [a9b6321e] Atomix v1.1.2 [13072b0f] AxisAlgorithms v1.1.0 [39de3d68] AxisArrays v0.4.8 [198e06fe] BangBang v0.4.6 [9718e550] Baselet v0.1.1 [e2ed5e7c] Bijections v0.2.2 [76274a88] Bijectors v0.15.12 [d1d4a3ce] BitFlags v0.1.9 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [8e7c35d0] BlockArrays v1.9.3 [70df07ce] BracketingNonlinearSolve v1.6.0 [fa961155] CEnum v0.5.0 [2a0fbf3d] CPUSummary v0.2.7 [336ed68f] CSV v0.10.15 [7057c7e9] Cassette v0.3.14 [479239e8] Catalyst v15.0.8 [082447d4] ChainRules v1.72.6 [d360d2e6] ChainRulesCore v1.26.0 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DiffEqBase v6.191.0 [459566f4] DiffEqCallbacks v4.10.1 [77a26b50] DiffEqNoiseProcess v5.24.1 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.12 [8d63f2c5] DispatchDoctor v0.4.26 [31c24e10] Distributions v0.25.122 [ffbed154] DocStringExtensions v0.9.5 [5b8099bc] DomainSets v0.7.16 ⌃ [7c1d4256] DynamicPolynomials v0.6.3 [06fc5a27] DynamicQuantities v1.10.0 [4e289a0a] EnumX v1.0.5 [7da242da] Enzyme v0.13.104 [f151be2c] EnzymeCore v0.8.17 [460bff9d] ExceptionUnwrapping v0.1.11 [d4d017d3] ExponentialUtilities v1.28.0 [e2ba6199] ExprTools v0.1.10 [55351af7] ExproniconLite v0.10.14 [c87230d0] FFMPEG v0.4.5 [7a1cc6ca] FFTW v1.10.0 [7034ab61] FastBroadcast v0.3.5 [9aa1b823] FastClosures v0.3.2 [442a2c76] FastGaussQuadrature v1.1.0 [a4df4552] FastPower v1.2.0 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.15.0 [64ca27bc] FindFirstFunctions v1.4.2 [6a86dc24] FiniteDiff v2.29.0 [26cc04aa] FiniteDifferences v0.12.33 [53c48c17] FixedPointNumbers v0.8.5 [1fa38f19] Format v1.3.7 ⌅ [f6369f11] ForwardDiff v0.10.39 [f62d2435] FunctionProperties v0.1.2 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v0.1.3 [d9f16b24] Functors v0.5.2 [46192b85] GPUArraysCore v0.2.0 [61eb1bfa] GPUCompiler v1.7.4 [28b8d3ca] GR v0.73.19 [c145ed77] GenericSchur v0.5.6 [c27321d9] Glob v1.3.1 [86223c79] Graphs v1.13.1 [42e2da0e] Grisu v1.0.2 [cd3eb016] HTTP v1.10.19 [076d061b] HashArrayMappedTries v0.2.0 [34004b35] HypergeometricFunctions v0.3.28 [7869d1d1] IRTools v0.4.15 [615f187c] IfElse v0.1.1 [d25df0c9] Inflate v0.1.5 [22cec73e] InitialValues v0.3.1 [842dd82b] InlineStrings v1.4.5 [18e54dd8] IntegerMathUtils v0.1.3 [a98d9a8b] Interpolations v0.16.2 [8197267c] IntervalSets v0.7.13 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [b6b21f68] Ipopt v1.13.0 [92d709cd] IrrationalConstants v0.2.6 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [1019f520] JLFzf v0.1.11 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v1.3.0 [ae98c720] Jieko v0.2.1 [98e50ef6] JuliaFormatter v2.2.0 ⌅ [70703baa] JuliaSyntax v0.4.10 [ccbc3e58] JumpProcesses v9.19.1 [63c18a36] KernelAbstractions v0.9.39 [5ab0869b] KernelDensity v0.6.10 [ba0b0d4f] Krylov v0.10.2 [5be7bae1] LBFGSB v0.4.1 [929cbde3] LLVM v9.4.4 [b964fa9f] LaTeXStrings v1.4.0 [23fbe1c1] Latexify v0.16.10 [73f95e8e] LatticeRules v0.0.1 [10f19ff3] LayoutPointers v0.1.17 [5078a376] LazyArrays v2.9.1 [1d6d02ad] LeftChildRightSiblingTrees v0.2.1 [87fe0de2] LineSearch v0.1.4 [d3d80556] LineSearches v7.4.1 [7ed4a6bd] LinearSolve v3.47.0 [6fdf6af0] LogDensityProblems v2.2.0 [996a588d] LogDensityProblemsAD v1.13.1 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.2.0 [c7f686f2] MCMCChains v7.6.0 [be115224] MCMCDiagnosticTools v0.3.15 [e80e1ace] MLJModelInterface v1.12.0 [d8e11817] MLStyle v0.4.17 [1914dd2f] MacroTools v0.5.16 [d125e4d3] ManualMemory v0.1.8 [dbb5928d] MappedArrays v0.4.2 [bb5d69b7] MaybeInplace v0.1.4 [739be429] MbedTLS v1.1.9 [442fdcdd] Measures v0.3.3 [128add7d] MicroCollections v0.2.0 [e1d29d7a] Missings v1.2.0 ⌅ [961ee093] ModelingToolkit v9.84.0 [2e0e35c7] Moshi v0.3.7 [46d2c3a1] MuladdMacro v0.2.4 ⌃ [102ac46a] MultivariatePolynomials v0.5.9 [d8a4904e] MutableArithmetics v1.6.7 [d41bc354] NLSolversBase v7.10.0 [872c559c] NNlib v0.9.31 [77ba4419] NaNMath v1.1.3 [c020b1a1] NaturalSort v1.0.0 [8913a72c] NonlinearSolve v4.12.0 ⌃ [be0214bd] NonlinearSolveBase v2.2.0 [5959db7a] NonlinearSolveFirstOrder v1.10.0 [9a2c21bd] NonlinearSolveQuasiNewton v1.11.0 [26075421] NonlinearSolveSpectralMethods v1.6.0 [d8793406] ObjectFile v0.5.0 [6fe1bfb0] OffsetArrays v1.17.0 [4d8831e6] OpenSSL v1.6.0 [429524aa] Optim v1.13.2 [3bd65402] Optimisers v0.4.6 ⌅ [7f7a1694] Optimization v4.8.0 ⌅ [bca83a33] OptimizationBase v2.11.0 ⌃ [36348300] OptimizationOptimJL v0.4.5 [bac558e1] OrderedCollections v1.8.1 [1dea7af3] OrdinaryDiffEq v6.103.0 [89bda076] 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Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Test Summary: | Pass Total Time Aqua Quality Check | 10 10 17m16.4s  ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ======================================================================================  cmd: /opt/julia/bin/julia 2618 running 1 of 1  signal (10): User defined signal 1 gc_try_claim_and_push at /source/src/gc-stock.c:1690 [inlined] gc_mark_objarray at /source/src/gc-stock.c:1844 gc_mark_chunk at /source/src/gc-stock.c:2023 [inlined] gc_mark_and_steal at /source/src/gc-stock.c:2546 _jl_gc_collect at /source/src/gc-stock.c:3052 ijl_gc_collect at /source/src/gc-stock.c:3465 maybe_collect at /source/src/gc-stock.c:349 [inlined] jl_gc_small_alloc_inner at /source/src/gc-stock.c:725 jl_gc_small_alloc_noinline at /source/src/gc-stock.c:783 [inlined] jl_gc_alloc_ at /source/src/gc-stock.c:797 ijl_alloc_svec_uninit at /source/src/simplevector.c:77 ijl_alloc_svec at /source/src/simplevector.c:87 alloc_env at /source/src/subtype.c:309 [inlined] save_env at /source/src/subtype.c:330 intersect_all at /source/src/subtype.c:4356 intersect_aside at /source/src/subtype.c:2571 intersect at /source/src/subtype.c:4114 intersect_invariant at /source/src/subtype.c:3798 intersect at /source/src/subtype.c:4223 intersect_unionall_ at /source/src/subtype.c:3383 intersect_unionall at /source/src/subtype.c:3474 intersect at /source/src/subtype.c:4202 intersect_unionall_ at /source/src/subtype.c:3383 intersect_unionall at /source/src/subtype.c:3474 intersect at /source/src/subtype.c:4202 intersect_unionall_ at /source/src/subtype.c:3383 intersect_unionall at /source/src/subtype.c:3474 intersect at /source/src/subtype.c:4202 intersect_unionall_ at /source/src/subtype.c:3383 intersect_unionall at /source/src/subtype.c:3497 intersect at /source/src/subtype.c:4202 intersect_unionall_ at /source/src/subtype.c:3383 intersect_unionall at /source/src/subtype.c:3474 intersect at /source/src/subtype.c:4202 intersect_unionall_ at /source/src/subtype.c:3387 intersect_unionall at /source/src/subtype.c:3474 intersect at /source/src/subtype.c:4176 intersect_unionall_ at /source/src/subtype.c:3387 intersect_unionall at /source/src/subtype.c:3474 intersect at /source/src/subtype.c:4176 intersect_unionall_ at /source/src/subtype.c:3387 intersect_unionall at /source/src/subtype.c:3474 intersect at /source/src/subtype.c:4176 intersect_unionall_ at /source/src/subtype.c:3387 intersect_unionall at /source/src/subtype.c:3497 intersect at /source/src/subtype.c:4176 intersect_unionall_ at /source/src/subtype.c:3383 intersect_unionall at /source/src/subtype.c:3474 intersect at /source/src/subtype.c:4184 intersect_unionall_ at /source/src/subtype.c:3383 intersect_unionall at /source/src/subtype.c:3474 intersect at /source/src/subtype.c:4184 intersect_unionall_ at /source/src/subtype.c:3387 intersect_unionall at /source/src/subtype.c:3474 intersect at /source/src/subtype.c:4176 intersect_unionall_ at /source/src/subtype.c:3387 intersect_unionall at /source/src/subtype.c:3474 intersect at /source/src/subtype.c:4176 intersect_unionall_ at /source/src/subtype.c:3387 intersect_unionall at /source/src/subtype.c:3474 intersect at /source/src/subtype.c:4176 intersect_tuple at /source/src/subtype.c:3695 intersect at /source/src/subtype.c:4216 intersect_all at /source/src/subtype.c:4358 jl_type_intersection_env_s at /source/src/subtype.c:4606 jl_typemap_intersection_node_visitor at /source/src/typemap.c:543 jl_typemap_intersection_visitor at /source/src/typemap.c:805 jl_typemap_intersection_visitor at /source/src/typemap.c:791 jl_typemap_intersection_visitor at /source/src/typemap.c:726 get_intersect_matches at /source/src/gf.c:2020 [inlined] jl_method_table_activate at /source/src/gf.c:2892 jl_activate_methods at /source/src/staticdata_utils.c:915 [inlined] jl_restore_package_image_from_stream at /source/src/staticdata.c:4392 ijl_restore_incremental at /source/src/staticdata.c:4444 #_include_from_serialized#879 at ./loading.jl:1328 _include_from_serialized at ./loading.jl:1300 [inlined] #_require_search_from_serialized#896 at ./loading.jl:2162 _require_search_from_serialized at ./loading.jl:2069 [inlined] __require_prelocked at ./loading.jl:2719 _require_prelocked at ./loading.jl:2585 macro expansion at ./loading.jl:2513 [inlined] macro expansion at ./lock.jl:376 [inlined] __require at ./loading.jl:2477 jfptr___require_58962.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2284 [inlined] jl_f_invoke_in_world at /source/src/builtins.c:908 require at ./loading.jl:2453 [inlined] eval_import_path at ./module.jl:36 [inlined] eval_import_path_all at ./module.jl:60 _eval_using at ./module.jl:137 [inlined] _eval_using at ./module.jl:137 jfptr__eval_using_49254.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2284 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:679 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 jl_toplevel_eval_flex at /source/src/toplevel.c:742 jl_eval_toplevel_stmts at /source/src/toplevel.c:585 jl_eval_module_expr at /source/src/toplevel.c:248 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:650 jl_eval_toplevel_stmts at /source/src/toplevel.c:585 jl_toplevel_eval_flex at /source/src/toplevel.c:683 ijl_toplevel_eval at /source/src/toplevel.c:754 ijl_toplevel_eval_in at /source/src/toplevel.c:799 eval at ./boot.jl:489 include_string at ./loading.jl:3003 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 _include at ./loading.jl:3063 include at ./Base.jl:309 include_package_for_output at ./loading.jl:3157 jfptr_include_package_for_output_46448.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2284 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:679 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 jl_toplevel_eval_flex at /source/src/toplevel.c:742 jl_eval_toplevel_stmts at /source/src/toplevel.c:585 jl_toplevel_eval_flex at /source/src/toplevel.c:683 ijl_toplevel_eval at /source/src/toplevel.c:754 ijl_toplevel_eval_in at /source/src/toplevel.c:799 eval at ./boot.jl:489 include_string at ./loading.jl:3003 include_string at ./loading.jl:3013 [inlined] exec_options at ./client.jl:342 _start at ./client.jl:577 jfptr__start_51725.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2284 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x74cb76760249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file)  #= 9.4 ms =# precompile(Tuple{typeof(LinearSolve.__init__)}) #= 0.0 ms =# precompile(Tuple{typeof(OpenSpecFun_jll.__init__)}) #= 0.0 ms =# precompile(Tuple{typeof(OpenSpecFun_jll.find_artifact_dir)}) #= 13.8 ms =# precompile(Tuple{typeof(Base.issorted), Array{String, 1}, Base.Order.ReverseOrdering{Base.Order.ForwardOrdering}}) #= 0.0 ms =# precompile(Tuple{typeof(JLLWrappers.get_julia_libpaths)}) #= 13.1 ms =# precompile(Tuple{typeof(DifferentiationInterface.__init__)}) #= 87.8 ms =# precompile(Tuple{typeof(Reexport.reexport), Module, Expr}) #= 2.5 ms =# precompile(Tuple{Type{NamedTuple{(:all, :imported), T} where T<:Tuple}, Tuple{Bool, Bool}}) #= 3.0 ms =# precompile(Tuple{typeof(Base.pairs), NamedTuple{(:all, :imported), Tuple{Bool, Bool}}}) #= 2.0 ms =# precompile(Tuple{typeof(Base.merge), NamedTuple{(), Tuple{}}, Base.Pairs{Symbol, Bool, Nothing, NamedTuple{(:all, :imported), Tuple{Bool, Bool}}}}) #= 31.1 ms =# precompile(Tuple{typeof(Reexport.exported_names), Module})  ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ==============================================================  ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 2266 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1246 wait_forever at ./task.jl:1168 jfptr_wait_forever_74812.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2284 [inlined] start_task at /source/src/task.c:1272 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1246 wait_forever at ./task.jl:1168 jfptr_wait_forever_74812.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2284 [inlined] start_task at /source/src/task.c:1272 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.14/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000073811a7bfb20 Total snapshots: 674. Utilization: 0% ╎674 @Base/task.jl:1168 wait_forever() 673╎ 674 @Base/task.jl:1246 wait() ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.14/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000077ac965ffee0 Total snapshots: 684. Utilization: 0% ╎684 @Base/task.jl:1168 wait_forever() 683╎ 684 @Base/task.jl:1246 wait() [2266] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/PEtab/BwDKE/test/analytic_solution.jl:9 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1246 wait_forever at ./task.jl:1168 jfptr_wait_forever_74812.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2284 [inlined] start_task at /source/src/task.c:1272 unknown function (ip: (nil)) at (unknown file) Allocations: 41632002 (Pool: 41630734; Big: 1268); GC: 63  PkgEval terminated after 2730.8s: test duration exceeded the time limit