Package evaluation to test StochasticGene on Julia 1.14.0-DEV.1262 (4060c45d70*) started at 2025-11-19T01:49:02.618 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.85s ################################################################################ # Installation # Installing StochasticGene... Resolving package versions... Installed CommonWorldInvalidations ──────────── v1.0.0 Installed MKL_jll ───────────────────────────── v2025.2.0+0 Installed FastPower ─────────────────────────── v1.2.0 Installed SIMDTypes ─────────────────────────── v0.1.0 Installed InlineStrings ─────────────────────── v1.4.5 Installed OrderedCollections ────────────────── v1.8.1 Installed MultivariateStats ─────────────────── v0.10.3 Installed EnzymeCore ────────────────────────── v0.8.17 Installed OrdinaryDiffEqRosenbrock ──────────── v1.18.1 Installed NonlinearSolveSpectralMethods ─────── v1.6.0 Installed OrdinaryDiffEqExponentialRK ───────── v1.8.0 Installed CpuId ─────────────────────────────── v0.3.1 Installed PreallocationTools ────────────────── v0.4.34 Installed OrdinaryDiffEqFIRK ────────────────── v1.16.0 Installed Optim ─────────────────────────────── v1.13.2 Installed Compiler ──────────────────────────── v0.1.1 Installed NaNMath ───────────────────────────── v1.1.3 Installed StaticArrayInterface ──────────────── v1.8.0 Installed SentinelArrays ────────────────────── v1.4.8 Installed QuadGK ────────────────────────────── v2.11.2 Installed OpenSpecFun_jll ───────────────────── v0.5.6+0 Installed OrdinaryDiffEqQPRK ────────────────── v1.4.0 Installed LoweredCodeUtils ──────────────────── v3.4.4 Installed Revise ────────────────────────────── v3.12.1 Installed FastBroadcast ─────────────────────── v0.3.5 Installed NonlinearSolveBase ────────────────── v2.4.0 Installed Tables ────────────────────────────── v1.12.1 Installed Arpack ────────────────────────────── v0.5.4 Installed OrdinaryDiffEqLowOrderRK ──────────── v1.6.0 Installed EnumX ─────────────────────────────── v1.0.5 Installed BracketingNonlinearSolve ──────────── v1.6.0 Installed NLSolversBase ─────────────────────── v7.10.0 Installed DiffEqBase ────────────────────────── v6.191.0 Installed LinearSolve ───────────────────────── v3.47.0 Installed Jieko ─────────────────────────────── v0.2.1 Installed Reexport ──────────────────────────── v1.2.2 Installed InverseFunctions ──────────────────── v0.1.17 Installed Missings ──────────────────────────── v1.2.0 Installed Static ────────────────────────────── v1.3.1 Installed RegistryInstances ─────────────────── v0.1.0 Installed NonlinearSolve ────────────────────── v4.12.0 Installed Preferences ───────────────────────── v1.5.0 Installed TableTraits ───────────────────────── v1.0.1 Installed LaTeXStrings ──────────────────────── v1.4.0 Installed MaybeInplace ──────────────────────── v0.1.4 Installed OrdinaryDiffEqNordsieck ───────────── v1.4.0 Installed Crayons ───────────────────────────── v4.1.1 Installed OrdinaryDiffEqAdamsBashforthMoulton ─ v1.5.0 Installed SortingAlgorithms ─────────────────── v1.2.2 Installed RecursiveArrayTools ───────────────── v3.39.0 Installed OrdinaryDiffEqLinear ──────────────── v1.6.0 Installed UnPack ────────────────────────────── v1.0.2 Installed OpenSSH_jll ───────────────────────── v10.2.1+0 Installed ADTypes ───────────────────────────── v1.19.0 Installed MacroTools ────────────────────────── v0.5.16 Installed DiffResults ───────────────────────── v1.1.0 Installed GenericSchur ──────────────────────── v0.5.6 Installed ManualMemory ──────────────────────── v0.1.8 Installed DataStructures ────────────────────── v0.19.3 Installed oneTBB_jll ────────────────────────── v2022.0.0+1 Installed AbstractTrees ─────────────────────── v0.4.5 Installed DelimitedFiles ────────────────────── v1.9.1 Installed FillArrays ────────────────────────── v1.15.0 Installed CodecZlib ─────────────────────────── v0.7.8 Installed ExprTools ─────────────────────────── v0.1.10 Installed SparseMatrixColorings ─────────────── v0.4.23 Installed StatsBase ─────────────────────────── v0.34.8 Installed IntelOpenMP_jll ───────────────────── v2025.2.0+0 Installed SciMLJacobianOperators ────────────── v0.1.11 Installed ArrayInterface ────────────────────── v7.22.0 Installed DataValueInterfaces ───────────────── v1.0.0 Installed LayoutPointers ────────────────────── v0.1.17 Installed CommonSubexpressions ──────────────── v0.3.1 Installed LoggingExtras ─────────────────────── v1.2.0 Installed ConcreteStructs ───────────────────── v0.2.3 Installed Expat_jll ─────────────────────────── v2.7.3+0 Installed IrrationalConstants ───────────────── v0.2.6 Installed GPUArraysCore ─────────────────────── v0.2.0 Installed TruncatedStacktraces ──────────────── v1.4.0 Installed OrdinaryDiffEqRKN ─────────────────── v1.5.0 Installed ArrayLayouts ──────────────────────── v1.12.0 Installed IOCapture ─────────────────────────── v1.0.0 Installed OrdinaryDiffEqStabilizedIRK ───────── v1.6.0 Installed OrdinaryDiffEqExtrapolation ───────── v1.9.0 Installed LSODA_jll ─────────────────────────── v0.1.2+0 Installed Setfield ──────────────────────────── v1.1.2 Installed PooledArrays ──────────────────────── v1.4.3 Installed OrdinaryDiffEqPRK ─────────────────── v1.4.0 Installed WorkerUtilities ───────────────────── v1.6.1 Installed NonlinearSolveQuasiNewton ─────────── v1.11.0 Installed PDMats ────────────────────────────── v0.11.36 Installed OrdinaryDiffEqHighOrderRK ─────────── v1.5.0 Installed CompositionsBase ──────────────────── v0.1.2 Installed DocStringExtensions ───────────────── v0.9.5 Installed CommonSolve ───────────────────────── v0.2.4 Installed ForwardDiff ───────────────────────── v1.3.0 Installed ZMQ ───────────────────────────────── v1.5.1 Installed Rmath_jll ─────────────────────────── v0.5.1+0 Installed VersionParsing ────────────────────── v1.3.0 Installed Moshi ─────────────────────────────── v0.3.7 Installed DifferentiationInterface ──────────── v0.7.12 Installed SimpleUnPack ──────────────────────── v1.1.0 Installed OrdinaryDiffEqStabilizedRK ────────── v1.4.0 Installed BitTwiddlingConvenienceFunctions ──── v0.1.6 Installed AliasTables ───────────────────────── v1.1.3 Installed IteratorInterfaceExtensions ───────── v1.0.0 Installed LineSearch ────────────────────────── v0.1.4 Installed FunctionWrappersWrappers ──────────── v0.1.3 Installed RecipesBase ───────────────────────── v1.3.4 Installed DataAPI ───────────────────────────── v1.16.0 Installed Git_LFS_jll ───────────────────────── v3.7.0+0 Installed InvertedIndices ───────────────────── v1.3.1 Installed OrdinaryDiffEqBDF ─────────────────── v1.10.1 Installed SciMLOperators ────────────────────── v1.11.0 Installed OrdinaryDiffEqSymplecticRK ────────── v1.7.0 Installed Conda ─────────────────────────────── v1.10.3 Installed SciMLStructures ───────────────────── v1.7.0 Installed Krylov ────────────────────────────── v0.10.2 Installed LSODA ─────────────────────────────── v0.7.5 Installed FastGaussQuadrature ───────────────── v1.1.0 Installed StaticArraysCore ──────────────────── v1.4.4 Installed StaticArrays ──────────────────────── v1.9.15 Installed OrdinaryDiffEqLowStorageRK ────────── v1.7.0 Installed CodeTracking ──────────────────────── v2.0.2 Installed AbstractFFTs ──────────────────────── v1.5.0 Installed OrdinaryDiffEq ────────────────────── v6.103.0 Installed StringManipulation ────────────────── v0.4.1 Installed SciMLPublic ───────────────────────── v1.0.0 Installed OrdinaryDiffEqDifferentiation ─────── v1.16.1 Installed Requires ──────────────────────────── v1.3.1 Installed OrdinaryDiffEqNonlinearSolve ──────── v1.15.0 Installed FunctionWrappers ──────────────────── v1.1.3 Installed CSV ───────────────────────────────── v0.10.15 Installed LogExpFunctions ───────────────────── v0.3.29 Installed DiffRules ─────────────────────────── v1.15.1 Installed JuliaInterpreter ──────────────────── v0.10.7 Installed OrdinaryDiffEqCore ────────────────── v1.36.0 Installed PrettyTables ──────────────────────── v3.1.0 Installed SciMLBase ─────────────────────────── v2.127.0 Installed Distributions ─────────────────────── v0.25.122 Installed NonlinearSolveFirstOrder ──────────── v1.10.0 Installed JSON ──────────────────────────────── v0.21.4 Installed Arpack_jll ────────────────────────── v3.5.1+1 Installed Git_jll ───────────────────────────── v2.51.3+0 Installed Rmath ─────────────────────────────── v0.9.0 Installed Documenter ────────────────────────── v1.16.0 Installed Parsers ───────────────────────────── v2.8.3 Installed OrdinaryDiffEqExplicitRK ──────────── v1.4.0 Installed libsodium_jll ─────────────────────── v1.0.21+0 Installed FastClosures ──────────────────────── v0.3.2 Installed FiniteDiff ────────────────────────── v2.29.0 Installed CloseOpenIntervals ────────────────── v0.1.13 Installed Polyester ─────────────────────────── v0.7.18 Installed StatsFuns ─────────────────────────── v1.5.2 Installed ZeroMQ_jll ────────────────────────── v4.3.6+0 Installed OrdinaryDiffEqFeagin ──────────────── v1.4.0 Installed OrdinaryDiffEqIMEXMultistep ───────── v1.7.0 Installed WeakRefStrings ────────────────────── v1.4.2 Installed JLLWrappers ───────────────────────── v1.7.1 Installed IJulia ────────────────────────────── v1.32.1 Installed OrdinaryDiffEqSSPRK ───────────────── v1.7.0 Installed DataFrames ────────────────────────── v1.8.1 Installed OrdinaryDiffEqPDIRK ───────────────── v1.6.0 Installed ThreadingUtilities ────────────────── v0.5.5 Installed OrdinaryDiffEqSDIRK ───────────────── v1.7.0 Installed OrdinaryDiffEqDefault ─────────────── v1.8.0 Installed Accessors ─────────────────────────── v0.1.42 Installed FilePathsBase ─────────────────────── v0.9.24 Installed ExponentialUtilities ──────────────── v1.28.0 Installed OrdinaryDiffEqVerner ──────────────── v1.6.0 Installed Adapt ─────────────────────────────── v4.4.0 Installed ConstructionBase ──────────────────── v1.6.0 Installed RuntimeGeneratedFunctions ─────────── v0.5.16 Installed HypergeometricFunctions ───────────── v0.3.28 Installed Compat ────────────────────────────── v4.18.1 Installed PositiveFactorizations ────────────── v0.2.4 Installed StrideArraysCore ──────────────────── v0.5.8 Installed SymbolicIndexingInterface ─────────── v0.3.46 Installed Statistics ────────────────────────── v1.11.1 Installed TranscodingStreams ────────────────── v0.11.3 Installed PrecompileTools ───────────────────── v1.3.3 Installed StatsAPI ──────────────────────────── v1.7.1 Installed TimerOutputs ──────────────────────── v0.5.29 Installed MarkdownAST ───────────────────────── v0.1.2 Installed LazyArrays ────────────────────────── v2.9.0 Installed ExproniconLite ────────────────────── v0.10.14 Installed ChainRulesCore ────────────────────── v1.26.0 Installed StochasticGene ────────────────────── v1.5.10 Installed CPUSummary ────────────────────────── v0.2.7 Installed IfElse ────────────────────────────── v0.1.1 Installed Parameters ────────────────────────── v0.12.3 Installed MuladdMacro ───────────────────────── v0.2.4 Installed SciMLLogging ──────────────────────── v1.5.0 Installed PtrArrays ─────────────────────────── v1.3.0 Installed LazilyInitializedFields ───────────── v1.3.0 Installed Git ───────────────────────────────── v1.5.0 Installed Libiconv_jll ──────────────────────── v1.18.0+0 Installed OrdinaryDiffEqTsit5 ───────────────── v1.5.0 Installed FFTW_jll ──────────────────────────── v3.3.11+0 Installed SimpleNonlinearSolve ──────────────── v2.9.0 Installed SpecialFunctions ──────────────────── v2.6.1 Installed FFTW ──────────────────────────────── v1.10.0 Installed LineSearches ──────────────────────── v7.4.0 Installed OrdinaryDiffEqFunctionMap ─────────── v1.5.0 Installed PolyesterWeave ────────────────────── v0.2.2 Installed ANSIColoredPrinters ───────────────── v0.0.1 Installing 12 artifacts Installed artifact Rmath 121.9 KiB Installed artifact Arpack 147.2 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact LSODA 24.9 KiB Installed artifact ZeroMQ 316.1 KiB Installed artifact Expat 283.3 KiB Installed artifact OpenSSH 4.3 MiB Installed artifact FFTW 2.2 MiB Installed artifact libsodium 1.6 MiB Installed artifact Libiconv 1.9 MiB Installed artifact Git_LFS 9.6 MiB Installed artifact Git 48.9 MiB Updating `~/.julia/environments/v1.14/Project.toml` [a2598c62] + StochasticGene v1.5.10 Updating `~/.julia/environments/v1.14/Manifest.toml` [47edcb42] + ADTypes v1.19.0 [a4c015fc] + ANSIColoredPrinters v0.0.1 [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [7d9fca2a] + Arpack v0.5.4 [4fba245c] + ArrayInterface v7.22.0 [4c555306] + ArrayLayouts v1.12.0 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [70df07ce] + BracketingNonlinearSolve v1.6.0 [2a0fbf3d] + CPUSummary v0.2.7 [336ed68f] + CSV v0.10.15 [d360d2e6] + ChainRulesCore v1.26.0 [fb6a15b2] + CloseOpenIntervals v0.1.13 [da1fd8a2] + CodeTracking v2.0.2 [944b1d66] + CodecZlib v0.7.8 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [807dbc54] + Compiler v0.1.1 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [8f4d0f93] + Conda v1.10.3 [187b0558] + ConstructionBase v1.6.0 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [2b5f629d] + DiffEqBase v6.191.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.12 [31c24e10] + Distributions v0.25.122 [ffbed154] + DocStringExtensions v0.9.5 [e30172f5] + Documenter v1.16.0 [4e289a0a] + EnumX v1.0.5 [f151be2c] + EnzymeCore v0.8.17 [d4d017d3] + ExponentialUtilities v1.28.0 [e2ba6199] + ExprTools v0.1.10 [55351af7] + ExproniconLite v0.10.14 [7a1cc6ca] + FFTW v1.10.0 [7034ab61] + FastBroadcast v0.3.5 [9aa1b823] + FastClosures v0.3.2 [442a2c76] + FastGaussQuadrature v1.1.0 [a4df4552] + FastPower v1.2.0 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.15.0 [6a86dc24] + FiniteDiff v2.29.0 [f6369f11] + ForwardDiff v1.3.0 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 [46192b85] + GPUArraysCore v0.2.0 [c145ed77] + GenericSchur v0.5.6 [d7ba0133] + Git v1.5.0 [34004b35] + HypergeometricFunctions v0.3.28 [7073ff75] + IJulia v1.32.1 [b5f81e59] + IOCapture v1.0.0 [615f187c] + IfElse v0.1.1 [842dd82b] + InlineStrings v1.4.5 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 ⌅ [682c06a0] + JSON v0.21.4 [ae98c720] + Jieko v0.2.1 [aa1ae85d] + JuliaInterpreter v0.10.7 [ba0b0d4f] + Krylov v0.10.2 [7f56f5a3] + LSODA v0.7.5 [b964fa9f] + LaTeXStrings v1.4.0 [10f19ff3] + LayoutPointers v0.1.17 [0e77f7df] + LazilyInitializedFields v1.3.0 [5078a376] + LazyArrays v2.9.0 [87fe0de2] + LineSearch v0.1.4 [d3d80556] + LineSearches v7.4.0 [7ed4a6bd] + LinearSolve v3.47.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 [6f1432cf] + LoweredCodeUtils v3.4.4 [1914dd2f] + MacroTools 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OrdinaryDiffEqFIRK v1.16.0 [101fe9f7] + OrdinaryDiffEqFeagin v1.4.0 [d3585ca7] + OrdinaryDiffEqFunctionMap v1.5.0 [d28bc4f8] + OrdinaryDiffEqHighOrderRK v1.5.0 [9f002381] + OrdinaryDiffEqIMEXMultistep v1.7.0 [521117fe] + OrdinaryDiffEqLinear v1.6.0 [1344f307] + OrdinaryDiffEqLowOrderRK v1.6.0 [b0944070] + OrdinaryDiffEqLowStorageRK v1.7.0 [127b3ac7] + OrdinaryDiffEqNonlinearSolve v1.15.0 [c9986a66] + OrdinaryDiffEqNordsieck v1.4.0 [5dd0a6cf] + OrdinaryDiffEqPDIRK v1.6.0 [5b33eab2] + OrdinaryDiffEqPRK v1.4.0 [04162be5] + OrdinaryDiffEqQPRK v1.4.0 [af6ede74] + OrdinaryDiffEqRKN v1.5.0 [43230ef6] + OrdinaryDiffEqRosenbrock v1.18.1 [2d112036] + OrdinaryDiffEqSDIRK v1.7.0 [669c94d9] + OrdinaryDiffEqSSPRK v1.7.0 [e3e12d00] + OrdinaryDiffEqStabilizedIRK v1.6.0 [358294b1] + OrdinaryDiffEqStabilizedRK v1.4.0 [fa646aed] + OrdinaryDiffEqSymplecticRK v1.7.0 [b1df2697] + OrdinaryDiffEqTsit5 v1.5.0 [79d7bb75] + OrdinaryDiffEqVerner v1.6.0 [90014a1f] + PDMats v0.11.36 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 [f517fe37] + Polyester v0.7.18 [1d0040c9] + PolyesterWeave v0.2.2 [2dfb63ee] + PooledArrays v1.4.3 [85a6dd25] + PositiveFactorizations v0.2.4 [d236fae5] + PreallocationTools v0.4.34 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [08abe8d2] + PrettyTables v3.1.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [3cdcf5f2] + RecipesBase v1.3.4 [731186ca] + RecursiveArrayTools v3.39.0 [189a3867] + Reexport v1.2.2 [2792f1a3] + RegistryInstances v0.1.0 [ae029012] + Requires v1.3.1 [295af30f] + Revise v3.12.1 [79098fc4] + Rmath v0.9.0 [7e49a35a] + RuntimeGeneratedFunctions v0.5.16 [94e857df] + SIMDTypes v0.1.0 [0bca4576] + SciMLBase v2.127.0 [19f34311] + SciMLJacobianOperators v0.1.11 [a6db7da4] + SciMLLogging v1.5.0 [c0aeaf25] + SciMLOperators v1.11.0 [431bcebd] + SciMLPublic v1.0.0 [53ae85a6] + SciMLStructures v1.7.0 [91c51154] + SentinelArrays v1.4.8 [efcf1570] + Setfield v1.1.2 [727e6d20] + SimpleNonlinearSolve v2.9.0 [ce78b400] + SimpleUnPack v1.1.0 [a2af1166] + SortingAlgorithms v1.2.2 [0a514795] + SparseMatrixColorings v0.4.23 [276daf66] + SpecialFunctions v2.6.1 [aedffcd0] + Static v1.3.1 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.8 [4c63d2b9] + StatsFuns v1.5.2 [a2598c62] + StochasticGene v1.5.10 [7792a7ef] + StrideArraysCore v0.5.8 [892a3eda] + StringManipulation v0.4.1 [2efcf032] + SymbolicIndexingInterface v0.3.46 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [8290d209] + ThreadingUtilities v0.5.5 [a759f4b9] + TimerOutputs v0.5.29 [3bb67fe8] + TranscodingStreams v0.11.3 [781d530d] + TruncatedStacktraces v1.4.0 [3a884ed6] + UnPack v1.0.2 [81def892] + VersionParsing v1.3.0 [ea10d353] + WeakRefStrings v1.4.2 [76eceee3] + WorkerUtilities v1.6.1 [c2297ded] + ZMQ v1.5.1 ⌅ [68821587] + Arpack_jll v3.5.1+1 [2e619515] + Expat_jll v2.7.3+0 [f5851436] + FFTW_jll v3.3.11+0 [020c3dae] + Git_LFS_jll v3.7.0+0 [f8c6e375] + Git_jll v2.51.3+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [aae0fff6] + LSODA_jll v0.1.2+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [856f044c] + MKL_jll v2025.2.0+0 [9bd350c2] + OpenSSH_jll v10.2.1+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [8f1865be] + ZeroMQ_jll v4.3.6+0 [a9144af2] + libsodium_jll v1.0.21+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.16.0+0 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.68.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building Conda ─→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/8f06b0cfa4c514c7b9546756dbae91fcfbc92dc9/build.log` Building IJulia → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/72e44ca89ce7f50eabbe9f4ac3594d51b8a185e9/build.log` Installation completed after 76.62s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... WARNING: Imported binding Operations.project_rel_path was undeclared at import time during import to TestEnv. 6821.5 ms ✓ TestEnv 1 dependency successfully precompiled in 7 seconds. 27 already precompiled. 1 dependency had output during precompilation: ┌ TestEnv │ WARNING: Imported binding Operations.project_rel_path was undeclared at import time during import to TestEnv. └ ┌ Error: Failed to use TestEnv.jl; test dependencies will not be precompiled │ exception = │ UndefVarError: `project_rel_path` not defined in `TestEnv` │ Suggestion: this global was defined as `Pkg.Operations.project_rel_path` but not assigned a value. │ Stacktrace: │ [1] get_test_dir(ctx::Pkg.Types.Context, pkgspec::PackageSpec) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:75 │ [2] test_dir_has_project_file │ @ ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:52 [inlined] │ [3] maybe_gen_project_override! │ @ ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:83 [inlined] │ [4] activate(pkg::String; allow_reresolve::Bool) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/activate_set.jl:12 │ [5] activate(pkg::String) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/activate_set.jl:9 │ [6] top-level scope │ @ /PkgEval.jl/scripts/precompile.jl:24 │ [7] include(mod::Module, _path::String) │ @ Base ./Base.jl:309 │ [8] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:344 │ [9] _start() │ @ Base ./client.jl:577 └ @ Main /PkgEval.jl/scripts/precompile.jl:26 Precompiling package dependencies... Precompiling packages... 5002.4 ms ✓ MacroTools 1805.9 ms ✓ InlineStrings 866.5 ms ✓ Reexport 1267.4 ms ✓ ConstructionBase 2219.9 ms ✓ IrrationalConstants 1238.3 ms ✓ DataValueInterfaces 1158.1 ms ✓ StatsAPI 1075.3 ms ✓ LazilyInitializedFields 808.4 ms ✓ VersionParsing 1125.8 ms ✓ CommonSolve 1297.8 ms ✓ TranscodingStreams 838.8 ms ✓ LaTeXStrings 1167.4 ms ✓ Statistics 917.3 ms ✓ StaticArraysCore 1340.1 ms ✓ EnzymeCore 944.9 ms ✓ IfElse 848.8 ms ✓ PtrArrays 1212.4 ms ✓ ANSIColoredPrinters 941.7 ms ✓ ManualMemory 928.6 ms ✓ PositiveFactorizations 1034.7 ms ✓ DataAPI 854.6 ms ✓ SciMLPublic 3731.5 ms ✓ ExproniconLite 863.0 ms ✓ CommonWorldInvalidations 869.9 ms ✓ FastPower 896.7 ms ✓ InvertedIndices 996.3 ms ✓ InverseFunctions 814.1 ms ✓ CompositionsBase 1151.4 ms ✓ AbstractTrees 822.3 ms ✓ SimpleUnPack 777.6 ms ✓ MuladdMacro 1103.5 ms ✓ AbstractFFTs 824.7 ms ✓ EnumX 992.6 ms ✓ WorkerUtilities 2108.5 ms ✓ FillArrays 880.8 ms ✓ ExprTools 838.3 ms ✓ UnPack 932.9 ms ✓ ConcreteStructs 1262.5 ms ✓ OrderedCollections 1515.3 ms ✓ FunctionWrappers 1459.7 ms ✓ ADTypes 1354.9 ms ✓ DocStringExtensions 939.4 ms ✓ FastClosures 1704.3 ms ✓ Compiler 751.7 ms ✓ SIMDTypes 767.0 ms ✓ IteratorInterfaceExtensions 1907.7 ms ✓ Crayons 941.2 ms ✓ IOCapture 1154.4 ms ✓ DelimitedFiles 14954.0 ms ✓ Krylov 2168.3 ms ✓ GenericSchur 1086.8 ms ✓ NaNMath 1146.5 ms ✓ Requires 1245.8 ms ✓ SuiteSparse 1707.5 ms ✓ CpuId 2638.3 ms ✓ SentinelArrays 1143.2 ms ✓ LoggingExtras 1545.7 ms ✓ CodeTracking 1113.1 ms ✓ Compat 1191.6 ms ✓ Preferences 1690.6 ms ✓ CommonSubexpressions 805.0 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 5090.3 ms ✓ RegistryInstances 916.4 ms ✓ CodecZlib 1342.7 ms ✓ Statistics → SparseArraysExt 806.6 ms ✓ DiffResults 1050.1 ms ✓ AliasTables 1672.4 ms ✓ ThreadingUtilities 937.9 ms ✓ Missings 975.8 ms ✓ PooledArrays 3199.1 ms ✓ Jieko 842.6 ms ✓ InverseFunctions → InverseFunctionsDatesExt 1557.2 ms ✓ InverseFunctions → InverseFunctionsTestExt 911.4 ms ✓ CompositionsBase → CompositionsBaseInverseFunctionsExt 1725.3 ms ✓ MarkdownAST 3935.9 ms ✓ AbstractFFTs → AbstractFFTsTestExt 1493.9 ms ✓ FillArrays → FillArraysSparseArraysExt 929.8 ms ✓ FillArrays → FillArraysStatisticsExt 3304.4 ms ✓ TimerOutputs 883.1 ms ✓ RuntimeGeneratedFunctions 979.5 ms ✓ Parameters 3539.9 ms ✓ DataStructures 790.7 ms ✓ FunctionWrappersWrappers 776.2 ms ✓ ADTypes → ADTypesConstructionBaseExt 2670.3 ms ✓ DifferentiationInterface 1275.4 ms ✓ ADTypes → ADTypesEnzymeCoreExt 1547.1 ms ✓ LogExpFunctions 820.3 ms ✓ TableTraits 1062.6 ms ✓ Adapt 1791.0 ms ✓ PDMats 10926.0 ms ✓ JuliaInterpreter 787.4 ms ✓ Compat → CompatLinearAlgebraExt 890.6 ms ✓ PrecompileTools 1176.9 ms ✓ JLLWrappers 1674.5 ms ✓ TruncatedStacktraces 1316.5 ms ✓ SciMLLogging 2911.7 ms ✓ Setfield 15618.1 ms ✓ Moshi 4635.9 ms ✓ Accessors 1013.2 ms ✓ SortingAlgorithms 2585.1 ms ✓ QuadGK 1564.7 ms ✓ DifferentiationInterface → DifferentiationInterfaceSparseArraysExt 1125.2 ms ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt 1950.3 ms ✓ Tables 1127.4 ms ✓ ArrayInterface 1237.1 ms ✓ Adapt → AdaptSparseArraysExt 1165.4 ms ✓ GPUArraysCore 749.0 ms ✓ EnzymeCore → AdaptExt 1463.5 ms ✓ FillArrays → FillArraysPDMatsExt 17523.5 ms ✓ LoweredCodeUtils 2632.2 ms ✓ ChainRulesCore 2082.1 ms ✓ FilePathsBase 3076.9 ms ✓ StringManipulation 13109.1 ms ✓ StaticArrays 2783.5 ms ✓ RecipesBase 15872.5 ms ✓ Parsers 4979.5 ms ✓ Static 11133.7 ms ✓ SparseMatrixColorings 1718.7 ms ✓ libsodium_jll 1357.8 ms ✓ Rmath_jll 1952.3 ms ✓ OpenSpecFun_jll 4782.0 ms ✓ IntelOpenMP_jll 4546.9 ms ✓ oneTBB_jll 1370.3 ms ✓ Arpack_jll 1406.0 ms ✓ Git_LFS_jll 1367.6 ms ✓ FFTW_jll 1426.9 ms ✓ OpenSSH_jll 1354.7 ms ✓ LSODA_jll 1357.9 ms ✓ Libiconv_jll 1403.0 ms ✓ Expat_jll 1742.8 ms ✓ Accessors → TestExt 2375.9 ms ✓ Accessors → LinearAlgebraExt 4194.3 ms ✓ StatsBase 732.5 ms ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 1903.2 ms ✓ MaybeInplace 1230.3 ms ✓ ArrayInterface → ArrayInterfaceSparseArraysExt 811.0 ms ✓ SciMLStructures 1619.7 ms ✓ PreallocationTools 769.7 ms ✓ DifferentiationInterface → DifferentiationInterfaceGPUArraysCoreExt 746.7 ms ✓ ArrayInterface → ArrayInterfaceGPUArraysCoreExt ┌ Warning: precompile directive │ precompile(Tuple{mbody.sig.parameters[1], Symbol, Bool, Bool, Iterators.Pairs{Symbol, Bool, Tuple{Symbol}, NamedTuple{(:skip_include,), Tuple{Bool}}}, typeof(methods_by_execution!), Compiled, MI, Module, Expr}) │ failed. Please report an issue in Revise (after checking for duplicates) or remove this directive. └ @ Revise ~/.julia/packages/Revise/nLE4h/src/precompile.jl:65 10415.6 ms ✓ Revise 1249.3 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 867.4 ms ✓ AbstractFFTs → AbstractFFTsChainRulesCoreExt 791.3 ms ✓ ADTypes → ADTypesChainRulesCoreExt 891.5 ms ✓ DifferentiationInterface → DifferentiationInterfaceChainRulesCoreExt 2889.7 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 796.8 ms ✓ ArrayInterface → ArrayInterfaceChainRulesCoreExt 2586.2 ms ✓ FilePathsBase → FilePathsBaseTestExt 880.5 ms ✓ FilePathsBase → FilePathsBaseMmapExt 36407.4 ms ✓ PrettyTables 1321.5 ms ✓ StaticArrays → StaticArraysStatisticsExt 1405.8 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 1379.5 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 22766.3 ms ✓ ArrayLayouts 1405.9 ms ✓ DifferentiationInterface → DifferentiationInterfaceStaticArraysExt 1361.2 ms ✓ Adapt → AdaptStaticArraysExt 1491.9 ms ✓ Accessors → StaticArraysExt 3667.5 ms ✓ JSON 953.6 ms ✓ InlineStrings → ParsersExt 876.5 ms ✓ BitTwiddlingConvenienceFunctions 2217.6 ms ✓ CPUSummary 3777.2 ms ✓ StaticArrayInterface 1977.0 ms ✓ DifferentiationInterface → DifferentiationInterfaceSparseMatrixColoringsExt 1780.3 ms ✓ ZeroMQ_jll 1651.6 ms ✓ Rmath 5092.8 ms ✓ SpecialFunctions  Downloading artifact: IntelOpenMP  Downloading artifact: oneTBB 10743.1 ms ✓ MKL_jll 1394.2 ms ✓ Arpack 1467.6 ms ✓ Git_jll 4580.6 ms ✓ SciMLOperators 1412.5 ms ✓ PDMats → StatsBaseExt 1291.8 ms ✓ FiniteDiff 3557.3 ms ✓ SymbolicIndexingInterface 1677.7 ms ✓ MaybeInplace → MaybeInplaceSparseArraysExt 40824.7 ms ✓ ExponentialUtilities 3996.2 ms ✓ Revise → DistributedExt 86527.7 ms ✓ DataFrames 3445.0 ms ✓ ArrayLayouts → ArrayLayoutsSparseArraysExt 1629.9 ms ✓ Conda 2461.3 ms ✓ WeakRefStrings 1692.5 ms ✓ PolyesterWeave 1502.3 ms ✓ StaticArrayInterface → StaticArrayInterfaceStaticArraysExt 1024.3 ms ✓ CloseOpenIntervals 1202.6 ms ✓ LayoutPointers 4864.6 ms ✓ ZMQ 4032.2 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 4797.7 ms ✓ FastGaussQuadrature 2373.9 ms ✓ HypergeometricFunctions 1227.0 ms ✓ DiffRules 6138.8 ms ✓ FFTW 887.1 ms ✓ Git 941.1 ms ✓ SciMLOperators → SciMLOperatorsStaticArraysCoreExt 1491.4 ms ✓ SciMLOperators → SciMLOperatorsSparseArraysExt 1363.7 ms ✓ FiniteDiff → FiniteDiffStaticArraysExt 1252.1 ms ✓ FiniteDiff → FiniteDiffSparseArraysExt 972.5 ms ✓ DifferentiationInterface → DifferentiationInterfaceFiniteDiffExt 3442.3 ms ✓ SymbolicIndexingInterface → SymbolicIndexingInterfacePrettyTablesExt 3693.8 ms ✓ RecursiveArrayTools 5148.1 ms ✓ ExponentialUtilities → ExponentialUtilitiesStaticArraysExt 6975.2 ms ✓ LazyArrays 28436.3 ms ✓ CSV 1964.7 ms ✓ StrideArraysCore 15456.8 ms ✓ IJulia 2746.5 ms ✓ StatsFuns 6350.1 ms ✓ ForwardDiff 45028.0 ms ✓ Documenter 1738.9 ms ✓ RecursiveArrayTools → RecursiveArrayToolsSparseArraysExt 1176.0 ms ✓ RecursiveArrayTools → RecursiveArrayToolsTablesExt 24342.9 ms ✓ SciMLBase 3655.0 ms ✓ LazyArrays → LazyArraysStaticArraysExt 1816.0 ms ✓ Polyester 3205.6 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 990.1 ms ✓ StatsFuns → StatsFunsInverseFunctionsExt 8982.5 ms ✓ Distributions 1958.0 ms ✓ ForwardDiff → ForwardDiffStaticArraysExt 1190.1 ms ✓ FastPower → FastPowerForwardDiffExt 1460.5 ms ✓ DifferentiationInterface → DifferentiationInterfaceForwardDiffExt 1245.9 ms ✓ PreallocationTools → PreallocationToolsForwardDiffExt 1470.0 ms ✓ RecursiveArrayTools → RecursiveArrayToolsForwardDiffExt 2778.2 ms ✓ SciMLBase → SciMLBaseChainRulesCoreExt 3261.2 ms ✓ SciMLBase → SciMLBaseForwardDiffExt 2709.9 ms ✓ SciMLBase → SciMLBaseDifferentiationInterfaceExt 1875.1 ms ✓ FastBroadcast 3427.6 ms ✓ Distributions → DistributionsTestExt 2801.7 ms ✓ Distributions → DistributionsChainRulesCoreExt 3638.1 ms ✓ MultivariateStats 4118.3 ms ✓ SciMLBase → SciMLBaseDistributionsExt 2242.6 ms ✓ NLSolversBase 19212.5 ms ✓ LinearSolve 7317.1 ms ✓ SciMLJacobianOperators 1860.5 ms ✓ RecursiveArrayTools → RecursiveArrayToolsFastBroadcastExt 4225.2 ms ✓ LineSearches 5710.6 ms ✓ LinearSolve → LinearSolveEnzymeExt 9962.2 ms ✓ LinearSolve → LinearSolveSparseArraysExt 8916.1 ms ✓ LinearSolve → LinearSolveForwardDiffExt 10277.3 ms ✓ LineSearch 15960.8 ms ✓ NonlinearSolveBase 6378.2 ms ✓ DiffEqBase 6619.8 ms ✓ Optim 3084.9 ms ✓ LineSearch → LineSearchLineSearchesExt 3535.8 ms ✓ NonlinearSolveBase → NonlinearSolveBaseSparseMatrixColoringsExt 3508.5 ms ✓ NonlinearSolveBase → NonlinearSolveBaseSparseArraysExt 2901.8 ms ✓ NonlinearSolveBase → NonlinearSolveBaseChainRulesCoreExt 6092.4 ms ✓ NonlinearSolveBase → NonlinearSolveBaseLinearSolveExt 3024.6 ms ✓ NonlinearSolveBase → NonlinearSolveBaseLineSearchExt 3891.0 ms ✓ NonlinearSolveBase → NonlinearSolveBaseForwardDiffExt 8176.9 ms ✓ BracketingNonlinearSolve 3865.9 ms ✓ DiffEqBase → DiffEqBaseSparseArraysExt 3711.1 ms ✓ DiffEqBase → DiffEqBaseChainRulesCoreExt 4208.6 ms ✓ DiffEqBase → DiffEqBaseForwardDiffExt 5747.7 ms ✓ LSODA 9549.1 ms ✓ OrdinaryDiffEqCore 29353.0 ms ✓ NonlinearSolveQuasiNewton 16813.7 ms ✓ NonlinearSolveSpectralMethods 47205.1 ms ✓ NonlinearSolveFirstOrder 3283.4 ms ✓ BracketingNonlinearSolve → BracketingNonlinearSolveForwardDiffExt 3342.8 ms ✓ OrdinaryDiffEqCore → OrdinaryDiffEqCoreEnzymeCoreExt 7271.2 ms ✓ NonlinearSolveQuasiNewton → NonlinearSolveQuasiNewtonForwardDiffExt 3589.9 ms ✓ NonlinearSolveSpectralMethods → NonlinearSolveSpectralMethodsForwardDiffExt 3200.3 ms ✓ BracketingNonlinearSolve → BracketingNonlinearSolveChainRulesCoreExt 17711.3 ms ✓ SimpleNonlinearSolve 6770.0 ms ✓ OrdinaryDiffEqStabilizedRK 4756.8 ms ✓ OrdinaryDiffEqFunctionMap 60559.9 ms ✓ OrdinaryDiffEqVerner 5479.1 ms ✓ OrdinaryDiffEqQPRK 5783.1 ms ✓ OrdinaryDiffEqSymplecticRK 8576.1 ms ✓ OrdinaryDiffEqLowOrderRK 6004.8 ms ✓ OrdinaryDiffEqFeagin 7593.2 ms ✓ OrdinaryDiffEqSSPRK 6533.3 ms ✓ OrdinaryDiffEqRKN 6551.6 ms ✓ OrdinaryDiffEqHighOrderRK 5545.5 ms ✓ OrdinaryDiffEqExplicitRK 12930.7 ms ✓ OrdinaryDiffEqTsit5 8157.4 ms ✓ OrdinaryDiffEqLinear 6057.9 ms ✓ OrdinaryDiffEqPRK 8648.1 ms ✓ OrdinaryDiffEqLowStorageRK 12382.7 ms ✓ OrdinaryDiffEqDifferentiation 3496.0 ms ✓ SimpleNonlinearSolve → SimpleNonlinearSolveChainRulesCoreExt 6231.3 ms ✓ OrdinaryDiffEqAdamsBashforthMoulton 5046.4 ms ✓ OrdinaryDiffEqNordsieck 7149.9 ms ✓ OrdinaryDiffEqDifferentiation → OrdinaryDiffEqDifferentiationSparseArraysExt 32717.5 ms ✓ NonlinearSolve 12534.0 ms ✓ OrdinaryDiffEqExtrapolation 41538.5 ms ✓ OrdinaryDiffEqRosenbrock 13283.7 ms ✓ OrdinaryDiffEqExponentialRK 14458.9 ms ✓ OrdinaryDiffEqNonlinearSolve 11954.3 ms ✓ OrdinaryDiffEqIMEXMultistep 12175.5 ms ✓ OrdinaryDiffEqStabilizedIRK 13926.2 ms ✓ OrdinaryDiffEqPDIRK 14779.5 ms ✓ OrdinaryDiffEqSDIRK 56743.2 ms ✓ OrdinaryDiffEqFIRK 28852.0 ms ✓ OrdinaryDiffEqBDF 66825.0 ms ✓ OrdinaryDiffEqDefault 19601.1 ms ✓ OrdinaryDiffEq 42914.9 ms ✓ StochasticGene 295 dependencies successfully precompiled in 1685 seconds. 39 already precompiled. 2 dependencies had output during precompilation: ┌ MKL_jll │ Downloading artifact: IntelOpenMP │ Downloading artifact: oneTBB └ ┌ Revise │ ┌ Warning: precompile directive │ │ precompile(Tuple{mbody.sig.parameters[1], Symbol, Bool, Bool, Iterators.Pairs{Symbol, Bool, Tuple{Symbol}, NamedTuple{(:skip_include,), Tuple{Bool}}}, typeof(methods_by_execution!), Compiled, MI, Module, Expr}) │ │ failed. Please report an issue in Revise (after checking for duplicates) or remove this directive. │ └ @ Revise ~/.julia/packages/Revise/nLE4h/src/precompile.jl:65 └ Precompilation completed after 1688.27s ################################################################################ # Testing # Testing StochasticGene Status `/tmp/jl_5hesJJ/Project.toml` [336ed68f] CSV v0.10.15 [a93c6f00] DataFrames v1.8.1 [8bb1440f] DelimitedFiles v1.9.1 [31c24e10] Distributions v0.25.122 [e30172f5] Documenter v1.16.0 [7a1cc6ca] FFTW v1.10.0 [7073ff75] IJulia v1.32.1 ⌅ [682c06a0] JSON v0.21.4 [7f56f5a3] LSODA v0.7.5 [6f286f6a] MultivariateStats v0.10.3 [429524aa] Optim v1.13.2 [1dea7af3] OrdinaryDiffEq v6.103.0 [295af30f] Revise v3.12.1 [10745b16] Statistics v1.11.1 [2913bbd2] StatsBase v0.34.8 [a2598c62] StochasticGene v1.5.10 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [37e2e46d] LinearAlgebra v1.13.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_5hesJJ/Manifest.toml` [47edcb42] ADTypes v1.19.0 [a4c015fc] ANSIColoredPrinters v0.0.1 [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [7d9fca2a] Arpack v0.5.4 [4fba245c] ArrayInterface v7.22.0 [4c555306] ArrayLayouts v1.12.0 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [70df07ce] BracketingNonlinearSolve v1.6.0 [2a0fbf3d] CPUSummary v0.2.7 [336ed68f] CSV v0.10.15 [d360d2e6] ChainRulesCore v1.26.0 [fb6a15b2] CloseOpenIntervals v0.1.13 [da1fd8a2] CodeTracking v2.0.2 [944b1d66] CodecZlib v0.7.8 [38540f10] CommonSolve v0.2.4 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [807dbc54] Compiler v0.1.1 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.3 [8f4d0f93] Conda v1.10.3 [187b0558] ConstructionBase v1.6.0 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 [864edb3b] DataStructures v0.19.3 [e2d170a0] DataValueInterfaces v1.0.0 [8bb1440f] DelimitedFiles v1.9.1 [2b5f629d] DiffEqBase v6.191.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.12 [31c24e10] Distributions v0.25.122 [ffbed154] DocStringExtensions v0.9.5 [e30172f5] Documenter v1.16.0 [4e289a0a] EnumX v1.0.5 [f151be2c] EnzymeCore v0.8.17 [d4d017d3] ExponentialUtilities v1.28.0 [e2ba6199] ExprTools v0.1.10 [55351af7] ExproniconLite v0.10.14 [7a1cc6ca] FFTW v1.10.0 [7034ab61] FastBroadcast v0.3.5 [9aa1b823] FastClosures v0.3.2 [442a2c76] FastGaussQuadrature v1.1.0 [a4df4552] FastPower v1.2.0 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.15.0 [6a86dc24] FiniteDiff v2.29.0 [f6369f11] ForwardDiff v1.3.0 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v0.1.3 [46192b85] GPUArraysCore v0.2.0 [c145ed77] GenericSchur v0.5.6 [d7ba0133] Git v1.5.0 [34004b35] 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Testing Running tests... Sampling StochasticGene: Test Failed at /home/pkgeval/.julia/packages/StochasticGene/iWmSF/test/runtests.jl:20 Expression: isapprox(h1, h2, rtol = 0.05) Evaluated: isapprox([0.41208720996962606, 0.2727032333221745, 2.6521761459293387, 1.0], [0.33, 0.19, 2.5, 1.0]; rtol = 0.05) Stacktrace: [1] top-level scope @ ~/.julia/packages/StochasticGene/iWmSF/test/runtests.jl:13 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [3] macro expansion @ ~/.julia/packages/StochasticGene/iWmSF/test/runtests.jl:20 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:753 [inlined] Histogram count: 6774.0 Sampling Sampling Sampling StochasticGene: Test Failed at /home/pkgeval/.julia/packages/StochasticGene/iWmSF/test/runtests.jl:29 Expression: isapprox(h1, h2, rtol = 0.2) Evaluated: isapprox([4.862422219678972e-32, 2.5198212257019693e-30, 6.465057988869719e-29, 1.1076324519270173e-27, 1.43494115166302e-26, 1.5042673014004462e-25, 1.3312719400954764e-24, 1.0237277874886043e-23, 6.984348574604692e-23, 4.29456102003804e-22 … 0.0046575220014474505, 0.004653923017950593, 0.004650326814350205, 0.004646733388425784, 0.004643142737942873, 0.00463955486068252, 0.00463596975441182, 0.004632387416909494, 0.004628807845938761, 0.004625231039282995], [3.4961032563262367e-6, 7.051048416803784e-7, 1.4892443288650315e-6, 1.1921415776154145e-7, 2.359172213612324e-6, 3.955474384703897e-7, 1.516277284985444e-6, 1.3535632755211853e-7, 6.467153446068824e-8, 3.856566304964424e-8 … 0.003446009152276692, 0.0034738199378049704, 0.0034333678861274745, 0.003402186096292738, 0.0033533065338490968, 0.0033946013366032077, 0.0034653924270388256, 0.0032336358809698378, 0.003380274568300761, 0.0033676333021515435]; rtol = 0.2) Stacktrace: [1] top-level scope @ ~/.julia/packages/StochasticGene/iWmSF/test/runtests.jl:13 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [3] macro expansion @ ~/.julia/packages/StochasticGene/iWmSF/test/runtests.jl:29 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:753 [inlined] No rate file, set rate to prior initial: [0.01, 0.01, 0.1, 0.12, 0.12, 1.0, 0.0, 0.1, 1.0, 0.1] ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 1480 running 1 of 1 signal (10): User defined signal 1 _ZN4llvm14FoldingSetBase19FindNodeOrInsertPosERKNS_16FoldingSetNodeIDERPvRKNS0_14FoldingSetInfoE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm15ScalarEvolution23findExistingSCEVInCacheENS_9SCEVTypesENS_8ArrayRefIPKNS_4SCEVEEE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm15ScalarEvolution10getAddExprERNS_15SmallVectorImplIPKNS_4SCEVEEENS2_11NoWrapFlagsEj at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm18SCEVRewriteVisitorIN12_GLOBAL__N_116SCEVInitRewriterEE5visitEPKNS_4SCEVE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm15ScalarEvolution23SplitIntoInitAndPostIncEPKNS_4LoopEPKNS_4SCEVE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm15ScalarEvolution19isKnownViaInductionENS_12CmpPredicateEPKNS_4SCEVES4_ at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm15ScalarEvolution16isKnownPredicateENS_12CmpPredicateEPKNS_4SCEVES4_ at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm15ScalarEvolution17evaluatePredicateENS_12CmpPredicateEPKNS_4SCEVES4_ at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZNSt17_Function_handlerIFvPN4llvm5ValueEjEZL24countToEliminateComparesRNS0_4LoopEjRNS0_15ScalarEvolutionEEUlS2_jE0_E9_M_invokeERKSt9_Any_dataOS2_Oj at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZNSt17_Function_handlerIFvPN4llvm5ValueEjEZL24countToEliminateComparesRNS0_4LoopEjRNS0_15ScalarEvolutionEEUlS2_jE0_E9_M_invokeERKSt9_Any_dataOS2_Oj at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm16computePeelCountEPNS_4LoopEjRNS_19TargetTransformInfo18PeelingPreferencesEjRNS_13DominatorTreeERNS_15ScalarEvolutionEPNS_15AssumptionCacheEj at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm18computeUnrollCountEPNS_4LoopERKNS_19TargetTransformInfoERNS_13DominatorTreeEPNS_8LoopInfoEPNS_15AssumptionCacheERNS_15ScalarEvolutionERKNS_15SmallPtrSetImplIPKNS_5ValueEEEPNS_25OptimizationRemarkEmitterEjjbjRKNS_19UnrollCostEstimatorERNS2_20UnrollingPreferencesERNS2_18PeelingPreferencesERb at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZL15tryToUnrollLoopPN4llvm4LoopERNS_13DominatorTreeEPNS_8LoopInfoERNS_15ScalarEvolutionERKNS_19TargetTransformInfoERNS_15AssumptionCacheERNS_25OptimizationRemarkEmitterEPNS_18BlockFrequencyInfoEPNS_18ProfileSummaryInfoEbibbbSt8optionalIjESK_SJ_IbESL_SL_SL_SL_SK_PNS_9AAResultsE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm14LoopUnrollPass3runERNS_8FunctionERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:91 _ZN4llvm11PassManagerINS_8FunctionENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:91 _ZN4llvm27ModuleToFunctionPassAdaptor3runERNS_6ModuleERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:91 _ZN4llvm11PassManagerINS_6ModuleENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/src/pipeline.cpp:787 operator() at /source/src/jitlayers.cpp:1508 withModuleDo<(anonymous namespace)::sizedOptimizerT::operator()(llvm::orc::ThreadSafeModule) [with long unsigned int N = 4]:: > at /source/usr/include/llvm/ExecutionEngine/Orc/ThreadSafeModule.h:136 [inlined] operator() at /source/src/jitlayers.cpp:1469 [inlined] operator() at /source/src/jitlayers.cpp:1644 [inlined] addModule at /source/src/jitlayers.cpp:2101 jl_compile_codeinst_now at /source/src/jitlayers.cpp:682 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:876 jl_compile_method_internal at /source/src/gf.c:3648 _jl_invoke at /source/src/gf.c:4108 [inlined] ijl_apply_generic at /source/src/gf.c:4313 #solve_up#30 at /home/pkgeval/.julia/packages/DiffEqBase/aB45d/src/solve.jl:563 solve_up at /home/pkgeval/.julia/packages/DiffEqBase/aB45d/src/solve.jl:540 [inlined] #solve#29 at /home/pkgeval/.julia/packages/DiffEqBase/aB45d/src/solve.jl:530 solve at /home/pkgeval/.julia/packages/DiffEqBase/aB45d/src/solve.jl:520 unknown function (ip: 0x7ed1fdd13346) at (unknown file) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 kolmogorov_forward at /home/pkgeval/.julia/packages/StochasticGene/iWmSF/src/hmm.jl:81 kolmogorov_forward at /home/pkgeval/.julia/packages/StochasticGene/iWmSF/src/hmm.jl:79 [inlined] make_ap at /home/pkgeval/.julia/packages/StochasticGene/iWmSF/src/hmm.jl:457 [inlined] ll_hmm at /home/pkgeval/.julia/packages/StochasticGene/iWmSF/src/hmm.jl:1831 unknown function (ip: 0x7ed1fdd0734e) at (unknown file) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 ll_hmm_trace at /home/pkgeval/.julia/packages/StochasticGene/iWmSF/src/likelihoods.jl:486 loglikelihood at /home/pkgeval/.julia/packages/StochasticGene/iWmSF/src/likelihoods.jl:491 unknown function (ip: 0x7ed1fdd050c6) at (unknown file) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 metropolis_hastings at /home/pkgeval/.julia/packages/StochasticGene/iWmSF/src/metropolis_hastings.jl:298 run_mh at /home/pkgeval/.julia/packages/StochasticGene/iWmSF/src/metropolis_hastings.jl:128 [inlined] run_mh at /home/pkgeval/.julia/packages/StochasticGene/iWmSF/src/metropolis_hastings.jl:151 #test_fit_trace#191 at /home/pkgeval/.julia/packages/StochasticGene/iWmSF/src/test.jl:282 test_fit_trace at /home/pkgeval/.julia/packages/StochasticGene/iWmSF/src/test.jl:262 unknown function (ip: 0x7ed1fe1ef70f) at (unknown file) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2284 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:679 eval_body at /source/src/interpreter.c:550 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 jl_toplevel_eval_flex at /source/src/toplevel.c:742 jl_eval_toplevel_stmts at /source/src/toplevel.c:585 jl_toplevel_eval_flex at /source/src/toplevel.c:683 ijl_toplevel_eval at /source/src/toplevel.c:754 ijl_toplevel_eval_in at /source/src/toplevel.c:799 eval at ./boot.jl:489 include_string at ./loading.jl:3000 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 _include at ./loading.jl:3060 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_44862.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2284 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:679 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 jl_toplevel_eval_flex at /source/src/toplevel.c:742 jl_eval_toplevel_stmts at /source/src/toplevel.c:585 jl_toplevel_eval_flex at /source/src/toplevel.c:683 ijl_toplevel_eval at /source/src/toplevel.c:754 ijl_toplevel_eval_in at /source/src/toplevel.c:799 eval at ./boot.jl:489 exec_options at ./client.jl:310 _start at ./client.jl:577 jfptr__start_69940.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2284 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7ed2521f5249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== Sampling ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1246 wait_forever at ./task.jl:1168 jfptr_wait_forever_41114.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2284 [inlined] start_task at /source/src/task.c:1272 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.14/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x0000761573f01960 Total snapshots: 457. Utilization: 0% ╎457 @Base/task.jl:1168 wait_forever() 456╎ 457 @Base/task.jl:1246 wait() [1480] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/StochasticGene/iWmSF/test/runtests.jl:11 iterate at ./range.jl:925 [inlined] iterate at ./indices.jl:399 [inlined] macro expansion at ./cartesian.jl:67 [inlined] _unsafe_getindex! at ./multidimensional.jl:1007 [inlined] _unsafe_getindex at ./multidimensional.jl:998 [inlined] _getindex at ./multidimensional.jl:984 [inlined] getindex at ./abstractarray.jl:1360 [inlined] forward at /home/pkgeval/.julia/packages/StochasticGene/iWmSF/src/hmm.jl:973 forward at /home/pkgeval/.julia/packages/StochasticGene/iWmSF/src/hmm.jl:1059 [inlined] _ll_hmm at /home/pkgeval/.julia/packages/StochasticGene/iWmSF/src/hmm.jl:1647 unknown function (ip: 0x7ed1fdd5210c) at (unknown file) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 ll_hmm at /home/pkgeval/.julia/packages/StochasticGene/iWmSF/src/hmm.jl:1832 unknown function (ip: 0x7ed1fdd0734e) at (unknown file) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 ll_hmm_trace at /home/pkgeval/.julia/packages/StochasticGene/iWmSF/src/likelihoods.jl:486 loglikelihood at /home/pkgeval/.julia/packages/StochasticGene/iWmSF/src/likelihoods.jl:491 [inlined] mhstep at /home/pkgeval/.julia/packages/StochasticGene/iWmSF/src/metropolis_hastings.jl:552 unknown function (ip: 0x7ed1fdd8d0f9) at (unknown file) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 sample at /home/pkgeval/.julia/packages/StochasticGene/iWmSF/src/metropolis_hastings.jl:459 sample at /home/pkgeval/.julia/packages/StochasticGene/iWmSF/src/metropolis_hastings.jl:450 unknown function (ip: 0x7ed1fdd8c3cc) at (unknown file) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 metropolis_hastings at /home/pkgeval/.julia/packages/StochasticGene/iWmSF/src/metropolis_hastings.jl:313 run_mh at /home/pkgeval/.julia/packages/StochasticGene/iWmSF/src/metropolis_hastings.jl:128 [inlined] run_mh at /home/pkgeval/.julia/packages/StochasticGene/iWmSF/src/metropolis_hastings.jl:151 #test_fit_trace#191 at /home/pkgeval/.julia/packages/StochasticGene/iWmSF/src/test.jl:282 test_fit_trace at /home/pkgeval/.julia/packages/StochasticGene/iWmSF/src/test.jl:262 unknown function (ip: 0x7ed1fe1ef70f) at (unknown file) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2284 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:679 eval_body at /source/src/interpreter.c:550 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 jl_toplevel_eval_flex at /source/src/toplevel.c:742 jl_eval_toplevel_stmts at /source/src/toplevel.c:585 jl_toplevel_eval_flex at /source/src/toplevel.c:683 ijl_toplevel_eval at /source/src/toplevel.c:754 ijl_toplevel_eval_in at /source/src/toplevel.c:799 eval at ./boot.jl:489 include_string at ./loading.jl:3000 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 _include at ./loading.jl:3060 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_44862.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2284 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:679 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 jl_toplevel_eval_flex at /source/src/toplevel.c:742 jl_eval_toplevel_stmts at /source/src/toplevel.c:585 jl_toplevel_eval_flex at /source/src/toplevel.c:683 ijl_toplevel_eval at /source/src/toplevel.c:754 ijl_toplevel_eval_in at /source/src/toplevel.c:799 eval at ./boot.jl:489 exec_options at ./client.jl:310 _start at ./client.jl:577 jfptr__start_69940.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2284 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7ed2521f5249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) Allocations: 3511204529 (Pool: 3511203328; Big: 1201); GC: 5628 PkgEval terminated after 2721.35s: test duration exceeded the time limit