Package evaluation to test GaussianVariationalInference on Julia 1.14.0-DEV.1260 (89243d1cdf*) started at 2025-11-16T22:25:32.249 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 10.03s ################################################################################ # Installation # Installing GaussianVariationalInference... Resolving package versions... Installed DefineSingletons ───────────── v0.1.2 Installed CompositionsBase ───────────── v0.1.2 Installed DiffResults ────────────────── v1.1.0 Installed MicroCollections ───────────── v0.2.0 Installed MacroTools ─────────────────── v0.5.16 Installed LLVMExtra_jll ──────────────── v0.0.38+0 Installed ForwardDiff ────────────────── v0.10.39 Installed DataStructures ─────────────── v0.19.3 Installed Rmath_jll ──────────────────── v0.5.1+0 Installed Adapt ──────────────────────── v4.4.0 Installed ConstructionBase ───────────── v1.6.0 Installed FillArrays ─────────────────── v1.15.0 Installed HypergeometricFunctions ────── v0.3.28 Installed AliasTables ────────────────── v1.1.3 Installed StatsBase ──────────────────── v0.34.8 Installed SparseInverseSubset ────────── v0.1.2 Installed HashArrayMappedTries ───────── v0.2.0 Installed OrderedCollections ─────────── v1.8.1 Installed Compat ─────────────────────── v4.18.1 Installed ArrayInterface ─────────────── v7.22.0 Installed Optim ──────────────────────── v1.13.2 Installed Zygote ─────────────────────── v0.6.77 Installed IteratorInterfaceExtensions ── v1.0.0 Installed DataAPI ────────────────────── v1.16.0 Installed PositiveFactorizations ─────── v0.2.4 Installed StatsAPI ───────────────────── v1.7.1 Installed Statistics ─────────────────── v1.11.1 Installed InitialValues ──────────────── v0.3.1 Installed StructArrays ───────────────── v0.7.2 Installed GPUArrays ──────────────────── v11.2.6 Installed PrecompileTools ────────────── v1.3.3 Installed ChainRules ─────────────────── v1.72.6 Installed CEnum ──────────────────────── v0.5.0 Installed ArgCheck ───────────────────── v2.5.0 Installed CommonSubexpressions ───────── v0.3.1 Installed Atomix ─────────────────────── v1.1.2 Installed DataValueInterfaces ────────── v1.0.0 Installed RealDot ────────────────────── v0.1.0 Installed StaticArraysCore ───────────── v1.4.4 Installed StaticArrays ───────────────── v1.9.15 Installed IrrationalConstants ────────── v0.2.6 Installed GPUArraysCore ──────────────── v0.2.0 Installed AbstractFFTs ───────────────── v1.5.0 Installed BangBang ───────────────────── v0.4.6 Installed QuadGK ─────────────────────── v2.11.2 Installed ChainRulesCore ─────────────── v1.26.0 Installed ReverseDiff ────────────────── v1.16.1 Installed NaNMath ────────────────────── v1.1.3 Installed OpenSpecFun_jll ────────────── v0.5.6+0 Installed FunctionWrappers ───────────── v1.1.3 Installed Requires ───────────────────── v1.3.1 Installed LLVM ───────────────────────── v9.4.4 Installed LogExpFunctions ────────────── v0.3.29 Installed DiffRules ──────────────────── v1.15.1 Installed Rmath ──────────────────────── v0.9.0 Installed ScopedValues ───────────────── v1.5.0 Installed FiniteDiff ─────────────────── v2.29.0 Installed KernelAbstractions ─────────── v0.9.39 Installed Parameters ─────────────────── v0.12.3 Installed SplittablesBase ────────────── v0.1.15 Installed UnsafeAtomics ──────────────── v0.3.0 Installed Distributions ──────────────── v0.25.122 Installed StatsFuns ──────────────────── v1.5.2 Installed PtrArrays ──────────────────── v1.3.0 Installed Tables ─────────────────────── v1.12.1 Installed EnumX ──────────────────────── v1.0.5 Installed Transducers ────────────────── v0.4.85 Installed IRTools ────────────────────── v0.4.15 Installed NLSolversBase ──────────────── v7.10.0 Installed InverseFunctions ───────────── v0.1.17 Installed Reexport ───────────────────── v1.2.2 Installed Missings ───────────────────── v1.2.0 Installed SpecialFunctions ───────────── v2.6.1 Installed Setfield ───────────────────── v1.1.2 Installed Preferences ────────────────── v1.5.0 Installed Baselet ────────────────────── v0.1.1 Installed ZygoteRules ────────────────── v0.2.7 Installed JLLWrappers ────────────────── v1.7.1 Installed TableTraits ────────────────── v1.0.1 Installed LineSearches ───────────────── v7.4.0 Installed PDMats ─────────────────────── v0.11.36 Installed SortingAlgorithms ──────────── v1.2.2 Installed Crayons ────────────────────── v4.1.1 Installed UnPack ─────────────────────── v1.0.2 Installed ADTypes ────────────────────── v1.19.0 Installed DocStringExtensions ────────── v0.9.5 Installed GaussianVariationalInference ─ v0.2.3 Installed Accessors ──────────────────── v0.1.42 Installed DifferentiationInterface ───── v0.7.11 Installing 3 artifacts Installed artifact Rmath 121.9 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact LLVMExtra 3.2 MiB Updating `~/.julia/environments/v1.14/Project.toml` [f96f1e2a] + GaussianVariationalInference v0.2.3 Updating `~/.julia/environments/v1.14/Manifest.toml` [47edcb42] + ADTypes v1.19.0 [621f4979] + AbstractFFTs v1.5.0 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [4fba245c] + ArrayInterface v7.22.0 [a9b6321e] + Atomix v1.1.2 [198e06fe] + BangBang v0.4.6 [9718e550] + Baselet v0.1.1 [fa961155] + CEnum v0.5.0 [082447d4] + ChainRules v1.72.6 [d360d2e6] + ChainRulesCore v1.26.0 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.6.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [244e2a9f] + DefineSingletons v0.1.2 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.11 [31c24e10] + Distributions v0.25.122 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.5 [1a297f60] + FillArrays v1.15.0 [6a86dc24] + FiniteDiff v2.29.0 ⌅ [f6369f11] + ForwardDiff v0.10.39 [069b7b12] + FunctionWrappers v1.1.3 [0c68f7d7] + GPUArrays v11.2.6 [46192b85] + GPUArraysCore v0.2.0 [f96f1e2a] + GaussianVariationalInference v0.2.3 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 [7869d1d1] + IRTools v0.4.15 [22cec73e] + InitialValues v0.3.1 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [63c18a36] + KernelAbstractions v0.9.39 [929cbde3] + LLVM v9.4.4 [d3d80556] + LineSearches v7.4.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [128add7d] + MicroCollections v0.2.0 [e1d29d7a] + Missings v1.2.0 [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.3 [429524aa] + Optim v1.13.2 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.36 [d96e819e] + Parameters v0.12.3 [85a6dd25] + PositiveFactorizations v0.2.4 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [c1ae055f] + RealDot v0.1.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [37e2e3b7] + ReverseDiff v1.16.1 [79098fc4] + Rmath v0.9.0 [7e506255] + ScopedValues v1.5.0 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.2 [dc90abb0] + SparseInverseSubset v0.1.2 [276daf66] + SpecialFunctions v2.6.1 [171d559e] + SplittablesBase v0.1.15 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.8 [4c63d2b9] + StatsFuns v1.5.2 [09ab397b] + StructArrays v0.7.2 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [28d57a85] + Transducers v0.4.85 [3a884ed6] + UnPack v1.0.2 [013be700] + UnsafeAtomics v0.3.0 ⌅ [e88e6eb3] + Zygote v0.6.77 [700de1a5] + ZygoteRules v0.2.7 [dad2f222] + LLVMExtra_jll v0.0.38+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.16.0+0 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.68.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 12.17s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... WARNING: Imported binding Operations.project_rel_path was undeclared at import time during import to TestEnv. 4692.3 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. 1 dependency had output during precompilation: ┌ TestEnv │ WARNING: Imported binding Operations.project_rel_path was undeclared at import time during import to TestEnv. └ ┌ Error: Failed to use TestEnv.jl; test dependencies will not be precompiled │ exception = │ UndefVarError: `project_rel_path` not defined in `TestEnv` │ Suggestion: this global was defined as `Pkg.Operations.project_rel_path` but not assigned a value. │ Stacktrace: │ [1] get_test_dir(ctx::Pkg.Types.Context, pkgspec::PackageSpec) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:75 │ [2] test_dir_has_project_file │ @ ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:52 [inlined] │ [3] maybe_gen_project_override! │ @ ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:83 [inlined] │ [4] activate(pkg::String; allow_reresolve::Bool) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/activate_set.jl:12 │ [5] activate(pkg::String) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/activate_set.jl:9 │ [6] top-level scope │ @ /PkgEval.jl/scripts/precompile.jl:24 │ [7] include(mod::Module, _path::String) │ @ Base ./Base.jl:309 │ [8] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:344 │ [9] _start() │ @ Base ./client.jl:577 └ @ Main /PkgEval.jl/scripts/precompile.jl:26 Precompiling package dependencies... Precompiling packages... 4371.8 ms ✓ MacroTools 787.6 ms ✓ Reexport 1132.0 ms ✓ ConstructionBase 2162.9 ms ✓ IrrationalConstants 978.6 ms ✓ DataValueInterfaces 867.2 ms ✓ StatsAPI 864.0 ms ✓ CEnum 921.3 ms ✓ ArgCheck 2284.7 ms ✓ Baselet 1129.8 ms ✓ Statistics 980.0 ms ✓ StaticArraysCore 855.5 ms ✓ PtrArrays 1358.2 ms ✓ PositiveFactorizations 1167.6 ms ✓ DataAPI 897.6 ms ✓ RealDot 3653.3 ms ✓ UnsafeAtomics 1022.4 ms ✓ InverseFunctions 906.1 ms ✓ CompositionsBase 1577.3 ms ✓ InitialValues 1086.5 ms ✓ AbstractFFTs 939.6 ms ✓ EnumX 2416.3 ms ✓ FillArrays 820.7 ms ✓ UnPack 1279.5 ms ✓ OrderedCollections 1467.9 ms ✓ FunctionWrappers 925.9 ms ✓ HashArrayMappedTries 1386.8 ms ✓ ADTypes 1121.4 ms ✓ DocStringExtensions 853.9 ms ✓ DefineSingletons 801.5 ms ✓ IteratorInterfaceExtensions 1820.5 ms ✓ Crayons 1058.6 ms ✓ NaNMath 1334.2 ms ✓ Requires 1255.4 ms ✓ SuiteSparse 1174.8 ms ✓ Compat 1160.0 ms ✓ Preferences 1812.3 ms ✓ CommonSubexpressions 4286.2 ms ✓ IRTools 811.1 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 1299.8 ms ✓ Statistics → SparseArraysExt 881.3 ms ✓ DiffResults 991.6 ms ✓ AliasTables 1024.4 ms ✓ Missings 1502.7 ms ✓ Atomix 1071.5 ms ✓ InverseFunctions → InverseFunctionsDatesExt 2367.0 ms ✓ InverseFunctions → InverseFunctionsTestExt 913.4 ms ✓ CompositionsBase → CompositionsBaseInverseFunctionsExt 4093.6 ms ✓ AbstractFFTs → AbstractFFTsTestExt 1529.8 ms ✓ FillArrays → FillArraysSparseArraysExt 981.5 ms ✓ FillArrays → FillArraysStatisticsExt 958.9 ms ✓ Parameters 3576.3 ms ✓ DataStructures 900.6 ms ✓ ScopedValues 770.3 ms ✓ ADTypes → ADTypesConstructionBaseExt 1857.1 ms ✓ DifferentiationInterface 1473.2 ms ✓ LogExpFunctions 775.6 ms ✓ TableTraits 947.5 ms ✓ Adapt 1828.4 ms ✓ PDMats 1311.9 ms ✓ SparseInverseSubset 825.6 ms ✓ Compat → CompatLinearAlgebraExt 964.9 ms ✓ PrecompileTools 1206.6 ms ✓ JLLWrappers 3079.1 ms ✓ Setfield 5094.1 ms ✓ Accessors 1062.2 ms ✓ SortingAlgorithms 2323.4 ms ✓ QuadGK 1321.3 ms ✓ DifferentiationInterface → DifferentiationInterfaceSparseArraysExt 804.3 ms ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt 1768.5 ms ✓ Tables 1144.4 ms ✓ ArrayInterface 1274.6 ms ✓ Adapt → AdaptSparseArraysExt 1191.2 ms ✓ GPUArraysCore 1447.0 ms ✓ FillArrays → FillArraysPDMatsExt 2725.1 ms ✓ ChainRulesCore 13709.6 ms ✓ StaticArrays 1384.2 ms ✓ Rmath_jll 1435.7 ms ✓ OpenSpecFun_jll 5403.4 ms ✓ LLVMExtra_jll 3563.8 ms ✓ SplittablesBase 1753.0 ms ✓ Accessors → TestExt 2516.0 ms ✓ Accessors → LinearAlgebraExt 4547.3 ms ✓ StatsBase 1554.5 ms ✓ StructArrays 782.7 ms ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 1286.7 ms ✓ ArrayInterface → ArrayInterfaceSparseArraysExt 812.1 ms ✓ DifferentiationInterface → DifferentiationInterfaceGPUArraysCoreExt 826.1 ms ✓ ArrayInterface → ArrayInterfaceGPUArraysCoreExt 1331.3 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 2426.7 ms ✓ ZygoteRules 919.6 ms ✓ AbstractFFTs → AbstractFFTsChainRulesCoreExt 821.9 ms ✓ ADTypes → ADTypesChainRulesCoreExt 899.7 ms ✓ DifferentiationInterface → DifferentiationInterfaceChainRulesCoreExt 3128.4 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 880.4 ms ✓ ArrayInterface → ArrayInterfaceChainRulesCoreExt 1414.2 ms ✓ StaticArrays → StaticArraysStatisticsExt 1511.3 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 1436.4 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 1453.5 ms ✓ DifferentiationInterface → DifferentiationInterfaceStaticArraysExt 1384.2 ms ✓ Adapt → AdaptStaticArraysExt 1547.0 ms ✓ Accessors → StaticArraysExt 1498.5 ms ✓ Rmath 5060.4 ms ✓ SpecialFunctions 14534.0 ms ✓ LLVM 1609.8 ms ✓ BangBang 1419.0 ms ✓ PDMats → StatsBaseExt 1300.5 ms ✓ StructArrays → StructArraysSparseArraysExt 835.7 ms ✓ StructArrays → StructArraysLinearAlgebraExt 807.7 ms ✓ StructArrays → StructArraysAdaptExt 1553.4 ms ✓ StructArrays → StructArraysStaticArraysExt 996.9 ms ✓ Accessors → StructArraysExt 1320.7 ms ✓ FiniteDiff 8467.3 ms ✓ KernelAbstractions 3919.9 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 2454.8 ms ✓ HypergeometricFunctions 1277.0 ms ✓ DiffRules 5700.1 ms ✓ UnsafeAtomics → UnsafeAtomicsLLVM 1127.8 ms ✓ BangBang → BangBangChainRulesCoreExt 1125.4 ms ✓ BangBang → BangBangTablesExt 1113.2 ms ✓ BangBang → BangBangStructArraysExt 1611.4 ms ✓ BangBang → BangBangStaticArraysExt 2698.4 ms ✓ MicroCollections 12274.9 ms ✓ ChainRules 1441.4 ms ✓ FiniteDiff → FiniteDiffStaticArraysExt 1287.0 ms ✓ FiniteDiff → FiniteDiffSparseArraysExt 989.3 ms ✓ DifferentiationInterface → DifferentiationInterfaceFiniteDiffExt 2915.7 ms ✓ KernelAbstractions → SparseArraysExt 2005.9 ms ✓ KernelAbstractions → LinearAlgebraExt 2050.7 ms ✓ StructArrays → StructArraysGPUArraysCoreExt 2863.5 ms ✓ StatsFuns 8042.0 ms ✓ ForwardDiff 7480.3 ms ✓ Transducers 1544.3 ms ✓ ArrayInterface → ArrayInterfaceChainRulesExt 13107.9 ms ✓ GPUArrays 3441.5 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 1004.6 ms ✓ StatsFuns → StatsFunsInverseFunctionsExt 9153.4 ms ✓ Distributions 2543.0 ms ✓ ForwardDiff → ForwardDiffStaticArraysExt 2253.5 ms ✓ DifferentiationInterface → DifferentiationInterfaceForwardDiffExt 1870.7 ms ✓ Transducers → TransducersAdaptExt 3501.0 ms ✓ Distributions → DistributionsTestExt 3001.1 ms ✓ Distributions → DistributionsChainRulesCoreExt 43845.6 ms ✓ ReverseDiff ERROR: LoadError: ParseError: # Error @ /home/pkgeval/.julia/packages/Zygote/zowwZ/src/lib/array.jl:620:19  # to create a Diagonal  tr(x), function (Δ::Number) # └─────────┘ ── Invalid signature in function definition Stacktrace:  [1] top-level scope  @ ~/.julia/packages/Zygote/zowwZ/src/lib/array.jl:620  [2] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:310  [3] top-level scope  @ ~/.julia/packages/Zygote/zowwZ/src/Zygote.jl:39  [4] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [5] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3147  [6] top-level scope  @ stdin:5  [7] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2993  [9] include_string  @ ./loading.jl:3003 [inlined]  [10] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [11] _start()  @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/Zygote/zowwZ/src/lib/array.jl:620 in expression starting at /home/pkgeval/.julia/packages/Zygote/zowwZ/src/Zygote.jl:1 in expression starting at stdin:5 Precompilation completed after 396.69s ################################################################################ # Testing # Testing GaussianVariationalInference Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function. Updating `/tmp/jl_jFTEnY/Project.toml` [31c24e10] ↑ Distributions v0.25.78 ⇒ v0.25.122 [f96f1e2a] + GaussianVariationalInference v0.2.3 [37e2e46d] ~ LinearAlgebra ⇒ v1.13.0 [8dfed614] ~ Test ⇒ v1.11.0 Updating `/tmp/jl_jFTEnY/Manifest.toml` [47edcb42] + ADTypes v1.19.0 [621f4979] + AbstractFFTs v1.5.0 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [4fba245c] + ArrayInterface v7.22.0 [a9b6321e] + Atomix v1.1.2 [198e06fe] + BangBang v0.4.6 [9718e550] + Baselet v0.1.1 [fa961155] + CEnum v0.5.0 [49dc2e85] - Calculus v0.5.1 [082447d4] + ChainRules v1.72.6 [d360d2e6] ↑ ChainRulesCore v1.15.6 ⇒ v1.26.0 [9e997f8a] - ChangesOfVariables v0.1.4 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] ↑ Compat v4.4.0 ⇒ v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.6.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] ↑ DataAPI v1.13.0 ⇒ v1.16.0 [864edb3b] ↑ DataStructures v0.18.13 ⇒ v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [244e2a9f] + DefineSingletons v0.1.2 [b429d917] - DensityInterface v0.4.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.11 [31c24e10] ↑ Distributions v0.25.78 ⇒ v0.25.122 [ffbed154] ↑ DocStringExtensions v0.9.2 ⇒ v0.9.5 [fa6b7ba4] - DualNumbers v0.6.8 [4e289a0a] + EnumX v1.0.5 [1a297f60] ↑ FillArrays v0.13.5 ⇒ v1.15.0 [6a86dc24] + FiniteDiff v2.29.0 ⌅ [f6369f11] + ForwardDiff v0.10.39 [069b7b12] + FunctionWrappers v1.1.3 [0c68f7d7] + GPUArrays v11.2.6 [46192b85] + GPUArraysCore v0.2.0 [f96f1e2a] + GaussianVariationalInference v0.2.3 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] ↑ HypergeometricFunctions v0.3.11 ⇒ v0.3.28 [7869d1d1] + IRTools v0.4.15 [22cec73e] + InitialValues v0.3.1 [3587e190] ↑ InverseFunctions v0.1.8 ⇒ v0.1.17 [92d709cd] ↑ IrrationalConstants v0.1.1 ⇒ v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] ↑ JLLWrappers v1.4.1 ⇒ v1.7.1 [63c18a36] + KernelAbstractions v0.9.39 [929cbde3] + LLVM v9.4.4 [d3d80556] + LineSearches v7.4.0 [2ab3a3ac] ↑ LogExpFunctions v0.3.18 ⇒ v0.3.29 [1914dd2f] + MacroTools v0.5.16 [128add7d] + MicroCollections v0.2.0 [e1d29d7a] ↑ Missings v1.0.2 ⇒ v1.2.0 [d41bc354] + NLSolversBase v7.10.0 [77ba4419] ↑ NaNMath v1.0.1 ⇒ v1.1.3 [429524aa] + Optim v1.13.2 [bac558e1] ↑ OrderedCollections v1.4.1 ⇒ v1.8.1 [90014a1f] ↑ PDMats v0.11.16 ⇒ v0.11.36 [d96e819e] + Parameters v0.12.3 [85a6dd25] + PositiveFactorizations v0.2.4 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] ↑ Preferences v1.3.0 ⇒ v1.5.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] ↑ QuadGK v2.6.0 ⇒ v2.11.2 [c1ae055f] + RealDot v0.1.0 [ae029012] + Requires v1.3.1 [37e2e3b7] + ReverseDiff v1.16.1 [79098fc4] ↑ Rmath v0.7.0 ⇒ v0.9.0 [7e506255] + ScopedValues v1.5.0 [efcf1570] + Setfield v1.1.2 [a2af1166] ↑ SortingAlgorithms v1.1.0 ⇒ v1.2.2 [dc90abb0] + SparseInverseSubset v0.1.2 [276daf66] ↑ SpecialFunctions v2.1.7 ⇒ v2.6.1 [171d559e] + SplittablesBase v0.1.15 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] ↑ StatsAPI v1.5.0 ⇒ v1.7.1 [2913bbd2] ↑ StatsBase v0.33.21 ⇒ v0.34.8 [4c63d2b9] ↑ StatsFuns v1.0.1 ⇒ v1.5.2 [09ab397b] + StructArrays v0.7.2 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [28d57a85] + Transducers v0.4.85 [3a884ed6] + UnPack v1.0.2 [013be700] + UnsafeAtomics v0.3.0 ⌅ [e88e6eb3] + Zygote v0.6.77 [700de1a5] + ZygoteRules v0.2.7 [dad2f222] + LLVMExtra_jll v0.0.38+0 [c8ffd9c3] - MbedTLS_jll v2.28.0+0 [efe28fd5] ↑ OpenSpecFun_jll v0.5.5+0 ⇒ v0.5.6+0 [f50d1b31] ↑ Rmath_jll v0.3.0+0 ⇒ v0.5.1+0 [0dad84c5] ↑ ArgTools v1.1.1 ⇒ v1.1.2 [56f22d72] ~ Artifacts ⇒ v1.11.0 [2a0f44e3] ~ Base64 ⇒ v1.11.0 [ade2ca70] ~ Dates ⇒ v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] ↑ Downloads v1.6.0 ⇒ v1.7.0 [7b1f6079] ~ FileWatching ⇒ v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] ~ InteractiveUtils ⇒ v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] ↑ LibCURL v0.6.3 ⇒ v1.0.0 [76f85450] ~ LibGit2 ⇒ v1.11.0 [8f399da3] ~ Libdl ⇒ v1.11.0 [37e2e46d] ~ LinearAlgebra ⇒ v1.13.0 [56ddb016] ~ Logging ⇒ v1.11.0 [d6f4376e] ~ Markdown ⇒ v1.11.0 [ca575930] ↑ NetworkOptions v1.2.0 ⇒ v1.3.0 [44cfe95a] ↑ Pkg v1.8.0 ⇒ v1.13.0 [de0858da] ~ Printf ⇒ v1.11.0 [3fa0cd96] - REPL [9a3f8284] ~ Random ⇒ v1.11.0 [ea8e919c] ↑ SHA v0.7.0 ⇒ v1.0.0 [9e88b42a] ~ Serialization ⇒ v1.11.0 [6462fe0b] ~ Sockets ⇒ v1.11.0 [2f01184e] ~ SparseArrays ⇒ v1.13.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] ↑ TOML v1.0.0 ⇒ v1.0.3 [a4e569a6] ↓ Tar v1.10.1 ⇒ v1.10.0 [8dfed614] ~ Test ⇒ v1.11.0 [cf7118a7] ~ UUIDs ⇒ v1.11.0 [4ec0a83e] ~ Unicode ⇒ v1.11.0 [e66e0078] ↑ CompilerSupportLibraries_jll v0.5.2+0 ⇒ v1.3.0+1 [deac9b47] ↑ LibCURL_jll v7.84.0+0 ⇒ v8.16.0+0 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] ↑ LibSSH2_jll v1.10.2+0 ⇒ v1.11.3+1 [14a3606d] ↑ MozillaCACerts_jll v2022.2.1 ⇒ v2025.11.4 [4536629a] ↑ OpenBLAS_jll v0.3.20+0 ⇒ v0.3.29+0 [05823500] ↑ OpenLibm_jll v0.8.1+0 ⇒ v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] ↑ Zlib_jll v1.2.12+3 ⇒ v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] ↑ libblastrampoline_jll v5.1.1+0 ⇒ v5.15.0+0 [8e850ede] ↑ nghttp2_jll v1.48.0+0 ⇒ v1.68.0+1 [3f19e933] ↑ p7zip_jll v17.4.0+0 ⇒ v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Test Successfully re-resolved Status `/tmp/jl_jFTEnY/Project.toml` [31c24e10] Distributions v0.25.122 [f96f1e2a] GaussianVariationalInference v0.2.3 [37e2e46d] LinearAlgebra v1.13.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_jFTEnY/Manifest.toml` [47edcb42] ADTypes v1.19.0 [621f4979] AbstractFFTs v1.5.0 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [dce04be8] ArgCheck v2.5.0 [4fba245c] ArrayInterface v7.22.0 [a9b6321e] Atomix v1.1.2 [198e06fe] BangBang v0.4.6 [9718e550] Baselet v0.1.1 [fa961155] CEnum v0.5.0 [082447d4] ChainRules v1.72.6 [d360d2e6] ChainRulesCore v1.26.0 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [187b0558] ConstructionBase v1.6.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.19.3 [e2d170a0] DataValueInterfaces v1.0.0 [244e2a9f] DefineSingletons v0.1.2 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.11 [31c24e10] Distributions v0.25.122 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.5 [1a297f60] FillArrays v1.15.0 [6a86dc24] FiniteDiff v2.29.0 ⌅ [f6369f11] ForwardDiff v0.10.39 [069b7b12] FunctionWrappers v1.1.3 [0c68f7d7] GPUArrays v11.2.6 [46192b85] GPUArraysCore v0.2.0 [f96f1e2a] GaussianVariationalInference v0.2.3 [076d061b] HashArrayMappedTries v0.2.0 [34004b35] HypergeometricFunctions v0.3.28 [7869d1d1] IRTools v0.4.15 [22cec73e] InitialValues v0.3.1 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [63c18a36] KernelAbstractions v0.9.39 [929cbde3] LLVM v9.4.4 [d3d80556] LineSearches v7.4.0 [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.16 [128add7d] MicroCollections v0.2.0 [e1d29d7a] Missings v1.2.0 [d41bc354] NLSolversBase v7.10.0 [77ba4419] NaNMath v1.1.3 [429524aa] Optim v1.13.2 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.36 [d96e819e] Parameters v0.12.3 [85a6dd25] PositiveFactorizations v0.2.4 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [c1ae055f] RealDot v0.1.0 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [37e2e3b7] ReverseDiff v1.16.1 [79098fc4] Rmath v0.9.0 [7e506255] ScopedValues v1.5.0 [efcf1570] Setfield v1.1.2 [a2af1166] SortingAlgorithms v1.2.2 [dc90abb0] SparseInverseSubset v0.1.2 [276daf66] SpecialFunctions v2.6.1 [171d559e] SplittablesBase v0.1.15 [90137ffa] StaticArrays v1.9.15 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.8 [4c63d2b9] StatsFuns v1.5.2 [09ab397b] StructArrays v0.7.2 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [28d57a85] Transducers v0.4.85 [3a884ed6] UnPack v1.0.2 [013be700] UnsafeAtomics v0.3.0 ⌅ [e88e6eb3] Zygote v0.6.77 [700de1a5] ZygoteRules v0.2.7 [dad2f222] LLVMExtra_jll v0.0.38+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.16.0+0 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.11.4 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.68.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... ERROR: LoadError: ParseError: # Error @ /home/pkgeval/.julia/packages/Zygote/zowwZ/src/lib/array.jl:620:19  # to create a Diagonal  tr(x), function (Δ::Number) # └─────────┘ ── Invalid signature in function definition Stacktrace:  [1] top-level scope  @ ~/.julia/packages/Zygote/zowwZ/src/lib/array.jl:620  [2] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:310  [3] top-level scope  @ ~/.julia/packages/Zygote/zowwZ/src/Zygote.jl:39  [4] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [5] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3147  [6] top-level scope  @ stdin:5  [7] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2993  [9] include_string  @ ./loading.jl:3003 [inlined]  [10] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [11] _start()  @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/Zygote/zowwZ/src/lib/array.jl:620 in expression starting at /home/pkgeval/.julia/packages/Zygote/zowwZ/src/Zygote.jl:1 in expression starting at stdin:5 ERROR: LoadError: ParseError: # Error @ /home/pkgeval/.julia/packages/Zygote/zowwZ/src/lib/array.jl:620:19  # to create a Diagonal  tr(x), function (Δ::Number) # └─────────┘ ── Invalid signature in function definition Stacktrace:  [1] top-level scope  @ ~/.julia/packages/Zygote/zowwZ/src/lib/array.jl:620  [2] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:310  [3] top-level scope  @ ~/.julia/packages/Zygote/zowwZ/src/Zygote.jl:39  [4] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [5] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3147  [6] top-level scope  @ stdin:5  [7] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2993  [9] include_string  @ ./loading.jl:3003 [inlined]  [10] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [11] _start()  @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/Zygote/zowwZ/src/lib/array.jl:620 in expression starting at /home/pkgeval/.julia/packages/Zygote/zowwZ/src/Zygote.jl:1 in expression starting at stdin:5 1 dependency had output during precompilation: ┌ Zygote │ [Output was shown above] └ ERROR: LoadError: The following 1 package failed to precompile: Zygote Failed to precompile Zygote [e88e6eb3-aa80-5325-afca-941959d7151f] to "/home/pkgeval/.julia/compiled/v1.14/Zygote/jl_4xhuP5" (ProcessExited(1)). in expression starting at /home/pkgeval/.julia/packages/GaussianVariationalInference/7bUCM/src/GaussianVariationalInference.jl:1 in expression starting at /home/pkgeval/.julia/packages/GaussianVariationalInference/7bUCM/test/runtests.jl:1 Testing failed after 120.59s ERROR: LoadError: Package GaussianVariationalInference errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2946 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2795 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:572 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:548 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [12] include(mod::Module, _path::String) @ Base ./Base.jl:309 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 607.61s: package fails to precompile