Package evaluation to test AAindex on Julia 1.14.0-DEV.1260 (89243d1cdf*) started at 2025-11-16T19:32:08.429 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.94s ################################################################################ # Installation # Installing AAindex... Resolving package versions... Installed InlineStrings ─────────────── v1.4.5 Installed CodecZlib ─────────────────── v0.7.8 Installed ConcurrentUtilities ───────── v2.5.0 Installed FilePathsBase ─────────────── v0.9.24 Installed URIs ──────────────────────── v1.6.1 Installed DataDeps ──────────────────── v0.7.13 Installed DataStructures ────────────── v0.19.3 Installed ExceptionUnwrapping ───────── v0.1.11 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed Compat ────────────────────── v4.18.1 Installed DataAPI ───────────────────── v1.16.0 Installed OrderedCollections ────────── v1.8.1 Installed Statistics ────────────────── v1.11.1 Installed TranscodingStreams ────────── v0.11.3 Installed DataValueInterfaces ───────── v1.0.0 Installed InvertedIndices ───────────── v1.3.1 Installed SentinelArrays ────────────── v1.4.8 Installed OpenSSL ───────────────────── v1.6.0 Installed Twiddle ───────────────────── v1.1.2 Installed MbedTLS ───────────────────── v1.1.9 Installed PrecompileTools ───────────── v1.3.3 Installed LoggingExtras ─────────────── v1.2.0 Installed StaticArraysCore ──────────── v1.4.4 Installed StringManipulation ────────── v0.4.1 Installed StaticArrays ──────────────── v1.9.15 Installed HTTP ──────────────────────── v1.10.19 Installed BioSymbols ────────────────── v5.2.0 Installed BitFlags ──────────────────── v0.1.9 Installed Parsers ───────────────────── v2.8.3 Installed Tables ────────────────────── v1.12.1 Installed Reexport ──────────────────── v1.2.2 Installed SimpleBufferStream ────────── v1.2.0 Installed Scratch ───────────────────── v1.3.0 Installed PrettyTables ──────────────── v3.1.0 Installed Missings ──────────────────── v1.2.0 Installed Preferences ───────────────── v1.5.0 Installed DataFrames ────────────────── v1.8.1 Installed WeakRefStrings ────────────── v1.4.2 Installed PooledArrays ──────────────── v1.4.3 Installed JLLWrappers ───────────────── v1.7.1 Installed LaTeXStrings ──────────────── v1.4.0 Installed TableTraits ───────────────── v1.0.1 Installed MbedTLS_jll ───────────────── v2.28.10+0 Installed Crayons ───────────────────── v4.1.1 Installed SortingAlgorithms ─────────── v1.2.2 Installed WorkerUtilities ───────────── v1.6.1 Installed CSV ───────────────────────── v0.10.15 Installed AAindex ───────────────────── v0.3.0 Installed BioSequences ──────────────── v3.5.0 Installing 1 artifacts Installed artifact MbedTLS 2.2 MiB Updating `~/.julia/environments/v1.14/Project.toml` [1cd36ffe] + AAindex v0.3.0 Updating `~/.julia/environments/v1.14/Manifest.toml` [1cd36ffe] + AAindex v0.3.0 [7e6ae17a] + BioSequences v3.5.0 [3c28c6f8] + BioSymbols v5.2.0 [d1d4a3ce] + BitFlags v0.1.9 [336ed68f] + CSV v0.10.15 [944b1d66] + CodecZlib v0.7.8 [34da2185] + Compat v4.18.1 [f0e56b4a] + ConcurrentUtilities v2.5.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [124859b0] + DataDeps v0.7.13 [a93c6f00] + DataFrames v1.8.1 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [460bff9d] + ExceptionUnwrapping v0.1.11 [48062228] + FilePathsBase v0.9.24 [cd3eb016] + HTTP v1.10.19 [842dd82b] + InlineStrings v1.4.5 [41ab1584] + InvertedIndices v1.3.1 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [b964fa9f] + LaTeXStrings v1.4.0 [e6f89c97] + LoggingExtras v1.2.0 [739be429] + MbedTLS v1.1.9 [e1d29d7a] + Missings v1.2.0 [4d8831e6] + OpenSSL v1.6.0 [bac558e1] + OrderedCollections v1.8.1 [69de0a69] + Parsers v2.8.3 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [08abe8d2] + PrettyTables v3.1.0 [189a3867] + Reexport v1.2.2 [6c6a2e73] + Scratch v1.3.0 [91c51154] + SentinelArrays v1.4.8 [777ac1f9] + SimpleBufferStream v1.2.0 [a2af1166] + SortingAlgorithms v1.2.2 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [892a3eda] + StringManipulation v0.4.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [3bb67fe8] + TranscodingStreams v0.11.3 [7200193e] + Twiddle v1.1.2 [5c2747f8] + URIs v1.6.1 [ea10d353] + WeakRefStrings v1.4.2 [76eceee3] + WorkerUtilities v1.6.1 [c8ffd9c3] + MbedTLS_jll v2.28.10+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 [3f19e933] + p7zip_jll v17.7.0+0 Installation completed after 9.18s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... WARNING: Imported binding Operations.project_rel_path was undeclared at import time during import to TestEnv. 4537.9 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. 1 dependency had output during precompilation: ┌ TestEnv │ WARNING: Imported binding Operations.project_rel_path was undeclared at import time during import to TestEnv. └ ┌ Error: Failed to use TestEnv.jl; test dependencies will not be precompiled │ exception = │ UndefVarError: `project_rel_path` not defined in `TestEnv` │ Suggestion: this global was defined as `Pkg.Operations.project_rel_path` but not assigned a value. │ Stacktrace: │ [1] get_test_dir(ctx::Pkg.Types.Context, pkgspec::PackageSpec) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:75 │ [2] test_dir_has_project_file │ @ ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:52 [inlined] │ [3] maybe_gen_project_override! │ @ ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:83 [inlined] │ [4] activate(pkg::String; allow_reresolve::Bool) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/activate_set.jl:12 │ [5] activate(pkg::String) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/activate_set.jl:9 │ [6] top-level scope │ @ /PkgEval.jl/scripts/precompile.jl:24 │ [7] include(mod::Module, _path::String) │ @ Base ./Base.jl:309 │ [8] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:344 │ [9] _start() │ @ Base ./client.jl:577 └ @ Main /PkgEval.jl/scripts/precompile.jl:26 Precompiling package dependencies... Precompiling packages... 1777.7 ms ✓ InlineStrings 781.3 ms ✓ Reexport 1117.2 ms ✓ Statistics 863.6 ms ✓ DataAPI 800.9 ms ✓ DataValueInterfaces 959.5 ms ✓ StaticArraysCore 1182.6 ms ✓ URIs 1227.9 ms ✓ OrderedCollections 842.6 ms ✓ InvertedIndices 834.8 ms ✓ Twiddle 1459.9 ms ✓ BitFlags 1933.4 ms ✓ ConcurrentUtilities 1360.0 ms ✓ WorkerUtilities 1426.5 ms ✓ TranscodingStreams 821.5 ms ✓ SimpleBufferStream 803.7 ms ✓ IteratorInterfaceExtensions 896.6 ms ✓ LaTeXStrings 2029.8 ms ✓ Crayons 2847.5 ms ✓ SentinelArrays 920.9 ms ✓ Scratch 1107.9 ms ✓ LoggingExtras 1184.7 ms ✓ Compat 1160.1 ms ✓ Preferences 1536.3 ms ✓ ExceptionUnwrapping 962.3 ms ✓ Missings 1013.8 ms ✓ PooledArrays 3578.0 ms ✓ DataStructures 4039.4 ms ✓ OpenSSL 942.6 ms ✓ CodecZlib 756.0 ms ✓ TableTraits 863.8 ms ✓ Compat → CompatLinearAlgebraExt 1743.2 ms ✓ JLLWrappers 1426.7 ms ✓ PrecompileTools 1469.0 ms ✓ SortingAlgorithms 1802.8 ms ✓ Tables 2179.7 ms ✓ FilePathsBase 1485.5 ms ✓ MbedTLS_jll 2693.7 ms ✓ BioSymbols 13500.5 ms ✓ StaticArrays 3203.4 ms ✓ StringManipulation 17443.5 ms ✓ Parsers 2108.6 ms ✓ FilePathsBase → FilePathsBaseTestExt 758.8 ms ✓ FilePathsBase → FilePathsBaseMmapExt 1552.3 ms ✓ MbedTLS 9080.2 ms ✓ BioSequences 1409.5 ms ✓ StaticArrays → StaticArraysStatisticsExt 37382.7 ms ✓ PrettyTables 908.0 ms ✓ InlineStrings → ParsersExt 25886.7 ms ✓ HTTP 91303.7 ms ✓ DataFrames 2480.7 ms ✓ WeakRefStrings 6034.2 ms ✓ DataDeps 30344.4 ms ✓ CSV 14448.3 ms ✓ AAindex 54 dependencies successfully precompiled in 313 seconds. 21 already precompiled. Precompilation completed after 324.66s ################################################################################ # Testing # Testing AAindex Status `/tmp/jl_CPIqGj/Project.toml` [1cd36ffe] AAindex v0.3.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_CPIqGj/Manifest.toml` [1cd36ffe] AAindex v0.3.0 [7e6ae17a] BioSequences v3.5.0 [3c28c6f8] BioSymbols v5.2.0 [d1d4a3ce] BitFlags v0.1.9 [336ed68f] CSV v0.10.15 [944b1d66] CodecZlib v0.7.8 [34da2185] Compat v4.18.1 [f0e56b4a] ConcurrentUtilities v2.5.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [124859b0] DataDeps v0.7.13 [a93c6f00] DataFrames v1.8.1 [864edb3b] DataStructures v0.19.3 [e2d170a0] DataValueInterfaces v1.0.0 [460bff9d] ExceptionUnwrapping v0.1.11 [48062228] FilePathsBase v0.9.24 [cd3eb016] HTTP v1.10.19 [842dd82b] InlineStrings v1.4.5 [41ab1584] InvertedIndices v1.3.1 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [b964fa9f] LaTeXStrings v1.4.0 [e6f89c97] LoggingExtras v1.2.0 [739be429] MbedTLS v1.1.9 [e1d29d7a] Missings v1.2.0 [4d8831e6] OpenSSL v1.6.0 [bac558e1] OrderedCollections v1.8.1 [69de0a69] Parsers v2.8.3 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 [08abe8d2] PrettyTables v3.1.0 [189a3867] Reexport v1.2.2 [6c6a2e73] Scratch v1.3.0 [91c51154] SentinelArrays v1.4.8 [777ac1f9] SimpleBufferStream v1.2.0 [a2af1166] SortingAlgorithms v1.2.2 [90137ffa] StaticArrays v1.9.15 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [892a3eda] StringManipulation v0.4.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [3bb67fe8] TranscodingStreams v0.11.3 [7200193e] Twiddle v1.1.2 [5c2747f8] URIs v1.6.1 [ea10d353] WeakRefStrings v1.4.2 [76eceee3] WorkerUtilities v1.6.1 [c8ffd9c3] MbedTLS_jll v2.28.10+0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [14a3606d] MozillaCACerts_jll v2025.11.4 [4536629a] OpenBLAS_jll v0.3.29+0 [458c3c95] OpenSSL_jll v3.5.4+0 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.15.0+0 [3f19e933] p7zip_jll v17.7.0+0 Testing Running tests... ERROR: LoadError: InitError: HTTP.RequestError: HTTP.Request: HTTP.Messages.Request: """ GET /ftp/db/community/aaindex/aaindex1 HTTP/1.1 Host: www.genome.jp Accept: */* User-Agent: HTTP.jl/1.14.0-DEV.1260 Content-Length: 0 [Message Body was streamed]"""Underlying error: IOError: read: connection reset by peer (ECONNRESET) Stacktrace: [1] (::HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}})(req::HTTP.Messages.Request; proxy::Nothing, socket_type::Type, socket_type_tls::Nothing, readtimeout::Int64, connect_timeout::Int64, logerrors::Bool, logtag::Nothing, closeimmediately::Bool, kw::@Kwargs{iofunction::HTTP.var"#16#17"{Float32, String, String, Vector{String}, HTTP.var"#format_bytes_per_second#15"{HTTP.var"#format_bytes#13"}, HTTP.var"#format_seconds#14", HTTP.var"#format_bytes#13", HTTP.var"#format_progress#12"}, decompress::Bool, verbose::Int64}) @ HTTP.ConnectionRequest ~/.julia/packages/HTTP/ShTJs/src/clientlayers/ConnectionRequest.jl:143 [2] connections @ ~/.julia/packages/HTTP/ShTJs/src/clientlayers/ConnectionRequest.jl:60 [inlined] [3] (::Base.var"#47#48"{Base.var"#49#50"{ExponentialBackOff, HTTP.RetryRequest.var"#retrylayer##2#retrylayer##3"{Int64, typeof(HTTP.RetryRequest.FALSE), HTTP.Messages.Request, Base.RefValue{Int64}}, HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}})(args::HTTP.Messages.Request; kwargs::@Kwargs{iofunction::HTTP.var"#16#17"{Float32, String, String, Vector{String}, HTTP.var"#format_bytes_per_second#15"{HTTP.var"#format_bytes#13"}, HTTP.var"#format_seconds#14", HTTP.var"#format_bytes#13", HTTP.var"#format_progress#12"}, decompress::Bool, verbose::Int64}) @ Base ./error.jl:309 [4] kwcall(::@NamedTuple{iofunction::HTTP.var"#16#17"{Float32, String, String, Vector{String}, HTTP.var"#format_bytes_per_second#15"{HTTP.var"#format_bytes#13"}, HTTP.var"#format_seconds#14", HTTP.var"#format_bytes#13", HTTP.var"#format_progress#12"}, decompress::Bool, verbose::Int64}, ::Base.var"#47#48"{Base.var"#49#50"{ExponentialBackOff, HTTP.RetryRequest.var"#retrylayer##2#retrylayer##3"{Int64, typeof(HTTP.RetryRequest.FALSE), HTTP.Messages.Request, Base.RefValue{Int64}}, HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}, args::HTTP.Messages.Request) @ Base ./error.jl:304 [5] (::HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}})(req::HTTP.Messages.Request; retry::Bool, retries::Int64, retry_delays::ExponentialBackOff, retry_check::Function, retry_non_idempotent::Bool, kw::@Kwargs{iofunction::HTTP.var"#16#17"{Float32, String, String, Vector{String}, HTTP.var"#format_bytes_per_second#15"{HTTP.var"#format_bytes#13"}, HTTP.var"#format_seconds#14", HTTP.var"#format_bytes#13", HTTP.var"#format_progress#12"}, decompress::Bool, verbose::Int64}) @ HTTP.RetryRequest ~/.julia/packages/HTTP/ShTJs/src/clientlayers/RetryRequest.jl:75 [6] manageretries @ ~/.julia/packages/HTTP/ShTJs/src/clientlayers/RetryRequest.jl:30 [inlined] [7] (::HTTP.CookieRequest.var"#managecookies#cookielayer##0"{HTTP.CookieRequest.var"#managecookies#1#cookielayer##1"{HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}}})(req::HTTP.Messages.Request; cookies::Bool, cookiejar::HTTP.Cookies.CookieJar, kw::@Kwargs{iofunction::HTTP.var"#16#17"{Float32, String, String, Vector{String}, HTTP.var"#format_bytes_per_second#15"{HTTP.var"#format_bytes#13"}, HTTP.var"#format_seconds#14", HTTP.var"#format_bytes#13", HTTP.var"#format_progress#12"}, decompress::Bool, verbose::Int64}) @ HTTP.CookieRequest ~/.julia/packages/HTTP/ShTJs/src/clientlayers/CookieRequest.jl:42 [8] kwcall(::@NamedTuple{iofunction::HTTP.var"#16#17"{Float32, String, String, Vector{String}, HTTP.var"#format_bytes_per_second#15"{HTTP.var"#format_bytes#13"}, HTTP.var"#format_seconds#14", HTTP.var"#format_bytes#13", HTTP.var"#format_progress#12"}, decompress::Bool, verbose::Int64}, ::HTTP.CookieRequest.var"#managecookies#cookielayer##0"{HTTP.CookieRequest.var"#managecookies#1#cookielayer##1"{HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}}}, req::HTTP.Messages.Request) @ HTTP.CookieRequest ~/.julia/packages/HTTP/ShTJs/src/clientlayers/CookieRequest.jl:19 [9] (::HTTP.HeadersRequest.var"#defaultheaders#headerslayer##0"{HTTP.HeadersRequest.var"#defaultheaders#1#headerslayer##1"{HTTP.CookieRequest.var"#managecookies#cookielayer##0"{HTTP.CookieRequest.var"#managecookies#1#cookielayer##1"{HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}}}}})(req::HTTP.Messages.Request; iofunction::Function, decompress::Bool, basicauth::Bool, detect_content_type::Bool, canonicalize_headers::Bool, kw::@Kwargs{verbose::Int64}) @ HTTP.HeadersRequest ~/.julia/packages/HTTP/ShTJs/src/clientlayers/HeadersRequest.jl:71 [10] defaultheaders @ ~/.julia/packages/HTTP/ShTJs/src/clientlayers/HeadersRequest.jl:14 [inlined] [11] (::HTTP.RedirectRequest.var"#redirects#redirectlayer##0"{HTTP.RedirectRequest.var"#redirects#1#redirectlayer##1"{HTTP.HeadersRequest.var"#defaultheaders#headerslayer##0"{HTTP.HeadersRequest.var"#defaultheaders#1#headerslayer##1"{HTTP.CookieRequest.var"#managecookies#cookielayer##0"{HTTP.CookieRequest.var"#managecookies#1#cookielayer##1"{HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}}}}}}})(req::HTTP.Messages.Request; redirect::Bool, redirect_limit::Int64, redirect_method::Nothing, forwardheaders::Bool, response_stream::Nothing, kw::@Kwargs{verbose::Int64, iofunction::HTTP.var"#16#17"{Float32, String, String, Vector{String}, HTTP.var"#format_bytes_per_second#15"{HTTP.var"#format_bytes#13"}, HTTP.var"#format_seconds#14", HTTP.var"#format_bytes#13", HTTP.var"#format_progress#12"}, decompress::Bool}) @ HTTP.RedirectRequest ~/.julia/packages/HTTP/ShTJs/src/clientlayers/RedirectRequest.jl:25 [12] redirects @ ~/.julia/packages/HTTP/ShTJs/src/clientlayers/RedirectRequest.jl:14 [inlined] [13] (::HTTP.MessageRequest.var"#makerequest#messagelayer##0"{HTTP.MessageRequest.var"#makerequest#1#messagelayer##1"{HTTP.RedirectRequest.var"#redirects#redirectlayer##0"{HTTP.RedirectRequest.var"#redirects#1#redirectlayer##1"{HTTP.HeadersRequest.var"#defaultheaders#headerslayer##0"{HTTP.HeadersRequest.var"#defaultheaders#1#headerslayer##1"{HTTP.CookieRequest.var"#managecookies#cookielayer##0"{HTTP.CookieRequest.var"#managecookies#1#cookielayer##1"{HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}}}}}}}}})(method::String, url::URIs.URI, headers::Vector{Pair{SubString{String}, SubString{String}}}, body::Nothing; copyheaders::Bool, response_stream::Nothing, http_version::HTTP.Strings.HTTPVersion, verbose::Int64, kw::@Kwargs{iofunction::HTTP.var"#16#17"{Float32, String, String, Vector{String}, HTTP.var"#format_bytes_per_second#15"{HTTP.var"#format_bytes#13"}, HTTP.var"#format_seconds#14", HTTP.var"#format_bytes#13", HTTP.var"#format_progress#12"}, decompress::Bool}) @ HTTP.MessageRequest ~/.julia/packages/HTTP/ShTJs/src/clientlayers/MessageRequest.jl:35 [14] makerequest @ ~/.julia/packages/HTTP/ShTJs/src/clientlayers/MessageRequest.jl:24 [inlined] [15] request(stack::HTTP.MessageRequest.var"#makerequest#messagelayer##0"{HTTP.MessageRequest.var"#makerequest#1#messagelayer##1"{HTTP.RedirectRequest.var"#redirects#redirectlayer##0"{HTTP.RedirectRequest.var"#redirects#1#redirectlayer##1"{HTTP.HeadersRequest.var"#defaultheaders#headerslayer##0"{HTTP.HeadersRequest.var"#defaultheaders#1#headerslayer##1"{HTTP.CookieRequest.var"#managecookies#cookielayer##0"{HTTP.CookieRequest.var"#managecookies#1#cookielayer##1"{HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}}}}}}}}}, method::String, url::String, h::Vector{Pair{SubString{String}, SubString{String}}}, b::Nothing, q::Nothing; headers::Vector{Pair{SubString{String}, SubString{String}}}, body::Nothing, query::Nothing, kw::@Kwargs{iofunction::HTTP.var"#16#17"{Float32, String, String, Vector{String}, HTTP.var"#format_bytes_per_second#15"{HTTP.var"#format_bytes#13"}, HTTP.var"#format_seconds#14", HTTP.var"#format_bytes#13", HTTP.var"#format_progress#12"}, decompress::Bool}) @ HTTP ~/.julia/packages/HTTP/ShTJs/src/HTTP.jl:457 [16] kwcall(::@NamedTuple{iofunction::HTTP.var"#16#17"{Float32, String, String, Vector{String}, HTTP.var"#format_bytes_per_second#15"{HTTP.var"#format_bytes#13"}, HTTP.var"#format_seconds#14", HTTP.var"#format_bytes#13", HTTP.var"#format_progress#12"}, decompress::Bool}, ::typeof(HTTP.request), stack::Function, method::String, url::String, h::Vector{Pair{SubString{String}, SubString{String}}}, b::Nothing, q::Nothing) @ HTTP ~/.julia/packages/HTTP/ShTJs/src/HTTP.jl:455 [17] #request#21 @ ~/.julia/packages/HTTP/ShTJs/src/HTTP.jl:315 [inlined] [18] request @ ~/.julia/packages/HTTP/ShTJs/src/HTTP.jl:313 [inlined] [19] open @ ~/.julia/packages/HTTP/ShTJs/src/HTTP.jl:579 [inlined] [20] download(url::String, local_path::String, headers::Vector{Pair{SubString{String}, SubString{String}}}; update_period::Float32, kw::@Kwargs{decompress::Bool}) @ HTTP ~/.julia/packages/HTTP/ShTJs/src/download.jl:106 ┌[21] download │ @ ~/.julia/packages/HTTP/ShTJs/src/download.jl:96 [inlined] ╰──── repeated 2 times [23] #fetch_http#15 @ ~/.julia/packages/DataDeps/Y2lje/src/fetch_helpers.jl:80 [inlined] [24] fetch_http(remotepath::String, localdir::String) @ DataDeps ~/.julia/packages/DataDeps/Y2lje/src/fetch_helpers.jl:78 [25] fetch_default(remotepath::String, localdir::String) @ DataDeps ~/.julia/packages/DataDeps/Y2lje/src/fetch_helpers.jl:33 [26] run_fetch @ ~/.julia/packages/DataDeps/Y2lje/src/resolution_automatic.jl:99 [inlined] [27] #run_fetch##0 @ ~/.julia/packages/DataDeps/Y2lje/src/resolution_automatic.jl:104 [inlined] [28] (::Base.var"#950#951"{DataDeps.var"#run_fetch##0#run_fetch##1"{typeof(DataDeps.fetch_default), String}})(r::Base.RefValue{Any}, args::Tuple{String}) @ Base ./asyncmap.jl:96 [29] (::Base.var"#start_worker_task!##0#start_worker_task!##1"{Base.var"#950#951"{DataDeps.var"#run_fetch##0#run_fetch##1"{typeof(DataDeps.fetch_default), String}}, Channel{Any}, Nothing})() @ Base ./asyncmap.jl:230 Stacktrace: [1] (::Base.var"#maptwice##0#maptwice##1")(x::Task) @ Base ./asyncmap.jl:173 [2] foreach(f::Base.var"#maptwice##0#maptwice##1", itr::Vector{Any}) @ Base ./abstractarray.jl:3206 [3] maptwice(wrapped_f::Function, chnl::Channel{Any}, worker_tasks::Vector{Any}, c::Vector{String}) @ Base ./asyncmap.jl:173 [4] wrap_n_exec_twice @ ./asyncmap.jl:149 [inlined] [5] #async_usemap#936 @ ./asyncmap.jl:99 [inlined] [6] async_usemap @ ./asyncmap.jl:80 [inlined] [7] #asyncmap#935 @ ./asyncmap.jl:77 [inlined] [8] asyncmap @ ./asyncmap.jl:76 [inlined] [9] run_fetch(fetch_method::Function, remotepaths::Vector{String}, localdir::String) @ DataDeps ~/.julia/packages/DataDeps/Y2lje/src/resolution_automatic.jl:104 [10] download(datadep::DataDeps.DataDep, localdir::String; remotepath::Vector{String}, i_accept_the_terms_of_use::Nothing, skip_checksum::Bool) @ DataDeps ~/.julia/packages/DataDeps/Y2lje/src/resolution_automatic.jl:78 [11] download(datadep::DataDeps.DataDep, localdir::String) @ DataDeps ~/.julia/packages/DataDeps/Y2lje/src/resolution_automatic.jl:63 [12] handle_missing @ ~/.julia/packages/DataDeps/Y2lje/src/resolution_automatic.jl:10 [inlined] [13] _resolve(datadep::DataDeps.DataDep, calling_filepath::String) @ DataDeps ~/.julia/packages/DataDeps/Y2lje/src/resolution.jl:83 [14] resolve(datadep::DataDeps.DataDep, inner_filepath::String, calling_filepath::String) @ DataDeps ~/.julia/packages/DataDeps/Y2lje/src/resolution.jl:29 [15] resolve(datadep_name::String, inner_filepath::String, calling_filepath::String) @ DataDeps ~/.julia/packages/DataDeps/Y2lje/src/resolution.jl:54 [16] resolve @ ~/.julia/packages/DataDeps/Y2lje/src/resolution.jl:73 [inlined] [17] __init__() @ AAindex ~/.julia/packages/AAindex/rSkuG/src/init.jl:42 [18] run_module_init(mod::Module, i::Int64) @ Base ./loading.jl:1457 [19] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) @ Base ./loading.jl:1445 [20] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}; register::Bool) @ Base ./loading.jl:1333 [21] _include_from_serialized @ ./loading.jl:1290 [inlined] [22] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String}) @ Base ./loading.jl:2165 [23] _require_search_from_serialized @ ./loading.jl:2059 [inlined] [24] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2709 [25] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2575 [26] macro expansion @ ./loading.jl:2503 [inlined] [27] macro expansion @ ./lock.jl:376 [inlined] [28] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2467 [29] require @ ./loading.jl:2443 [inlined] [30] eval_import_path @ ./module.jl:36 [inlined] [31] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [32] _eval_using @ ./module.jl:137 [inlined] [33] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [34] top-level scope @ ~/.julia/packages/AAindex/rSkuG/test/runtests.jl:3 [35] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [36] top-level scope @ none:6 [37] eval(m::Module, e::Any) @ Core ./boot.jl:489 [38] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [39] _start() @ Base ./client.jl:577 during initialization of module AAindex in expression starting at /home/pkgeval/.julia/packages/AAindex/rSkuG/test/runtests.jl:3 Testing failed after 73.3s ERROR: LoadError: Package AAindex errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2946 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2795 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:572 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:548 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [12] include(mod::Module, _path::String) @ Base ./Base.jl:309 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 447.59s: package tests unexpectedly errored