Package evaluation to test Stheno on Julia 1.14.0-DEV.73 (4c8bca6988*) started at 2025-11-13T18:13:43.080 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.69s ################################################################################ # Installation # Installing Stheno... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [8188c328] + Stheno v0.8.2 Updating `~/.julia/environments/v1.14/Manifest.toml` [99985d1d] + AbstractGPs v0.5.24 [66dad0bd] + AliasTables v1.1.3 [4c555306] + ArrayLayouts v1.12.0 ⌅ [8e7c35d0] + BlockArrays v0.16.43 [d360d2e6] + ChainRulesCore v1.26.0 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.6.0 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.3 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.122 [ffbed154] + DocStringExtensions v0.9.5 [1a297f60] + FillArrays v1.15.0 [d9f16b24] + Functors v0.5.2 [34004b35] + HypergeometricFunctions v0.3.28 [92d709cd] + IrrationalConstants v0.2.6 [692b3bcd] + JLLWrappers v1.7.1 [ec8451be] + KernelFunctions v0.10.66 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.36 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.8 [4c63d2b9] + StatsFuns v1.5.2 [8188c328] + Stheno v0.8.2 [62fd8b95] + TensorCore v0.1.1 [700de1a5] + ZygoteRules v0.2.7 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 5.82s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Error: Failed to use TestEnv.jl; test dependencies will not be precompiled │ exception = │ UndefVarError: `project_rel_path` not defined in `TestEnv` │ Suggestion: this global was defined as `Pkg.Operations.project_rel_path` but not assigned a value. │ Stacktrace: │ [1] get_test_dir(ctx::Pkg.Types.Context, pkgspec::PackageSpec) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:75 │ [2] test_dir_has_project_file │ @ ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:52 [inlined] │ [3] maybe_gen_project_override! │ @ ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/common.jl:83 [inlined] │ [4] activate(pkg::String; allow_reresolve::Bool) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/activate_set.jl:12 │ [5] activate(pkg::String) │ @ TestEnv ~/.julia/packages/TestEnv/i9lgt/src/julia-1.11/activate_set.jl:9 │ [6] top-level scope │ @ /PkgEval.jl/scripts/precompile.jl:24 │ [7] include(mod::Module, _path::String) │ @ Base ./Base.jl:309 │ [8] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:344 │ [9] _start() │ @ Base ./client.jl:577 └ @ Main /PkgEval.jl/scripts/precompile.jl:26 Precompiling package dependencies... Precompiling packages... 5229.6 ms ✓ StatsBase 4411.5 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 4656.5 ms ✓ BlockArrays 3264.5 ms ✓ StatsFuns 1610.2 ms ✓ PDMats → StatsBaseExt 11947.1 ms ✓ KernelFunctions 3830.9 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 11315.5 ms ✓ Distributions 3923.9 ms ✓ Distributions → DistributionsChainRulesCoreExt 4295.3 ms ✓ Distributions → DistributionsTestExt 6178.1 ms ✓ AbstractGPs 7640.3 ms ✓ Stheno 12 dependencies successfully precompiled in 70 seconds. 69 already precompiled. Precompilation completed after 82.85s ################################################################################ # Testing # Testing Stheno Status `/tmp/jl_XegIJb/Project.toml` ⌅ [e30172f5] Documenter v0.27.25 [26cc04aa] FiniteDifferences v0.12.33 [10745b16] Statistics v1.11.1 [8188c328] Stheno v0.8.2 [a759f4b9] TimerOutputs v0.5.29 ⌅ [e88e6eb3] Zygote v0.6.77 [37e2e46d] LinearAlgebra v1.13.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_XegIJb/Manifest.toml` [a4c015fc] ANSIColoredPrinters v0.0.1 [621f4979] AbstractFFTs v1.5.0 [99985d1d] AbstractGPs v0.5.24 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [4c555306] ArrayLayouts v1.12.0 [a9b6321e] Atomix v1.1.2 ⌅ [8e7c35d0] BlockArrays v0.16.43 [fa961155] CEnum v0.5.0 [082447d4] ChainRules v1.72.6 [d360d2e6] ChainRulesCore v1.26.0 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [187b0558] ConstructionBase v1.6.0 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.19.3 [e2d170a0] DataValueInterfaces v1.0.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.122 [ffbed154] DocStringExtensions v0.9.5 ⌅ [e30172f5] Documenter v0.27.25 [e2ba6199] ExprTools v0.1.10 [1a297f60] FillArrays v1.15.0 [26cc04aa] FiniteDifferences v0.12.33 [f6369f11] ForwardDiff v1.3.0 [d9f16b24] Functors v0.5.2 [0c68f7d7] GPUArrays v11.2.6 [46192b85] GPUArraysCore v0.2.0 [076d061b] HashArrayMappedTries v0.2.0 [34004b35] HypergeometricFunctions v0.3.28 ⌅ [b5f81e59] IOCapture v0.2.5 [7869d1d1] IRTools v0.4.15 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 ⌅ [682c06a0] JSON v0.21.4 [63c18a36] KernelAbstractions v0.9.39 [ec8451be] KernelFunctions v0.10.66 [929cbde3] LLVM v9.4.4 [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.16 [e1d29d7a] Missings v1.2.0 [77ba4419] NaNMath v1.1.3 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.36 [69de0a69] Parsers v2.8.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [c1ae055f] RealDot v0.1.0 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [708f8203] Richardson v1.4.2 [79098fc4] Rmath v0.9.0 [7e506255] ScopedValues v1.5.0 [a2af1166] SortingAlgorithms v1.2.2 [dc90abb0] SparseInverseSubset v0.1.2 [276daf66] SpecialFunctions v2.6.1 [90137ffa] StaticArrays v1.9.15 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.8 [4c63d2b9] StatsFuns v1.5.2 [8188c328] Stheno v0.8.2 [09ab397b] StructArrays v0.7.2 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [62fd8b95] TensorCore v0.1.1 [a759f4b9] TimerOutputs v0.5.29 [013be700] UnsafeAtomics v0.3.0 ⌅ [e88e6eb3] Zygote v0.6.77 [700de1a5] ZygoteRules v0.2.7 [dad2f222] LLVMExtra_jll v0.0.38+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.16.0+0 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.11.4 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.68.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... WARNING: Method definition zero(KernelFunctions.ColVecs{T, TX, S} where S where TX<:AbstractArray{T, 2} where T) in module KernelFunctions at /home/pkgeval/.julia/packages/KernelFunctions/Ms56q/src/utils.jl:96 overwritten in module Main at /home/pkgeval/.julia/packages/Stheno/ZSwgx/test/test_util.jl:54. gp: affine_transformations: doctests WARNING: Detected access to binding `Stheno.##docmeta#141` in a world prior to its definition world. Julia 1.12 has introduced more strict world age semantics for global bindings. !!! This code may malfunction under Revise. !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. To make this warning an error, and hence obtain a stack trace, use `julia --depwarn=error`. ┌ Warning: Unable to determine HTML(edit_link = ...) from remote HEAD branch, defaulting to "master". │ Calling `git remote` failed with an exception. Set JULIA_DEBUG=Documenter to see the error. │ Unless this is due to a configuration error, the relevant variable should be set explicitly. └ @ Documenter.Utilities ~/.julia/packages/Documenter/bYYzK/src/Utilities/Utilities.jl:822 [ Info: SetupBuildDirectory: setting up build directory. [ Info: Doctest: running doctests. [ Info: Skipped ExpandTemplates step (doctest only). [ Info: Skipped CrossReferences step (doctest only). [ Info: Skipped CheckDocument step (doctest only). [ Info: Skipped Populate step (doctest only). [ Info: Skipped RenderDocument step (doctest only). Test Summary: | Pass Total Time Stheno | 1179 1179 20m14.6s ───────────────────────────────────────────────────────────────────────────────────────────────────── Time Allocations ─────────────────────── ──────────────────────── Tot / % measured: 1224s / 99.2% 35.5GiB / 99.4% Section ncalls time %tot avg alloc %tot avg ───────────────────────────────────────────────────────────────────────────────────────────────────── affine_transformations 1 780s 64.3% 780s 23.8GiB 67.3% 23.8GiB addition 1 419s 34.5% 419s 12.8GiB 36.4% 12.8GiB Standardised Tests (correlated sum) 1 232s 19.1% 232s 6.69GiB 18.9% 6.69GiB adj_ad 9 26.8s 2.2% 2.98s 1.20GiB 3.4% 136MiB adj_fd 9 10.0s 0.8% 1.11s 336MiB 0.9% 37.3MiB Standardised Tests (independent sum) 1 139s 11.4% 139s 5.70GiB 16.1% 5.70GiB adj_ad 9 27.2s 2.2% 3.02s 1.51GiB 4.3% 172MiB adj_fd 9 11.5s 0.9% 1.27s 349MiB 1.0% 38.8MiB Correlated GPs 1 44.7s 3.7% 44.7s 414MiB 1.1% 414MiB Consistency Tests 1 18.4s 1.5% 18.4s 167MiB 0.5% 167MiB Verify mean / kernel numerically 1 3.00s 0.2% 3.00s 53.0MiB 0.1% 53.0MiB Consistency Tests 1 1.54s 0.1% 1.54s 16.2MiB 0.0% 16.2MiB product 1 173s 14.3% 173s 5.13GiB 14.5% 5.13GiB multiply by function 1 100s 8.2% 100s 2.76GiB 7.8% 2.76GiB Diff Tests 1 56.9s 4.7% 56.9s 2.07GiB 5.9% 2.07GiB adj_ad 9 22.1s 1.8% 2.45s 1.06GiB 3.0% 121MiB adj_fd 9 7.41s 0.6% 824ms 207MiB 0.6% 23.0MiB Consistency Tests 1 6.52s 0.5% 6.52s 135MiB 0.4% 135MiB multiply by constant 1 73.6s 6.1% 73.6s 2.37GiB 6.7% 2.37GiB Diff Tests 1 57.2s 4.7% 57.2s 2.30GiB 6.5% 2.30GiB adj_ad 9 19.1s 1.6% 2.12s 0.98GiB 2.8% 111MiB adj_fd 9 12.0s 1.0% 1.33s 339MiB 0.9% 37.7MiB Consistency Tests 1 4.00s 0.3% 4.00s 23.2MiB 0.1% 23.2MiB GP mul errors 1 14.1ms 0.0% 14.1ms 47.9KiB 0.0% 47.9KiB compose 1 91.5s 7.5% 91.5s 3.03GiB 8.6% 3.03GiB general 1 56.3s 4.6% 56.3s 2.01GiB 5.7% 2.01GiB Diff Tests 1 50.6s 4.2% 50.6s 1.94GiB 5.5% 1.94GiB adj_ad 9 15.7s 1.3% 1.75s 918MiB 2.5% 102MiB adj_fd 9 7.37s 0.6% 819ms 223MiB 0.6% 24.8MiB Consistency Tests 1 4.24s 0.3% 4.24s 44.7MiB 0.1% 44.7MiB Stretch 1 29.1s 2.4% 29.1s 911MiB 2.5% 911MiB scalar stretch 1 28.3s 2.3% 28.3s 894MiB 2.5% 894MiB scalar input 1 27.4s 2.3% 27.4s 889MiB 2.5% 889MiB adj_fd 9 10.2s 0.8% 1.14s 301MiB 0.8% 33.5MiB adj_ad 9 3.68s 0.3% 409ms 179MiB 0.5% 19.9MiB vector input 1 847ms 0.1% 847ms 4.33MiB 0.0% 4.33MiB Vector stretch 1 657ms 0.1% 657ms 13.4MiB 0.0% 13.4MiB Matrix stretch 1 151ms 0.0% 151ms 3.89MiB 0.0% 3.89MiB Shift 1 3.20s 0.3% 3.20s 52.4MiB 0.1% 52.4MiB Shift{Vector{Float64}} 1 1.70s 0.1% 1.70s 19.2MiB 0.1% 19.2MiB Shift{Float64} 1 1.50s 0.1% 1.50s 33.2MiB 0.1% 33.2MiB Select 1 1.69s 0.1% 1.69s 40.7MiB 0.1% 40.7MiB evaluation 1 791ms 0.1% 791ms 26.4MiB 0.1% 26.4MiB idx isa Vector 1 554ms 0.0% 554ms 10.1MiB 0.0% 10.1MiB idx isa Integer 1 344ms 0.0% 344ms 4.15MiB 0.0% 4.15MiB Periodic 1 1.27s 0.1% 1.27s 42.3MiB 0.1% 42.3MiB cross 1 32.5s 2.7% 32.5s 1.75GiB 4.9% 1.75GiB block arrays 1 18.0s 1.5% 18.0s 0.99GiB 2.8% 0.99GiB Stheno._collect ∘ _mortar 1 15.2s 1.2% 15.2s 862MiB 2.4% 862MiB BlockMatrix 1 7.84s 0.6% 7.84s 475MiB 1.3% 475MiB adj_fd 1 977ms 0.1% 977ms 136MiB 0.4% 136MiB adj_ad 1 65.0ms 0.0% 65.0ms 2.80MiB 0.0% 2.80MiB BlockVector 1 7.32s 0.6% 7.32s 387MiB 1.1% 387MiB adj_fd 1 825ms 0.1% 825ms 17.8MiB 0.0% 17.8MiB adj_ad 1 281ms 0.0% 281ms 20.5MiB 0.1% 20.5MiB fdm stuff 1 2.81s 0.2% 2.81s 155MiB 0.4% 155MiB Correctness tests 1 9.07s 0.7% 9.07s 551MiB 1.5% 551MiB Standardised Tests 1 5.48s 0.5% 5.48s 221MiB 0.6% 221MiB gp 1 206s 17.0% 206s 6.15GiB 17.4% 6.15GiB adj_ad 2 21.8s 1.8% 10.9s 1.06GiB 3.0% 544MiB sparse gp 1 20.7s 1.7% 20.7s 524MiB 1.4% 524MiB SparseFiniteGP inference 1 14.9s 1.2% 14.9s 339MiB 0.9% 339MiB SparseFiniteGP methods 1 5.37s 0.4% 5.37s 178MiB 0.5% 178MiB SparseFiniteGP Constructors 1 410ms 0.0% 410ms 5.27MiB 0.0% 5.27MiB gp 1 19.0s 1.6% 19.0s 552MiB 1.5% 552MiB GP 1 18.7s 1.5% 18.7s 549MiB 1.5% 549MiB independent GPs 1 343ms 0.0% 343ms 3.34MiB 0.0% 3.34MiB wrapped AbstractGP 1 13.8ms 0.0% 13.8ms 374KiB 0.0% 374KiB adj_fd 2 5.35s 0.4% 2.68s 169MiB 0.5% 84.7MiB derived_gp 1 205μs 0.0% 205μs 2.06KiB 0.0% 2.06KiB gaussian_process_probabilistic_programme 1 148s 12.2% 148s 2.88GiB 8.2% 2.88GiB Zygote 1 31.5s 2.6% 31.5s 1.19GiB 3.4% 1.19GiB External Consistency 1 15.5s 1.3% 15.5s 135MiB 0.4% 135MiB nested gppp 1 15.4s 1.3% 15.4s 99.2MiB 0.3% 99.2MiB split 1 693ms 0.1% 693ms 15.3MiB 0.0% 15.3MiB gppp macro 1 64.6ms 0.0% 64.6ms 748KiB 0.0% 748KiB doctests 1 72.9s 6.0% 72.9s 2.22GiB 6.3% 2.22GiB BlockData 1 6.73s 0.6% 6.73s 295MiB 0.8% 295MiB vcat(::GPPPInput...) 1 1.62s 0.1% 1.62s 103MiB 0.3% 103MiB ───────────────────────────────────────────────────────────────────────────────────────────────────── Testing Stheno tests passed Testing completed after 1357.2s PkgEval succeeded after 1470.63s