Package evaluation to test MoleculeView on Julia 1.14.0-DEV.65 (b05afe0f25*) started at 2025-11-12T07:35:13.559 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 10.3s ################################################################################ # Installation # Installing MoleculeView... Resolving package versions... Installed Libuuid_jll ────────────────────── v2.41.2+0 Installed ChunkCodecLibZstd ──────────────── v1.0.0 Installed libaom_jll ─────────────────────── v3.13.1+0 Installed ImageIO ────────────────────────── v0.6.9 Installed MosaicViews ────────────────────── v0.3.4 Installed libass_jll ─────────────────────── v0.17.4+0 Installed CommonWorldInvalidations ───────── v1.0.0 Installed PolygonOps ─────────────────────── v0.1.2 Installed MKL_jll ────────────────────────── v2025.2.0+0 Installed HarfBuzz_jll ───────────────────── v8.5.1+0 Installed Libtiff_jll ────────────────────── v4.7.2+0 Installed Bzip2_jll ──────────────────────── v1.0.9+0 Installed InlineStrings ──────────────────── v1.4.5 Installed Extents ────────────────────────── v0.1.6 Installed ImageMagick ────────────────────── v1.4.2 Installed NearestNeighbors ───────────────── v0.4.22 Installed Graphite2_jll ──────────────────── v1.3.15+0 Installed Cairo_jll ──────────────────────── v1.18.5+0 Installed UnsafePointers ─────────────────── v1.0.0 Installed SIMDTypes ──────────────────────── v0.1.0 Installed OrderedCollections ─────────────── v1.8.1 Installed SimpleWeightedGraphs ───────────── v1.5.0 Installed CondaPkg ───────────────────────── v0.2.33 Installed CpuId ──────────────────────────── v0.3.1 Installed Fontconfig_jll ─────────────────── v2.17.1+0 Installed CustomUnitRanges ───────────────── v1.0.2 Installed SentinelArrays ─────────────────── v1.4.8 Installed Giflib_jll ─────────────────────── v5.2.3+0 Installed Distances ──────────────────────── v0.10.12 Installed HistogramThresholding ──────────── v0.3.1 Installed StaticArrayInterface ───────────── v1.8.0 Installed NaNMath ────────────────────────── v1.1.3 Installed OpenSpecFun_jll ────────────────── v0.5.6+0 Installed QuadGK ─────────────────────────── v2.11.2 Installed FileIO ─────────────────────────── v1.17.1 Installed Opus_jll ───────────────────────── v1.5.2+0 Installed Pidfile ────────────────────────── v1.3.0 Installed Graphics ───────────────────────── v1.1.3 Installed AdaptivePredicates ─────────────── v1.2.0 Installed ScopedValues ───────────────────── v1.5.0 Installed Ogg_jll ────────────────────────── v1.3.6+0 Installed WoodburyMatrices ───────────────── v1.0.0 Installed Xorg_libxcb_jll ────────────────── v1.17.1+0 Installed EnumX ──────────────────────────── v1.0.5 Installed Tables ─────────────────────────── v1.12.1 Installed MsgPack ────────────────────────── v1.2.1 Installed InverseFunctions ───────────────── v0.1.17 Installed LZO_jll ────────────────────────── v2.10.3+0 Installed Reexport ───────────────────────── v1.2.2 Installed Hyperscript ────────────────────── v0.0.5 Installed Missings ───────────────────────── v1.2.0 Installed LERC_jll ───────────────────────── v4.0.1+0 Installed Static ─────────────────────────── v1.3.1 Installed Preferences ────────────────────── v1.5.0 Installed RegionTrees ────────────────────── v0.3.2 Installed LLVMOpenMP_jll ─────────────────── v18.1.8+0 Installed TableTraits ────────────────────── v1.0.1 Installed Imath_jll ──────────────────────── v3.1.11+0 Installed LaTeXStrings ───────────────────── v1.4.0 Installed MappedArrays ───────────────────── v0.4.2 Installed Crayons ────────────────────────── v4.1.1 Installed SortingAlgorithms ──────────────── v1.2.2 Installed Polynomials ────────────────────── v4.0.21 Installed Grisu ──────────────────────────── v1.0.2 Installed RangeArrays ────────────────────── v0.3.2 Installed CRlibm ─────────────────────────── v1.0.2 Installed UnPack ─────────────────────────── v1.0.2 Installed Format ─────────────────────────── v1.3.7 Installed Inflate ────────────────────────── v0.1.5 Installed DataStructures ─────────────────── v0.19.3 Installed ManualMemory ───────────────────── v0.1.8 Installed MacroTools ─────────────────────── v0.5.16 Installed ColorBrewer ────────────────────── v0.4.2 Installed URIs ───────────────────────────── v1.6.1 Installed FillArrays ─────────────────────── v1.15.0 Installed Quaternions ────────────────────── v0.7.6 Installed OpenEXR_jll ────────────────────── v3.2.4+0 Installed Packing ────────────────────────── v0.5.1 Installed MakieCore ──────────────────────── v0.8.12 Installed AbstractTrees ──────────────────── v0.4.5 Installed ArnoldiMethod ──────────────────── v0.4.0 Installed LazyModules ────────────────────── v0.3.1 Installed VectorizationBase ──────────────── v0.21.72 Installed oneTBB_jll ─────────────────────── v2022.0.0+1 Installed x264_jll ───────────────────────── v10164.0.1+0 Installed UnicodeFun ─────────────────────── v0.4.1 Installed MathTeXEngine ──────────────────── v0.6.7 Installed micromamba_jll ─────────────────── v1.5.12+0 Installed CodecZlib ──────────────────────── v0.7.8 Installed Observables ────────────────────── v0.5.5 Installed StatsBase ──────────────────────── v0.34.8 Installed Xorg_libXau_jll ────────────────── v1.0.13+0 Installed HostCPUFeatures ────────────────── v0.1.17 Installed ArrayInterface ─────────────────── v7.22.0 Installed IntelOpenMP_jll ────────────────── v2025.2.0+0 Installed CEnum ──────────────────────────── v0.5.0 Installed DataValueInterfaces ────────────── v1.0.0 Installed LoggingExtras ──────────────────── v1.2.0 Installed Libffi_jll ─────────────────────── v3.4.7+0 Installed Pixman_jll ─────────────────────── v0.44.2+0 Installed LayoutPointers ─────────────────── v0.1.17 Installed Expat_jll ──────────────────────── v2.7.3+0 Installed RealDot ────────────────────────── v0.1.0 Installed IrrationalConstants ────────────── v0.2.6 Installed StructUtils ────────────────────── v2.6.0 Installed Clustering ─────────────────────── v0.15.8 Installed libzip_jll ─────────────────────── v1.11.3+0 Installed libpng_jll ─────────────────────── v1.6.50+0 Installed isoband_jll ────────────────────── v0.2.3+0 Installed Contour ────────────────────────── v0.6.3 Installed ImageTransformations ───────────── v0.10.2 Installed SimpleTraits ───────────────────── v0.9.5 Installed RoundingEmulator ───────────────── v0.2.1 Installed HTTP ───────────────────────────── v1.10.19 Installed ColorVectorSpace ───────────────── v0.10.0 Installed Interpolations ─────────────────── v0.15.1 Installed ImageMetadata ──────────────────── v0.9.10 Installed StableRNGs ─────────────────────── v1.0.4 Installed BitFlags ───────────────────────── v0.1.9 Installed ImageShow ──────────────────────── v0.3.8 Installed libfdk_aac_jll ─────────────────── v2.0.4+0 Installed MoleculeFlow ───────────────────── v0.6.0 Installed libsixel_jll ───────────────────── v1.10.5+0 Installed libwebp_jll ────────────────────── v1.6.0+0 Installed Scratch ────────────────────────── v1.3.0 Installed ImageBinarization ──────────────── v0.3.1 Installed FFMPEG_jll ─────────────────────── v6.1.3+0 Installed ImageMorphology ────────────────── v0.4.7 Installed MoleculeView ───────────────────── v0.3.0 Installed Setfield ───────────────────────── v1.1.2 Installed MetaGraphs ─────────────────────── v0.8.1 Installed SimpleBufferStream ─────────────── v1.2.0 Installed pixi_jll ───────────────────────── v0.41.3+0 Installed ShaderAbstractions ─────────────── v0.4.1 Installed PooledArrays ───────────────────── v1.4.3 Installed CRlibm_jll ─────────────────────── v1.0.1+0 Installed ImageMagick_jll ────────────────── v7.1.2005+0 Installed PDMats ─────────────────────────── v0.11.36 Installed AxisArrays ─────────────────────── v0.4.8 Installed ImageCore ──────────────────────── v0.10.5 Installed PNGFiles ───────────────────────── v0.4.4 Installed FFTViews ───────────────────────── v0.3.2 Installed DocStringExtensions ────────────── v0.9.5 Installed PythonCall ─────────────────────── v0.9.28 Installed JpegTurbo ──────────────────────── v0.1.6 Installed Rmath_jll ──────────────────────── v0.5.1+0 Installed OpenBLASConsistentFPCSR_jll ────── v0.3.29+0 Installed FreeType ───────────────────────── v4.1.1 Installed OpenJpeg_jll ───────────────────── v2.5.5+0 Installed PkgVersion ─────────────────────── v0.3.3 Installed StackViews ─────────────────────── v0.1.2 Installed RelocatableFolders ─────────────── v1.0.1 Installed Ghostscript_jll ────────────────── v9.55.1+0 Installed KernelDensity ──────────────────── v0.6.10 Installed SLEEFPirates ───────────────────── v0.6.43 Installed TiledIteration ─────────────────── v0.5.0 Installed ConcurrentUtilities ────────────── v2.5.0 Installed BitTwiddlingConvenienceFunctions ─ v0.1.6 Installed AliasTables ────────────────────── v1.1.3 Installed HashArrayMappedTries ───────────── v0.2.0 Installed IteratorInterfaceExtensions ────── v1.0.0 Installed SIMD ───────────────────────────── v3.7.2 Installed RecipesBase ────────────────────── v1.3.4 Installed DataAPI ────────────────────────── v1.16.0 Installed InvertedIndices ────────────────── v1.3.1 Installed ImageDistances ─────────────────── v0.2.17 Installed Netpbm ─────────────────────────── v1.1.1 Installed ImageQualityIndexes ────────────── v0.3.7 Installed ImageAxes ──────────────────────── v0.6.12 Installed StaticArrays ───────────────────── v1.9.15 Installed Colors ─────────────────────────── v0.13.1 Installed StaticArraysCore ───────────────── v1.4.4 Installed ThreadPools ────────────────────── v2.1.1 Installed WidgetsBase ────────────────────── v0.1.4 Installed Libglvnd_jll ───────────────────── v1.7.1+1 Installed AbstractFFTs ───────────────────── v1.5.0 Installed ColorTypes ─────────────────────── v0.11.5 Installed AxisAlgorithms ─────────────────── v1.1.0 Installed SciMLPublic ────────────────────── v1.0.0 Installed QOI ────────────────────────────── v1.0.1 Installed StringManipulation ─────────────── v0.4.1 Installed Requires ───────────────────────── v1.3.1 Installed Glib_jll ───────────────────────── v2.86.0+0 Installed BaseDirs ───────────────────────── v1.3.2 Installed LogExpFunctions ────────────────── v0.3.29 Installed JSON ───────────────────────────── v1.2.1 Installed ColorSchemes ───────────────────── v3.31.0 Installed FreeTypeAbstraction ────────────── v0.10.8 Installed PrettyTables ───────────────────── v3.1.0 Installed Rmath ──────────────────────────── v0.9.0 Installed Distributions ──────────────────── v0.25.122 Installed Parsers ────────────────────────── v2.8.3 Installed FilePaths ──────────────────────── v0.8.3 Installed GeoFormatTypes ─────────────────── v0.4.5 Installed CloseOpenIntervals ─────────────── v0.1.13 Installed StatsFuns ──────────────────────── v1.5.2 Installed GridLayoutBase ─────────────────── v0.11.2 Installed Unitful ────────────────────────── v1.25.1 Installed OpenEXR ────────────────────────── v0.3.3 Installed Xorg_libXdmcp_jll ──────────────── v1.1.6+0 Installed SignedDistanceFields ───────────── v0.4.0 Installed Bonito ─────────────────────────── v4.1.11 Installed JLLWrappers ────────────────────── v1.7.1 Installed Deno_jll ───────────────────────── v1.33.4+0 Installed XZ_jll ─────────────────────────── v5.8.1+0 Installed GeometryBasics ─────────────────── v0.4.11 Installed ImageContrastAdjustment ────────── v0.3.12 Installed DataFrames ─────────────────────── v1.8.1 Installed x265_jll ───────────────────────── v4.1.0+0 Installed ChunkCodecCore ─────────────────── v1.0.0 Installed ExactPredicates ────────────────── v2.2.9 Installed StructTypes ────────────────────── v1.11.0 Installed IterTools ──────────────────────── v1.10.0 Installed ThreadingUtilities ─────────────── v0.5.5 Installed Xorg_xtrans_jll ────────────────── v1.6.0+0 Installed Graphs ─────────────────────────── v1.13.1 Installed TiffImages ─────────────────────── v0.11.6 Installed FilePathsBase ──────────────────── v0.9.24 Installed JpegTurbo_jll ──────────────────── v3.1.3+0 Installed PaddedViews ────────────────────── v0.5.12 Installed ImageCorners ───────────────────── v0.1.3 Installed JLD2 ───────────────────────────── v0.6.2 Installed Adapt ──────────────────────────── v4.4.0 Installed ConstructionBase ───────────────── v1.6.0 Installed HypergeometricFunctions ────────── v0.3.28 Installed TriplotBase ────────────────────── v0.1.0 Installed Libmount_jll ───────────────────── v2.41.2+0 Installed ExceptionUnwrapping ────────────── v0.1.11 Installed TranscodingStreams ─────────────── v0.11.3 Installed Compat ─────────────────────────── v4.18.1 Installed Sixel ──────────────────────────── v0.1.5 Installed Xorg_libX11_jll ────────────────── v1.8.12+0 Installed LoopVectorization ──────────────── v0.12.173 Installed PlotUtils ──────────────────────── v1.4.4 Installed TensorCore ─────────────────────── v0.1.1 Installed EarCut_jll ─────────────────────── v2.2.4+0 Installed Statistics ─────────────────────── v1.11.1 Installed ImageSegmentation ──────────────── v1.10.0 Installed ImageBase ──────────────────────── v0.1.7 Installed StatsAPI ───────────────────────── v1.7.1 Installed PrecompileTools ────────────────── v1.3.3 Installed StructArrays ───────────────────── v0.6.21 Installed OffsetArrays ───────────────────── v1.17.0 Installed ProgressMeter ──────────────────── v1.11.0 Installed MbedTLS ────────────────────────── v1.1.9 Installed OpenSSL ────────────────────────── v1.6.0 Installed WebP ───────────────────────────── v0.1.3 Installed ImageFiltering ─────────────────── v0.7.12 Installed CoordinateTransformations ──────── v0.6.4 Installed MicroMamba ─────────────────────── v0.1.14 Installed Ratios ─────────────────────────── v0.4.5 Installed Animations ─────────────────────── v0.4.2 Installed GettextRuntime_jll ─────────────── v0.22.4+0 Installed ChainRulesCore ─────────────────── v1.26.0 Installed CPUSummary ─────────────────────── v0.2.7 Installed FriBidi_jll ────────────────────── v1.0.17+0 Installed ChunkCodecLibZlib ──────────────── v1.0.0 Installed JSON3 ──────────────────────────── v1.14.3 Installed WGLMakie ───────────────────────── v0.10.18 Installed LAME_jll ───────────────────────── v3.100.3+0 Installed ComputationalResources ─────────── v0.3.2 Installed Xorg_libXrender_jll ────────────── v0.9.12+0 Installed Isoband ────────────────────────── v0.1.1 Installed Parameters ─────────────────────── v0.12.3 Installed IfElse ─────────────────────────── v0.1.1 Installed libvorbis_jll ──────────────────── v1.3.8+0 Installed IntervalArithmetic ─────────────── v1.0.1 Installed PtrArrays ──────────────────────── v1.3.0 Installed IntegralArrays ─────────────────── v0.1.6 Installed LittleCMS_jll ──────────────────── v2.17.0+0 Installed IntervalSets ───────────────────── v0.7.12 Installed SpecialFunctions ───────────────── v2.6.1 Installed Showoff ────────────────────────── v1.0.3 Installed FixedPointNumbers ──────────────── v0.8.5 Installed FreeType2_jll ──────────────────── v2.13.4+0 Installed FFTW ───────────────────────────── v1.10.0 Installed Rotations ──────────────────────── v1.7.1 Installed FFTW_jll ───────────────────────── v3.3.11+0 Installed Libiconv_jll ───────────────────── v1.18.0+0 Installed CatIndices ─────────────────────── v0.2.2 Installed MbedTLS_jll ────────────────────── v2.28.10+0 Installed Automa ─────────────────────────── v1.1.0 Installed IndirectArrays ─────────────────── v1.0.0 Installed Xorg_libXext_jll ───────────────── v1.3.7+0 Installed GeoInterface ───────────────────── v1.4.1 Installed Images ─────────────────────────── v0.26.2 Installed PolyesterWeave ─────────────────── v0.2.2 Installed Makie ──────────────────────────── v0.21.18 Installed DelaunayTriangulation ──────────── v1.6.5 Installing 59 artifacts Installed artifact Libffi 44.2 KiB Installed artifact LERC 272.9 KiB Installed artifact Fontconfig 984.8 KiB Installed artifact GettextRuntime 543.0 KiB Installed artifact libfdk_aac 2.8 MiB Installed artifact Ogg 250.3 KiB Installed artifact FreeType2 1.5 MiB Installed artifact x265 1.4 MiB Installed artifact OpenJpeg 421.8 KiB Installed artifact HarfBuzz 1.7 MiB Installed artifact JpegTurbo 1.4 MiB Installed artifact FriBidi 78.9 KiB Installed artifact XZ 1.5 MiB Installed artifact CRlibm 169.5 KiB Installed artifact x264 2.1 MiB Installed artifact Libtiff 2.3 MiB Installed artifact Xorg_xtrans 48.2 KiB Installed artifact Rmath 121.9 KiB Installed artifact libsixel 177.3 KiB Installed artifact libaom 6.4 MiB Installed artifact Expat 283.3 KiB Installed artifact libass 427.8 KiB Installed artifact MbedTLS 2.2 MiB Installed artifact LLVMOpenMP 661.6 KiB Installed artifact Xorg_libXrender 435.9 KiB Installed artifact Cairo 2.2 MiB Installed artifact Bzip2 503.5 KiB Installed artifact LAME 292.5 KiB Installed artifact libzip 177.6 KiB Installed artifact OpenEXR 1.9 MiB Installed artifact Imath 182.8 KiB Installed artifact Pixman 372.2 KiB Installed artifact Xorg_libxcb 2.1 MiB Installed artifact Libglvnd 833.5 KiB Installed artifact isoband 25.7 KiB Installed artifact EarCut 80.5 KiB Installed artifact Graphite2 120.2 KiB Installed artifact libwebp 2.6 MiB Installed artifact LZO 208.9 KiB Installed artifact Xorg_libXdmcp 67.7 KiB Installed artifact FFTW 2.2 MiB Installed artifact LittleCMS 752.2 KiB Installed artifact libvorbis 271.0 KiB Installed artifact Opus 925.5 KiB Installed artifact Giflib 154.6 KiB Installed artifact Xorg_libX11 13.9 MiB Installed artifact libpng 328.4 KiB Installed artifact OpenBLASConsistentFPCSR 9.9 MiB Installed artifact Libiconv 1.9 MiB Installed artifact Libmount 6.5 MiB Installed artifact FFMPEG 11.0 MiB Installed artifact Xorg_libXext 699.9 KiB Installed artifact Xorg_libXau 36.6 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact Glib 7.7 MiB Installed artifact Libuuid 3.7 MiB Installed artifact ImageMagick 9.3 MiB Installed artifact Ghostscript 31.4 MiB Installed artifact Deno 38.5 MiB Updating `~/.julia/environments/v1.14/Project.toml` [51e283bb] + MoleculeView v0.3.0 Updating `~/.julia/environments/v1.14/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [79e6a3ab] + Adapt v4.4.0 [35492f91] + AdaptivePredicates v1.2.0 [66dad0bd] + AliasTables v1.1.3 [27a7e980] + Animations v0.4.2 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.22.0 [67c07d97] + Automa v1.1.0 [13072b0f] + AxisAlgorithms v1.1.0 [39de3d68] + AxisArrays v0.4.8 [18cc8868] + BaseDirs v1.3.2 [d1d4a3ce] + BitFlags v0.1.9 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [824d6782] + Bonito v4.1.11 [fa961155] + CEnum v0.5.0 [2a0fbf3d] + CPUSummary v0.2.7 [96374032] + CRlibm v1.0.2 [aafaddc9] + CatIndices v0.2.2 [d360d2e6] + ChainRulesCore v1.26.0 [0b6fb165] + ChunkCodecCore v1.0.0 [4c0bbee4] + ChunkCodecLibZlib v1.0.0 [55437552] + ChunkCodecLibZstd v1.0.0 [fb6a15b2] + CloseOpenIntervals v0.1.13 [aaaa29a8] + Clustering v0.15.8 [944b1d66] + CodecZlib v0.7.8 [a2cac450] + ColorBrewer v0.4.2 [35d6a980] + ColorSchemes v3.31.0 ⌅ [3da002f7] + ColorTypes v0.11.5 ⌃ [c3611d14] + ColorVectorSpace v0.10.0 [5ae59095] + Colors v0.13.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [ed09eef8] + ComputationalResources v0.3.2 [f0e56b4a] + ConcurrentUtilities v2.5.0 [992eb4ea] + CondaPkg v0.2.33 [187b0558] + ConstructionBase v1.6.0 [d38c429a] + Contour v0.6.3 [150eb455] + CoordinateTransformations v0.6.4 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [dc8bdbbb] + CustomUnitRanges v1.0.2 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 [864edb3b] + DataStructures v0.19.3 [e2d170a0] + DataValueInterfaces v1.0.0 [927a84f5] + DelaunayTriangulation v1.6.5 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.122 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.5 [429591f6] + ExactPredicates v2.2.9 [460bff9d] + ExceptionUnwrapping v0.1.11 [411431e0] + Extents v0.1.6 [4f61f5a4] + FFTViews v0.3.2 [7a1cc6ca] + FFTW v1.10.0 [5789e2e9] + FileIO v1.17.1 ⌅ [8fc22ac5] + FilePaths v0.8.3 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.15.0 [53c48c17] + FixedPointNumbers v0.8.5 [1fa38f19] + Format v1.3.7 [b38be410] + FreeType v4.1.1 [663a7486] + FreeTypeAbstraction v0.10.8 [68eda718] + GeoFormatTypes v0.4.5 ⌃ [cf35fbd7] + GeoInterface v1.4.1 ⌅ [5c1252a2] + GeometryBasics v0.4.11 [a2bd30eb] + Graphics v1.1.3 [86223c79] + Graphs v1.13.1 [3955a311] + GridLayoutBase v0.11.2 [42e2da0e] + Grisu v1.0.2 [cd3eb016] + HTTP v1.10.19 [076d061b] + HashArrayMappedTries v0.2.0 [2c695a8d] + HistogramThresholding v0.3.1 [3e5b6fbb] + HostCPUFeatures v0.1.17 [34004b35] + HypergeometricFunctions v0.3.28 [47d2ed2b] + Hyperscript v0.0.5 [615f187c] + IfElse v0.1.1 [2803e5a7] + ImageAxes v0.6.12 [c817782e] + ImageBase v0.1.7 [cbc4b850] + ImageBinarization v0.3.1 [f332f351] + ImageContrastAdjustment v0.3.12 [a09fc81d] + ImageCore v0.10.5 [89d5987c] + ImageCorners v0.1.3 [51556ac3] + ImageDistances v0.2.17 [6a3955dd] + ImageFiltering v0.7.12 [82e4d734] + ImageIO v0.6.9 [6218d12a] + ImageMagick v1.4.2 [bc367c6b] + ImageMetadata v0.9.10 [787d08f9] + ImageMorphology v0.4.7 [2996bd0c] + ImageQualityIndexes v0.3.7 [80713f31] + ImageSegmentation v1.10.0 [4e3cecfd] + ImageShow v0.3.8 [02fcd773] + ImageTransformations v0.10.2 [916415d5] + Images v0.26.2 [9b13fd28] + IndirectArrays v1.0.0 [d25df0c9] + Inflate v0.1.5 [842dd82b] + InlineStrings v1.4.5 [1d092043] + IntegralArrays v0.1.6 ⌅ [a98d9a8b] + Interpolations v0.15.1 [d1acc4aa] + IntervalArithmetic v1.0.1 [8197267c] + IntervalSets v0.7.12 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [f1662d9f] + Isoband v0.1.1 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [033835bb] + JLD2 v0.6.2 [692b3bcd] + JLLWrappers v1.7.1 [682c06a0] + JSON v1.2.1 [0f8b85d8] + JSON3 v1.14.3 [b835a17e] + JpegTurbo v0.1.6 [5ab0869b] + KernelDensity v0.6.10 [b964fa9f] + LaTeXStrings v1.4.0 [10f19ff3] + LayoutPointers v0.1.17 [8cdb02fc] + LazyModules v0.3.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 [bdcacae8] + LoopVectorization v0.12.173 [1914dd2f] + MacroTools v0.5.16 ⌅ [ee78f7c6] + Makie v0.21.18 ⌅ [20f20a25] + MakieCore v0.8.12 [d125e4d3] + ManualMemory v0.1.8 [dbb5928d] + MappedArrays v0.4.2 [0a4f8689] + 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SimpleWeightedGraphs v1.5.0 [45858cf5] + Sixel v0.1.5 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [860ef19b] + StableRNGs v1.0.4 [cae243ae] + StackViews v0.1.2 [aedffcd0] + Static v1.3.1 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.8 [4c63d2b9] + StatsFuns v1.5.2 [892a3eda] + StringManipulation v0.4.1 ⌅ [09ab397b] + StructArrays v0.6.21 [856f2bd8] + StructTypes v1.11.0 [ec057cc2] + StructUtils v2.6.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [62fd8b95] + TensorCore v0.1.1 [b189fb0b] + ThreadPools v2.1.1 [8290d209] + ThreadingUtilities v0.5.5 [731e570b] + TiffImages v0.11.6 [06e1c1a7] + TiledIteration v0.5.0 [3bb67fe8] + TranscodingStreams v0.11.3 [981d1d27] + TriplotBase v0.1.0 [5c2747f8] + URIs v1.6.1 [3a884ed6] + UnPack v1.0.2 [1cfade01] + UnicodeFun v0.4.1 [1986cc42] + Unitful v1.25.1 [e17b2a0c] + UnsafePointers v1.0.0 [3d5dd08c] + VectorizationBase v0.21.72 ⌅ [276b4fcb] + WGLMakie v0.10.18 [e3aaa7dc] + WebP v0.1.3 [eead4739] + WidgetsBase v0.1.4 [efce3f68] + WoodburyMatrices v1.0.0 [6e34b625] + Bzip2_jll v1.0.9+0 [4e9b3aee] + CRlibm_jll v1.0.1+0 [83423d85] + Cairo_jll v1.18.5+0 ⌅ [04572ae6] + Deno_jll v1.33.4+0 [5ae413db] + EarCut_jll v2.2.4+0 [2e619515] + Expat_jll v2.7.3+0 ⌅ [b22a6f82] + FFMPEG_jll v6.1.3+0 [f5851436] + FFTW_jll v3.3.11+0 [a3f928ae] + Fontconfig_jll v2.17.1+0 [d7e528f0] + FreeType2_jll v2.13.4+0 [559328eb] + FriBidi_jll v1.0.17+0 [b0724c58] + GettextRuntime_jll v0.22.4+0 [61579ee1] + Ghostscript_jll v9.55.1+0 [59f7168a] + Giflib_jll v5.2.3+0 [7746bdde] + Glib_jll v2.86.0+0 [3b182d85] + Graphite2_jll v1.3.15+0 [2e76f6c2] + HarfBuzz_jll v8.5.1+0 [c73af94c] + ImageMagick_jll v7.1.2005+0 [905a6f67] + Imath_jll v3.1.11+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [aacddb02] + JpegTurbo_jll v3.1.3+0 [c1c5ebd0] + LAME_jll v3.100.3+0 [88015f11] + LERC_jll v4.0.1+0 [1d63c593] + LLVMOpenMP_jll v18.1.8+0 [dd4b983a] + LZO_jll v2.10.3+0 [e9f186c6] + Libffi_jll v3.4.7+0 [7e76a0d4] + Libglvnd_jll v1.7.1+1 [94ce4f54] + Libiconv_jll v1.18.0+0 [4b2f31a3] + Libmount_jll v2.41.2+0 [89763e89] + Libtiff_jll v4.7.2+0 [38a345b3] + Libuuid_jll v2.41.2+0 [d3a379c0] + LittleCMS_jll v2.17.0+0 [856f044c] + MKL_jll v2025.2.0+0 [c8ffd9c3] + MbedTLS_jll v2.28.10+0 [e7412a2a] + Ogg_jll v1.3.6+0 [6cdc7f73] + OpenBLASConsistentFPCSR_jll v0.3.29+0 [18a262bb] + OpenEXR_jll v3.2.4+0 [643b3616] + OpenJpeg_jll v2.5.5+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [91d4177d] + Opus_jll v1.5.2+0 ⌅ [30392449] + Pixman_jll v0.44.2+0 [f50d1b31] + Rmath_jll v0.5.1+0 [ffd25f8a] + XZ_jll v5.8.1+0 [4f6342f7] + Xorg_libX11_jll v1.8.12+0 [0c0b7dd1] + Xorg_libXau_jll v1.0.13+0 [a3789734] + Xorg_libXdmcp_jll v1.1.6+0 [1082639a] + Xorg_libXext_jll v1.3.7+0 [ea2f1a96] + Xorg_libXrender_jll v0.9.12+0 [c7cfdc94] + Xorg_libxcb_jll v1.17.1+0 [c5fb5394] + Xorg_xtrans_jll v1.6.0+0 [9a68df92] + isoband_jll v0.2.3+0 [a4ae2306] + libaom_jll v3.13.1+0 [0ac62f75] + libass_jll v0.17.4+0 [f638f0a6] + libfdk_aac_jll v2.0.4+0 [b53b4c65] + libpng_jll v1.6.50+0 [075b6546] + libsixel_jll v1.10.5+0 [f27f6e37] + libvorbis_jll v1.3.8+0 [c5f90fcd] + libwebp_jll v1.6.0+0 [337d8026] + libzip_jll v1.11.3+0 ⌅ [f8abcde7] + micromamba_jll v1.5.12+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [4d7b5844] + pixi_jll v0.41.3+0 [1270edf5] + x264_jll v10164.0.1+0 [dfaa095f] + x265_jll v4.1.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [8bf52ea8] + CRC32c v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.16.0+0 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.68.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 32.85s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... WARNING: Imported binding Operations.project_rel_path was undeclared at import time during import to TestEnv. 4706.8 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. 1 dependency had output during precompilation: ┌ TestEnv │ WARNING: Imported binding Operations.project_rel_path was undeclared at import time during import to TestEnv. └ ┌ Error: Failed to use TestEnv.jl; test dependencies will not be precompiled │ exception = │ UndefVarError: `project_rel_path` not defined in `TestEnv` │ Suggestion: this global was defined as `Pkg.Operations.project_rel_path` but not assigned a value. │ Stacktrace: │ [1] get_test_dir(ctx::Pkg.Types.Context, pkgspec::PackageSpec) │ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:75 │ [2] test_dir_has_project_file │ @ ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:52 [inlined] │ [3] maybe_gen_project_override! │ @ ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:83 [inlined] │ [4] activate(pkg::String; allow_reresolve::Bool) │ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:12 │ [5] activate(pkg::String) │ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:9 │ [6] top-level scope │ @ /PkgEval.jl/scripts/precompile.jl:24 │ [7] include(mod::Module, _path::String) │ @ Base ./Base.jl:309 │ [8] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:344 │ [9] _start() │ @ Base ./client.jl:577 └ @ Main /PkgEval.jl/scripts/precompile.jl:26 Precompiling package dependencies... Precompiling packages... 4438.8 ms ✓ MacroTools 1698.7 ms ✓ InlineStrings 812.4 ms ✓ Reexport 974.1 ms ✓ MappedArrays 888.5 ms ✓ TensorCore 1154.1 ms ✓ ConstructionBase 2117.0 ms ✓ IrrationalConstants 767.8 ms ✓ DataValueInterfaces 830.5 ms ✓ StatsAPI 2449.1 ms ✓ Format 1113.0 ms ✓ Observables 977.5 ms ✓ RoundingEmulator 824.1 ms ✓ PolygonOps 1182.6 ms ✓ IterTools 1054.8 ms ✓ IntervalSets 875.0 ms ✓ CEnum 1031.0 ms ✓ Inflate 921.1 ms ✓ Contour 1269.2 ms ✓ TranscodingStreams 882.0 ms ✓ LaTeXStrings 1067.1 ms ✓ ChunkCodecCore 1130.8 ms ✓ Statistics 1026.2 ms ✓ StaticArraysCore 992.0 ms ✓ StableRNGs 2943.4 ms ✓ AdaptivePredicates 833.3 ms ✓ IfElse 1110.3 ms ✓ GeoFormatTypes 909.9 ms ✓ PtrArrays 829.5 ms ✓ SimpleBufferStream 1226.0 ms ✓ Grisu 907.2 ms ✓ ManualMemory 913.3 ms ✓ DataAPI 908.6 ms ✓ SciMLPublic 800.9 ms ✓ RealDot 788.4 ms ✓ CommonWorldInvalidations 1243.4 ms ✓ URIs 863.9 ms ✓ InvertedIndices 822.0 ms ✓ CustomUnitRanges 1013.8 ms ✓ LazyModules 983.0 ms ✓ InverseFunctions 921.5 ms ✓ BitFlags 1138.5 ms ✓ AbstractTrees 1070.0 ms ✓ AbstractFFTs 912.2 ms ✓ EnumX 1078.0 ms ✓ ComputationalResources 2483.3 ms ✓ FillArrays 966.4 ms ✓ TriplotBase 863.7 ms ✓ IndirectArrays 798.8 ms ✓ UnPack 868.7 ms ✓ UnsafePointers 1002.5 ms ✓ Extents 786.9 ms ✓ RangeArrays 1225.8 ms ✓ OrderedCollections 932.7 ms ✓ HashArrayMappedTries 1113.2 ms ✓ DocStringExtensions 5083.6 ms ✓ BaseDirs 1697.5 ms ✓ OffsetArrays 789.0 ms ✓ SIMDTypes 793.9 ms ✓ IteratorInterfaceExtensions 2187.8 ms ✓ Crayons 1042.8 ms ✓ NaNMath 1171.3 ms ✓ Requires 2062.9 ms ✓ ConcurrentUtilities 1236.8 ms ✓ SuiteSparse 1540.2 ms ✓ MsgPack 1830.9 ms ✓ CpuId 1430.1 ms ✓ WoodburyMatrices 936.1 ms ✓ Scratch 34953.8 ms ✓ Unitful 3272.4 ms ✓ SentinelArrays 1640.5 ms ✓ StructTypes 1096.4 ms ✓ LoggingExtras 1475.2 ms ✓ StructUtils 1848.2 ms ✓ ProgressMeter 3495.9 ms ✓ UnicodeFun 1237.1 ms ✓ Compat 1206.1 ms ✓ Preferences 1072.8 ms ✓ Pidfile 1240.1 ms ✓ Hyperscript 1596.8 ms ✓ ExceptionUnwrapping 4447.8 ms ✓ PkgVersion 3539.2 ms ✓ SimpleTraits 882.6 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 995.3 ms ✓ WidgetsBase 765.6 ms ✓ IntervalSets → IntervalSetsRandomExt 811.8 ms ✓ IntervalSets → IntervalSetsPrintfExt 800.3 ms ✓ ConstructionBase → ConstructionBaseIntervalSetsExt 998.7 ms ✓ CodecZlib 1030.9 ms ✓ ChunkCodecLibZlib 1136.8 ms ✓ ChunkCodecLibZstd 821.1 ms ✓ SignedDistanceFields 1246.5 ms ✓ Statistics → SparseArraysExt 4040.3 ms ✓ FixedPointNumbers 1459.8 ms ✓ Distances 761.0 ms ✓ IntervalSets → IntervalSetsStatisticsExt 969.6 ms ✓ AliasTables 893.0 ms ✓ Showoff 1807.8 ms ✓ ThreadingUtilities 1010.3 ms ✓ Missings 1030.2 ms ✓ PooledArrays 1081.7 ms ✓ Quaternions 879.0 ms ✓ InverseFunctions → InverseFunctionsDatesExt 1663.6 ms ✓ InverseFunctions → InverseFunctionsTestExt 4135.0 ms ✓ OpenSSL 4296.3 ms ✓ AbstractFFTs → AbstractFFTsTestExt 1643.8 ms ✓ FillArrays → FillArraysSparseArraysExt 996.7 ms ✓ FillArrays → FillArraysStatisticsExt 1933.3 ms ✓ GeoInterface 950.2 ms ✓ Parameters 3592.5 ms ✓ DataStructures 878.1 ms ✓ ScopedValues 1660.5 ms ✓ LogExpFunctions 917.9 ms ✓ PaddedViews 878.9 ms ✓ StackViews 875.6 ms ✓ CatIndices 763.0 ms ✓ TableTraits 861.7 ms ✓ Ratios 1012.4 ms ✓ Adapt 9699.1 ms ✓ FileIO 1893.9 ms ✓ PDMats 1371.1 ms ✓ AxisAlgorithms 1122.6 ms ✓ RelocatableFolders 2082.7 ms ✓ Unitful → ConstructionBaseUnitfulExt 2348.7 ms ✓ Unitful → PrintfExt 2030.5 ms ✓ Unitful → InverseFunctionsUnitfulExt 840.2 ms ✓ Compat → CompatLinearAlgebraExt 923.3 ms ✓ PrecompileTools 1214.7 ms ✓ JLLWrappers 3107.2 ms ✓ Setfield 1537.6 ms ✓ AxisArrays 4684.4 ms ✓ ColorTypes 1298.6 ms ✓ Distances → DistancesSparseArraysExt 1073.7 ms ✓ SortingAlgorithms 2427.0 ms ✓ QuadGK 823.9 ms ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt 1010.6 ms ✓ MosaicViews 1787.5 ms ✓ Tables 924.0 ms ✓ Ratios → RatiosFixedPointNumbersExt 1168.2 ms ✓ ArrayInterface 1256.8 ms ✓ Adapt → AdaptSparseArraysExt 840.1 ms ✓ OffsetArrays → OffsetArraysAdaptExt 1447.6 ms ✓ FillArrays → FillArraysPDMatsExt 2728.5 ms ✓ ChainRulesCore 2143.7 ms ✓ FilePathsBase 3256.2 ms ✓ StringManipulation 18263.7 ms ✓ SIMD 14285.7 ms ✓ StaticArrays 2950.5 ms ✓ RecipesBase 17827.2 ms ✓ Parsers 6269.0 ms ✓ Static 50742.9 ms ✓ JLD2 1451.9 ms ✓ Libffi_jll 1466.9 ms ✓ LZO_jll 1429.5 ms ✓ EarCut_jll 1515.2 ms ✓ Bzip2_jll 1442.1 ms ✓ OpenBLASConsistentFPCSR_jll 1423.9 ms ✓ isoband_jll 1509.4 ms ✓ XZ_jll 1480.1 ms ✓ Rmath_jll 1464.2 ms ✓ OpenSpecFun_jll 1231.7 ms ✓ Xorg_xtrans_jll 1438.3 ms ✓ Opus_jll 5260.5 ms ✓ IntelOpenMP_jll 1426.0 ms ✓ x265_jll 1457.9 ms ✓ libpng_jll 5157.9 ms ✓ micromamba_jll 1368.7 ms ✓ CRlibm_jll 5210.0 ms ✓ oneTBB_jll 1391.2 ms ✓ Imath_jll 1456.0 ms ✓ Libmount_jll 1486.4 ms ✓ libfdk_aac_jll 1659.1 ms ✓ Libuuid_jll 1464.2 ms ✓ Deno_jll 1439.1 ms ✓ FriBidi_jll 1415.7 ms ✓ LERC_jll 1676.8 ms ✓ Xorg_libXau_jll 1493.3 ms ✓ Ogg_jll 1633.7 ms ✓ FFTW_jll 1671.1 ms ✓ LAME_jll 1555.6 ms ✓ Graphite2_jll 1468.4 ms ✓ x264_jll 1392.2 ms ✓ LLVMOpenMP_jll 5296.2 ms ✓ pixi_jll 1427.7 ms ✓ Libiconv_jll 1421.7 ms ✓ MbedTLS_jll 1555.6 ms ✓ libaom_jll 1462.0 ms ✓ Xorg_libXdmcp_jll 1455.9 ms ✓ Giflib_jll 1474.8 ms ✓ Expat_jll 1521.6 ms ✓ JpegTurbo_jll 1326.7 ms ✓ IntegralArrays 8417.7 ms ✓ Colors 4187.9 ms ✓ ColorVectorSpace 5945.4 ms ✓ QOI 4737.2 ms ✓ StatsBase 1607.3 ms ✓ StructArrays 872.1 ms ✓ StructUtils → StructUtilsTablesExt 771.5 ms ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 1252.7 ms ✓ ArrayInterface → ArrayInterfaceSparseArraysExt 1424.2 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 946.8 ms ✓ AbstractFFTs → AbstractFFTsChainRulesCoreExt 904.8 ms ✓ Distances → DistancesChainRulesCoreExt 3431.4 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 874.4 ms ✓ ArrayInterface → ArrayInterfaceChainRulesCoreExt 2727.9 ms ✓ FilePathsBase → FilePathsBaseTestExt 969.6 ms ✓ FilePathsBase → FilePathsBaseMmapExt 1354.6 ms ✓ FilePaths 41970.9 ms ✓ PrettyTables 23570.5 ms ✓ Automa 57111.2 ms ✓ TiffImages 4070.2 ms ✓ ArnoldiMethod 3406.3 ms ✓ CoordinateTransformations 1477.2 ms ✓ StaticArrays → StaticArraysStatisticsExt 1503.5 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 1484.7 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 1583.5 ms ✓ RegionTrees 5161.1 ms ✓ Rotations 1403.7 ms ✓ Adapt → AdaptStaticArraysExt 2207.1 ms ✓ ThreadPools 1328.1 ms ✓ IntervalSets → IntervalSetsRecipesBaseExt 42054.7 ms ✓ Polynomials 15029.5 ms ✓ JSON3 7607.1 ms ✓ JSON 962.2 ms ✓ InlineStrings → ParsersExt 965.3 ms ✓ BitTwiddlingConvenienceFunctions 2631.6 ms ✓ CPUSummary 16321.7 ms ✓ StaticArrayInterface 6388.6 ms ✓ JLD2 → UnPackExt 1582.1 ms ✓ FreeType2_jll 942.1 ms ✓ Isoband 1458.5 ms ✓ libzip_jll 1537.6 ms ✓ Rmath 5201.9 ms ✓ SpecialFunctions  Downloading artifact: micromamba 6455.2 ms ✓ MicroMamba 1210.2 ms ✓ CRlibm  Downloading artifact: IntelOpenMP  Downloading artifact: oneTBB 10182.4 ms ✓ MKL_jll 1453.1 ms ✓ OpenEXR_jll 1428.5 ms ✓ libvorbis_jll 1440.5 ms ✓ Pixman_jll 1490.5 ms ✓ GettextRuntime_jll 2145.7 ms ✓ MbedTLS 1511.0 ms ✓ Xorg_libxcb_jll 1576.7 ms ✓ Ghostscript_jll 1537.2 ms ✓ Libtiff_jll 1445.9 ms ✓ libsixel_jll 1428.6 ms ✓ Animations 1402.5 ms ✓ Graphics 33441.4 ms ✓ ImageCore 9042.5 ms ✓ ColorSchemes 1464.9 ms ✓ PDMats → StatsBaseExt 1329.8 ms ✓ StructArrays → StructArraysSparseArraysExt 888.7 ms ✓ StructArrays → StructArraysLinearAlgebraExt 832.4 ms ✓ StructArrays → StructArraysAdaptExt 1624.6 ms ✓ StructArrays → StructArraysStaticArraysExt 97739.7 ms ✓ DataFrames 4590.3 ms ✓ NearestNeighbors 10105.4 ms ✓ Graphs 1996.4 ms ✓ Rotations → RotationsRecipesBaseExt 4587.8 ms ✓ Interpolations 3404.0 ms ✓ Polynomials → PolynomialsChainRulesCoreExt 4567.9 ms ✓ ColorBrewer 1720.6 ms ✓ HostCPUFeatures 1723.1 ms ✓ PolyesterWeave 1067.4 ms ✓ StaticArrayInterface → StaticArrayInterfaceOffsetArraysExt 1529.0 ms ✓ StaticArrayInterface → StaticArrayInterfaceStaticArraysExt 1162.7 ms ✓ CloseOpenIntervals 1313.8 ms ✓ LayoutPointers 1716.7 ms ✓ FreeType 1575.3 ms ✓ Fontconfig_jll 4092.4 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 2513.2 ms ✓ HypergeometricFunctions 1371.0 ms ✓ ColorVectorSpace → SpecialFunctionsExt  Downloading artifact: pixi 10070.2 ms ✓ CondaPkg 5456.9 ms ✓ IntervalArithmetic 7546.8 ms ✓ FFTW 5782.1 ms ✓ OpenEXR 1577.4 ms ✓ Glib_jll 27917.5 ms ✓ HTTP 1533.5 ms ✓ Xorg_libX11_jll 1519.9 ms ✓ LittleCMS_jll 4287.0 ms ✓ ImageBase 7738.3 ms ✓ PNGFiles 11229.3 ms ✓ Sixel 9425.9 ms ✓ JpegTurbo 19001.4 ms ✓ PlotUtils 11301.8 ms ✓ GeometryBasics 4129.2 ms ✓ Clustering 9236.6 ms ✓ MetaGraphs 3422.1 ms ✓ SimpleWeightedGraphs 3418.4 ms ✓ Interpolations → InterpolationsUnitfulExt 1262.1 ms ✓ TiledIteration 16290.2 ms ✓ VectorizationBase 3312.4 ms ✓ StatsFuns 27809.7 ms ✓ PythonCall 1705.4 ms ✓ IntervalArithmetic → IntervalArithmeticSparseArraysExt 1520.8 ms ✓ IntervalArithmetic → IntervalArithmeticRecipesBaseExt 1584.0 ms ✓ IntervalArithmetic → IntervalArithmeticLinearAlgebraExt 1014.9 ms ✓ IntervalArithmetic → IntervalArithmeticIntervalSetsExt 1250.8 ms ✓ FFTViews 3483.5 ms ✓ Polynomials → PolynomialsFFTWExt 6542.7 ms ✓ FileIO → HTTPExt ERROR: LoadError: ArgumentError: Cannot load (`using/import`) module SHA into module Bonito in package Bonito because package Bonito does not have SHA in its dependencies: - Note that the following manifests in the load path were resolved with a potentially  different DEV version of the current version, which may be the cause of the error.  Try to re-resolve them in the current version, or consider deleting them if that fails:  /home/pkgeval/.julia/environments/v1.14/Manifest.toml - You may have a partially installed environment. Try `Pkg.instantiate()`  to ensure all packages in the environment are installed. - Or, if you have Bonito checked out for development and have  added SHA as a dependency but haven't updated your primary  environment's manifest file, try `Pkg.resolve()`. - Otherwise you may need to report an issue with Bonito Stacktrace:  [1] macro expansion  @ ./loading.jl:2491 [inlined]  [2] macro expansion  @ ./lock.jl:376 [inlined]  [3] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2471  [4] require  @ ./loading.jl:2447 [inlined]  [5] eval_import_path  @ ./module.jl:36 [inlined]  [6] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [7] _eval_using  @ ./module.jl:137 [inlined]  [8] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [9] top-level scope  @ ~/.julia/packages/Bonito/18mTs/src/Bonito.jl:18  [10] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [11] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3151  [12] top-level scope  @ stdin:5  [13] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [14] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2997  [15] include_string  @ ./loading.jl:3007 [inlined]  [16] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [17] _start()  @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/Bonito/18mTs/src/Bonito.jl:1 in expression starting at stdin:5 3 dependencies had output during precompilation: ┌ MKL_jll │ Downloading artifact: IntelOpenMP │ Downloading artifact: oneTBB └ ┌ CondaPkg │ Downloading artifact: pixi └ ┌ MicroMamba │ Downloading artifact: micromamba └ Precompilation completed after 1184.35s ################################################################################ # Testing # Testing MoleculeView Status `/tmp/jl_9IT3eE/Project.toml` [4c88cf16] Aqua v0.8.14 [336ed68f] CSV v0.10.15 [5ae59095] Colors v0.13.1 [a93c6f00] DataFrames v1.8.1 [5789e2e9] FileIO v1.17.1 [82e4d734] ImageIO v0.6.9 [0f8b85d8] JSON3 v1.14.3 [98e50ef6] JuliaFormatter v2.2.0 [0907176b] MoleculeFlow v0.6.0 [51e283bb] MoleculeView v0.3.0 [92933f4c] ProgressMeter v1.11.0 ⌅ [276b4fcb] WGLMakie v0.10.18 [2a0f44e3] Base64 v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_9IT3eE/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [79e6a3ab] Adapt v4.4.0 [35492f91] AdaptivePredicates v1.2.0 [66dad0bd] AliasTables v1.1.3 [27a7e980] Animations v0.4.2 [4c88cf16] Aqua v0.8.14 [ec485272] ArnoldiMethod v0.4.0 [4fba245c] ArrayInterface v7.22.0 [67c07d97] Automa v1.1.0 [13072b0f] AxisAlgorithms v1.1.0 [39de3d68] AxisArrays v0.4.8 [18cc8868] BaseDirs v1.3.2 [d1d4a3ce] BitFlags v0.1.9 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [824d6782] Bonito v4.1.11 [fa961155] CEnum v0.5.0 [2a0fbf3d] CPUSummary v0.2.7 [96374032] CRlibm v1.0.2 [336ed68f] CSV v0.10.15 [aafaddc9] CatIndices v0.2.2 [d360d2e6] ChainRulesCore v1.26.0 [0b6fb165] ChunkCodecCore v1.0.0 [4c0bbee4] ChunkCodecLibZlib v1.0.0 [55437552] ChunkCodecLibZstd v1.0.0 [fb6a15b2] CloseOpenIntervals v0.1.13 [aaaa29a8] Clustering v0.15.8 [944b1d66] CodecZlib v0.7.8 [a2cac450] ColorBrewer v0.4.2 [35d6a980] ColorSchemes v3.31.0 ⌅ [3da002f7] ColorTypes v0.11.5 ⌃ [c3611d14] ColorVectorSpace v0.10.0 [5ae59095] Colors v0.13.1 [a80b9123] CommonMark v0.9.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [ed09eef8] ComputationalResources v0.3.2 [f0e56b4a] ConcurrentUtilities v2.5.0 [992eb4ea] CondaPkg v0.2.33 [187b0558] ConstructionBase v1.6.0 [d38c429a] Contour v0.6.3 [150eb455] CoordinateTransformations v0.6.4 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [dc8bdbbb] CustomUnitRanges v1.0.2 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 [864edb3b] DataStructures v0.19.3 [e2d170a0] DataValueInterfaces v1.0.0 [927a84f5] DelaunayTriangulation v1.6.5 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.122 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.5 [429591f6] ExactPredicates v2.2.9 [460bff9d] ExceptionUnwrapping v0.1.11 [411431e0] Extents v0.1.6 [4f61f5a4] FFTViews v0.3.2 [7a1cc6ca] FFTW v1.10.0 [5789e2e9] FileIO v1.17.1 ⌅ [8fc22ac5] FilePaths v0.8.3 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.15.0 [53c48c17] FixedPointNumbers v0.8.5 [1fa38f19] Format v1.3.7 [b38be410] FreeType v4.1.1 [663a7486] FreeTypeAbstraction v0.10.8 [68eda718] GeoFormatTypes v0.4.5 ⌃ [cf35fbd7] GeoInterface v1.4.1 ⌅ [5c1252a2] GeometryBasics v0.4.11 [c27321d9] Glob v1.3.1 [a2bd30eb] Graphics v1.1.3 [86223c79] Graphs v1.13.1 [3955a311] GridLayoutBase v0.11.2 [42e2da0e] Grisu v1.0.2 [cd3eb016] HTTP v1.10.19 [076d061b] HashArrayMappedTries v0.2.0 [2c695a8d] HistogramThresholding v0.3.1 [3e5b6fbb] HostCPUFeatures v0.1.17 [34004b35] HypergeometricFunctions v0.3.28 [47d2ed2b] Hyperscript v0.0.5 [615f187c] IfElse v0.1.1 [2803e5a7] ImageAxes v0.6.12 [c817782e] ImageBase v0.1.7 [cbc4b850] ImageBinarization v0.3.1 [f332f351] ImageContrastAdjustment v0.3.12 [a09fc81d] ImageCore v0.10.5 [89d5987c] ImageCorners v0.1.3 [51556ac3] ImageDistances v0.2.17 [6a3955dd] ImageFiltering v0.7.12 [82e4d734] ImageIO v0.6.9 [6218d12a] ImageMagick v1.4.2 [bc367c6b] ImageMetadata v0.9.10 [787d08f9] ImageMorphology v0.4.7 [2996bd0c] ImageQualityIndexes v0.3.7 [80713f31] ImageSegmentation v1.10.0 [4e3cecfd] ImageShow v0.3.8 [02fcd773] ImageTransformations v0.10.2 [916415d5] Images v0.26.2 [9b13fd28] IndirectArrays v1.0.0 [d25df0c9] Inflate v0.1.5 [842dd82b] InlineStrings v1.4.5 [1d092043] IntegralArrays v0.1.6 ⌅ [a98d9a8b] Interpolations v0.15.1 [d1acc4aa] IntervalArithmetic v1.0.1 [8197267c] IntervalSets v0.7.12 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [f1662d9f] Isoband v0.1.1 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [033835bb] JLD2 v0.6.2 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v1.2.1 [0f8b85d8] JSON3 v1.14.3 [b835a17e] JpegTurbo v0.1.6 [98e50ef6] JuliaFormatter v2.2.0 ⌅ [70703baa] JuliaSyntax v0.4.10 [5ab0869b] KernelDensity v0.6.10 [b964fa9f] LaTeXStrings v1.4.0 [10f19ff3] LayoutPointers v0.1.17 [8cdb02fc] LazyModules v0.3.1 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.2.0 [bdcacae8] LoopVectorization v0.12.173 [1914dd2f] MacroTools v0.5.16 ⌅ [ee78f7c6] Makie v0.21.18 ⌅ [20f20a25] MakieCore v0.8.12 [d125e4d3] ManualMemory v0.1.8 [dbb5928d] MappedArrays v0.4.2 [0a4f8689] MathTeXEngine v0.6.7 [739be429] MbedTLS v1.1.9 [626554b9] MetaGraphs v0.8.1 [0b3b1443] MicroMamba v0.1.14 [e1d29d7a] Missings v1.2.0 [0907176b] MoleculeFlow v0.6.0 [51e283bb] MoleculeView v0.3.0 [e94cdb99] MosaicViews v0.3.4 [99f44e22] MsgPack v1.2.1 [77ba4419] NaNMath v1.1.3 [b8a86587] NearestNeighbors v0.4.22 [f09324ee] Netpbm v1.1.1 [510215fc] Observables v0.5.5 [6fe1bfb0] OffsetArrays v1.17.0 [52e1d378] OpenEXR v0.3.3 [4d8831e6] OpenSSL v1.6.0 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.36 [f57f5aa1] PNGFiles v0.4.4 [19eb6ba3] Packing v0.5.1 [5432bcbf] PaddedViews v0.5.12 [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.3 [fa939f87] Pidfile v1.3.0 [eebad327] PkgVersion v0.3.3 [995b91a9] PlotUtils v1.4.4 [1d0040c9] PolyesterWeave v0.2.2 [647866c9] PolygonOps v0.1.2 ⌃ [f27b6e38] Polynomials v4.0.21 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 [08abe8d2] PrettyTables v3.1.0 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.3.0 [6099a3de] PythonCall v0.9.28 [4b34888f] QOI v1.0.1 [1fd47b50] QuadGK v2.11.2 [94ee1d12] Quaternions v0.7.6 [b3c3ace0] RangeArrays v0.3.2 [c84ed2f1] Ratios v0.4.5 [c1ae055f] RealDot v0.1.0 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [dee08c22] RegionTrees v0.3.2 [05181044] RelocatableFolders v1.0.1 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [6038ab10] Rotations v1.7.1 [5eaf0fd0] RoundingEmulator v0.2.1 [fdea26ae] SIMD v3.7.2 [94e857df] SIMDTypes v0.1.0 [476501e8] SLEEFPirates v0.6.43 [431bcebd] SciMLPublic v1.0.0 [7e506255] ScopedValues v1.5.0 [6c6a2e73] Scratch v1.3.0 [91c51154] SentinelArrays v1.4.8 [efcf1570] Setfield v1.1.2 ⌅ [65257c39] ShaderAbstractions v0.4.1 [992d4aef] Showoff v1.0.3 [73760f76] SignedDistanceFields v0.4.0 [777ac1f9] SimpleBufferStream v1.2.0 [699a6c99] SimpleTraits v0.9.5 [47aef6b3] SimpleWeightedGraphs v1.5.0 [45858cf5] Sixel v0.1.5 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.6.1 [860ef19b] StableRNGs v1.0.4 [cae243ae] StackViews v0.1.2 [aedffcd0] Static v1.3.1 [0d7ed370] StaticArrayInterface v1.8.0 [90137ffa] StaticArrays v1.9.15 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.8 [4c63d2b9] StatsFuns v1.5.2 [892a3eda] StringManipulation v0.4.1 ⌅ [09ab397b] StructArrays v0.6.21 [856f2bd8] StructTypes v1.11.0 [ec057cc2] StructUtils v2.6.0 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [62fd8b95] TensorCore v0.1.1 [b189fb0b] ThreadPools v2.1.1 [8290d209] ThreadingUtilities v0.5.5 [731e570b] TiffImages v0.11.6 [06e1c1a7] TiledIteration v0.5.0 [3bb67fe8] TranscodingStreams v0.11.3 [981d1d27] TriplotBase v0.1.0 [5c2747f8] URIs v1.6.1 [3a884ed6] UnPack v1.0.2 [1cfade01] UnicodeFun v0.4.1 [1986cc42] Unitful v1.25.1 [e17b2a0c] UnsafePointers v1.0.0 [3d5dd08c] VectorizationBase v0.21.72 ⌅ [276b4fcb] WGLMakie v0.10.18 [ea10d353] WeakRefStrings v1.4.2 [e3aaa7dc] WebP v0.1.3 [eead4739] WidgetsBase v0.1.4 [efce3f68] WoodburyMatrices v1.0.0 [76eceee3] WorkerUtilities v1.6.1 [6e34b625] Bzip2_jll v1.0.9+0 [4e9b3aee] CRlibm_jll v1.0.1+0 [83423d85] Cairo_jll v1.18.5+0 ⌅ [04572ae6] Deno_jll v1.33.4+0 [5ae413db] EarCut_jll v2.2.4+0 [2e619515] Expat_jll v2.7.3+0 ⌅ [b22a6f82] FFMPEG_jll v6.1.3+0 [f5851436] FFTW_jll v3.3.11+0 [a3f928ae] Fontconfig_jll v2.17.1+0 [d7e528f0] FreeType2_jll v2.13.4+0 [559328eb] FriBidi_jll v1.0.17+0 [b0724c58] GettextRuntime_jll v0.22.4+0 [61579ee1] Ghostscript_jll v9.55.1+0 [59f7168a] Giflib_jll v5.2.3+0 [7746bdde] Glib_jll v2.86.0+0 [3b182d85] Graphite2_jll v1.3.15+0 [2e76f6c2] HarfBuzz_jll v8.5.1+0 [c73af94c] ImageMagick_jll v7.1.2005+0 [905a6f67] Imath_jll v3.1.11+0 [1d5cc7b8] IntelOpenMP_jll v2025.2.0+0 [aacddb02] JpegTurbo_jll v3.1.3+0 [c1c5ebd0] LAME_jll v3.100.3+0 [88015f11] LERC_jll v4.0.1+0 [1d63c593] LLVMOpenMP_jll v18.1.8+0 [dd4b983a] LZO_jll v2.10.3+0 [e9f186c6] Libffi_jll v3.4.7+0 [7e76a0d4] Libglvnd_jll v1.7.1+1 [94ce4f54] Libiconv_jll v1.18.0+0 [4b2f31a3] Libmount_jll v2.41.2+0 [89763e89] Libtiff_jll v4.7.2+0 [38a345b3] Libuuid_jll v2.41.2+0 [d3a379c0] LittleCMS_jll v2.17.0+0 [856f044c] MKL_jll v2025.2.0+0 [c8ffd9c3] MbedTLS_jll v2.28.10+0 [e7412a2a] Ogg_jll v1.3.6+0 [6cdc7f73] OpenBLASConsistentFPCSR_jll v0.3.29+0 [18a262bb] OpenEXR_jll v3.2.4+0 [643b3616] OpenJpeg_jll v2.5.5+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [91d4177d] Opus_jll v1.5.2+0 ⌅ [30392449] Pixman_jll v0.44.2+0 [f50d1b31] Rmath_jll v0.5.1+0 [ffd25f8a] XZ_jll v5.8.1+0 [4f6342f7] Xorg_libX11_jll v1.8.12+0 [0c0b7dd1] Xorg_libXau_jll v1.0.13+0 [a3789734] Xorg_libXdmcp_jll v1.1.6+0 [1082639a] Xorg_libXext_jll v1.3.7+0 [ea2f1a96] Xorg_libXrender_jll v0.9.12+0 [c7cfdc94] Xorg_libxcb_jll v1.17.1+0 [c5fb5394] Xorg_xtrans_jll v1.6.0+0 [9a68df92] isoband_jll v0.2.3+0 [a4ae2306] libaom_jll v3.13.1+0 [0ac62f75] libass_jll v0.17.4+0 [f638f0a6] libfdk_aac_jll v2.0.4+0 [b53b4c65] libpng_jll v1.6.50+0 [075b6546] libsixel_jll v1.10.5+0 [f27f6e37] libvorbis_jll v1.3.8+0 [c5f90fcd] libwebp_jll v1.6.0+0 [337d8026] libzip_jll v1.11.3+0 ⌅ [f8abcde7] micromamba_jll v1.5.12+0 [1317d2d5] oneTBB_jll v2022.0.0+1 [4d7b5844] pixi_jll v0.41.3+0 [1270edf5] x264_jll v10164.0.1+0 [dfaa095f] x265_jll v4.1.0+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [8bf52ea8] CRC32c v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.16.0+0 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.11.4 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.68.0+1 [3f19e933] p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... ERROR: LoadError: ArgumentError: Cannot load (`using/import`) module SHA into module Bonito in package Bonito because package Bonito does not have SHA in its dependencies: - Note that the following manifests in the load path were resolved with a potentially  different DEV version of the current version, which may be the cause of the error.  Try to re-resolve them in the current version, or consider deleting them if that fails:  /tmp/jl_9IT3eE/Manifest.toml - You may have a partially installed environment. Try `Pkg.instantiate()`  to ensure all packages in the environment are installed. - Or, if you have Bonito checked out for development and have  added SHA as a dependency but haven't updated your primary  environment's manifest file, try `Pkg.resolve()`. - Otherwise you may need to report an issue with Bonito Stacktrace:  [1] macro expansion  @ ./loading.jl:2491 [inlined]  [2] macro expansion  @ ./lock.jl:376 [inlined]  [3] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2471  [4] require  @ ./loading.jl:2447 [inlined]  [5] eval_import_path  @ ./module.jl:36 [inlined]  [6] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [7] _eval_using  @ ./module.jl:137 [inlined]  [8] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [9] top-level scope  @ ~/.julia/packages/Bonito/18mTs/src/Bonito.jl:18  [10] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [11] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3151  [12] top-level scope  @ stdin:5  [13] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [14] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2997  [15] include_string  @ ./loading.jl:3007 [inlined]  [16] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [17] _start()  @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/Bonito/18mTs/src/Bonito.jl:1 in expression starting at stdin:5  CondaPkg Found dependencies: /home/pkgeval/.julia/packages/CondaPkg/0UqYV/CondaPkg.toml  CondaPkg Found dependencies: /home/pkgeval/.julia/packages/MoleculeFlow/5xJwa/CondaPkg.toml  CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PythonCall/mkWc2/CondaPkg.toml  CondaPkg Resolving changes  + openssl  + python  + rdkit (pip)  + uv  CondaPkg Initialising pixi  │ /home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi  │ init  │ --format pixi  └ /tmp/jl_9IT3eE/.CondaPkg ✔ Created /tmp/jl_9IT3eE/.CondaPkg/pixi.toml  CondaPkg Wrote /tmp/jl_9IT3eE/.CondaPkg/pixi.toml  │ [dependencies]  │ openssl = ">=3, <3.6"  │ uv = ">=0.4"  │  │ [dependencies.python]  │ version = ">=3.9,<4"  │ build = "*cp*"  │ channel = "conda-forge"  │  │ [pypi-dependencies]  │ rdkit = "==2025.03.6"  │  │ [project]  │ name = ".CondaPkg"  │ description = "automatically generated by CondaPkg.jl"  │ platforms = ["linux-64"]  │ channel-priority = "strict"  └ channels = ["conda-forge"]  CondaPkg Installing packages  │ /home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi  │ install  └ --manifest-path /tmp/jl_9IT3eE/.CondaPkg/pixi.toml ✔ The default environment has been installed. 1 dependency had output during precompilation: ┌ MoleculeFlow │ [Output was shown above] └ ERROR: LoadError: ArgumentError: Cannot load (`using/import`) module SHA into module Bonito in package Bonito because package Bonito does not have SHA in its dependencies: - Note that the following manifests in the load path were resolved with a potentially  different DEV version of the current version, which may be the cause of the error.  Try to re-resolve them in the current version, or consider deleting them if that fails:  /tmp/jl_9IT3eE/Manifest.toml - You may have a partially installed environment. Try `Pkg.instantiate()`  to ensure all packages in the environment are installed. - Or, if you have Bonito checked out for development and have  added SHA as a dependency but haven't updated your primary  environment's manifest file, try `Pkg.resolve()`. - Otherwise you may need to report an issue with Bonito Stacktrace:  [1] macro expansion  @ ./loading.jl:2491 [inlined]  [2] macro expansion  @ ./lock.jl:376 [inlined]  [3] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2471  [4] require  @ ./loading.jl:2447 [inlined]  [5] eval_import_path  @ ./module.jl:36 [inlined]  [6] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [7] _eval_using  @ ./module.jl:137 [inlined]  [8] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [9] top-level scope  @ ~/.julia/packages/Bonito/18mTs/src/Bonito.jl:18  [10] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [11] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3151  [12] top-level scope  @ stdin:5  [13] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [14] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2997  [15] include_string  @ ./loading.jl:3007 [inlined]  [16] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [17] _start()  @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/Bonito/18mTs/src/Bonito.jl:1 in expression starting at stdin:5 ERROR: LoadError: ArgumentError: Cannot load (`using/import`) module SHA into module Bonito in package Bonito because package Bonito does not have SHA in its dependencies: - Note that the following manifests in the load path were resolved with a potentially  different DEV version of the current version, which may be the cause of the error.  Try to re-resolve them in the current version, or consider deleting them if that fails:  /tmp/jl_9IT3eE/Manifest.toml - You may have a partially installed environment. Try `Pkg.instantiate()`  to ensure all packages in the environment are installed. - Or, if you have Bonito checked out for development and have  added SHA as a dependency but haven't updated your primary  environment's manifest file, try `Pkg.resolve()`. - Otherwise you may need to report an issue with Bonito Stacktrace:  [1] macro expansion  @ ./loading.jl:2491 [inlined]  [2] macro expansion  @ ./lock.jl:376 [inlined]  [3] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2471  [4] require  @ ./loading.jl:2447 [inlined]  [5] eval_import_path  @ ./module.jl:36 [inlined]  [6] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [7] _eval_using  @ ./module.jl:137 [inlined]  [8] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [9] top-level scope  @ ~/.julia/packages/Bonito/18mTs/src/Bonito.jl:18  [10] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [11] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3151  [12] top-level scope  @ stdin:5  [13] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [14] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2997  [15] include_string  @ ./loading.jl:3007 [inlined]  [16] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [17] _start()  @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/Bonito/18mTs/src/Bonito.jl:1 in expression starting at stdin:5 1 dependency had output during precompilation: ┌ Bonito │ [Output was shown above] └ ERROR: LoadError: The following 1 package failed to precompile: Bonito Failed to precompile Bonito [824d6782-a2ef-11e9-3a09-e5662e0c26f8] to "/home/pkgeval/.julia/compiled/v1.14/Bonito/jl_KHcftS" (ProcessExited(1)). in expression starting at /home/pkgeval/.julia/packages/WGLMakie/KlHpR/src/WGLMakie.jl:1 in expression starting at /home/pkgeval/.julia/packages/MoleculeView/lrfKI/src/scatter/interactive_scatter.jl:1 in expression starting at /home/pkgeval/.julia/packages/MoleculeView/lrfKI/src/MoleculeView.jl:1 in expression starting at /home/pkgeval/.julia/packages/MoleculeView/lrfKI/test/runtests.jl:2 Testing failed after 592.08s ERROR: LoadError: Package MoleculeView errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2946 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2795 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:572 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:548 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [12] include(mod::Module, _path::String) @ Base ./Base.jl:309 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 1876.24s: package fails to precompile