Package evaluation to test SurvivalAnalysis on Julia 1.14.0-DEV.50 (b60d1db399*) started at 2025-11-09T22:47:31.750 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 10.66s ################################################################################ # Installation # Installing SurvivalAnalysis... Resolving package versions... Installed Rmath_jll ─────────────────── v0.5.1+0 Installed MacroTools ────────────────── v0.5.16 Installed DiffResults ───────────────── v1.1.0 Installed DataStructures ────────────── v0.18.22 Installed RCall ─────────────────────── v0.13.18 Installed ForwardDiff ───────────────── v1.2.2 Installed Formatting ────────────────── v0.4.3 Installed SurvivalAnalysis ──────────── v0.1.0 Installed Adapt ─────────────────────── v4.4.0 Installed HypergeometricFunctions ───── v0.3.28 Installed ConstructionBase ──────────── v1.6.0 Installed VersionParsing ────────────── v1.3.0 Installed StatsModels ───────────────── v0.6.33 Installed FillArrays ────────────────── v0.13.11 Installed StatsBase ─────────────────── v0.33.21 Installed Optim ─────────────────────── v1.13.2 Installed ShiftedArrays ─────────────── v2.0.0 Installed RecipesBase ───────────────── v1.3.4 Installed ArrayInterface ────────────── v7.22.0 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed Compat ────────────────────── v4.18.1 Installed DataAPI ───────────────────── v1.16.0 Installed OrderedCollections ────────── v1.8.1 Installed InvertedIndices ───────────── v1.3.1 Installed Statistics ────────────────── v1.11.1 Installed DataValueInterfaces ───────── v1.0.0 Installed StatsAPI ──────────────────── v1.7.1 Installed StaticArraysCore ──────────── v1.4.4 Installed Conda ─────────────────────── v1.10.3 Installed PositiveFactorizations ────── v0.2.4 Installed CommonSubexpressions ──────── v0.3.1 Installed ChainRulesCore ────────────── v1.26.0 Installed PrecompileTools ───────────── v1.3.3 Installed StructUtils ───────────────── v2.6.0 Installed WinReg ────────────────────── v1.0.0 Installed IrrationalConstants ───────── v0.2.6 Installed NaNMath ───────────────────── v1.1.3 Installed Requires ──────────────────── v1.3.1 Installed QuadGK ────────────────────── v2.11.2 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed LogExpFunctions ───────────── v0.3.29 Installed DiffRules ─────────────────── v1.15.1 Installed Rmath ─────────────────────── v0.9.0 Installed Parsers ───────────────────── v2.8.3 Installed FiniteDiff ────────────────── v2.29.0 Installed JSON ──────────────────────── v1.2.1 Installed Parameters ────────────────── v0.12.3 Installed Distributions ─────────────── v0.25.67 Installed EnumX ─────────────────────── v1.0.5 Installed Tables ────────────────────── v1.12.1 Installed StatsFuns ─────────────────── v1.5.2 Installed NLSolversBase ─────────────── v7.10.0 Installed InverseFunctions ──────────── v0.1.17 Installed Reexport ──────────────────── v1.2.2 Installed SpecialFunctions ──────────── v2.6.1 Installed Setfield ──────────────────── v1.1.2 Installed Preferences ───────────────── v1.5.0 Installed Missings ──────────────────── v1.2.0 Installed DataFrames ────────────────── v1.3.6 Installed PrettyTables ──────────────── v1.3.1 Installed PooledArrays ──────────────── v1.4.3 Installed JLLWrappers ───────────────── v1.7.1 Installed TableTraits ───────────────── v1.0.1 Installed Crayons ───────────────────── v4.1.1 Installed SortingAlgorithms ─────────── v1.2.2 Installed UnPack ────────────────────── v1.0.2 Installed PDMats ────────────────────── v0.11.35 Installed ADTypes ───────────────────── v1.18.0 Installed LineSearches ──────────────── v7.4.0 Installed DensityInterface ──────────── v0.4.0 Installed DocStringExtensions ───────── v0.9.5 Installed CategoricalArrays ─────────── v0.10.7 Installed DifferentiationInterface ──── v0.7.11 Installing 2 artifacts Installed artifact Rmath 121.9 KiB Installed artifact OpenSpecFun 194.9 KiB Updating `~/.julia/environments/v1.14/Project.toml` [d1dd7d07] + SurvivalAnalysis v0.1.0 Updating `~/.julia/environments/v1.14/Manifest.toml` [47edcb42] + ADTypes v1.18.0 [79e6a3ab] + Adapt v4.4.0 [4fba245c] + ArrayInterface v7.22.0 ⌅ [324d7699] + CategoricalArrays v0.10.7 [d360d2e6] + ChainRulesCore v1.26.0 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.18.1 [8f4d0f93] + Conda v1.10.3 [187b0558] + ConstructionBase v1.6.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 ⌃ [a93c6f00] + DataFrames v1.3.6 ⌅ [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [b429d917] + DensityInterface v0.4.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.11 ⌅ [31c24e10] + Distributions v0.25.67 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.5 ⌅ [1a297f60] + FillArrays v0.13.11 [6a86dc24] + FiniteDiff v2.29.0 [59287772] + Formatting v0.4.3 [f6369f11] + ForwardDiff v1.2.2 [34004b35] + HypergeometricFunctions v0.3.28 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [682c06a0] + JSON v1.2.1 [d3d80556] + LineSearches v7.4.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.3 [429524aa] + Optim v1.13.2 [bac558e1] + OrderedCollections v1.8.1 ⌃ [90014a1f] + PDMats v0.11.35 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 [2dfb63ee] + PooledArrays v1.4.3 [85a6dd25] + PositiveFactorizations v0.2.4 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 ⌅ [08abe8d2] + PrettyTables v1.3.1 [1fd47b50] + QuadGK v2.11.2 ⌅ [6f49c342] + RCall v0.13.18 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [efcf1570] + Setfield v1.1.2 [1277b4bf] + ShiftedArrays v2.0.0 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 ⌅ [2913bbd2] + StatsBase v0.33.21 [4c63d2b9] + StatsFuns v1.5.2 ⌅ [3eaba693] + StatsModels v0.6.33 [ec057cc2] + StructUtils v2.6.0 [d1dd7d07] + SurvivalAnalysis v0.1.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [3a884ed6] + UnPack v1.0.2 [81def892] + VersionParsing v1.3.0 [1b915085] + WinReg v1.0.0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v1.0.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [ca575930] + NetworkOptions v1.3.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.16.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.68.0+1 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Building Conda → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/8f06b0cfa4c514c7b9546756dbae91fcfbc92dc9/build.log` Building RCall → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/3084689b18f9e5e817a6ce9a83a7654d8ad0f2f6/build.log` Installation completed after 150.02s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4612.5 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. 1 dependency had output during precompilation: ┌ TestEnv │ WARNING: Imported binding Operations.project_rel_path was undeclared at import time during import to TestEnv. └ ┌ Error: Failed to use TestEnv.jl; test dependencies will not be precompiled │ exception = │ UndefVarError: `project_rel_path` not defined in `TestEnv` │ Suggestion: this global was defined as `Pkg.Operations.project_rel_path` but not assigned a value. │ Stacktrace: │ [1] get_test_dir(ctx::Pkg.Types.Context, pkgspec::PackageSpec) │ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:75 │ [2] test_dir_has_project_file │ @ ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:52 [inlined] │ [3] maybe_gen_project_override! │ @ ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:83 [inlined] │ [4] activate(pkg::String; allow_reresolve::Bool) │ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:12 │ [5] activate(pkg::String) │ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:9 │ [6] top-level scope │ @ /PkgEval.jl/scripts/precompile.jl:24 │ [7] include(mod::Module, _path::String) │ @ Base ./Base.jl:309 │ [8] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:344 │ [9] _start() │ @ Base ./client.jl:577 └ @ Main /PkgEval.jl/scripts/precompile.jl:26 Precompiling package dependencies... Precompiling packages... 4209.2 ms ✓ MacroTools 824.5 ms ✓ Reexport 1014.9 ms ✓ PositiveFactorizations 897.6 ms ✓ DataAPI 1089.3 ms ✓ Statistics 1088.8 ms ✓ ConstructionBase 2024.6 ms ✓ IrrationalConstants 999.6 ms ✓ UnPack 837.9 ms ✓ DataValueInterfaces 970.6 ms ✓ StaticArraysCore 882.0 ms ✓ StatsAPI 1237.5 ms ✓ Requires 1285.0 ms ✓ OrderedCollections 906.6 ms ✓ InvertedIndices 1079.2 ms ✓ InverseFunctions 1344.1 ms ✓ ADTypes 1131.9 ms ✓ DocStringExtensions 934.2 ms ✓ ShiftedArrays 978.1 ms ✓ VersionParsing 807.9 ms ✓ WinReg 862.3 ms ✓ EnumX 901.7 ms ✓ IteratorInterfaceExtensions 1403.5 ms ✓ SuiteSparse 1956.1 ms ✓ Crayons 1381.4 ms ✓ Formatting 976.9 ms ✓ NaNMath 1485.0 ms ✓ StructUtils 1194.7 ms ✓ Compat 1204.5 ms ✓ Preferences 52449.3 ms ✓ REPL 1850.5 ms ✓ CommonSubexpressions 1000.9 ms ✓ Missings 1017.0 ms ✓ PooledArrays 1484.4 ms ✓ Statistics → SparseArraysExt 829.3 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 884.4 ms ✓ DiffResults 943.7 ms ✓ Adapt 1038.1 ms ✓ Parameters 2054.0 ms ✓ InverseFunctions → InverseFunctionsTestExt 1105.8 ms ✓ InverseFunctions → InverseFunctionsDatesExt 1754.4 ms ✓ DifferentiationInterface 792.8 ms ✓ ADTypes → ADTypesConstructionBaseExt 1426.1 ms ✓ LogExpFunctions 743.5 ms ✓ TableTraits 1741.3 ms ✓ PDMats 883.6 ms ✓ Compat → CompatLinearAlgebraExt 1253.9 ms ✓ JLLWrappers 1063.3 ms ✓ PrecompileTools 7104.2 ms ✓ CategoricalArrays 2342.6 ms ✓ FillArrays 3082.0 ms ✓ Setfield 1239.4 ms ✓ ArrayInterface 1272.7 ms ✓ Adapt → AdaptSparseArraysExt 1808.5 ms ✓ DensityInterface 1342.4 ms ✓ DifferentiationInterface → DifferentiationInterfaceSparseArraysExt 872.8 ms ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt 1823.8 ms ✓ Tables 2618.8 ms ✓ ChainRulesCore 4118.7 ms ✓ DataStructures 1406.4 ms ✓ Rmath_jll 1526.5 ms ✓ OpenSpecFun_jll 2839.8 ms ✓ RecipesBase 16530.4 ms ✓ Parsers 818.5 ms ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 1287.0 ms ✓ ArrayInterface → ArrayInterfaceSparseArraysExt 7711.4 ms ✓ PrettyTables 829.2 ms ✓ StructUtils → StructUtilsTablesExt 1313.0 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 806.4 ms ✓ ADTypes → ADTypesChainRulesCoreExt 856.2 ms ✓ DifferentiationInterface → DifferentiationInterfaceChainRulesCoreExt 2952.5 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 806.6 ms ✓ ArrayInterface → ArrayInterfaceChainRulesCoreExt 1525.0 ms ✓ SortingAlgorithms 2987.6 ms ✓ QuadGK 1432.9 ms ✓ Rmath 4952.4 ms ✓ SpecialFunctions 6959.7 ms ✓ JSON 1330.2 ms ✓ FiniteDiff 8541.9 ms ✓ StatsBase 43455.3 ms ✓ DataFrames 2862.3 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 1774.3 ms ✓ HypergeometricFunctions 1014.1 ms ✓ DiffRules 1826.9 ms ✓ Conda 957.8 ms ✓ FiniteDiff → FiniteDiffSparseArraysExt 752.4 ms ✓ DifferentiationInterface → DifferentiationInterfaceFiniteDiffExt 2241.9 ms ✓ StatsFuns 5232.0 ms ✓ ForwardDiff 1459.8 ms ✓ StatsFuns → StatsFunsInverseFunctionsExt 2628.7 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 5688.4 ms ✓ StatsModels 1228.5 ms ✓ DifferentiationInterface → DifferentiationInterfaceForwardDiffExt 13634.2 ms ✓ Distributions 12832.8 ms ✓ RCall 2134.0 ms ✓ NLSolversBase 4215.2 ms ✓ LineSearches 10589.2 ms ✓ Optim 11865.4 ms ✓ SurvivalAnalysis 98 dependencies successfully precompiled in 333 seconds. 29 already precompiled. 2 dependencies had output during precompilation: ┌ Formatting │ ┌ Warning: DEPRECATION NOTICE │ │ │ │ Formatting.jl has been unmaintained for a while, with some serious │ │ correctness bugs compromising the original purpose of the package. As a result, │ │ it has been deprecated - consider using an alternative, such as │ │ `Format.jl` (https://github.com/JuliaString/Format.jl) or the `Printf` stdlib directly. │ │ │ │ If you are not using Formatting.jl as a direct dependency, please consider │ │ opening an issue on any packages you are using that do use it as a dependency. │ │ From Julia 1.9 onwards, you can query `]why Formatting` to figure out which │ │ package originally brings it in as a dependency. │ └ @ Formatting ~/.julia/packages/Formatting/3VxOt/src/Formatting.jl:12 └ ┌ DataFrames │ WARNING: method definition for #DataFrame#200 at /home/pkgeval/.julia/packages/DataFrames/JZ7x5/src/dataframe/dataframe.jl:397 declares type variable T but does not use it. │ WARNING: method definition for col_ordering at /home/pkgeval/.julia/packages/DataFrames/JZ7x5/src/abstractdataframe/sort.jl:145 declares type variable O but does not use it. └ Precompilation completed after 338.72s ################################################################################ # Testing # Testing SurvivalAnalysis Status `/tmp/jl_lRrtdK/Project.toml` ⌃ [a93c6f00] DataFrames v1.3.6 ⌅ [31c24e10] Distributions v0.25.67 [d41bc354] NLSolversBase v7.10.0 [429524aa] Optim v1.13.2 ⌅ [08abe8d2] PrettyTables v1.3.1 ⌅ [6f49c342] RCall v0.13.18 [3cdcf5f2] RecipesBase v1.3.4 ⌅ [2913bbd2] StatsBase v0.33.21 ⌅ [3eaba693] StatsModels v0.6.33 [d1dd7d07] SurvivalAnalysis v0.1.0 [37e2e46d] LinearAlgebra v1.13.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_lRrtdK/Manifest.toml` [47edcb42] ADTypes v1.18.0 [79e6a3ab] Adapt v4.4.0 [4fba245c] ArrayInterface v7.22.0 ⌅ [324d7699] CategoricalArrays v0.10.7 [d360d2e6] ChainRulesCore v1.26.0 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.18.1 [8f4d0f93] Conda v1.10.3 [187b0558] ConstructionBase v1.6.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 ⌃ [a93c6f00] DataFrames v1.3.6 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [b429d917] DensityInterface v0.4.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.11 ⌅ [31c24e10] Distributions v0.25.67 [ffbed154] DocStringExtensions v0.9.5 [4e289a0a] EnumX v1.0.5 ⌅ [1a297f60] FillArrays v0.13.11 [6a86dc24] FiniteDiff v2.29.0 [59287772] Formatting v0.4.3 [f6369f11] ForwardDiff v1.2.2 [34004b35] HypergeometricFunctions v0.3.28 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v1.2.1 [d3d80556] LineSearches v7.4.0 [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.16 [e1d29d7a] Missings v1.2.0 [d41bc354] NLSolversBase v7.10.0 [77ba4419] NaNMath v1.1.3 [429524aa] Optim v1.13.2 [bac558e1] OrderedCollections v1.8.1 ⌃ [90014a1f] PDMats v0.11.35 [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.3 [2dfb63ee] PooledArrays v1.4.3 [85a6dd25] PositiveFactorizations v0.2.4 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 ⌅ [08abe8d2] PrettyTables v1.3.1 [1fd47b50] QuadGK v2.11.2 ⌅ [6f49c342] RCall v0.13.18 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [efcf1570] Setfield v1.1.2 [1277b4bf] ShiftedArrays v2.0.0 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.6.1 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 ⌅ [2913bbd2] StatsBase v0.33.21 [4c63d2b9] StatsFuns v1.5.2 ⌅ [3eaba693] StatsModels v0.6.33 [ec057cc2] StructUtils v2.6.0 [d1dd7d07] SurvivalAnalysis v0.1.0 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [3a884ed6] UnPack v1.0.2 [81def892] VersionParsing v1.3.0 [1b915085] WinReg v1.0.0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [b27032c2] LibCURL v1.0.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [ca575930] NetworkOptions v1.3.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.16.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.11.4 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.68.0+1 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... PH(distr=Exponential{Float64}(θ=0.2), lp=0.1)AFT(distr=Exponential{Float64}(θ=0.2), lp=0.1)Test Summary: | Pass Total Time ContinuousUnivariateDistribution.jl | 17 17 10.2s StatsModels.TableStatisticalModel{ParametricAFT{Weibull}, Matrix{Float64}} (T_Weib,δ;+) ~ 1 Distr: Weibull{Float64}(α=1.9519886643909778, θ=4.967038229041934) Coefficients: (Scale) (Intercept) 0.512298 1.60282 ParametricAFT{Weibull} Distr: Weibull{Float64}(α=1.9519886643909778, θ=4.967038229041934) Coefficients: (Scale) (Intercept) 0.512298 1.60282 ParametricSurvival.jl: Error During Test at /home/pkgeval/.julia/packages/SurvivalAnalysis/kuB8k/test/runtests.jl:14 Test threw exception Expression: include(f) LoadError: could not load symbol "SET_SYMVALUE": /home/pkgeval/.julia/conda/3/x86_64/lib/R/lib/libR.so: undefined symbol: SET_SYMVALUE Stacktrace: [1] set_last_value(s::Ptr{EnvSxp}) @ RCall ~/.julia/packages/RCall/gOwEW/src/methods.jl:588 [2] reval_p(expr::Ptr{RCall.ExprSxp}, env::Ptr{EnvSxp}) @ RCall ~/.julia/packages/RCall/gOwEW/src/eval.jl:126 [3] reval_p(expr::Ptr{RCall.ExprSxp}) @ RCall ~/.julia/packages/RCall/gOwEW/src/eval.jl:99 [4] top-level scope @ ~/.julia/packages/SurvivalAnalysis/kuB8k/test/ParametricSurvival.jl:66 [5] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [6] eval_test_function(func::Any, args::Any, kwargs::Any, quoted_func::Union{Expr, Symbol}, source::LineNumberNode, negate::Bool) @ Test /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:394 [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:750 [inlined] [8] macro expansion @ ~/.julia/packages/SurvivalAnalysis/kuB8k/test/runtests.jl:14 [inlined] [9] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [10] top-level scope @ ~/.julia/packages/SurvivalAnalysis/kuB8k/test/runtests.jl:14 in expression starting at /home/pkgeval/.julia/packages/SurvivalAnalysis/kuB8k/test/ParametricSurvival.jl:51 Test Summary: | Pass Error Total Time ParametricSurvival.jl | 13 1 14 2m12.2s Check correct class | 8 8 0.1s Check printing | 2 2 16.4s Check parameters against theoretical | 3 3 0.1s RNG of the outermost testset: Xoshiro(0x2bc93c504cbbdedf, 0xf4bf99d7b468f1e8, 0xb4f5de78142ada03, 0xe78d11f2e479a585, 0xe7b0dfd40e207d49) ERROR: LoadError: Some tests did not pass: 13 passed, 0 failed, 1 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/SurvivalAnalysis/kuB8k/test/runtests.jl:12 Testing failed after 168.17s ERROR: LoadError: Package SurvivalAnalysis errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2946 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2795 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:572 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:548 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [12] include(mod::Module, _path::String) @ Base ./Base.jl:309 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 779.71s: package tests unexpectedly errored