Package evaluation to test ThermodynamicIntegration on Julia 1.14.0-DEV.30 (073666df8b*) started at 2025-11-04T19:50:44.224 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 10.02s ################################################################################ # Installation # Installing ThermodynamicIntegration... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [1022446e] + ThermodynamicIntegration v0.2.8 Updating `~/.julia/environments/v1.14/Manifest.toml` [80f14c24] + AbstractMCMC v5.9.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 ⌅ [0bf59076] + AdvancedHMC v0.6.4 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [198e06fe] + BangBang v0.4.6 [9718e550] + Baselet v0.1.1 [bbf7d656] + CommonSubexpressions v0.3.1 [a33af91c] + CompositionsBase v0.1.2 [88cd18e8] + ConsoleProgressMonitor v0.1.2 [187b0558] + ConstructionBase v1.6.0 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.2 [e2d170a0] + DataValueInterfaces v1.0.0 [244e2a9f] + DefineSingletons v0.1.2 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [ffbed154] + DocStringExtensions v0.9.5 [1a297f60] + FillArrays v1.14.0 ⌅ [f6369f11] + ForwardDiff v0.10.39 [34004b35] + HypergeometricFunctions v0.3.28 [22cec73e] + InitialValues v0.3.1 [505f98c9] + InplaceOps v0.3.0 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [1d6d02ad] + LeftChildRightSiblingTrees v0.2.1 [6fdf6af0] + LogDensityProblems v2.2.0 [996a588d] + LogDensityProblemsAD v1.13.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 [1914dd2f] + MacroTools v0.5.16 [128add7d] + MicroCollections v0.2.0 [e1d29d7a] + Missings v1.2.0 [77ba4419] + NaNMath v1.1.3 [bac558e1] + OrderedCollections v1.8.1 [21216c6a] + Preferences v1.5.0 [33c8b6b6] + ProgressLogging v0.1.5 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.3.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [efcf1570] + Setfield v1.1.2 [ce78b400] + SimpleUnPack v1.1.0 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [171d559e] + SplittablesBase v0.1.15 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.7 [4c63d2b9] + StatsFuns v1.5.2 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [5d786b92] + TerminalLoggers v0.1.7 [1022446e] + ThermodynamicIntegration v0.2.8 [28d57a85] + Transducers v0.4.85 [592b5752] + Trapz v2.0.3 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 5.16s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Error: Failed to use TestEnv.jl; test dependencies will not be precompiled │ exception = │ UndefVarError: `project_rel_path` not defined in `TestEnv` │ Suggestion: this global was defined as `Pkg.Operations.project_rel_path` but not assigned a value. │ Stacktrace: │ [1] get_test_dir(ctx::Pkg.Types.Context, pkgspec::PackageSpec) │ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:75 │ [2] test_dir_has_project_file │ @ ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:52 [inlined] │ [3] maybe_gen_project_override! │ @ ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:83 [inlined] │ [4] activate(pkg::String; allow_reresolve::Bool) │ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:12 │ [5] activate(pkg::String) │ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:9 │ [6] top-level scope │ @ /PkgEval.jl/scripts/precompile.jl:24 │ [7] include(mod::Module, _path::String) │ @ Base ./Base.jl:309 │ [8] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:344 │ [9] _start() │ @ Base ./client.jl:577 └ @ Main /PkgEval.jl/scripts/precompile.jl:26 Precompiling package dependencies... Precompiling packages... 5549.8 ms ✓ AbstractMCMC 4543.1 ms ✓ LogDensityProblemsAD → LogDensityProblemsADForwardDiffExt 7470.4 ms ✓ AdvancedHMC 5427.5 ms ✓ ThermodynamicIntegration 4 dependencies successfully precompiled in 32 seconds. 90 already precompiled. Precompilation completed after 33.66s ################################################################################ # Testing # Testing ThermodynamicIntegration Status `/tmp/jl_JYop3c/Project.toml` [31c24e10] Distributions v0.25.122 ⌅ [f6369f11] ForwardDiff v0.10.39 [37e2e3b7] ReverseDiff v1.16.1 [1022446e] ThermodynamicIntegration v0.2.8 [fce5fe82] Turing v0.41.0 [e88e6eb3] Zygote v0.7.10 [8ba89e20] Distributed v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_JYop3c/Manifest.toml` [47edcb42] ADTypes v1.18.0 [621f4979] AbstractFFTs v1.5.0 [80f14c24] AbstractMCMC v5.9.0 [7a57a42e] AbstractPPL v0.13.5 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.4.0 ⌅ [0bf59076] AdvancedHMC v0.6.4 [5b7e9947] AdvancedMH v0.8.9 [576499cb] AdvancedPS v0.7.0 ⌅ [b5ca4192] AdvancedVI v0.4.1 [66dad0bd] AliasTables v1.1.3 [dce04be8] ArgCheck v2.5.0 [4fba245c] ArrayInterface v7.22.0 [13072b0f] AxisAlgorithms v1.1.0 [39de3d68] AxisArrays v0.4.8 [198e06fe] BangBang v0.4.6 [9718e550] Baselet v0.1.1 [76274a88] Bijectors v0.15.12 [082447d4] ChainRules v1.72.6 [d360d2e6] ChainRulesCore v1.26.0 [0ca39b1e] Chairmarks v1.3.1 [9e997f8a] ChangesOfVariables v0.1.10 [861a8166] Combinatorics v1.0.3 [38540f10] CommonSolve v0.2.4 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [88cd18e8] ConsoleProgressMonitor v0.1.2 [187b0558] ConstructionBase v1.6.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.19.2 [e2d170a0] DataValueInterfaces v1.0.0 [244e2a9f] DefineSingletons v0.1.2 [8bb1440f] DelimitedFiles v1.9.1 [b429d917] DensityInterface v0.4.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.10 [31c24e10] Distributions v0.25.122 [ced4e74d] DistributionsAD v0.6.58 [ffbed154] DocStringExtensions v0.9.5 [366bfd00] DynamicPPL v0.38.4 [cad2338a] EllipticalSliceSampling v2.0.0 [4e289a0a] EnumX v1.0.5 [e2ba6199] ExprTools v0.1.10 [55351af7] ExproniconLite v0.10.14 [7a1cc6ca] FFTW v1.10.0 [9aa1b823] FastClosures v0.3.2 [1a297f60] FillArrays v1.14.0 [6a86dc24] FiniteDiff v2.29.0 ⌅ [f6369f11] ForwardDiff v0.10.39 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v0.1.3 [d9f16b24] Functors v0.5.2 [46192b85] GPUArraysCore v0.2.0 [34004b35] HypergeometricFunctions v0.3.28 [7869d1d1] IRTools v0.4.15 [22cec73e] InitialValues v0.3.1 [505f98c9] InplaceOps v0.3.0 [a98d9a8b] Interpolations v0.16.2 [8197267c] IntervalSets v0.7.11 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v1.2.0 [ae98c720] Jieko v0.2.1 [5ab0869b] KernelDensity v0.6.10 [b964fa9f] LaTeXStrings v1.4.0 [1d6d02ad] LeftChildRightSiblingTrees v0.2.1 [6f1fad26] Libtask v0.9.7 [d3d80556] LineSearches v7.4.0 [6fdf6af0] LogDensityProblems v2.2.0 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SplittablesBase v0.1.15 [90137ffa] StaticArrays v1.9.15 [1e83bf80] StaticArraysCore v1.4.4 [64bff920] StatisticalTraits v3.5.0 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.7 [4c63d2b9] StatsFuns v1.5.2 [892a3eda] StringManipulation v0.4.1 [09ab397b] StructArrays v0.7.2 [ec057cc2] StructUtils v2.5.1 ⌃ [2efcf032] SymbolicIndexingInterface v0.3.44 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [5d786b92] TerminalLoggers v0.1.7 [1022446e] ThermodynamicIntegration v0.2.8 [28d57a85] Transducers v0.4.85 [592b5752] Trapz v2.0.3 [fce5fe82] Turing v0.41.0 [3a884ed6] UnPack v1.0.2 [efce3f68] WoodburyMatrices v1.0.0 [e88e6eb3] Zygote v0.7.10 [700de1a5] ZygoteRules v0.2.7 [f5851436] FFTW_jll v3.3.11+0 [1d5cc7b8] IntelOpenMP_jll v2025.2.0+0 [856f044c] MKL_jll v2025.2.0+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [1317d2d5] oneTBB_jll v2022.0.0+1 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 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LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.9.9 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.67.1+0 [3f19e933] p7zip_jll v17.6.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... TI Sampling: 7%|██▋ | ETA: 0:02:59 TI Sampling: 13%|█████▎ | ETA: 0:01:26 TI Sampling: 17%|██████▌ | ETA: 0:01:07 TI Sampling: 20%|███████▊ | ETA: 0:00:54 TI Sampling: 23%|█████████▏ | ETA: 0:00:45 TI Sampling: 27%|██████████▍ | ETA: 0:00:38 TI Sampling: 30%|███████████▊ | ETA: 0:00:33 TI Sampling: 33%|█████████████ | ETA: 0:00:28 TI Sampling: 37%|██████████████▎ | ETA: 0:00:25 TI Sampling: 40%|███████████████▋ | ETA: 0:00:22 TI Sampling: 43%|████████████████▉ | ETA: 0:00:19 TI Sampling: 47%|██████████████████▎ | ETA: 0:00:17 TI Sampling: 50%|███████████████████▌ | ETA: 0:00:15 TI Sampling: 53%|████████████████████▊ | ETA: 0:00:13 TI Sampling: 57%|██████████████████████▏ | ETA: 0:00:12 TI Sampling: 60%|███████████████████████▍ | ETA: 0:00:10 TI Sampling: 63%|████████████████████████▊ | ETA: 0:00:09 TI Sampling: 67%|██████████████████████████ | ETA: 0:00:08 TI Sampling: 70%|███████████████████████████▎ | ETA: 0:00:07 TI Sampling: 73%|████████████████████████████▋ | ETA: 0:00:06 TI Sampling: 77%|█████████████████████████████▉ | ETA: 0:00:05 TI Sampling: 80%|███████████████████████████████▎ | ETA: 0:00:04 TI Sampling: 83%|████████████████████████████████▌ | ETA: 0:00:03 TI Sampling: 87%|█████████████████████████████████▊ | ETA: 0:00:03 TI Sampling: 90%|███████████████████████████████████▏ | ETA: 0:00:02 TI Sampling: 93%|████████████████████████████████████▍ | ETA: 0:00:01 TI Sampling: 97%|█████████████████████████████████████▊ | ETA: 0:00:01 TI Sampling: 100%|███████████████████████████████████████| Time: 0:00:17 Turing - ThermInt - TISerial: Error During Test at /home/pkgeval/.julia/packages/ThermodynamicIntegration/e82iS/test/thermint.jl:27 Got exception outside of a @test UndefVarError: `SampleFromPrior` not defined in `DynamicPPL` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] getproperty @ ./Base_compiler.jl:50 [inlined] [2] get_logprior(model::DynamicPPL.Model{var"#gauss#5"{ZeroMeanDiagNormal{Tuple{Base.OneTo{Int64}}}, ZeroMeanDiagNormal{Tuple{Base.OneTo{Int64}}}}, (:y,), (), (), Tuple{Vector{Float64}}, Tuple{}, DynamicPPL.DefaultContext}) @ ThermodynamicIntegration ~/.julia/packages/ThermodynamicIntegration/e82iS/src/turing.jl:61 [3] evaluate_loglikelihood(model::DynamicPPL.Model{var"#gauss#5"{ZeroMeanDiagNormal{Tuple{Base.OneTo{Int64}}}, ZeroMeanDiagNormal{Tuple{Base.OneTo{Int64}}}}, (:y,), (), (), Tuple{Vector{Float64}}, Tuple{}, DynamicPPL.DefaultContext}, alg::ThermInt{:ForwardDiff, Random.TaskLocalRNG, Vector{Float64}}, β::Float64) @ ThermodynamicIntegration ~/.julia/packages/ThermodynamicIntegration/e82iS/src/turing.jl:49 [4] #33 @ ~/.julia/packages/ThermodynamicIntegration/e82iS/src/turing.jl:11 [inlined] [5] (::ThermodynamicIntegration.var"#33#34"{ThermInt{:ForwardDiff, Random.TaskLocalRNG, Vector{Float64}}, DynamicPPL.Model{var"#gauss#5"{ZeroMeanDiagNormal{Tuple{Base.OneTo{Int64}}}, ZeroMeanDiagNormal{Tuple{Base.OneTo{Int64}}}}, (:y,), (), (), Tuple{Vector{Float64}}, Tuple{}, DynamicPPL.DefaultContext}, ProgressMeter.Progress})(β::Float64) @ ThermodynamicIntegration ./none:0 [6] iterate @ ./generator.jl:48 [inlined] [7] collect @ ./array.jl:828 [inlined] [8] (::ThermInt{:ForwardDiff, Random.TaskLocalRNG, Vector{Float64}})(model::DynamicPPL.Model{var"#gauss#5"{ZeroMeanDiagNormal{Tuple{Base.OneTo{Int64}}}, ZeroMeanDiagNormal{Tuple{Base.OneTo{Int64}}}}, (:y,), (), (), Tuple{Vector{Float64}}, Tuple{}, DynamicPPL.DefaultContext}, ::TISerial; progress::Bool, kwargs::@Kwargs{}) @ ThermodynamicIntegration ~/.julia/packages/ThermodynamicIntegration/e82iS/src/turing.jl:8 [9] (::ThermInt{:ForwardDiff, Random.TaskLocalRNG, Vector{Float64}})(model::DynamicPPL.Model{var"#gauss#5"{ZeroMeanDiagNormal{Tuple{Base.OneTo{Int64}}}, ZeroMeanDiagNormal{Tuple{Base.OneTo{Int64}}}}, (:y,), (), (), Tuple{Vector{Float64}}, Tuple{}, DynamicPPL.DefaultContext}, ::TISerial) @ ThermodynamicIntegration ~/.julia/packages/ThermodynamicIntegration/e82iS/src/turing.jl:3 [10] macro expansion @ ~/.julia/packages/ThermodynamicIntegration/e82iS/test/thermint.jl:35 [inlined] [11] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [12] test_basic_turing(alg::ThermInt{:ForwardDiff, Random.TaskLocalRNG, Vector{Float64}}, method::TISerial; D::Int64, atol::Float64) @ Main ~/.julia/packages/ThermodynamicIntegration/e82iS/test/thermint.jl:28 [13] test_basic_turing(alg::ThermInt{:ForwardDiff, Random.TaskLocalRNG, Vector{Float64}}, method::TISerial) @ Main ~/.julia/packages/ThermodynamicIntegration/e82iS/test/thermint.jl:24 [14] top-level scope @ ~/.julia/packages/ThermodynamicIntegration/e82iS/test/thermint.jl:43 [15] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [16] macro expansion @ ~/.julia/packages/ThermodynamicIntegration/e82iS/test/thermint.jl:46 [inlined] [17] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [18] top-level scope @ ~/.julia/packages/ThermodynamicIntegration/e82iS/test/runtests.jl:4 [19] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [20] macro expansion @ ~/.julia/packages/ThermodynamicIntegration/e82iS/test/runtests.jl:4 [inlined] [21] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [22] top-level scope @ none:6 [23] eval(m::Module, e::Any) @ Core ./boot.jl:489 [24] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [25] _start() @ Base ./client.jl:577 ┌ Warning: Only one thread available, parallelization will not happen. Start Julia with `julia --threads n` └ @ ThermodynamicIntegration ~/.julia/packages/ThermodynamicIntegration/e82iS/src/thermint.jl:66 TI Multithreaded Sampling: 7%|█▋ | ETA: 0:00:14 TI Multithreaded Sampling: 10%|██▌ | ETA: 0:00:17 TI Multithreaded Sampling: 13%|███▍ | ETA: 0:00:13 TI Multithreaded Sampling: 17%|████▏ | ETA: 0:00:11 TI Multithreaded Sampling: 20%|█████ | ETA: 0:00:10 TI Multithreaded Sampling: 23%|█████▉ | ETA: 0:00:09 TI Multithreaded Sampling: 27%|██████▋ | ETA: 0:00:08 TI Multithreaded Sampling: 30%|███████▌ | ETA: 0:00:07 TI Multithreaded Sampling: 33%|████████▍ | ETA: 0:00:06 TI Multithreaded Sampling: 37%|█████████▏ | ETA: 0:00:06 TI Multithreaded Sampling: 40%|██████████ | ETA: 0:00:05 TI Multithreaded Sampling: 43%|██████████▉ | ETA: 0:00:05 TI Multithreaded Sampling: 47%|███████████▋ | ETA: 0:00:05 TI Multithreaded Sampling: 50%|████████████▌ | ETA: 0:00:04 TI Multithreaded Sampling: 53%|█████████████▍ | ETA: 0:00:04 TI Multithreaded Sampling: 57%|██████████████▏ | ETA: 0:00:04 TI Multithreaded Sampling: 60%|███████████████ | ETA: 0:00:03 TI Multithreaded Sampling: 63%|███████████████▉ | ETA: 0:00:03 TI Multithreaded Sampling: 67%|████████████████▋ | ETA: 0:00:03 TI Multithreaded Sampling: 70%|█████████████████▌ | ETA: 0:00:02 TI Multithreaded Sampling: 73%|██████████████████▍ | ETA: 0:00:02 TI Multithreaded Sampling: 77%|███████████████████▏ | ETA: 0:00:02 TI Multithreaded Sampling: 80%|████████████████████ | ETA: 0:00:02 TI Multithreaded Sampling: 83%|████████████████████▉ | ETA: 0:00:01 TI Multithreaded Sampling: 87%|█████████████████████▋ | ETA: 0:00:01 TI Multithreaded Sampling: 90%|██████████████████████▌ | ETA: 0:00:01 TI Multithreaded Sampling: 93%|███████████████████████▍ | ETA: 0:00:01 TI Multithreaded Sampling: 97%|████████████████████████▏| ETA: 0:00:00 TI Multithreaded Sampling: 100%|█████████████████████████| Time: 0:00:07 ┌ Warning: Only one thread available, parallelization will not happen. Start Julia with `julia --threads n` └ @ ThermodynamicIntegration ~/.julia/packages/ThermodynamicIntegration/e82iS/src/thermint.jl:66 Turing - ThermInt - TIThreads: Error During Test at /home/pkgeval/.julia/packages/ThermodynamicIntegration/e82iS/test/thermint.jl:27 Got exception outside of a @test TaskFailedException nested task error: UndefVarError: `SampleFromPrior` not defined in `DynamicPPL` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] getproperty @ ./Base_compiler.jl:50 [inlined] [2] get_logprior(model::DynamicPPL.Model{var"#gauss#5"{ZeroMeanDiagNormal{Tuple{Base.OneTo{Int64}}}, ZeroMeanDiagNormal{Tuple{Base.OneTo{Int64}}}}, (:y,), (), (), Tuple{Vector{Float64}}, Tuple{}, DynamicPPL.DefaultContext}) @ ThermodynamicIntegration ~/.julia/packages/ThermodynamicIntegration/e82iS/src/turing.jl:61 [3] evaluate_loglikelihood(model::DynamicPPL.Model{var"#gauss#5"{ZeroMeanDiagNormal{Tuple{Base.OneTo{Int64}}}, ZeroMeanDiagNormal{Tuple{Base.OneTo{Int64}}}}, (:y,), (), (), Tuple{Vector{Float64}}, Tuple{}, DynamicPPL.DefaultContext}, alg::ThermInt{:ForwardDiff, Random.TaskLocalRNG, Vector{Float64}}, β::Float64) @ ThermodynamicIntegration ~/.julia/packages/ThermodynamicIntegration/e82iS/src/turing.jl:49 [4] macro expansion @ ~/.julia/packages/ThermodynamicIntegration/e82iS/src/turing.jl:28 [inlined] [5] #42 @ ./threadingconstructs.jl:276 [inlined] [6] #40 @ ./threadingconstructs.jl:243 [inlined] [7] (::Base.Threads.var"#threading_run##0#threading_run##1"{ThermodynamicIntegration.var"#40#41"{ThermodynamicIntegration.var"#42#43"{@Kwargs{}, ThermInt{:ForwardDiff, Random.TaskLocalRNG, Vector{Float64}}, DynamicPPL.Model{var"#gauss#5"{ZeroMeanDiagNormal{Tuple{Base.OneTo{Int64}}}, ZeroMeanDiagNormal{Tuple{Base.OneTo{Int64}}}}, (:y,), (), (), Tuple{Vector{Float64}}, Tuple{}, DynamicPPL.DefaultContext}, ProgressMeter.Progress, Vector{ThermInt{:ForwardDiff, Random.TaskLocalRNG, Vector{Float64}}}, Vector{Float64}, UnitRange{Int64}}}, Int64})() @ Base.Threads ./threadingconstructs.jl:177 Stacktrace: [1] threading_run(fun::ThermodynamicIntegration.var"#40#41"{ThermodynamicIntegration.var"#42#43"{@Kwargs{}, ThermInt{:ForwardDiff, Random.TaskLocalRNG, Vector{Float64}}, DynamicPPL.Model{var"#gauss#5"{ZeroMeanDiagNormal{Tuple{Base.OneTo{Int64}}}, ZeroMeanDiagNormal{Tuple{Base.OneTo{Int64}}}}, (:y,), (), (), Tuple{Vector{Float64}}, Tuple{}, DynamicPPL.DefaultContext}, ProgressMeter.Progress, Vector{ThermInt{:ForwardDiff, Random.TaskLocalRNG, Vector{Float64}}}, Vector{Float64}, UnitRange{Int64}}}, static::Bool) @ Base.Threads ./threadingconstructs.jl:196 [2] macro expansion @ ./threadingconstructs.jl:213 [inlined] [3] (::ThermInt{:ForwardDiff, Random.TaskLocalRNG, Vector{Float64}})(model::DynamicPPL.Model{var"#gauss#5"{ZeroMeanDiagNormal{Tuple{Base.OneTo{Int64}}}, ZeroMeanDiagNormal{Tuple{Base.OneTo{Int64}}}}, (:y,), (), (), Tuple{Vector{Float64}}, Tuple{}, DynamicPPL.DefaultContext}, ::TIThreads; progress::Bool, kwargs::@Kwargs{}) @ ThermodynamicIntegration ~/.julia/packages/ThermodynamicIntegration/e82iS/src/turing.jl:26 [4] (::ThermInt{:ForwardDiff, Random.TaskLocalRNG, Vector{Float64}})(model::DynamicPPL.Model{var"#gauss#5"{ZeroMeanDiagNormal{Tuple{Base.OneTo{Int64}}}, ZeroMeanDiagNormal{Tuple{Base.OneTo{Int64}}}}, (:y,), (), (), Tuple{Vector{Float64}}, Tuple{}, DynamicPPL.DefaultContext}, ::TIThreads) @ ThermodynamicIntegration ~/.julia/packages/ThermodynamicIntegration/e82iS/src/turing.jl:17 [5] macro expansion @ ~/.julia/packages/ThermodynamicIntegration/e82iS/test/thermint.jl:35 [inlined] [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [7] test_basic_turing(alg::ThermInt{:ForwardDiff, Random.TaskLocalRNG, Vector{Float64}}, method::TIThreads; D::Int64, atol::Float64) @ Main ~/.julia/packages/ThermodynamicIntegration/e82iS/test/thermint.jl:28 [8] test_basic_turing(alg::ThermInt{:ForwardDiff, Random.TaskLocalRNG, Vector{Float64}}, method::TIThreads) @ Main ~/.julia/packages/ThermodynamicIntegration/e82iS/test/thermint.jl:24 [9] top-level scope @ ~/.julia/packages/ThermodynamicIntegration/e82iS/test/thermint.jl:43 [10] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [11] macro expansion @ ~/.julia/packages/ThermodynamicIntegration/e82iS/test/thermint.jl:50 [inlined] [12] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [13] top-level scope @ ~/.julia/packages/ThermodynamicIntegration/e82iS/test/runtests.jl:4 [14] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [15] macro expansion @ ~/.julia/packages/ThermodynamicIntegration/e82iS/test/runtests.jl:4 [inlined] [16] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [17] top-level scope @ none:6 [18] eval(m::Module, e::Any) @ Core ./boot.jl:489 [19] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [20] _start() @ Base ./client.jl:577 ┌ Warning: Only one process available, parallelization will not happen. Start Julia with `julia -p n` └ @ ThermodynamicIntegration ~/.julia/packages/ThermodynamicIntegration/e82iS/src/thermint.jl:97 ┌ Warning: progress is not possible with distributed computing for now. └ @ ThermodynamicIntegration ~/.julia/packages/ThermodynamicIntegration/e82iS/src/thermint.jl:109 ┌ Warning: Only one process available, parallelization will not happen. Start Julia with `julia -p n` └ @ ThermodynamicIntegration ~/.julia/packages/ThermodynamicIntegration/e82iS/src/thermint.jl:97 ┌ Warning: progress is not possible with distributed computing for now. └ @ ThermodynamicIntegration ~/.julia/packages/ThermodynamicIntegration/e82iS/src/turing.jl:38 Turing - ThermInt - TIDistributed: Error During Test at /home/pkgeval/.julia/packages/ThermodynamicIntegration/e82iS/test/thermint.jl:27 Got exception outside of a @test On worker 2: UndefVarError: `SampleFromPrior` not defined in `DynamicPPL` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] getproperty @ ./Base_compiler.jl:50 [inlined] [2] get_logprior @ ~/.julia/packages/ThermodynamicIntegration/e82iS/src/turing.jl:61 [3] evaluate_loglikelihood @ ~/.julia/packages/ThermodynamicIntegration/e82iS/src/turing.jl:49 [4] local_eval @ ~/.julia/packages/ThermodynamicIntegration/e82iS/src/turing.jl:42 [5] #exec_from_cache#152 @ /opt/julia/share/julia/stdlib/v1.14/Distributed/src/workerpool.jl:390 [6] exec_from_cache @ /opt/julia/share/julia/stdlib/v1.14/Distributed/src/workerpool.jl:388 [7] #handle_msg##4 @ /opt/julia/share/julia/stdlib/v1.14/Distributed/src/process_messages.jl:287 [8] run_work_thunk @ /opt/julia/share/julia/stdlib/v1.14/Distributed/src/process_messages.jl:70 [9] #handle_msg##2 @ /opt/julia/share/julia/stdlib/v1.14/Distributed/src/process_messages.jl:287 Stacktrace: [1] (::Base.var"#maptwice##0#maptwice##1")(x::Task) @ Base ./asyncmap.jl:173 [2] foreach(f::Base.var"#maptwice##0#maptwice##1", itr::Vector{Any}) @ Base ./abstractarray.jl:3206 [3] maptwice(wrapped_f::Function, chnl::Channel{Any}, worker_tasks::Vector{Any}, c::Vector{Float64}) @ Base ./asyncmap.jl:173 [4] wrap_n_exec_twice @ ./asyncmap.jl:149 [inlined] [5] #async_usemap#936 @ ./asyncmap.jl:99 [inlined] [6] async_usemap @ ./asyncmap.jl:80 [inlined] [7] #asyncmap#935 @ ./asyncmap.jl:77 [inlined] [8] asyncmap @ ./asyncmap.jl:76 [inlined] [9] pmap(f::Function, p::CachingPool, c::Vector{Float64}; distributed::Bool, batch_size::Int64, on_error::Nothing, retry_delays::Vector{Any}, retry_check::Nothing) @ Distributed /opt/julia/share/julia/stdlib/v1.14/Distributed/src/pmap.jl:126 [10] pmap @ /opt/julia/share/julia/stdlib/v1.14/Distributed/src/pmap.jl:99 [inlined] [11] (::ThermInt{:ForwardDiff, Random.TaskLocalRNG, Vector{Float64}})(model::DynamicPPL.Model{var"#gauss#5"{ZeroMeanDiagNormal{Tuple{Base.OneTo{Int64}}}, ZeroMeanDiagNormal{Tuple{Base.OneTo{Int64}}}}, (:y,), (), (), Tuple{Vector{Float64}}, Tuple{}, DynamicPPL.DefaultContext}, ::TIDistributed; progress::Bool, kwargs::@Kwargs{}) @ ThermodynamicIntegration ~/.julia/packages/ThermodynamicIntegration/e82iS/src/turing.jl:44 [12] (::ThermInt{:ForwardDiff, Random.TaskLocalRNG, Vector{Float64}})(model::DynamicPPL.Model{var"#gauss#5"{ZeroMeanDiagNormal{Tuple{Base.OneTo{Int64}}}, ZeroMeanDiagNormal{Tuple{Base.OneTo{Int64}}}}, (:y,), (), (), Tuple{Vector{Float64}}, Tuple{}, DynamicPPL.DefaultContext}, ::TIDistributed) @ ThermodynamicIntegration ~/.julia/packages/ThermodynamicIntegration/e82iS/src/turing.jl:34 [13] macro expansion @ ~/.julia/packages/ThermodynamicIntegration/e82iS/test/thermint.jl:35 [inlined] [14] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [15] test_basic_turing(alg::ThermInt{:ForwardDiff, Random.TaskLocalRNG, Vector{Float64}}, method::TIDistributed; D::Int64, atol::Float64) @ Main ~/.julia/packages/ThermodynamicIntegration/e82iS/test/thermint.jl:28 [16] test_basic_turing(alg::ThermInt{:ForwardDiff, Random.TaskLocalRNG, Vector{Float64}}, method::TIDistributed) @ Main ~/.julia/packages/ThermodynamicIntegration/e82iS/test/thermint.jl:24 [17] top-level scope @ ~/.julia/packages/ThermodynamicIntegration/e82iS/test/thermint.jl:43 [18] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [19] macro expansion @ ~/.julia/packages/ThermodynamicIntegration/e82iS/test/thermint.jl:63 [inlined] [20] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [21] top-level scope @ ~/.julia/packages/ThermodynamicIntegration/e82iS/test/runtests.jl:4 [22] macro expansion @ /opt/julia/share/julia/stdlib/v1.14/Test/src/Test.jl:1961 [inlined] [23] macro expansion @ ~/.julia/packages/ThermodynamicIntegration/e82iS/test/runtests.jl:4 [inlined] [24] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [25] top-level scope @ none:6 [26] eval(m::Module, e::Any) @ Core ./boot.jl:489 [27] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [28] _start() @ Base ./client.jl:577 Test Summary: | Pass Error Total Time ThermodynamicIntegration.jl | 6 3 9 8m05.4s Test basic model with different options | 6 3 9 2m24.0s ThermInt - TISerial | 2 2 17.2s Turing - ThermInt - TISerial | 1 1 10.2s ThermInt - TIThreads | 2 2 9.7s Turing - ThermInt - TIThreads | 1 1 1.1s ThermInt - TIDistributed | 2 2 30.6s Turing - ThermInt - TIDistributed | 1 1 15.6s RNG of the outermost testset: Random.Xoshiro(0xf0b224697a134e62, 0x091dcf67b698f76e, 0x51c554e7d99ed9dc, 0x76f5459144092176, 0xe59b2220ba386032) ERROR: LoadError: Some tests did not pass: 6 passed, 0 failed, 3 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/ThermodynamicIntegration/e82iS/test/runtests.jl:3 Testing failed after 423.81s ERROR: LoadError: Package ThermodynamicIntegration errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2946 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2795 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:572 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:548 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [12] include(mod::Module, _path::String) @ Base ./Base.jl:309 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 590.15s: package tests unexpectedly errored