Package evaluation to test SegmentAnything on Julia 1.14.0-DEV.30 (073666df8b*) started at 2025-11-04T17:34:03.261 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.68s ################################################################################ # Installation # Installing SegmentAnything... Resolving package versions... Installed SegmentAnything ─ v0.1.0 Updating `~/.julia/environments/v1.14/Project.toml` [daca4e5c] + SegmentAnything v0.1.0 Updating `~/.julia/environments/v1.14/Manifest.toml` ⌅ [3da002f7] + ColorTypes v0.11.5 [992eb4ea] + CondaPkg v0.2.33 [187b0558] + ConstructionBase v1.6.0 [9a962f9c] + DataAPI v1.16.0 [e2d170a0] + DataValueInterfaces v1.0.0 [411431e0] + Extents v0.1.6 [53c48c17] + FixedPointNumbers v0.8.5 [68eda718] + GeoFormatTypes v0.4.4 ⌃ [cf35fbd7] + GeoInterface v1.4.1 ⌅ [5c1252a2] + GeometryBasics v0.4.11 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [0f8b85d8] + JSON3 v1.14.3 [1914dd2f] + MacroTools v0.5.16 [0b3b1443] + MicroMamba v0.1.14 [bac558e1] + OrderedCollections v1.8.1 [69de0a69] + Parsers v2.8.3 [fa939f87] + Pidfile v1.3.0 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [6099a3de] + PythonCall v0.9.28 [6c6a2e73] + Scratch v1.3.0 [daca4e5c] + SegmentAnything v0.1.0 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 ⌅ [09ab397b] + StructArrays v0.6.21 [856f2bd8] + StructTypes v1.11.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [e17b2a0c] + UnsafePointers v1.0.0 [5ae413db] + EarCut_jll v2.2.4+0 ⌅ [f8abcde7] + micromamba_jll v1.5.12+0 [4d7b5844] + pixi_jll v0.41.3+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.16.0+0 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.9.9 [4536629a] + OpenBLAS_jll v0.3.29+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.67.1+0 [3f19e933] + p7zip_jll v17.6.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Building SegmentAnything → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/2ab97b53a7102de401626a629e5584678ff86343/build.log` Installation completed after 23.97s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Error: Failed to use TestEnv.jl; test dependencies will not be precompiled │ exception = │ UndefVarError: `project_rel_path` not defined in `TestEnv` │ Suggestion: this global was defined as `Pkg.Operations.project_rel_path` but not assigned a value. │ Stacktrace: │ [1] get_test_dir(ctx::Pkg.Types.Context, pkgspec::PackageSpec) │ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:75 │ [2] test_dir_has_project_file │ @ ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:52 [inlined] │ [3] maybe_gen_project_override! │ @ ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:83 [inlined] │ [4] activate(pkg::String; allow_reresolve::Bool) │ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:12 │ [5] activate(pkg::String) │ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:9 │ [6] top-level scope │ @ /PkgEval.jl/scripts/precompile.jl:24 │ [7] include(mod::Module, _path::String) │ @ Base ./Base.jl:309 │ [8] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:344 │ [9] _start() │ @ Base ./client.jl:577 └ @ Main /PkgEval.jl/scripts/precompile.jl:26 Precompiling package dependencies... Precompiling packages... 10469.0 ms ✓ GeometryBasics 151934.2 ms ✓ SegmentAnything 2 dependencies successfully precompiled in 172 seconds. 70 already precompiled. 1 dependency had output during precompilation: ┌ SegmentAnything │ CondaPkg Found dependencies: /home/pkgeval/.julia/packages/SegmentAnything/uDUsK/CondaPkg.toml │ CondaPkg Found dependencies: /home/pkgeval/.julia/packages/CondaPkg/0UqYV/CondaPkg.toml │ CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PythonCall/mkWc2/CondaPkg.toml │ CondaPkg Resolving changes │ + numpy │ + opencv │ + openssl │ + python │ + pytorch │ + pytorch-cuda │ + segment-anything (pip) │ + torchaudio │ + torchvision │ + uv │ CondaPkg Initialising pixi │ │ /home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi │ │ init │ │ --format pixi │ └ /home/pkgeval/.julia/environments/v1.14/.CondaPkg │ ✔ Created /home/pkgeval/.julia/environments/v1.14/.CondaPkg/pixi.toml │ CondaPkg Wrote /home/pkgeval/.julia/environments/v1.14/.CondaPkg/pixi.toml │ │ [dependencies] │ │ numpy = "*" │ │ openssl = ">=3, <3.6" │ │ uv = ">=0.4" │ │ pytorch = "*" │ │ opencv = "*" │ │ pytorch-cuda = "*" │ │ torchaudio = "*" │ │ torchvision = "*" │ │ │ │ [dependencies.python] │ │ version = ">=3.9,<4" │ │ build = "*cp*" │ │ channel = "conda-forge" │ │ │ │ [pypi-dependencies.segment-anything] │ │ git = "https://github.com/facebookresearch/segment-anything.git" │ │ │ │ [project] │ │ name = ".CondaPkg" │ │ description = "automatically generated by CondaPkg.jl" │ │ platforms = ["linux-64"] │ │ channel-priority = "strict" │ └ channels = ["conda-forge", "nvidia", "pytorch"] │ CondaPkg Installing packages │ │ /home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi │ │ install │ └ --manifest-path /home/pkgeval/.julia/environments/v1.14/.CondaPkg/pixi.toml │ ✔ The default environment has been installed. └ Precompilation completed after 168.79s ################################################################################ # Testing # Testing SegmentAnything Status `/tmp/jl_2g0LEf/Project.toml` ⌅ [3da002f7] ColorTypes v0.11.5 [992eb4ea] CondaPkg v0.2.33 ⌅ [5c1252a2] GeometryBasics v0.4.11 [6099a3de] PythonCall v0.9.28 [daca4e5c] SegmentAnything v0.1.0 [f43a241f] Downloads v1.7.0 Status `/tmp/jl_2g0LEf/Manifest.toml` ⌅ [3da002f7] ColorTypes v0.11.5 [992eb4ea] CondaPkg v0.2.33 [187b0558] ConstructionBase v1.6.0 [9a962f9c] DataAPI v1.16.0 [e2d170a0] DataValueInterfaces v1.0.0 [411431e0] Extents v0.1.6 [53c48c17] FixedPointNumbers v0.8.5 [68eda718] GeoFormatTypes v0.4.4 ⌃ [cf35fbd7] GeoInterface v1.4.1 ⌅ [5c1252a2] GeometryBasics v0.4.11 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [0f8b85d8] JSON3 v1.14.3 [1914dd2f] MacroTools v0.5.16 [0b3b1443] MicroMamba v0.1.14 [bac558e1] OrderedCollections v1.8.1 [69de0a69] Parsers v2.8.3 [fa939f87] Pidfile v1.3.0 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 [6099a3de] PythonCall v0.9.28 [6c6a2e73] Scratch v1.3.0 [daca4e5c] SegmentAnything v0.1.0 [90137ffa] StaticArrays v1.9.15 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 ⌅ [09ab397b] StructArrays v0.6.21 [856f2bd8] StructTypes v1.11.0 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [e17b2a0c] UnsafePointers v1.0.0 [5ae413db] EarCut_jll v2.2.4+0 ⌅ [f8abcde7] micromamba_jll v1.5.12+0 [4d7b5844] pixi_jll v0.41.3+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.16.0+0 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.9.9 [4536629a] OpenBLAS_jll v0.3.29+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.47.0+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.67.1+0 [3f19e933] p7zip_jll v17.6.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... CondaPkg Found dependencies: /home/pkgeval/.julia/packages/SegmentAnything/uDUsK/CondaPkg.toml CondaPkg Found dependencies: /home/pkgeval/.julia/packages/CondaPkg/0UqYV/CondaPkg.toml CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PythonCall/mkWc2/CondaPkg.toml CondaPkg Resolving changes + numpy + opencv + openssl + python + pytorch + pytorch-cuda + segment-anything (pip) + torchaudio + torchvision + uv CondaPkg Initialising pixi │ /home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi │ init │ --format pixi └ /tmp/jl_2g0LEf/.CondaPkg ✔ Created /tmp/jl_2g0LEf/.CondaPkg/pixi.toml CondaPkg Wrote /tmp/jl_2g0LEf/.CondaPkg/pixi.toml │ [dependencies] │ numpy = "*" │ openssl = ">=3, <3.6" │ uv = ">=0.4" │ pytorch = "*" │ opencv = "*" │ pytorch-cuda = "*" │ torchaudio = "*" │ torchvision = "*" │ │ [dependencies.python] │ version = ">=3.9,<4" │ build = "*cp*" │ channel = "conda-forge" │ │ [pypi-dependencies.segment-anything] │ git = "https://github.com/facebookresearch/segment-anything.git" │ │ [project] │ name = ".CondaPkg" │ description = "automatically generated by CondaPkg.jl" │ platforms = ["linux-64"] │ channel-priority = "strict" └ channels = ["conda-forge", "nvidia", "pytorch"] CondaPkg Installing packages │ /home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi │ install └ --manifest-path /tmp/jl_2g0LEf/.CondaPkg/pixi.toml ✔ The default environment has been installed. ERROR: LoadError: InitError: Python: OSError: libmkl_gnu_thread.so.2: cannot open shared object file: No such file or directory Python stacktrace: [1] __init__ @ ctypes /tmp/jl_2g0LEf/.CondaPkg/.pixi/envs/default/lib/python3.13/ctypes/__init__.py:390 [2] _load_global_deps @ /tmp/jl_2g0LEf/.CondaPkg/.pixi/envs/default/lib/python3.13/site-packages/torch/__init__.py:320 [3] _load_global_deps @ /tmp/jl_2g0LEf/.CondaPkg/.pixi/envs/default/lib/python3.13/site-packages/torch/__init__.py:371 [4] @ /tmp/jl_2g0LEf/.CondaPkg/.pixi/envs/default/lib/python3.13/site-packages/torch/__init__.py:415 [5] @ /tmp/jl_2g0LEf/.CondaPkg/.pixi/envs/default/lib/python3.13/site-packages/segment_anything/build_sam.py:7 [6] @ /tmp/jl_2g0LEf/.CondaPkg/.pixi/envs/default/lib/python3.13/site-packages/segment_anything/__init__.py:7 Stacktrace: [1] pythrow() @ PythonCall.Core ~/.julia/packages/PythonCall/mkWc2/src/Core/err.jl:77 [2] errcheck @ ~/.julia/packages/PythonCall/mkWc2/src/Core/err.jl:10 [inlined] [3] pyimport(m::String) @ PythonCall.Core ~/.julia/packages/PythonCall/mkWc2/src/Core/builtins.jl:1458 [4] __init__() @ SegmentAnything ~/.julia/packages/SegmentAnything/uDUsK/src/SegmentAnything.jl:25 [5] run_module_init(mod::Module, i::Int64) @ Base ./loading.jl:1458 [6] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) @ Base ./loading.jl:1446 [7] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}; register::Bool) @ Base ./loading.jl:1334 [8] _include_from_serialized @ ./loading.jl:1291 [inlined] [9] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String}) @ Base ./loading.jl:2166 [10] _require_search_from_serialized @ ./loading.jl:2060 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2710 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2576 [13] macro expansion @ ./loading.jl:2504 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2468 [16] require @ ./loading.jl:2444 [inlined] [17] eval_import_path @ ./module.jl:36 [inlined] [18] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [19] _eval_using @ ./module.jl:137 [inlined] [20] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [21] top-level scope @ ~/.julia/packages/SegmentAnything/uDUsK/test/runtests.jl:1 [22] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [23] top-level scope @ none:6 [24] eval(m::Module, e::Any) @ Core ./boot.jl:489 [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [26] _start() @ Base ./client.jl:577 during initialization of module SegmentAnything in expression starting at /home/pkgeval/.julia/packages/SegmentAnything/uDUsK/test/runtests.jl:1 Testing failed after 92.92s ERROR: LoadError: Package SegmentAnything errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2946 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2795 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:572 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:548 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [12] include(mod::Module, _path::String) @ Base ./Base.jl:309 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 343.25s: package requires a missing binary dependency