Package evaluation to test GraphKernels on Julia 1.14.0-DEV.30 (073666df8b*) started at 2025-11-04T19:55:02.914 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.03s ################################################################################ # Installation # Installing GraphKernels... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [fe1457df] + GraphKernels v0.2.0 Updating `~/.julia/environments/v1.14/Manifest.toml` [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [ec485272] + ArnoldiMethod v0.4.0 [198e06fe] + BangBang v0.4.6 [9718e550] + Baselet v0.1.1 [d360d2e6] + ChainRulesCore v1.26.0 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.6.0 [9a962f9c] + DataAPI v1.16.0 ⌅ [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [244e2a9f] + DefineSingletons v0.1.2 [b4f34e82] + Distances v0.10.12 [ffbed154] + DocStringExtensions v0.9.5 [1a297f60] + FillArrays v1.14.0 [d9f16b24] + Functors v0.5.2 [fe1457df] + GraphKernels v0.2.0 [86223c79] + Graphs v1.13.1 [d25df0c9] + Inflate v0.1.5 [22cec73e] + InitialValues v0.3.1 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [ec8451be] + KernelFunctions v0.10.66 ⌅ [2d691ee1] + LIBLINEAR v0.6.0 ⌅ [b1bec4e5] + LIBSVM v0.7.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [128add7d] + MicroCollections v0.2.0 [e1d29d7a] + Missings v1.2.0 [bac558e1] + OrderedCollections v1.8.1 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [43287f4e] + PtrArrays v1.3.0 [42d2dcc6] + Referenceables v0.1.3 [ae029012] + Requires v1.3.1 [6e75b9c4] + ScikitLearnBase v0.5.0 [efcf1570] + Setfield v1.1.2 [699a6c99] + SimpleTraits v0.9.5 [b43c691f] + SimpleValueGraphs v0.4.1 [47aef6b3] + SimpleWeightedGraphs v1.5.0 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [171d559e] + SplittablesBase v0.1.15 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.7 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [62fd8b95] + TensorCore v0.1.1 [ac1d9e8a] + ThreadsX v0.1.12 [28d57a85] + Transducers v0.4.85 [700de1a5] + ZygoteRules v0.2.7 [1d63c593] + LLVMOpenMP_jll v18.1.8+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [275f1f90] + liblinear_jll v2.47.0+0 [08558c22] + libsvm_jll v3.25.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.16.0+0 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.9.9 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.67.1+0 [3f19e933] + p7zip_jll v17.6.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 4.96s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Error: Failed to use TestEnv.jl; test dependencies will not be precompiled │ exception = │ UndefVarError: `project_rel_path` not defined in `TestEnv` │ Suggestion: this global was defined as `Pkg.Operations.project_rel_path` but not assigned a value. │ Stacktrace: │ [1] get_test_dir(ctx::Pkg.Types.Context, pkgspec::PackageSpec) │ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:75 │ [2] test_dir_has_project_file │ @ ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:52 [inlined] │ [3] maybe_gen_project_override! │ @ ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:83 [inlined] │ [4] activate(pkg::String; allow_reresolve::Bool) │ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:12 │ [5] activate(pkg::String) │ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:9 │ [6] top-level scope │ @ /PkgEval.jl/scripts/precompile.jl:24 │ [7] include(mod::Module, _path::String) │ @ Base ./Base.jl:309 │ [8] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:344 │ [9] _start() │ @ Base ./client.jl:577 └ @ Main /PkgEval.jl/scripts/precompile.jl:26 Precompiling package dependencies... Precompiling packages... 1483.6 ms ✓ LIBLINEAR 9319.6 ms ✓ KernelFunctions 10014.8 ms ✓ Graphs 2101.3 ms ✓ Transducers → TransducersReferenceablesExt 3422.9 ms ✓ LIBSVM 4089.7 ms ✓ SimpleWeightedGraphs 4024.3 ms ✓ ThreadsX 4797.5 ms ✓ SimpleValueGraphs 5140.7 ms ✓ GraphKernels 9 dependencies successfully precompiled in 46 seconds. 118 already precompiled. 1 dependency had output during precompilation: ┌ SimpleValueGraphs │ WARNING: Constructor for type "SimpleGraph" was extended in `SimpleValueGraphs` without explicit qualification or import. │ NOTE: Assumed "SimpleGraph" refers to `SimpleGraphs.SimpleGraph`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function SimpleGraph end`. │ Hint: To silence the warning, qualify `SimpleGraph` as `SimpleGraphs.SimpleGraph` in the method signature or explicitly `import SimpleGraphs: SimpleGraph`. │ WARNING: Constructor for type "SimpleDiGraph" was extended in `SimpleValueGraphs` without explicit qualification or import. │ NOTE: Assumed "SimpleDiGraph" refers to `SimpleGraphs.SimpleDiGraph`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function SimpleDiGraph end`. │ Hint: To silence the warning, qualify `SimpleDiGraph` as `SimpleGraphs.SimpleDiGraph` in the method signature or explicitly `import SimpleGraphs: SimpleDiGraph`. └ Precompilation completed after 56.95s ################################################################################ # Testing # Testing GraphKernels Status `/tmp/jl_UEhcG6/Project.toml` ⌅ [864edb3b] DataStructures v0.18.22 [fe1457df] GraphKernels v0.2.0 [86223c79] Graphs v1.13.1 [ec8451be] KernelFunctions v0.10.66 ⌅ [b1bec4e5] LIBSVM v0.7.0 [b43c691f] SimpleValueGraphs v0.4.1 [10745b16] Statistics v1.11.1 [ac1d9e8a] ThreadsX v0.1.12 [37e2e46d] LinearAlgebra v1.13.0 [9a3f8284] Random v1.11.0 [2f01184e] SparseArrays v1.13.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_UEhcG6/Manifest.toml` [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [dce04be8] ArgCheck v2.5.0 [ec485272] ArnoldiMethod v0.4.0 [198e06fe] BangBang v0.4.6 [9718e550] Baselet v0.1.1 [d360d2e6] ChainRulesCore v1.26.0 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [187b0558] ConstructionBase v1.6.0 [9a962f9c] DataAPI v1.16.0 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [244e2a9f] DefineSingletons v0.1.2 [b4f34e82] Distances v0.10.12 [ffbed154] DocStringExtensions v0.9.5 [1a297f60] FillArrays v1.14.0 [d9f16b24] Functors v0.5.2 [fe1457df] GraphKernels v0.2.0 [86223c79] Graphs v1.13.1 [d25df0c9] Inflate v0.1.5 [22cec73e] InitialValues v0.3.1 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [ec8451be] KernelFunctions v0.10.66 ⌅ [2d691ee1] LIBLINEAR v0.6.0 ⌅ [b1bec4e5] LIBSVM v0.7.0 [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.16 [128add7d] MicroCollections v0.2.0 [e1d29d7a] Missings v1.2.0 [bac558e1] OrderedCollections v1.8.1 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 [43287f4e] PtrArrays v1.3.0 [42d2dcc6] Referenceables v0.1.3 [ae029012] Requires v1.3.1 [6e75b9c4] ScikitLearnBase v0.5.0 [efcf1570] Setfield v1.1.2 [699a6c99] SimpleTraits v0.9.5 [b43c691f] SimpleValueGraphs v0.4.1 [47aef6b3] SimpleWeightedGraphs v1.5.0 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.6.1 [171d559e] SplittablesBase v0.1.15 [90137ffa] StaticArrays v1.9.15 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.7 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [62fd8b95] TensorCore v0.1.1 [ac1d9e8a] ThreadsX v0.1.12 [28d57a85] Transducers v0.4.85 [700de1a5] ZygoteRules v0.2.7 [1d63c593] LLVMOpenMP_jll v18.1.8+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [275f1f90] liblinear_jll v2.47.0+0 [08558c22] libsvm_jll v3.25.0+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.16.0+0 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.9.9 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.67.1+0 [3f19e933] p7zip_jll v17.6.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Test Summary: | Total Time GraphKernels.jl | 0 0.1s Testing GraphKernels tests passed Testing completed after 13.16s PkgEval succeeded after 96.01s