Package evaluation to test Ggplot2 on Julia 1.14.0-DEV.30 (073666df8b*) started at 2025-11-04T19:48:17.519 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 10.56s ################################################################################ # Installation # Installing Ggplot2... Resolving package versions... Installed Rmath_jll ─────────────────── v0.5.1+0 Installed HypergeometricFunctions ───── v0.3.28 Installed InlineStrings ─────────────── v1.4.5 Installed AliasTables ───────────────── v1.1.3 Installed StatsModels ───────────────── v0.7.7 Installed DataStructures ────────────── v0.18.22 Installed RCall ─────────────────────── v0.14.9 Installed VersionParsing ────────────── v1.3.0 Installed StatsBase ─────────────────── v0.34.7 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed DataAPI ───────────────────── v1.16.0 Installed InvertedIndices ───────────── v1.3.1 Installed Compat ────────────────────── v4.18.1 Installed OrderedCollections ────────── v1.8.1 Installed ShiftedArrays ─────────────── v2.0.0 Installed Statistics ────────────────── v1.11.1 Installed DataValueInterfaces ───────── v1.0.0 Installed StatsAPI ──────────────────── v1.7.1 Installed IrrationalConstants ───────── v0.2.6 Installed SentinelArrays ────────────── v1.4.8 Installed Conda ─────────────────────── v1.10.3 Installed StructUtils ───────────────── v2.5.1 Installed WinReg ────────────────────── v1.0.0 Installed PrecompileTools ───────────── v1.3.3 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed Requires ──────────────────── v1.3.1 Installed StringManipulation ────────── v0.4.1 Installed Parsers ───────────────────── v2.8.3 Installed LogExpFunctions ───────────── v0.3.29 Installed JSON ──────────────────────── v1.2.0 Installed Rmath ─────────────────────── v0.9.0 Installed StatsFuns ─────────────────── v1.5.2 Installed Tables ────────────────────── v1.12.1 Installed Ggplot2 ───────────────────── v0.0.1 Installed PtrArrays ─────────────────── v1.3.0 Installed PrettyTables ──────────────── v3.1.0 Installed Reexport ──────────────────── v1.2.2 Installed Missings ──────────────────── v1.2.0 Installed PooledArrays ──────────────── v1.4.3 Installed SpecialFunctions ──────────── v2.6.1 Installed JLLWrappers ───────────────── v1.7.1 Installed DataFrames ────────────────── v1.8.1 Installed Preferences ───────────────── v1.5.0 Installed TableTraits ───────────────── v1.0.1 Installed Crayons ───────────────────── v4.1.1 Installed LaTeXStrings ──────────────── v1.4.0 Installed SortingAlgorithms ─────────── v1.2.2 Installed DocStringExtensions ───────── v0.9.5 Installed CategoricalArrays ─────────── v1.0.2 Installing 2 artifacts Installed artifact OpenSpecFun 194.9 KiB Installed artifact Rmath 121.9 KiB Updating `~/.julia/environments/v1.14/Project.toml` [5eb46db9] + Ggplot2 v0.0.1 Updating `~/.julia/environments/v1.14/Manifest.toml` [66dad0bd] + AliasTables v1.1.3 [324d7699] + CategoricalArrays v1.0.2 [34da2185] + Compat v4.18.1 [8f4d0f93] + Conda v1.10.3 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 ⌅ [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [ffbed154] + DocStringExtensions v0.9.5 [5eb46db9] + Ggplot2 v0.0.1 [34004b35] + HypergeometricFunctions v0.3.28 [842dd82b] + InlineStrings v1.4.5 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [682c06a0] + JSON v1.2.0 [b964fa9f] + LaTeXStrings v1.4.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e1d29d7a] + Missings v1.2.0 [bac558e1] + OrderedCollections v1.8.1 [69de0a69] + Parsers v2.8.3 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [08abe8d2] + PrettyTables v3.1.0 [43287f4e] + PtrArrays v1.3.0 [6f49c342] + RCall v0.14.9 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [91c51154] + SentinelArrays v1.4.8 [1277b4bf] + ShiftedArrays v2.0.0 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.7 [4c63d2b9] + StatsFuns v1.5.2 [3eaba693] + StatsModels v0.7.7 [892a3eda] + StringManipulation v0.4.1 [ec057cc2] + StructUtils v2.5.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [81def892] + VersionParsing v1.3.0 [1b915085] + WinReg v1.0.0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v1.0.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [ca575930] + NetworkOptions v1.3.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.16.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.9.9 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.67.1+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building Conda → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/8f06b0cfa4c514c7b9546756dbae91fcfbc92dc9/build.log` Building RCall → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/7521292e0ca900751cf0f35f2a2faf1cb321e960/build.log` Installation completed after 149.41s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4743.7 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. 1 dependency had output during precompilation: ┌ TestEnv │ WARNING: Imported binding Operations.project_rel_path was undeclared at import time during import to TestEnv. └ ┌ Error: Failed to use TestEnv.jl; test dependencies will not be precompiled │ exception = │ UndefVarError: `project_rel_path` not defined in `TestEnv` │ Suggestion: this global was defined as `Pkg.Operations.project_rel_path` but not assigned a value. │ Stacktrace: │ [1] get_test_dir(ctx::Pkg.Types.Context, pkgspec::PackageSpec) │ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:75 │ [2] test_dir_has_project_file │ @ ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:52 [inlined] │ [3] maybe_gen_project_override! │ @ ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:83 [inlined] │ [4] activate(pkg::String; allow_reresolve::Bool) │ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:12 │ [5] activate(pkg::String) │ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:9 │ [6] top-level scope │ @ /PkgEval.jl/scripts/precompile.jl:24 │ [7] include(mod::Module, _path::String) │ @ Base ./Base.jl:309 │ [8] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:344 │ [9] _start() │ @ Base ./client.jl:577 └ @ Main /PkgEval.jl/scripts/precompile.jl:26 Precompiling package dependencies... Precompiling packages... 1633.7 ms ✓ InlineStrings 784.4 ms ✓ Reexport 1091.8 ms ✓ Statistics 820.9 ms ✓ DataAPI 1979.6 ms ✓ IrrationalConstants 737.4 ms ✓ DataValueInterfaces 851.1 ms ✓ StatsAPI 1152.5 ms ✓ Requires 1252.4 ms ✓ OrderedCollections 808.8 ms ✓ InvertedIndices 224259.1 ms ✓ Ggplot2 1.1 ms ✓ DocStringExtensions 0.9 ms ✓ ShiftedArrays 872.4 ms ✓ VersionParsing 790.5 ms ✓ WinReg 1.0 ms ✓ PtrArrays 0.8 ms ✓ IteratorInterfaceExtensions 0.9 ms ✓ LaTeXStrings 1.5 ms ✓ Crayons 1.9 ms ✓ SentinelArrays 1405.9 ms ✓ StructUtils 1.1 ms ✓ Compat 1.2 ms ✓ Preferences 194.4 ms ✓ Statistics → SparseArraysExt 1.0 ms ✓ Missings 1.2 ms ✓ PooledArrays 1.5 ms ✓ LogExpFunctions 1.0 ms ✓ AliasTables 1.1 ms ✓ TableTraits 1.2 ms ✓ Compat → CompatLinearAlgebraExt 1.6 ms ✓ JLLWrappers 1.3 ms ✓ PrecompileTools 2.0 ms ✓ Tables 4.1 ms ✓ DataStructures 2.1 ms ✓ CategoricalArrays 1.5 ms ✓ Rmath_jll 1.0 ms ✓ OpenSpecFun_jll 2.0 ms ✓ StringManipulation 16040.3 ms ✓ Parsers 830.8 ms ✓ StructUtils → StructUtilsTablesExt 4.3 ms ✓ SortingAlgorithms 2.7 ms ✓ CategoricalArrays → CategoricalArraysSentinelArraysExt 1.3 ms ✓ Rmath 3.1 ms ✓ SpecialFunctions 31.7 ms ✓ PrettyTables 6978.5 ms ✓ JSON 889.0 ms ✓ InlineStrings → ParsersExt 4.9 ms ✓ StatsBase 3.5 ms ✓ HypergeometricFunctions 26.1 ms ✓ DataFrames 2394.4 ms ✓ Conda 1095.7 ms ✓ CategoricalArrays → CategoricalArraysJSONExt 3.7 ms ✓ CategoricalArrays → CategoricalArraysStatsBaseExt 30.3 ms ✓ StatsFuns 4.3 ms ✓ StatsModels 20 dependencies successfully precompiled in 267 seconds. 28 already precompiled. Precompilation completed after 281.32s ################################################################################ # Testing # Testing Ggplot2 Status `/tmp/jl_hzNXTH/Project.toml` [5eb46db9] Ggplot2 v0.0.1 [6f49c342] RCall v0.14.9 [8dfed614] Test v1.11.0 Status `/tmp/jl_hzNXTH/Manifest.toml` [66dad0bd] AliasTables v1.1.3 [324d7699] CategoricalArrays v1.0.2 [34da2185] Compat v4.18.1 [8f4d0f93] Conda v1.10.3 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [ffbed154] DocStringExtensions v0.9.5 [5eb46db9] Ggplot2 v0.0.1 [34004b35] HypergeometricFunctions v0.3.28 [842dd82b] InlineStrings v1.4.5 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v1.2.0 [b964fa9f] LaTeXStrings v1.4.0 [2ab3a3ac] LogExpFunctions v0.3.29 [e1d29d7a] Missings v1.2.0 [bac558e1] OrderedCollections v1.8.1 [69de0a69] Parsers v2.8.3 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 [08abe8d2] PrettyTables v3.1.0 [43287f4e] PtrArrays v1.3.0 [6f49c342] RCall v0.14.9 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [91c51154] SentinelArrays v1.4.8 [1277b4bf] ShiftedArrays v2.0.0 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.6.1 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.7 [4c63d2b9] StatsFuns v1.5.2 [3eaba693] StatsModels v0.7.7 [892a3eda] StringManipulation v0.4.1 [ec057cc2] StructUtils v2.5.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [81def892] VersionParsing v1.3.0 [1b915085] WinReg v1.0.0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [b27032c2] LibCURL v1.0.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [ca575930] NetworkOptions v1.3.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.16.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.9.9 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.67.1+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... ERROR: LoadError: InitError: REvalError: Error in library(ggplot2) : there is no package called ‘ggplot2’ Stacktrace: [1] handle_eval_stderr(; as_warning::Bool) @ RCall ~/.julia/packages/RCall/GLHIY/src/io.jl:173 [2] handle_eval_stderr @ ~/.julia/packages/RCall/GLHIY/src/io.jl:167 [inlined] [3] reval_p(expr::Ptr{RCall.LangSxp}, env::Ptr{RCall.EnvSxp}) @ RCall ~/.julia/packages/RCall/GLHIY/src/eval.jl:103 [4] reval_p(expr::Ptr{RCall.ExprSxp}, env::Ptr{RCall.EnvSxp}) @ RCall ~/.julia/packages/RCall/GLHIY/src/eval.jl:119 [5] reval(str::String, env::RCall.RObject{RCall.EnvSxp}) @ RCall ~/.julia/packages/RCall/GLHIY/src/eval.jl:136 [6] macro expansion @ ~/.julia/packages/RCall/GLHIY/src/macros.jl:74 [inlined] [7] __init__() @ Ggplot2 ~/.julia/packages/Ggplot2/dMFpR/src/Ggplot2.jl:8 [8] run_module_init(mod::Module, i::Int64) @ Base ./loading.jl:1458 [9] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) @ Base ./loading.jl:1446 [10] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}; register::Bool) @ Base ./loading.jl:1334 [11] _include_from_serialized @ ./loading.jl:1291 [inlined] [12] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String}) @ Base ./loading.jl:2166 [13] _require_search_from_serialized @ ./loading.jl:2060 [inlined] [14] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2710 [15] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2576 [16] macro expansion @ ./loading.jl:2504 [inlined] [17] macro expansion @ ./lock.jl:376 [inlined] [18] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2468 [19] require @ ./loading.jl:2444 [inlined] [20] eval_import_path @ ./module.jl:36 [inlined] [21] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [22] _eval_using @ ./module.jl:137 [inlined] [23] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [24] top-level scope @ ~/.julia/packages/Ggplot2/dMFpR/test/runtests.jl:1 [25] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [26] top-level scope @ none:6 [27] eval(m::Module, e::Any) @ Core ./boot.jl:489 [28] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [29] _start() @ Base ./client.jl:577 during initialization of module Ggplot2 in expression starting at /home/pkgeval/.julia/packages/Ggplot2/dMFpR/test/runtests.jl:1 Testing failed after 24.0s ERROR: LoadError: Package Ggplot2 errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2946 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2795 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:572 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:548 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [12] include(mod::Module, _path::String) @ Base ./Base.jl:309 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 535.21s: package tests unexpectedly errored