Package evaluation to test CrystalInfoContainers on Julia 1.14.0-DEV.30 (073666df8b*) started at 2025-11-04T16:06:06.712 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.83s ################################################################################ # Installation # Installing CrystalInfoContainers... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [0536147b] + CrystalInfoContainers v0.1.1 Updating `~/.julia/environments/v1.14/Manifest.toml` [34da2185] + Compat v4.18.1 [a8cc5b0e] + Crayons v4.1.1 [0536147b] + CrystalInfoContainers v0.1.1 ⌅ [6007d9b0] + CrystalInfoFramework v1.1.0 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 ⌅ [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [842dd82b] + InlineStrings v1.4.5 [41ab1584] + InvertedIndices v1.3.1 [82899510] + IteratorInterfaceExtensions v1.0.0 [b964fa9f] + LaTeXStrings v1.4.0 [d42ef402] + Lerche v0.5.7 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [bac558e1] + OrderedCollections v1.8.1 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [08abe8d2] + PrettyTables v3.1.0 [189a3867] + Reexport v1.2.2 [91c51154] + SentinelArrays v1.4.8 [a2af1166] + SortingAlgorithms v1.2.2 [10745b16] + Statistics v1.11.1 [892a3eda] + StringManipulation v0.4.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [5c2747f8] + URIs v1.6.1 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [6462fe0b] + Sockets v1.11.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [8e850b90] + libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 4.04s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Error: Failed to use TestEnv.jl; test dependencies will not be precompiled │ exception = │ UndefVarError: `project_rel_path` not defined in `TestEnv` │ Suggestion: this global was defined as `Pkg.Operations.project_rel_path` but not assigned a value. │ Stacktrace: │ [1] get_test_dir(ctx::Pkg.Types.Context, pkgspec::PackageSpec) │ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:75 │ [2] test_dir_has_project_file │ @ ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:52 [inlined] │ [3] maybe_gen_project_override! │ @ ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:83 [inlined] │ [4] activate(pkg::String; allow_reresolve::Bool) │ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:12 │ [5] activate(pkg::String) │ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:9 │ [6] top-level scope │ @ /PkgEval.jl/scripts/precompile.jl:24 │ [7] include(mod::Module, _path::String) │ @ Base ./Base.jl:309 │ [8] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:344 │ [9] _start() │ @ Base ./client.jl:577 └ @ Main /PkgEval.jl/scripts/precompile.jl:26 Precompiling package dependencies... Precompiling packages... 19887.4 ms ✓ Lerche 86787.7 ms ✓ DataFrames 46822.7 ms ✓ CrystalInfoFramework 12636.9 ms ✓ CrystalInfoContainers 4 dependencies successfully precompiled in 168 seconds. 38 already precompiled. 2 dependencies had output during precompilation: ┌ CrystalInfoContainers │ WARNING: Constructor for type "DDLm_Dictionary" was extended in `CrystalInfoContainers` without explicit qualification or import. │ NOTE: Assumed "DDLm_Dictionary" refers to `CrystalInfoFramework.DDLm_Dictionary`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function DDLm_Dictionary end`. │ Hint: To silence the warning, qualify `DDLm_Dictionary` as `CrystalInfoFramework.DDLm_Dictionary` in the method signature or explicitly `import CrystalInfoFramework: DDLm_Dictionary`. │ WARNING: Constructor for type "DDL2_Dictionary" was extended in `CrystalInfoContainers` without explicit qualification or import. │ NOTE: Assumed "DDL2_Dictionary" refers to `CrystalInfoFramework.DDL2_Dictionary`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function DDL2_Dictionary end`. │ Hint: To silence the warning, qualify `DDL2_Dictionary` as `CrystalInfoFramework.DDL2_Dictionary` in the method signature or explicitly `import CrystalInfoFramework: DDL2_Dictionary`. └ ┌ Lerche │ WARNING: Constructor for type "String" was extended in `Lerche` without explicit qualification or import. │ NOTE: Assumed "String" refers to `Base.String`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function String end`. │ Hint: To silence the warning, qualify `String` as `Base.String` in the method signature or explicitly `import Base: String`. └ Precompilation completed after 179.09s ################################################################################ # Testing # Testing CrystalInfoContainers Status `/tmp/jl_7k4Ou1/Project.toml` [0536147b] CrystalInfoContainers v0.1.1 ⌅ [6007d9b0] CrystalInfoFramework v1.1.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_7k4Ou1/Manifest.toml` [34da2185] Compat v4.18.1 [a8cc5b0e] Crayons v4.1.1 [0536147b] CrystalInfoContainers v0.1.1 ⌅ [6007d9b0] CrystalInfoFramework v1.1.0 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [842dd82b] InlineStrings v1.4.5 [41ab1584] InvertedIndices v1.3.1 [82899510] IteratorInterfaceExtensions v1.0.0 [b964fa9f] LaTeXStrings v1.4.0 [d42ef402] Lerche v0.5.7 [1914dd2f] MacroTools v0.5.16 [e1d29d7a] Missings v1.2.0 [bac558e1] OrderedCollections v1.8.1 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 [08abe8d2] PrettyTables v3.1.0 [189a3867] Reexport v1.2.2 [91c51154] SentinelArrays v1.4.8 [a2af1166] SortingAlgorithms v1.2.2 [10745b16] Statistics v1.11.1 [892a3eda] StringManipulation v0.4.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [5c2747f8] URIs v1.6.1 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [4536629a] OpenBLAS_jll v0.3.29+0 [8e850b90] libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Test Summary: | Pass Total Time Test simple dict as DataSource | 6 6 7.1s Test 1: q is C Test 3: ["O", "C", "H"] Test Summary: | Pass Total Time Test CIF block as DataSource | 4 4 10.9s cif_img.dic _diffrn_detector_axis.detector_id Testing definition _diffrn_scan_axis.angle_start float _diffrn_scan_axis.angle_start Block(Pair{String, Vector}("_item.category_id", ["diffrn_scan_axis"]), Pair{String, Vector}("_item_default.value", ["0.0"]), Pair{String, Vector}("_item.name", ["_diffrn_scan_axis.angle_start"]), Pair{String, Vector}("_item_units.code", ["degrees"]), Pair{String, Vector}("_item.mandatory_code", ["no"]), Pair{String, Vector}("_item_type.code", ["float"]), Pair{String, Vector}("_item_description.description", [" The starting position for the specified axis in degrees."])) Test Summary: | Pass Total Time Test multi data block as DataSource | 4 4 7.5s Getting all linked values for _atom_site.fract_x -> _atom_site.label) Getting all linked values for _atom_site.fract_x -> _atom_site.label) Test Summary: | Pass Total Time Test TypedDataSources | 9 9 59.3s ┌ Warning: Must create key data name for cell └ @ CrystalInfoContainers ~/.julia/packages/CrystalInfoContainers/1uydM/src/Relations.jl:272 ┌ Warning: Must create key data name for cell └ @ CrystalInfoContainers ~/.julia/packages/CrystalInfoContainers/1uydM/src/Relations.jl:272 Test Summary: | Pass Total Time Test construction of RelationalContainers from Datasources and dictionaries | 7 7 15.9s Test Summary: | Pass Total Time Test construction of a CifCategory | 5 5 9.7s Test Summary: | Pass Total Time Test child categories | 1 1 6.5s Test Summary: | Pass Total Time Test behaviour of plain CatPackets | 11 11 6.0s ┌ Warning: Must create key data name for atom_site └ @ CrystalInfoContainers ~/.julia/packages/CrystalInfoContainers/1uydM/src/Relations.jl:272 Test Summary: | Pass Total Time Test namespace operations | 9 9 11.7s Testing CrystalInfoContainers tests passed Testing completed after 151.93s PkgEval succeeded after 360.04s