Package evaluation to test BoundaryLayerDynamics on Julia 1.14.0-DEV.30 (073666df8b*) started at 2025-11-04T19:03:11.169 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.92s ################################################################################ # Installation # Installing BoundaryLayerDynamics... Resolving package versions... Installed HDF5 ─ v0.16.16 Updating `~/.julia/environments/v1.14/Project.toml` [9d12ad70] + BoundaryLayerDynamics v1.0.0 Updating `~/.julia/environments/v1.14/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 ⌅ [79e6a3ab] + Adapt v3.7.2 ⌃ [4fba245c] + ArrayInterface v7.7.1 [9d12ad70] + BoundaryLayerDynamics v1.0.0 [34da2185] + Compat v4.18.1 [9a962f9c] + DataAPI v1.16.0 [e2d170a0] + DataValueInterfaces v1.0.0 [ffbed154] + DocStringExtensions v0.9.5 [e2ba6199] + ExprTools v0.1.10 [7a1cc6ca] + FFTW v1.10.0 ⌅ [46192b85] + GPUArraysCore v0.1.5 ⌅ [f67ccb44] + HDF5 v0.16.16 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 ⌅ [682c06a0] + JSON v0.21.4 [da04e1cc] + MPI v0.20.23 [3da0fdf6] + MPIPreferences v0.1.11 [bac558e1] + OrderedCollections v1.8.1 [69de0a69] + Parsers v2.8.3 [eebad327] + PkgVersion v0.3.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [3cdcf5f2] + RecipesBase v1.3.4 ⌅ [731186ca] + RecursiveArrayTools v2.38.10 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 ⌅ [2efcf032] + SymbolicIndexingInterface v0.2.2 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [a759f4b9] + TimerOutputs v0.5.29 [f5851436] + FFTW_jll v3.3.11+0 [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.2+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [856f044c] + MKL_jll v2025.2.0+0 [7cb0a576] + MPICH_jll v4.3.2+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.8+0 ⌅ [02c8fc9c] + XML2_jll v2.13.9+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0 [477f73a3] + libaec_jll v1.1.4+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.16.0+0 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.9.9 [4536629a] + OpenBLAS_jll v0.3.29+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.67.1+0 [3f19e933] + p7zip_jll v17.6.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Building HDF5 → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/114e20044677badbc631ee6fdc80a67920561a29/build.log` Installation completed after 15.79s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Error: Failed to use TestEnv.jl; test dependencies will not be precompiled │ exception = │ UndefVarError: `project_rel_path` not defined in `TestEnv` │ Suggestion: this global was defined as `Pkg.Operations.project_rel_path` but not assigned a value. │ Stacktrace: │ [1] get_test_dir(ctx::Pkg.Types.Context, pkgspec::PackageSpec) │ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:75 │ [2] test_dir_has_project_file │ @ ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:52 [inlined] │ [3] maybe_gen_project_override! │ @ ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:83 [inlined] │ [4] activate(pkg::String; allow_reresolve::Bool) │ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:12 │ [5] activate(pkg::String) │ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:9 │ [6] top-level scope │ @ /PkgEval.jl/scripts/precompile.jl:24 │ [7] include(mod::Module, _path::String) │ @ Base ./Base.jl:309 │ [8] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:344 │ [9] _start() │ @ Base ./client.jl:577 └ @ Main /PkgEval.jl/scripts/precompile.jl:26 Precompiling package dependencies... Precompiling packages... 11109.5 ms ✓ MPI 14431.3 ms ✓ HDF5 2 dependencies successfully precompiled in 28 seconds. 81 already precompiled. Precompilation completed after 42.58s ################################################################################ # Testing # Testing BoundaryLayerDynamics Status `/tmp/jl_baqDlx/Project.toml` [9d12ad70] BoundaryLayerDynamics v1.0.0 ⌅ [f67ccb44] HDF5 v0.16.16 [da04e1cc] MPI v0.20.23 [a759f4b9] TimerOutputs v0.5.29 [37e2e46d] LinearAlgebra v1.13.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_baqDlx/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 ⌅ [79e6a3ab] Adapt v3.7.2 ⌃ [4fba245c] ArrayInterface v7.7.1 [9d12ad70] BoundaryLayerDynamics v1.0.0 [34da2185] Compat v4.18.1 [9a962f9c] DataAPI v1.16.0 [e2d170a0] DataValueInterfaces v1.0.0 [ffbed154] DocStringExtensions v0.9.5 [e2ba6199] ExprTools v0.1.10 [7a1cc6ca] FFTW v1.10.0 ⌅ [46192b85] GPUArraysCore v0.1.5 ⌅ [f67ccb44] HDF5 v0.16.16 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 ⌅ [682c06a0] JSON v0.21.4 [da04e1cc] MPI v0.20.23 [3da0fdf6] MPIPreferences v0.1.11 [bac558e1] OrderedCollections v1.8.1 [69de0a69] Parsers v2.8.3 [eebad327] PkgVersion v0.3.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 [3cdcf5f2] RecipesBase v1.3.4 ⌅ [731186ca] RecursiveArrayTools v2.38.10 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [1e83bf80] StaticArraysCore v1.4.4 [10745b16] Statistics v1.11.1 ⌅ [2efcf032] SymbolicIndexingInterface v0.2.2 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [a759f4b9] TimerOutputs v0.5.29 [f5851436] FFTW_jll v3.3.11+0 [0234f1f7] HDF5_jll v1.14.6+0 [e33a78d0] Hwloc_jll v2.12.2+0 [1d5cc7b8] IntelOpenMP_jll v2025.2.0+0 [94ce4f54] Libiconv_jll v1.18.0+0 [856f044c] MKL_jll v2025.2.0+0 [7cb0a576] MPICH_jll v4.3.2+0 [f1f71cc9] MPItrampoline_jll v5.5.4+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [fe0851c0] OpenMPI_jll v5.0.8+0 ⌅ [02c8fc9c] XML2_jll v2.13.9+0 [a65dc6b1] Xorg_libpciaccess_jll v0.18.1+0 [477f73a3] libaec_jll v1.1.4+0 [1317d2d5] oneTBB_jll v2022.0.0+1 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.16.0+0 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.9.9 [4536629a] OpenBLAS_jll v0.3.29+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.67.1+0 [3f19e933] p7zip_jll v17.6.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Testing BoundaryLayerDynamics.jl... (single process) Test Summary: | Pass Total Time Atmospheric Boundary Layer Simulations | 290 290 13m43.5s ─────────────────────────────────────────────────────────────────────────────────────────────── Time Allocations ─────────────────────── ──────────────────────── Tot / % measured: 837s / 98.4% 28.1GiB / 99.4% Section ncalls time %tot avg alloc %tot avg ─────────────────────────────────────────────────────────────────────────────────────────────── BoundaryLayerDynamics.jl Tests 1 824s 100.0% 824s 27.9GiB 100.0% 27.9GiB Advection 1 273s 33.2% 273s 4.84GiB 17.3% 4.84GiB Nonlinear Processes 28 185s 22.5% 6.61s 367MiB 1.3% 13.1MiB Resolved Advection 28 184s 22.3% 6.57s 343MiB 1.2% 12.3MiB Linear Processes 28 501μs 0.0% 17.9μs 17.1KiB 0.0% 624B Laminar Flows 1 127s 15.4% 127s 6.00GiB 21.5% 6.00GiB ABL Simulation 1 104s 12.7% 104s 5.33GiB 19.1% 5.33GiB LES 1 104s 12.6% 104s 2.67GiB 9.6% 2.67GiB Nonlinear Processes 2 37.8s 4.6% 18.9s 761MiB 2.7% 381MiB Static Smagorinsky SGS Model 2 29.1s 3.5% 14.5s 510MiB 1.8% 255MiB Linear Processes 2 48.3ms 0.0% 24.1ms 187KiB 0.0% 93.5KiB Pressure 1 55.2s 6.7% 55.2s 3.25GiB 11.7% 3.25GiB Projections 11 154ms 0.0% 14.0ms 3.21MiB 0.0% 298KiB Pressure Solver 11 154ms 0.0% 14.0ms 3.20MiB 0.0% 298KiB Logging 1 47.9s 5.8% 47.9s 1.43GiB 5.1% 1.43GiB ODE 1 33.4s 4.1% 33.4s 1.14GiB 4.1% 1.14GiB Transforms 1 28.7s 3.5% 28.7s 648MiB 2.3% 648MiB Output 1 25.6s 3.1% 25.6s 1.53GiB 5.5% 1.53GiB Diffusion 1 12.0s 1.5% 12.0s 577MiB 2.0% 577MiB Linear Processes 1 1.19s 0.1% 1.19s 11.1MiB 0.0% 11.1MiB Molecular Diffusion 3 1.19s 0.1% 398ms 11.0MiB 0.0% 3.68MiB Nonlinear Processes 1 181ms 0.0% 181ms 1.64MiB 0.0% 1.64MiB Derivatives 1 8.27s 1.0% 8.27s 393MiB 1.4% 393MiB Nonlinear Processes 1 2.11s 0.3% 2.11s 56.0MiB 0.2% 56.0MiB VorticityTest 1 1.60s 0.2% 1.60s 48.6MiB 0.2% 48.6MiB Linear Processes 1 13.4ms 0.0% 13.4ms 70.2KiB 0.0% 70.2KiB Grid 1 2.81s 0.3% 2.81s 52.9MiB 0.2% 52.9MiB ─────────────────────────────────────────────────────────────────────────────────────────────── Fatal error in internal_Init_thread: Other MPI error, error stack: internal_Init_thread(71)...........: MPI_Init_thread(argc=(nil), argv=(nil), required=2, provided=0x7ffd3e0b4590) failed MPII_Init_thread(257)..............: MPID_Init(65)......................: init_world(169)....................: channel initialization failed MPIDI_CH3_Init(84).................: MPID_nem_init(314).................: MPID_nem_tcp_init(175).............: MPID_nem_tcp_get_business_card(400): GetSockInterfaceAddr(373)..........: gethostbyname failed, BoundaryLayerDynamics-primary-KLI7XZkY (errno 1) Error During MPI Tests (n=4) at /home/pkgeval/.julia/packages/BoundaryLayerDynamics/x9Zng/test/runtests.jl:47 Stacktrace: [1] top-level scope @ ~/.julia/packages/BoundaryLayerDynamics/x9Zng/test/runtests.jl:47 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [3] top-level scope @ none:6 [4] eval(m::Module, e::Any) @ Core ./boot.jl:489 [5] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [6] _start() @ Base ./client.jl:577 Testing failed after 860.74s ERROR: LoadError: Package BoundaryLayerDynamics errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2946 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2795 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:572 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:548 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [12] include(mod::Module, _path::String) @ Base ./Base.jl:309 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 1038.34s: package tests unexpectedly errored