Package evaluation to test MRIFieldmaps on Julia 1.14.0-DEV.24 (d5fb6bbb43*) started at 2025-11-02T15:51:02.401 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.66s ################################################################################ # Installation # Installing MRIFieldmaps... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [5af58b90] + MRIFieldmaps v0.0.4 Updating `~/.julia/environments/v1.14/Manifest.toml` [14f7f29c] + AMD v0.5.3 [66dad0bd] + AliasTables v1.1.3 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.1 [ffbed154] + DocStringExtensions v0.9.5 [1a297f60] + FillArrays v1.14.0 [9ee76f2b] + ImageGeoms v0.11.1 [92d709cd] + IrrationalConstants v0.2.6 [7031d0ef] + LazyGrids v1.1.0 [f5a24dde] + LimitedLDLFactorizations v0.5.2 [2ab3a3ac] + LogExpFunctions v0.3.29 [5af58b90] + MRIFieldmaps v0.0.4 [e1d29d7a] + Missings v1.2.0 [bac558e1] + OrderedCollections v1.8.1 [43287f4e] + PtrArrays v1.3.0 [a2af1166] + SortingAlgorithms v1.2.2 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.7 [56f22d72] + Artifacts v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.13.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.15.0+0 Installation completed after 3.91s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Error: Failed to use TestEnv.jl; test dependencies will not be precompiled │ exception = │ UndefVarError: `project_rel_path` not defined in `TestEnv` │ Suggestion: this global was defined as `Pkg.Operations.project_rel_path` but not assigned a value. │ Stacktrace: │ [1] get_test_dir(ctx::Pkg.Types.Context, pkgspec::PackageSpec) │ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:75 │ [2] test_dir_has_project_file │ @ ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:52 [inlined] │ [3] maybe_gen_project_override! │ @ ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:83 [inlined] │ [4] activate(pkg::String; allow_reresolve::Bool) │ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:12 │ [5] activate(pkg::String) │ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:9 │ [6] top-level scope │ @ /PkgEval.jl/scripts/precompile.jl:24 │ [7] include(mod::Module, _path::String) │ @ Base ./Base.jl:309 │ [8] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:344 │ [9] _start() │ @ Base ./client.jl:577 └ @ Main /PkgEval.jl/scripts/precompile.jl:26 Precompiling package dependencies... Precompiling packages... 905.6 ms ✓ LazyGrids 4605.1 ms ✓ StatsBase 1124.2 ms ✓ ImageGeoms 2590.9 ms ✓ MRIFieldmaps 4 dependencies successfully precompiled in 10 seconds. 23 already precompiled. Precompilation completed after 21.66s ################################################################################ # Testing # Testing MRIFieldmaps Status `/tmp/jl_gyFTJg/Project.toml` [9ee76f2b] ImageGeoms v0.11.1 [5af58b90] MRIFieldmaps v0.0.4 [1986cc42] Unitful v1.25.1 [37e2e46d] LinearAlgebra v1.13.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_gyFTJg/Manifest.toml` [14f7f29c] AMD v0.5.3 [66dad0bd] AliasTables v1.1.3 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.19.1 [ffbed154] DocStringExtensions v0.9.5 [1a297f60] FillArrays v1.14.0 [9ee76f2b] ImageGeoms v0.11.1 [92d709cd] IrrationalConstants v0.2.6 [7031d0ef] LazyGrids v1.1.0 [f5a24dde] LimitedLDLFactorizations v0.5.2 [2ab3a3ac] LogExpFunctions v0.3.29 [5af58b90] MRIFieldmaps v0.0.4 [e1d29d7a] Missings v1.2.0 [bac558e1] OrderedCollections v1.8.1 [43287f4e] PtrArrays v1.3.0 [a2af1166] SortingAlgorithms v1.2.2 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.7 [1986cc42] Unitful v1.25.1 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [8dfed614] Test v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [4536629a] OpenBLAS_jll v0.3.29+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [8e850b90] libblastrampoline_jll v5.15.0+0 Testing Running tests... Test Summary: | Pass Total Time MRIFieldmaps | 1 1 1.2s Test Summary: | Pass Total Time spdiff1 | 6 6 5.2s Test Summary: | Pass Total Time spdiff2 | 9 9 0.5s Test Summary: | Pass Total Time b0init | 9 9 59.9s Test Summary: | Pass Total Time b0init-wf | 2 2 10.1s Test Summary: | Total Time div0 | 0 0.1s Test Summary: | Pass Total Time b0scale | 6 6 6.9s Test Summary: | Pass Total Time combine | 4 4 0.0s ┌ Warning: wrong direction so resetting └ @ MRIFieldmaps ~/.julia/packages/MRIFieldmaps/l9kXm/src/b0map.jl:17 ┌ Warning: =1, |ddir|=1.0, |grad|=1.0 └ @ MRIFieldmaps ~/.julia/packages/MRIFieldmaps/l9kXm/src/b0map.jl:18 [ Info: 1 of 5 [ Info: RESETTING GAMMA, iter=2 [ Info: 1 of 5 [ Info: RESETTING GAMMA, iter=2 [ Info: 1 of 5 [ Info: 1 of 5 [ Info: 1 of 5 [ Info: RESETTING GAMMA, iter=2 [ Info: 1 of 5 [ Info: RESETTING GAMMA, iter=2 [ Info: ite_solve: NCG-MLS with precon bad [ Info: 1 of 5 [ Info: 1 of 5 [ Info: RESETTING GAMMA, iter=2 [ Info: ite_solve: NCG-MLS with precon ichol [ Info: 1 of 30 [ Info: 1 of 5 [ Info: 1 of 9 [ Info: RESETTING GAMMA, iter=6 [ Info: RESETTING GAMMA, iter=8 Test Summary: | Pass Total Time b0map | 12 12 1m20.1s snr = 20 * log(norm(ytrue) / norm(ydata - ytrue)) = 40.105446f0 [ Info: ite_solve: NCG-MLS with precon diag [ Info: iter 0, cost 1.380583484375e6 [ Info: 1 of 8 [ Info: iter 1, cost 1.19570098046875e6 [ Info: iter 2, cost 1.158116408203125e6 [ Info: iter 3, cost 1.147417248046875e6 [ Info: iter 4, cost 1.1416318408203125e6 [ Info: iter 5, cost 1.1390289799804688e6 [ Info: iter 6, cost 1.1376653427734375e6 [ Info: iter 7, cost 1.1370860859375e6 Test Summary: | Pass Total Time b0map-wf | 6 6 39.2s [ Info: ite_solve: NCG-MLS with precon diag [ Info: 1 of 30 [ Info: RESETTING GAMMA, iter=2 [ Info: 11 of 30 ┌ Warning: wrong direction so resetting └ @ MRIFieldmaps ~/.julia/packages/MRIFieldmaps/l9kXm/src/b0map.jl:17 ┌ Warning: =1.1677781971201292e-31, |ddir|=7.663602339509555e-15 ms^-1, |grad|=3.104084305484187e-16 ms └ @ MRIFieldmaps ~/.julia/packages/MRIFieldmaps/l9kXm/src/b0map.jl:18 [ Info: RESETTING GAMMA, iter=18 [ Info: RESETTING GAMMA, iter=19 [ Info: RESETTING GAMMA, iter=20 [ Info: RESETTING GAMMA, iter=21 [ Info: 21 of 30 [ Info: RESETTING GAMMA, iter=22 [ Info: RESETTING GAMMA, iter=23 [ Info: RESETTING GAMMA, iter=24 [ Info: RESETTING GAMMA, iter=25 [ Info: RESETTING GAMMA, iter=26 [ Info: RESETTING GAMMA, iter=27 [ Info: RESETTING GAMMA, iter=28 [ Info: RESETTING GAMMA, iter=29 [ Info: RESETTING GAMMA, iter=30 Test Summary: | Pass Total Time phasecontrast | 2 2 52.2s Testing MRIFieldmaps tests passed Testing completed after 277.4s PkgEval succeeded after 349.51s