Package evaluation to test GPLikelihoods on Julia 1.14.0-DEV.14 (ec5cf08762*) started at 2025-11-02T17:01:34.739


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 10.35s


################################################################################
# Installation
#

Installing GPLikelihoods...
   Resolving package versions...
   Installed Rmath_jll ─────────────── v0.5.1+0
   Installed HypergeometricFunctions ─ v0.3.28
   Installed OrderedCollections ────── v1.8.1
   Installed AliasTables ───────────── v1.1.3
   Installed FillArrays ────────────── v1.14.0
   Installed DataStructures ────────── v0.19.1
   Installed StatsBase ─────────────── v0.34.7
   Installed Functors ──────────────── v0.4.12
   Installed Compat ────────────────── v4.18.1
   Installed DataAPI ───────────────── v1.16.0
   Installed StatsAPI ──────────────── v1.7.1
   Installed Statistics ────────────── v1.11.1
   Installed StaticArrays ──────────── v1.9.15
   Installed StaticArraysCore ──────── v1.4.4
   Installed GPLikelihoods ─────────── v0.4.7
   Installed PrecompileTools ───────── v1.3.3
   Installed FastGaussQuadrature ───── v0.5.1
   Installed IrrationalConstants ───── v0.2.6
   Installed QuadGK ────────────────── v2.11.2
   Installed ChainRulesCore ────────── v1.26.0
   Installed OpenSpecFun_jll ───────── v0.5.6+0
   Installed Rmath ─────────────────── v0.9.0
   Installed StatsFuns ─────────────── v1.5.2
   Installed LogExpFunctions ───────── v0.3.29
   Installed PtrArrays ─────────────── v1.3.0
   Installed InverseFunctions ──────── v0.1.17
   Installed SpecialFunctions ──────── v2.6.1
   Installed Reexport ──────────────── v1.2.2
   Installed Distributions ─────────── v0.25.122
   Installed Missings ──────────────── v1.2.0
   Installed Preferences ───────────── v1.5.0
   Installed JLLWrappers ───────────── v1.7.1
   Installed PDMats ────────────────── v0.11.36
   Installed DocStringExtensions ───── v0.9.5
   Installed SortingAlgorithms ─────── v1.2.2
  Installing 2 artifacts
   Installed artifact Rmath       121.9 KiB
   Installed artifact OpenSpecFun 194.9 KiB
    Updating `~/.julia/environments/v1.14/Project.toml`
  [6031954c] + GPLikelihoods v0.4.7
    Updating `~/.julia/environments/v1.14/Manifest.toml`
  [66dad0bd] + AliasTables v1.1.3
  [d360d2e6] + ChainRulesCore v1.26.0
  [34da2185] + Compat v4.18.1
  [9a962f9c] + DataAPI v1.16.0
  [864edb3b] + DataStructures v0.19.1
  [31c24e10] + Distributions v0.25.122
  [ffbed154] + DocStringExtensions v0.9.5
⌅ [442a2c76] + FastGaussQuadrature v0.5.1
  [1a297f60] + FillArrays v1.14.0
⌅ [d9f16b24] + Functors v0.4.12
  [6031954c] + GPLikelihoods v0.4.7
  [34004b35] + HypergeometricFunctions v0.3.28
  [3587e190] + InverseFunctions v0.1.17
  [92d709cd] + IrrationalConstants v0.2.6
  [692b3bcd] + JLLWrappers v1.7.1
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [e1d29d7a] + Missings v1.2.0
  [bac558e1] + OrderedCollections v1.8.1
  [90014a1f] + PDMats v0.11.36
  [aea7be01] + PrecompileTools v1.3.3
  [21216c6a] + Preferences v1.5.0
  [43287f4e] + PtrArrays v1.3.0
  [1fd47b50] + QuadGK v2.11.2
  [189a3867] + Reexport v1.2.2
  [79098fc4] + Rmath v0.9.0
  [a2af1166] + SortingAlgorithms v1.2.2
  [276daf66] + SpecialFunctions v2.6.1
  [90137ffa] + StaticArrays v1.9.15
  [1e83bf80] + StaticArraysCore v1.4.4
  [10745b16] + Statistics v1.11.1
  [82ae8749] + StatsAPI v1.7.1
  [2913bbd2] + StatsBase v0.34.7
  [4c63d2b9] + StatsFuns v1.5.2
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
  [f50d1b31] + Rmath_jll v0.5.1+0
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.13.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v1.0.0
  [9e88b42a] + Serialization v1.11.0
  [2f01184e] + SparseArrays v1.13.0
  [f489334b] + StyledStrings v1.11.0
  [4607b0f0] + SuiteSparse
  [fa267f1f] + TOML v1.0.3
  [8dfed614] + Test v1.11.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [05823500] + OpenLibm_jll v0.8.7+0
  [bea87d4a] + SuiteSparse_jll v7.10.1+0
  [8e850b90] + libblastrampoline_jll v5.15.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 7.91s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...
Precompiling packages...
   4337.8 ms  ✓ TestEnv
  1 dependency successfully precompiled in 4 seconds. 27 already precompiled.
  1 dependency had output during precompilation:
┌ TestEnv
│  WARNING: Imported binding Operations.project_rel_path was undeclared at import time during import to TestEnv.
└  

┌ Error: Failed to use TestEnv.jl; test dependencies will not be precompiled
│   exception =
│    UndefVarError: `project_rel_path` not defined in `TestEnv`
│    Suggestion: this global was defined as `Pkg.Operations.project_rel_path` but not assigned a value.
│    Stacktrace:
│     [1] get_test_dir(ctx::Pkg.Types.Context, pkgspec::PackageSpec)
│       @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:75
│     [2] test_dir_has_project_file
│       @ ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:52 [inlined]
│     [3] maybe_gen_project_override!
│       @ ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:83 [inlined]
│     [4] activate(pkg::String; allow_reresolve::Bool)
│       @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:12
│     [5] activate(pkg::String)
│       @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:9
│     [6] top-level scope
│       @ /PkgEval.jl/scripts/precompile.jl:24
│     [7] include(mod::Module, _path::String)
│       @ Base ./Base.jl:309
│     [8] exec_options(opts::Base.JLOptions)
│       @ Base ./client.jl:344
│     [9] _start()
│       @ Base ./client.jl:577
└ @ Main /PkgEval.jl/scripts/precompile.jl:26
Precompiling package dependencies...
Precompiling packages...
    759.2 ms  ✓ Reexport
   1084.5 ms  ✓ Statistics
    812.0 ms  ✓ DataAPI
   1939.4 ms  ✓ IrrationalConstants
    868.8 ms  ✓ StaticArraysCore
    829.1 ms  ✓ StatsAPI
   1215.9 ms  ✓ OrderedCollections
    890.9 ms  ✓ InverseFunctions
   1090.5 ms  ✓ DocStringExtensions
   1378.6 ms  ✓ Functors
   2037.0 ms  ✓ FillArrays
    793.2 ms  ✓ PtrArrays
   1211.7 ms  ✓ SuiteSparse
   1132.3 ms  ✓ Compat
   1105.1 ms  ✓ Preferences
   1467.1 ms  ✓ Statistics → SparseArraysExt
    931.7 ms  ✓ Missings
   3432.6 ms  ✓ DataStructures
   1622.1 ms  ✓ InverseFunctions → InverseFunctionsTestExt
    820.2 ms  ✓ InverseFunctions → InverseFunctionsDatesExt
   1384.1 ms  ✓ LogExpFunctions
   1518.1 ms  ✓ FillArrays → FillArraysSparseArraysExt
    923.6 ms  ✓ FillArrays → FillArraysStatisticsExt
    952.0 ms  ✓ AliasTables
   1824.6 ms  ✓ PDMats
    797.5 ms  ✓ Compat → CompatLinearAlgebraExt
   1179.0 ms  ✓ JLLWrappers
    897.5 ms  ✓ PrecompileTools
   1034.3 ms  ✓ SortingAlgorithms
   2258.1 ms  ✓ QuadGK
    796.0 ms  ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt
   1432.4 ms  ✓ FillArrays → FillArraysPDMatsExt
   2616.5 ms  ✓ ChainRulesCore
   1371.8 ms  ✓ Rmath_jll
   1418.2 ms  ✓ OpenSpecFun_jll
  12918.0 ms  ✓ StaticArrays
   4263.0 ms  ✓ StatsBase
   1312.7 ms  ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt
   2945.7 ms  ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt
   1438.8 ms  ✓ Rmath
   5006.0 ms  ✓ SpecialFunctions
   1323.9 ms  ✓ StaticArrays → StaticArraysStatisticsExt
   1395.6 ms  ✓ StaticArrays → StaticArraysChainRulesCoreExt
   1334.5 ms  ✓ PDMats → StatsBaseExt
   4431.2 ms  ✓ FastGaussQuadrature
   3660.3 ms  ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt
   2305.2 ms  ✓ HypergeometricFunctions
   2749.7 ms  ✓ StatsFuns
    953.6 ms  ✓ StatsFuns → StatsFunsInverseFunctionsExt
   3267.4 ms  ✓ StatsFuns → StatsFunsChainRulesCoreExt
   8579.1 ms  ✓ Distributions
   2842.6 ms  ✓ Distributions → DistributionsChainRulesCoreExt
   3392.6 ms  ✓ Distributions → DistributionsTestExt
   4817.3 ms  ✓ GPLikelihoods
  54 dependencies successfully precompiled in 115 seconds. 16 already precompiled.

Precompilation completed after 131.46s


################################################################################
# Testing
#

     Testing GPLikelihoods
      Status `/tmp/jl_vCUs9d/Project.toml`
  [4c88cf16] Aqua v0.8.14
  [31c24e10] Distributions v0.25.122
⌅ [d9f16b24] Functors v0.4.12
  [6031954c] GPLikelihoods v0.4.7
  [4c63d2b9] StatsFuns v1.5.2
⌅ [e88e6eb3] Zygote v0.6.77
  [9a3f8284] Random v1.11.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_vCUs9d/Manifest.toml`
  [621f4979] AbstractFFTs v1.5.0
  [79e6a3ab] Adapt v4.4.0
  [66dad0bd] AliasTables v1.1.3
  [4c88cf16] Aqua v0.8.14
  [a9b6321e] Atomix v1.1.2
  [fa961155] CEnum v0.5.0
  [082447d4] ChainRules v1.72.6
  [d360d2e6] ChainRulesCore v1.26.0
  [bbf7d656] CommonSubexpressions v0.3.1
  [34da2185] Compat v4.18.1
  [187b0558] ConstructionBase v1.6.0
  [9a962f9c] DataAPI v1.16.0
  [864edb3b] DataStructures v0.19.1
  [e2d170a0] DataValueInterfaces v1.0.0
  [163ba53b] DiffResults v1.1.0
  [b552c78f] DiffRules v1.15.1
  [31c24e10] Distributions v0.25.122
  [ffbed154] DocStringExtensions v0.9.5
⌅ [442a2c76] FastGaussQuadrature v0.5.1
  [1a297f60] FillArrays v1.14.0
  [f6369f11] ForwardDiff v1.2.2
⌅ [d9f16b24] Functors v0.4.12
  [6031954c] GPLikelihoods v0.4.7
  [0c68f7d7] GPUArrays v11.2.6
  [46192b85] GPUArraysCore v0.2.0
  [076d061b] HashArrayMappedTries v0.2.0
  [34004b35] HypergeometricFunctions v0.3.28
  [7869d1d1] IRTools v0.4.15
  [3587e190] InverseFunctions v0.1.17
  [92d709cd] IrrationalConstants v0.2.6
  [82899510] IteratorInterfaceExtensions v1.0.0
  [692b3bcd] JLLWrappers v1.7.1
  [63c18a36] KernelAbstractions v0.9.38
  [929cbde3] LLVM v9.4.4
  [2ab3a3ac] LogExpFunctions v0.3.29
  [1914dd2f] MacroTools v0.5.16
  [e1d29d7a] Missings v1.2.0
  [77ba4419] NaNMath v1.1.3
  [bac558e1] OrderedCollections v1.8.1
  [90014a1f] PDMats v0.11.36
  [aea7be01] PrecompileTools v1.3.3
  [21216c6a] Preferences v1.5.0
  [43287f4e] PtrArrays v1.3.0
  [1fd47b50] QuadGK v2.11.2
  [c1ae055f] RealDot v0.1.0
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.1
  [79098fc4] Rmath v0.9.0
  [7e506255] ScopedValues v1.5.0
  [a2af1166] SortingAlgorithms v1.2.2
  [dc90abb0] SparseInverseSubset v0.1.2
  [276daf66] SpecialFunctions v2.6.1
  [90137ffa] StaticArrays v1.9.15
  [1e83bf80] StaticArraysCore v1.4.4
  [10745b16] Statistics v1.11.1
  [82ae8749] StatsAPI v1.7.1
  [2913bbd2] StatsBase v0.34.7
  [4c63d2b9] StatsFuns v1.5.2
  [09ab397b] StructArrays v0.7.2
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.12.1
  [013be700] UnsafeAtomics v0.3.0
⌅ [e88e6eb3] Zygote v0.6.77
  [700de1a5] ZygoteRules v0.2.7
  [dad2f222] LLVMExtra_jll v0.0.38+0
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
  [f50d1b31] Rmath_jll v0.5.1+0
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [8ba89e20] Distributed v1.11.0
  [f43a241f] Downloads v1.7.0
  [7b1f6079] FileWatching v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0
  [4af54fe1] LazyArtifacts v1.11.0
  [b27032c2] LibCURL v1.0.0
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.13.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [ca575930] NetworkOptions v1.3.0
  [44cfe95a] Pkg v1.13.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v1.0.0
  [9e88b42a] Serialization v1.11.0
  [6462fe0b] Sockets v1.11.0
  [2f01184e] SparseArrays v1.13.0
  [f489334b] StyledStrings v1.11.0
  [4607b0f0] SuiteSparse
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] LibCURL_jll v8.16.0+0
  [e37daf67] LibGit2_jll v1.9.1+0
  [29816b5a] LibSSH2_jll v1.11.3+1
  [14a3606d] MozillaCACerts_jll v2025.9.9
  [4536629a] OpenBLAS_jll v0.3.29+0
  [05823500] OpenLibm_jll v0.8.7+0
  [458c3c95] OpenSSL_jll v3.5.4+0
  [efcefdf7] PCRE2_jll v10.47.0+0
  [bea87d4a] SuiteSparse_jll v7.10.1+0
  [83775a58] Zlib_jll v1.3.1+2
  [3161d3a3] Zstd_jll v1.5.7+1
  [8e850b90] libblastrampoline_jll v5.15.0+0
  [8e850ede] nghttp2_jll v1.67.1+0
  [3f19e933] p7zip_jll v17.6.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
ERROR: LoadError: UndefVarError: `T` not defined in `ChainRules`
Suggestion: check for spelling errors or missing imports.
Stacktrace:
  [1] top-level scope
    @ ~/.julia/packages/ChainRules/14CDN/src/rulesets/LinearAlgebra/utils.jl:33
  [2] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:310
  [3] top-level scope
    @ ~/.julia/packages/ChainRules/14CDN/src/ChainRules.jl:53
  [4] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
  [5] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2817
  [6] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2576
  [7] macro expansion
    @ ./loading.jl:2504 [inlined]
  [8] macro expansion
    @ ./lock.jl:376 [inlined]
  [9] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2468
 [10] require
    @ ./loading.jl:2444 [inlined]
 [11] eval_import_path
    @ ./module.jl:36 [inlined]
 [12] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base ./module.jl:60
 [13] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr})
    @ Base ./module.jl:101
 [14] top-level scope
    @ ~/.julia/packages/Zygote/zowwZ/src/Zygote.jl:10
 [15] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [16] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2817
 [17] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2576
 [18] macro expansion
    @ ./loading.jl:2504 [inlined]
 [19] macro expansion
    @ ./lock.jl:376 [inlined]
 [20] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2468
 [21] require
    @ ./loading.jl:2444 [inlined]
 [22] eval_import_path
    @ ./module.jl:36 [inlined]
 [23] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base ./module.jl:60
 [24] _eval_using(to::Module, path::Expr)
    @ Base ./module.jl:137
 [25] top-level scope
    @ ~/.julia/packages/GPLikelihoods/wX4ie/test/runtests.jl:11
 [26] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:310
 [27] top-level scope
    @ none:6
 [28] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [29] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:310
 [30] _start()
    @ Base ./client.jl:577
in expression starting at /home/pkgeval/.julia/packages/ChainRules/14CDN/src/rulesets/LinearAlgebra/utils.jl:33
in expression starting at /home/pkgeval/.julia/packages/ChainRules/14CDN/src/ChainRules.jl:1
in expression starting at /home/pkgeval/.julia/packages/Zygote/zowwZ/src/Zygote.jl:1
in expression starting at /home/pkgeval/.julia/packages/GPLikelihoods/wX4ie/test/runtests.jl:11

Testing failed after 166.9s

ERROR: LoadError: Package GPLikelihoods errored during testing
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2936
  [3] test
    @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2785 [inlined]
  [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:572
  [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:548
  [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172
  [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161
  [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160
  [9] test
    @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined]
 [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String)
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159
 [11] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:219
 [12] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [13] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:344
 [14] _start()
    @ Base ./client.jl:577
in expression starting at /PkgEval.jl/scripts/evaluate.jl:210

PkgEval failed after 331.47s: package tests unexpectedly errored