Package evaluation to test CodonMolecularEvolution on Julia 1.14.0-DEV.14 (ec5cf08762*) started at 2025-11-02T23:47:12.445 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.32s ################################################################################ # Installation # Installing CodonMolecularEvolution... Resolving package versions... Installed DefineSingletons ──────────── v0.1.2 Installed MKL_jll ───────────────────── v2025.2.0+0 Installed ArgCheck ──────────────────── v2.5.0 Installed InlineStrings ─────────────── v1.4.5 Installed OrderedCollections ────────── v1.8.1 Installed SentinelArrays ────────────── v1.4.8 Installed QuadGK ────────────────────── v2.11.2 Installed InitialValues ─────────────── v0.3.1 Installed ScopedValues ──────────────── v1.5.0 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed Reexport ──────────────────── v1.2.2 Installed Tables ────────────────────── v1.12.1 Installed WoodburyMatrices ──────────── v1.0.0 Installed InverseFunctions ──────────── v0.1.17 Installed PackageExtensionCompat ────── v1.0.2 Installed Preferences ───────────────── v1.5.0 Installed Missings ──────────────────── v1.2.0 Installed RangeArrays ───────────────── v0.3.2 Installed Crayons ───────────────────── v4.1.1 Installed LaTeXStrings ──────────────── v1.4.0 Installed TableTraits ───────────────── v1.0.1 Installed MCMCChains ────────────────── v6.0.7 Installed SortingAlgorithms ─────────── v1.2.2 Installed oneTBB_jll ────────────────── v2022.0.0+1 Installed MacroTools ────────────────── v0.5.16 Installed FillArrays ────────────────── v1.14.0 Installed AbstractTrees ─────────────── v0.4.5 Installed NaturalSort ───────────────── v1.0.0 Installed DataStructures ────────────── v0.19.1 Installed CodecZlib ─────────────────── v0.7.8 Installed IntelOpenMP_jll ───────────── v2025.2.0+0 Installed ArrayInterface ────────────── v7.22.0 Installed ConsoleProgressMonitor ────── v0.1.2 Installed CEnum ─────────────────────── v0.5.0 Installed StatsBase ─────────────────── v0.34.7 Installed MolecularEvolution ────────── v0.2.7 Installed GPUArraysCore ─────────────── v0.2.0 Installed DataValueInterfaces ───────── v1.0.0 Installed IrrationalConstants ───────── v0.2.6 Installed MCMCDiagnosticTools ───────── v0.3.15 Installed LoggingExtras ─────────────── v1.2.0 Installed TerminalLoggers ───────────── v0.1.7 Installed KrylovKit ─────────────────── v0.9.5 Installed LeftChildRightSiblingTrees ── v0.2.1 Installed SplittablesBase ───────────── v0.1.15 Installed Setfield ──────────────────── v1.1.2 Installed Baselet ───────────────────── v0.1.1 Installed Transducers ───────────────── v0.4.85 Installed FASTX ─────────────────────── v2.1.7 Installed BenchmarkTools ────────────── v1.6.3 Installed PooledArrays ──────────────── v1.4.3 Installed CodonMolecularEvolution ───── v0.2.0 Installed PDMats ────────────────────── v0.11.36 Installed WorkerUtilities ───────────── v1.6.1 Installed AxisArrays ────────────────── v0.4.8 Installed DocStringExtensions ───────── v0.9.5 Installed Interpolations ────────────── v0.15.1 Installed CompositionsBase ──────────── v0.1.2 Installed Rmath_jll ─────────────────── v0.5.1+0 Installed StringViews ───────────────── v1.3.5 Installed KernelDensity ─────────────── v0.6.10 Installed HashArrayMappedTries ──────── v0.2.0 Installed AliasTables ───────────────── v1.1.3 Installed SimpleUnPack ──────────────── v1.1.0 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed RecipesBase ───────────────── v1.3.4 Installed NNlib ─────────────────────── v0.9.31 Installed SIMD ──────────────────────── v3.7.2 Installed DataAPI ───────────────────── v1.16.0 Installed InvertedIndices ───────────── v1.3.1 Installed StaticArraysCore ──────────── v1.4.4 Installed AxisAlgorithms ────────────── v1.1.0 Installed BangBang ──────────────────── v0.4.6 Installed AbstractFFTs ──────────────── v1.5.0 Installed StaticArrays ──────────────── v1.9.15 Installed StringManipulation ────────── v0.4.1 Installed Requires ──────────────────── v1.3.1 Installed Rmath ─────────────────────── v0.9.0 Installed Parsers ───────────────────── v2.8.3 Installed LogExpFunctions ───────────── v0.3.29 Installed JSON ──────────────────────── v0.21.4 Installed UnsafeAtomics ─────────────── v0.3.0 Installed PrettyTables ──────────────── v2.4.0 Installed Distributions ─────────────── v0.25.122 Installed StatsFuns ─────────────────── v1.5.2 Installed WeakRefStrings ────────────── v1.4.2 Installed JLLWrappers ───────────────── v1.7.1 Installed BioGenerics ───────────────── v0.1.5 Installed VectorInterface ───────────── v0.5.0 Installed DataFrames ────────────────── v1.8.1 Installed NLopt ─────────────────────── v1.2.1 Installed ParameterHandling ─────────── v0.5.0 Installed StatisticalTraits ─────────── v3.5.0 Installed IterTools ─────────────────── v1.10.0 Installed MicroCollections ──────────── v0.2.0 Installed Accessors ─────────────────── v0.1.42 Installed FilePathsBase ─────────────── v0.9.24 Installed Adapt ─────────────────────── v4.4.0 Installed HypergeometricFunctions ───── v0.3.28 Installed ConstructionBase ──────────── v1.6.0 Installed Compat ────────────────────── v4.18.1 Installed Suppressor ────────────────── v0.2.8 Installed ProgressLogging ───────────── v0.1.5 Installed TranscodingStreams ────────── v0.11.3 Installed Statistics ────────────────── v1.11.1 Installed StatsAPI ──────────────────── v1.7.1 Installed ProgressMeter ─────────────── v1.11.0 Installed Atomix ────────────────────── v1.1.2 Installed LogDensityProblems ────────── v2.2.0 Installed OffsetArrays ──────────────── v1.17.0 Installed CSV ───────────────────────── v0.10.15 Installed PrecompileTools ───────────── v1.3.3 Installed ChainRulesCore ────────────── v1.26.0 Installed Ratios ────────────────────── v0.4.5 Installed PtrArrays ─────────────────── v1.3.0 Installed ScientificTypesBase ───────── v3.0.0 Installed AbstractMCMC ──────────────── v5.9.0 Installed IntervalSets ──────────────── v0.7.11 Installed KernelAbstractions ────────── v0.9.38 Installed SpecialFunctions ──────────── v2.6.1 Installed FFTW ──────────────────────── v1.10.0 Installed EllipticalSliceSampling ───── v2.0.0 Installed FFTW_jll ──────────────────── v3.3.11+0 Installed NLopt_jll ─────────────────── v2.10.0+0 Installed MLJModelInterface ─────────── v1.12.0 Installed Automa ────────────────────── v1.1.0 Installing 4 artifacts Installed artifact Rmath 121.9 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact NLopt 322.7 KiB Installed artifact FFTW 2.2 MiB Updating `~/.julia/environments/v1.14/Project.toml` [6511b2a3] + CodonMolecularEvolution v0.2.0 Updating `~/.julia/environments/v1.14/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [80f14c24] + AbstractMCMC v5.9.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [4fba245c] + ArrayInterface v7.22.0 [a9b6321e] + Atomix v1.1.2 [67c07d97] + Automa v1.1.0 [13072b0f] + AxisAlgorithms v1.1.0 [39de3d68] + AxisArrays v0.4.8 [198e06fe] + BangBang v0.4.6 [9718e550] + Baselet v0.1.1 [6e4b80f9] + BenchmarkTools v1.6.3 [47718e42] + BioGenerics v0.1.5 [fa961155] + CEnum v0.5.0 [336ed68f] + CSV v0.10.15 [d360d2e6] + ChainRulesCore v1.26.0 [944b1d66] + CodecZlib v0.7.8 [6511b2a3] + CodonMolecularEvolution v0.2.0 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [88cd18e8] + ConsoleProgressMonitor v0.1.2 [187b0558] + ConstructionBase v1.6.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.1 [864edb3b] + DataStructures v0.19.1 [e2d170a0] + DataValueInterfaces v1.0.0 [244e2a9f] + DefineSingletons v0.1.2 [31c24e10] + Distributions v0.25.122 [ffbed154] + DocStringExtensions v0.9.5 [cad2338a] + EllipticalSliceSampling v2.0.0 [c2308a5c] + FASTX v2.1.7 [7a1cc6ca] + FFTW v1.10.0 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.14.0 [46192b85] + GPUArraysCore v0.2.0 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 [22cec73e] + InitialValues v0.3.1 [842dd82b] + InlineStrings v1.4.5 ⌅ [a98d9a8b] + Interpolations v0.15.1 [8197267c] + IntervalSets v0.7.11 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 ⌅ [682c06a0] + JSON v0.21.4 [63c18a36] + KernelAbstractions v0.9.38 [5ab0869b] + KernelDensity v0.6.10 ⌅ [0b1a1467] + KrylovKit v0.9.5 [b964fa9f] + LaTeXStrings v1.4.0 [1d6d02ad] + LeftChildRightSiblingTrees v0.2.1 [6fdf6af0] + LogDensityProblems v2.2.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 ⌅ [c7f686f2] + MCMCChains v6.0.7 [be115224] + MCMCDiagnosticTools v0.3.15 [e80e1ace] + MLJModelInterface v1.12.0 [1914dd2f] + MacroTools v0.5.16 [128add7d] + MicroCollections v0.2.0 [e1d29d7a] + Missings v1.2.0 [9f975960] + MolecularEvolution v0.2.7 [76087f3c] + NLopt v1.2.1 [872c559c] + NNlib v0.9.31 [c020b1a1] + NaturalSort v1.0.0 [6fe1bfb0] + OffsetArrays v1.17.0 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.36 [65ce6f38] + PackageExtensionCompat v1.0.2 [2412ca09] + ParameterHandling v0.5.0 [69de0a69] + Parsers v2.8.3 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 ⌅ [08abe8d2] + PrettyTables v2.4.0 [33c8b6b6] + ProgressLogging v0.1.5 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [b3c3ace0] + RangeArrays v0.3.2 [c84ed2f1] + Ratios v0.4.5 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [fdea26ae] + SIMD v3.7.2 [30f210dd] + ScientificTypesBase v3.0.0 [7e506255] + ScopedValues v1.5.0 [91c51154] + SentinelArrays v1.4.8 [efcf1570] + Setfield v1.1.2 [ce78b400] + SimpleUnPack v1.1.0 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.6.1 [171d559e] + SplittablesBase v0.1.15 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.4 [64bff920] + StatisticalTraits v3.5.0 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.7 [4c63d2b9] + StatsFuns v1.5.2 [892a3eda] + StringManipulation v0.4.1 [354b36f9] + StringViews v1.3.5 [fd094767] + Suppressor v0.2.8 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [5d786b92] + TerminalLoggers v0.1.7 [3bb67fe8] + TranscodingStreams v0.11.3 [28d57a85] + Transducers v0.4.85 [013be700] + UnsafeAtomics v0.3.0 [409d34a3] + VectorInterface v0.5.0 [ea10d353] + WeakRefStrings v1.4.2 [efce3f68] + WoodburyMatrices v1.0.0 [76eceee3] + WorkerUtilities v1.6.1 [f5851436] + FFTW_jll v3.3.11+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [856f044c] + MKL_jll v2025.2.0+0 [079eb43e] + NLopt_jll v2.10.0+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v1.0.0 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [9abbd945] + Profile v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.16.0+0 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.9.9 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.67.1+0 [3f19e933] + p7zip_jll v17.6.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 11.38s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4649.3 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. 1 dependency had output during precompilation: ┌ TestEnv │ WARNING: Imported binding Operations.project_rel_path was undeclared at import time during import to TestEnv. └ ┌ Error: Failed to use TestEnv.jl; test dependencies will not be precompiled │ exception = │ UndefVarError: `project_rel_path` not defined in `TestEnv` │ Suggestion: this global was defined as `Pkg.Operations.project_rel_path` but not assigned a value. │ Stacktrace: │ [1] get_test_dir(ctx::Pkg.Types.Context, pkgspec::PackageSpec) │ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:75 │ [2] test_dir_has_project_file │ @ ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:52 [inlined] │ [3] maybe_gen_project_override! │ @ ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:83 [inlined] │ [4] activate(pkg::String; allow_reresolve::Bool) │ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:12 │ [5] activate(pkg::String) │ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:9 │ [6] top-level scope │ @ /PkgEval.jl/scripts/precompile.jl:24 │ [7] include(mod::Module, _path::String) │ @ Base ./Base.jl:309 │ [8] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:344 │ [9] _start() │ @ Base ./client.jl:577 └ @ Main /PkgEval.jl/scripts/precompile.jl:26 Precompiling package dependencies... Precompiling packages... 4172.6 ms ✓ MacroTools 1855.4 ms ✓ InlineStrings 956.4 ms ✓ Reexport 1469.9 ms ✓ ConstructionBase 2344.8 ms ✓ IrrationalConstants 748.9 ms ✓ DataValueInterfaces 787.2 ms ✓ StatsAPI 1074.6 ms ✓ IterTools 979.1 ms ✓ IntervalSets 785.7 ms ✓ CEnum 1042.9 ms ✓ StringViews 869.7 ms ✓ ArgCheck 1228.5 ms ✓ TranscodingStreams 815.6 ms ✓ LaTeXStrings 2189.5 ms ✓ Baselet 1065.6 ms ✓ Statistics 903.4 ms ✓ StaticArraysCore 741.5 ms ✓ Suppressor 829.3 ms ✓ PtrArrays 1066.2 ms ✓ VectorInterface 696.0 ms ✓ NaturalSort 830.9 ms ✓ DataAPI 2677.6 ms ✓ UnsafeAtomics 771.5 ms ✓ InvertedIndices 780.2 ms ✓ InverseFunctions 737.4 ms ✓ CompositionsBase 945.6 ms ✓ AbstractTrees 744.9 ms ✓ SimpleUnPack 1471.4 ms ✓ InitialValues 992.6 ms ✓ AbstractFFTs 931.0 ms ✓ WorkerUtilities 2157.6 ms ✓ FillArrays 782.8 ms ✓ ScientificTypesBase 801.4 ms ✓ RangeArrays 1234.5 ms ✓ OrderedCollections 887.4 ms ✓ HashArrayMappedTries 1266.0 ms ✓ ProgressLogging 1076.8 ms ✓ DocStringExtensions 831.4 ms ✓ DefineSingletons 1594.7 ms ✓ OffsetArrays 724.9 ms ✓ IteratorInterfaceExtensions 747.4 ms ✓ PackageExtensionCompat 1757.2 ms ✓ Crayons 1126.3 ms ✓ Requires 1181.4 ms ✓ SuiteSparse 1303.1 ms ✓ WoodburyMatrices 2785.5 ms ✓ SentinelArrays 1049.6 ms ✓ LoggingExtras 1729.7 ms ✓ ProgressMeter 1126.0 ms ✓ Compat 1111.1 ms ✓ Preferences 922.3 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 706.2 ms ✓ IntervalSets → IntervalSetsRandomExt 1099.7 ms ✓ ConstructionBase → ConstructionBaseIntervalSetsExt 868.8 ms ✓ BioGenerics 910.0 ms ✓ CodecZlib 1265.8 ms ✓ Statistics → SparseArraysExt 742.2 ms ✓ IntervalSets → IntervalSetsStatisticsExt 947.0 ms ✓ AliasTables 919.3 ms ✓ Missings 992.2 ms ✓ PooledArrays 954.8 ms ✓ Atomix 810.5 ms ✓ InverseFunctions → InverseFunctionsDatesExt 1557.1 ms ✓ InverseFunctions → InverseFunctionsTestExt 749.7 ms ✓ CompositionsBase → CompositionsBaseInverseFunctionsExt 805.2 ms ✓ LeftChildRightSiblingTrees 3601.8 ms ✓ AbstractFFTs → AbstractFFTsTestExt 1478.1 ms ✓ FillArrays → FillArraysSparseArraysExt 926.7 ms ✓ FillArrays → FillArraysStatisticsExt 816.2 ms ✓ StatisticalTraits 3433.3 ms ✓ DataStructures 842.5 ms ✓ ScopedValues 1496.9 ms ✓ LogExpFunctions 2279.1 ms ✓ LogDensityProblems 701.7 ms ✓ TableTraits 3053.2 ms ✓ KrylovKit 770.7 ms ✓ Ratios 882.4 ms ✓ Adapt 1757.3 ms ✓ PDMats 1356.2 ms ✓ AxisAlgorithms 871.7 ms ✓ ConsoleProgressMonitor 1484.1 ms ✓ Compat → CompatLinearAlgebraExt 1155.9 ms ✓ PrecompileTools 1289.4 ms ✓ JLLWrappers 2947.9 ms ✓ Setfield 1516.3 ms ✓ AxisArrays 4662.0 ms ✓ Accessors 1968.5 ms ✓ TerminalLoggers 2896.1 ms ✓ MLJModelInterface 1020.0 ms ✓ SortingAlgorithms 2195.6 ms ✓ QuadGK 775.4 ms ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt 1632.6 ms ✓ Tables 1078.8 ms ✓ ArrayInterface 1187.6 ms ✓ Adapt → AdaptSparseArraysExt 1125.6 ms ✓ GPUArraysCore 761.7 ms ✓ OffsetArrays → OffsetArraysAdaptExt 1366.5 ms ✓ FillArrays → FillArraysPDMatsExt 2502.9 ms ✓ ChainRulesCore 2071.6 ms ✓ FilePathsBase 2906.5 ms ✓ StringManipulation Precompilation completed after 164.94s ################################################################################ # Testing # Testing CodonMolecularEvolution Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function. Updating `/tmp/jl_Zy3P6p/Project.toml` [6511b2a3] + CodonMolecularEvolution v0.2.0 [a93c6f00] ↑ DataFrames v1.6.1 ⇒ v1.8.1 [c2308a5c] ↑ FASTX v2.1.3 ⇒ v2.1.7 [9f975960] ↑ MolecularEvolution v0.1.0 ⇒ v0.2.7 [8dfed614] ~ Test ⇒ v1.11.0 Updating `/tmp/jl_Zy3P6p/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [80f14c24] + AbstractMCMC v5.9.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [4fba245c] + ArrayInterface v7.22.0 [a9b6321e] + Atomix v1.1.2 [67c07d97] ↑ Automa v1.0.0 ⇒ v1.1.0 [13072b0f] + AxisAlgorithms v1.1.0 [39de3d68] + AxisArrays v0.4.8 [198e06fe] + BangBang v0.4.6 [9718e550] + Baselet v0.1.1 [6e4b80f9] + BenchmarkTools v1.6.3 [47718e42] ↑ BioGenerics v0.1.2 ⇒ v0.1.5 [fa961155] + CEnum v0.5.0 [336ed68f] + CSV v0.10.15 [49dc2e85] - Calculus v0.5.1 [d360d2e6] + ChainRulesCore v1.26.0 [944b1d66] + CodecZlib v0.7.8 [6511b2a3] + CodonMolecularEvolution v0.2.0 [34da2185] ↑ Compat v4.9.0 ⇒ v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [88cd18e8] + ConsoleProgressMonitor v0.1.2 [187b0558] + ConstructionBase v1.6.0 [9a962f9c] ↑ DataAPI v1.15.0 ⇒ v1.16.0 [a93c6f00] ↑ DataFrames v1.6.1 ⇒ v1.8.1 [864edb3b] ↑ DataStructures v0.18.15 ⇒ v0.19.1 [244e2a9f] + DefineSingletons v0.1.2 [31c24e10] ↑ Distributions v0.25.100 ⇒ v0.25.122 [ffbed154] ↑ DocStringExtensions v0.9.3 ⇒ v0.9.5 [fa6b7ba4] - DualNumbers v0.6.8 [cad2338a] + EllipticalSliceSampling v2.0.0 [c2308a5c] ↑ FASTX v2.1.3 ⇒ v2.1.7 [7a1cc6ca] + FFTW v1.10.0 [48062228] + FilePathsBase v0.9.24 [1a297f60] ↑ FillArrays v1.5.0 ⇒ v1.14.0 [46192b85] + GPUArraysCore v0.2.0 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] ↑ HypergeometricFunctions v0.3.23 ⇒ v0.3.28 [22cec73e] + InitialValues v0.3.1 [842dd82b] ↑ InlineStrings v1.4.0 ⇒ v1.4.5 ⌅ [a98d9a8b] + Interpolations v0.15.1 [8197267c] + IntervalSets v0.7.11 [3587e190] + InverseFunctions v0.1.17 [41ab1584] ↑ InvertedIndices v1.3.0 ⇒ v1.3.1 [92d709cd] ↑ IrrationalConstants v0.2.2 ⇒ v0.2.6 [c8e1da08] + IterTools v1.10.0 [692b3bcd] ↑ JLLWrappers v1.5.0 ⇒ v1.7.1 ⌅ [682c06a0] + JSON v0.21.4 [63c18a36] + KernelAbstractions v0.9.38 [5ab0869b] + KernelDensity v0.6.10 ⌅ [0b1a1467] + KrylovKit v0.9.5 [b964fa9f] ↑ LaTeXStrings v1.3.1 ⇒ v1.4.0 [1d6d02ad] + LeftChildRightSiblingTrees v0.2.1 [6fdf6af0] + LogDensityProblems v2.2.0 [2ab3a3ac] ↑ LogExpFunctions v0.3.25 ⇒ v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 ⌅ [c7f686f2] + MCMCChains v6.0.7 [be115224] + MCMCDiagnosticTools v0.3.15 [e80e1ace] + MLJModelInterface v1.12.0 [1914dd2f] + MacroTools v0.5.16 [128add7d] + MicroCollections v0.2.0 [e1d29d7a] ↑ Missings v1.1.0 ⇒ v1.2.0 [9f975960] ↑ MolecularEvolution v0.1.0 ⇒ v0.2.7 [76087f3c] + NLopt v1.2.1 [872c559c] + NNlib v0.9.31 [77ba4419] - NaNMath v1.0.2 [c020b1a1] + NaturalSort v1.0.0 [6fe1bfb0] + OffsetArrays v1.17.0 [bac558e1] ↑ OrderedCollections v1.6.2 ⇒ v1.8.1 [90014a1f] ↑ PDMats v0.11.17 ⇒ v0.11.36 [65ce6f38] + PackageExtensionCompat v1.0.2 [2412ca09] + ParameterHandling v0.5.0 [69de0a69] ↑ Parsers v2.8.1 ⇒ v2.8.3 [aea7be01] ↑ PrecompileTools v1.1.2 ⇒ v1.3.3 [21216c6a] ↑ Preferences v1.4.0 ⇒ v1.5.0 ⌅ [08abe8d2] ↑ PrettyTables v2.3.1 ⇒ v2.4.0 [33c8b6b6] + ProgressLogging v0.1.5 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] ↑ QuadGK v2.8.2 ⇒ v2.11.2 [b3c3ace0] + RangeArrays v0.3.2 [c84ed2f1] + Ratios v0.4.5 [3cdcf5f2] + RecipesBase v1.3.4 [ae029012] ↑ Requires v1.3.0 ⇒ v1.3.1 [79098fc4] ↑ Rmath v0.7.1 ⇒ v0.9.0 [fdea26ae] + SIMD v3.7.2 [30f210dd] + ScientificTypesBase v3.0.0 [7e506255] + ScopedValues v1.5.0 [91c51154] ↑ SentinelArrays v1.4.1 ⇒ v1.4.8 [efcf1570] + Setfield v1.1.2 [ce78b400] + SimpleUnPack v1.1.0 [a2af1166] ↑ SortingAlgorithms v1.1.1 ⇒ v1.2.2 [276daf66] ↑ SpecialFunctions v2.3.1 ⇒ v2.6.1 [171d559e] + SplittablesBase v0.1.15 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.4 [64bff920] + StatisticalTraits v3.5.0 [10745b16] ↑ Statistics v1.10.0 ⇒ v1.11.1 [82ae8749] ↑ StatsAPI v1.6.0 ⇒ v1.7.1 [2913bbd2] ↑ StatsBase v0.34.0 ⇒ v0.34.7 [4c63d2b9] ↑ StatsFuns v1.3.0 ⇒ v1.5.2 [892a3eda] ↑ StringManipulation v0.3.4 ⇒ v0.4.1 [354b36f9] ↑ StringViews v1.3.3 ⇒ v1.3.5 [fd094767] + Suppressor v0.2.8 [bd369af6] ↑ Tables v1.11.1 ⇒ v1.12.1 [5d786b92] + TerminalLoggers v0.1.7 [3bb67fe8] ↑ TranscodingStreams v0.9.13 ⇒ v0.11.3 [28d57a85] + Transducers v0.4.85 [013be700] + UnsafeAtomics v0.3.0 [409d34a3] + VectorInterface v0.5.0 [ea10d353] + WeakRefStrings v1.4.2 [efce3f68] + WoodburyMatrices v1.0.0 [76eceee3] + WorkerUtilities v1.6.1 [f5851436] + FFTW_jll v3.3.11+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [856f044c] + MKL_jll v2025.2.0+0 [c8ffd9c3] - MbedTLS_jll v2.28.2+1 [079eb43e] + NLopt_jll v2.10.0+0 [efe28fd5] ↑ OpenSpecFun_jll v0.5.5+0 ⇒ v0.5.6+0 [f50d1b31] ↑ Rmath_jll v0.4.0+0 ⇒ v0.5.1+0 [1317d2d5] + oneTBB_jll v2022.0.0+1 [0dad84c5] ↑ ArgTools v1.1.1 ⇒ v1.1.2 [56f22d72] ~ Artifacts ⇒ v1.11.0 [2a0f44e3] ~ Base64 ⇒ v1.11.0 [ade2ca70] ~ Dates ⇒ v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] ↑ Downloads v1.6.0 ⇒ v1.7.0 [7b1f6079] ~ FileWatching ⇒ v1.11.0 [9fa8497b] ~ Future ⇒ v1.11.0 [b77e0a4c] ~ InteractiveUtils ⇒ v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] ↑ LibCURL v0.6.4 ⇒ v1.0.0 [76f85450] ~ LibGit2 ⇒ v1.11.0 [8f399da3] ~ Libdl ⇒ v1.11.0 [37e2e46d] ~ LinearAlgebra ⇒ v1.13.0 [56ddb016] ~ Logging ⇒ v1.11.0 [d6f4376e] ~ Markdown ⇒ v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] ↑ NetworkOptions v1.2.0 ⇒ v1.3.0 [44cfe95a] ↑ Pkg v1.10.0 ⇒ v1.13.0 [de0858da] ~ Printf ⇒ v1.11.0 [9abbd945] + Profile v1.11.0 [3fa0cd96] ~ REPL ⇒ v1.11.0 [9a3f8284] ~ Random ⇒ v1.11.0 [ea8e919c] ↑ SHA v0.7.0 ⇒ v1.0.0 [9e88b42a] ~ Serialization ⇒ v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] ~ Sockets ⇒ v1.11.0 [2f01184e] ↑ SparseArrays v1.10.0 ⇒ v1.13.0 [f489334b] + StyledStrings v1.11.0 [8dfed614] ~ Test ⇒ v1.11.0 [cf7118a7] ~ UUIDs ⇒ v1.11.0 [4ec0a83e] ~ Unicode ⇒ v1.11.0 [e66e0078] ↑ CompilerSupportLibraries_jll v1.0.5+1 ⇒ v1.3.0+1 [deac9b47] ↑ LibCURL_jll v8.4.0+0 ⇒ v8.16.0+0 [e37daf67] ↑ LibGit2_jll v1.6.4+0 ⇒ v1.9.1+0 [29816b5a] ↑ LibSSH2_jll v1.11.0+1 ⇒ v1.11.3+1 [14a3606d] ↑ MozillaCACerts_jll v2023.1.10 ⇒ v2025.9.9 [4536629a] ↑ OpenBLAS_jll v0.3.23+2 ⇒ v0.3.29+0 [05823500] ↑ OpenLibm_jll v0.8.1+2 ⇒ v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.47.0+0 [bea87d4a] ↑ SuiteSparse_jll v7.2.1+1 ⇒ v7.10.1+0 [83775a58] ↑ Zlib_jll v1.2.13+1 ⇒ v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] ↑ libblastrampoline_jll v5.8.0+1 ⇒ v5.15.0+0 [8e850ede] ↑ nghttp2_jll v1.52.0+1 ⇒ v1.67.1+0 [3f19e933] ↑ p7zip_jll v17.4.0+2 ⇒ v17.6.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Test Successfully re-resolved Status `/tmp/jl_Zy3P6p/Project.toml` [6511b2a3] CodonMolecularEvolution v0.2.0 [a93c6f00] DataFrames v1.8.1 [c2308a5c] FASTX v2.1.7 [9f975960] MolecularEvolution v0.2.7 [8dfed614] Test v1.11.0 Status `/tmp/jl_Zy3P6p/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 [80f14c24] AbstractMCMC v5.9.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [dce04be8] ArgCheck v2.5.0 [4fba245c] ArrayInterface v7.22.0 [a9b6321e] Atomix v1.1.2 [67c07d97] Automa v1.1.0 [13072b0f] AxisAlgorithms v1.1.0 [39de3d68] AxisArrays v0.4.8 [198e06fe] BangBang v0.4.6 [9718e550] Baselet v0.1.1 [6e4b80f9] BenchmarkTools v1.6.3 [47718e42] BioGenerics v0.1.5 [fa961155] CEnum v0.5.0 [336ed68f] CSV v0.10.15 [d360d2e6] ChainRulesCore v1.26.0 [944b1d66] CodecZlib v0.7.8 [6511b2a3] CodonMolecularEvolution v0.2.0 [34da2185] Compat v4.18.1 [a33af91c] CompositionsBase v0.1.2 [88cd18e8] ConsoleProgressMonitor v0.1.2 [187b0558] ConstructionBase v1.6.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.8.1 [864edb3b] DataStructures v0.19.1 [e2d170a0] DataValueInterfaces v1.0.0 [244e2a9f] DefineSingletons v0.1.2 [31c24e10] Distributions v0.25.122 [ffbed154] DocStringExtensions v0.9.5 [cad2338a] EllipticalSliceSampling v2.0.0 [c2308a5c] FASTX v2.1.7 [7a1cc6ca] FFTW v1.10.0 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.14.0 [46192b85] GPUArraysCore v0.2.0 [076d061b] HashArrayMappedTries v0.2.0 [34004b35] HypergeometricFunctions v0.3.28 [22cec73e] InitialValues v0.3.1 [842dd82b] InlineStrings v1.4.5 ⌅ [a98d9a8b] Interpolations v0.15.1 [8197267c] IntervalSets v0.7.11 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.6 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 ⌅ [682c06a0] JSON v0.21.4 [63c18a36] KernelAbstractions v0.9.38 [5ab0869b] KernelDensity v0.6.10 ⌅ [0b1a1467] KrylovKit v0.9.5 [b964fa9f] LaTeXStrings v1.4.0 [1d6d02ad] LeftChildRightSiblingTrees v0.2.1 [6fdf6af0] LogDensityProblems v2.2.0 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.2.0 ⌅ [c7f686f2] MCMCChains v6.0.7 [be115224] MCMCDiagnosticTools v0.3.15 [e80e1ace] MLJModelInterface v1.12.0 [1914dd2f] MacroTools v0.5.16 [128add7d] MicroCollections v0.2.0 [e1d29d7a] Missings v1.2.0 [9f975960] MolecularEvolution v0.2.7 [76087f3c] NLopt v1.2.1 [872c559c] NNlib v0.9.31 [c020b1a1] NaturalSort v1.0.0 [6fe1bfb0] OffsetArrays v1.17.0 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.36 [65ce6f38] PackageExtensionCompat v1.0.2 [2412ca09] ParameterHandling v0.5.0 [69de0a69] Parsers v2.8.3 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 ⌅ [08abe8d2] PrettyTables v2.4.0 [33c8b6b6] ProgressLogging v0.1.5 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [b3c3ace0] RangeArrays v0.3.2 [c84ed2f1] Ratios v0.4.5 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.9.0 [fdea26ae] SIMD v3.7.2 [30f210dd] ScientificTypesBase v3.0.0 [7e506255] ScopedValues v1.5.0 [91c51154] SentinelArrays v1.4.8 [efcf1570] Setfield v1.1.2 [ce78b400] SimpleUnPack v1.1.0 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.6.1 [171d559e] SplittablesBase v0.1.15 [90137ffa] StaticArrays v1.9.15 [1e83bf80] StaticArraysCore v1.4.4 [64bff920] StatisticalTraits v3.5.0 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.7 [4c63d2b9] StatsFuns v1.5.2 [892a3eda] StringManipulation v0.4.1 [354b36f9] StringViews v1.3.5 [fd094767] Suppressor v0.2.8 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [5d786b92] TerminalLoggers v0.1.7 [3bb67fe8] TranscodingStreams v0.11.3 [28d57a85] Transducers v0.4.85 [013be700] UnsafeAtomics v0.3.0 [409d34a3] VectorInterface v0.5.0 [ea10d353] WeakRefStrings v1.4.2 [efce3f68] WoodburyMatrices v1.0.0 [76eceee3] WorkerUtilities v1.6.1 [f5851436] FFTW_jll v3.3.11+0 [1d5cc7b8] IntelOpenMP_jll v2025.2.0+0 [856f044c] MKL_jll v2025.2.0+0 [079eb43e] NLopt_jll v2.10.0+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [1317d2d5] oneTBB_jll v2022.0.0+1 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v1.0.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [9abbd945] Profile v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v1.0.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.16.0+0 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.9.9 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.47.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.67.1+0 [3f19e933] p7zip_jll v17.6.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... ERROR: LoadError: UndefVarError: `T` not defined in `SIMD` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] top-level scope @ ~/.julia/packages/SIMD/UiGbs/src/arrayops.jl:4 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [3] top-level scope @ ~/.julia/packages/SIMD/UiGbs/src/SIMD.jl:25 [4] include(mod::Module, _path::String) @ Base ./Base.jl:309 [5] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2817 [6] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2576 [7] macro expansion @ ./loading.jl:2504 [inlined] [8] macro expansion @ ./lock.jl:376 [inlined] [9] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2468 [10] require @ ./loading.jl:2444 [inlined] [11] eval_import_path @ ./module.jl:36 [inlined] [12] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [13] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr}) @ Base ./module.jl:101 [14] top-level scope @ ~/.julia/packages/Automa/EyNRt/src/Automa.jl:4 [15] include(mod::Module, _path::String) @ Base ./Base.jl:309 [16] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2817 [17] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2576 [18] macro expansion @ ./loading.jl:2504 [inlined] [19] macro expansion @ ./lock.jl:376 [inlined] [20] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2468 [21] require @ ./loading.jl:2444 [inlined] [22] eval_import_path @ ./module.jl:36 [inlined] [23] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [24] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr}) @ Base ./module.jl:101 [25] top-level scope @ ~/.julia/packages/FASTX/KGKFv/src/FASTX.jl:4 [26] include(mod::Module, _path::String) @ Base ./Base.jl:309 [27] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2817 [28] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2576 [29] macro expansion @ ./loading.jl:2504 [inlined] [30] macro expansion @ ./lock.jl:376 [inlined] [31] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2468 [32] require @ ./loading.jl:2444 [inlined] [33] eval_import_path @ ./module.jl:36 [inlined] [34] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [35] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [36] top-level scope @ ~/.julia/packages/CodonMolecularEvolution/dBmJx/test/runtests.jl:1 [37] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [38] top-level scope @ none:6 [39] eval(m::Module, e::Any) @ Core ./boot.jl:489 [40] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [41] _start() @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/SIMD/UiGbs/src/arrayops.jl:4 in expression starting at /home/pkgeval/.julia/packages/SIMD/UiGbs/src/SIMD.jl:1 in expression starting at /home/pkgeval/.julia/packages/Automa/EyNRt/src/Automa.jl:1 in expression starting at /home/pkgeval/.julia/packages/FASTX/KGKFv/src/FASTX.jl:1 in expression starting at /home/pkgeval/.julia/packages/CodonMolecularEvolution/dBmJx/test/runtests.jl:1 Testing failed after 114.94s ERROR: LoadError: Package CodonMolecularEvolution errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2936 [3] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2785 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:572 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:548 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [9] test @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [12] include(mod::Module, _path::String) @ Base ./Base.jl:309 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 327.66s: package tests unexpectedly errored