Package evaluation to test CodonMolecularEvolution on Julia 1.14.0-DEV.14 (ec5cf08762*) started at 2025-10-30T23:06:08.162


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 10.35s


################################################################################
# Installation
#

Installing CodonMolecularEvolution...
   Resolving package versions...
   Installed DefineSingletons ──────────── v0.1.2
   Installed MKL_jll ───────────────────── v2025.2.0+0
   Installed SentinelArrays ────────────── v1.4.8
   Installed InlineStrings ─────────────── v1.4.5
   Installed InitialValues ─────────────── v0.3.1
   Installed ArgCheck ──────────────────── v2.5.0
   Installed OrderedCollections ────────── v1.8.1
   Installed QuadGK ────────────────────── v2.11.2
   Installed OpenSpecFun_jll ───────────── v0.5.6+0
   Installed ScopedValues ──────────────── v1.5.0
   Installed WoodburyMatrices ──────────── v1.0.0
   Installed Tables ────────────────────── v1.12.1
   Installed PackageExtensionCompat ────── v1.0.2
   Installed Reexport ──────────────────── v1.2.2
   Installed InverseFunctions ──────────── v0.1.17
   Installed Missings ──────────────────── v1.2.0
   Installed Preferences ───────────────── v1.5.0
   Installed LaTeXStrings ──────────────── v1.4.0
   Installed TableTraits ───────────────── v1.0.1
   Installed MCMCChains ────────────────── v6.0.7
   Installed RangeArrays ───────────────── v0.3.2
   Installed Crayons ───────────────────── v4.1.1
   Installed SortingAlgorithms ─────────── v1.2.2
   Installed NaturalSort ───────────────── v1.0.0
   Installed oneTBB_jll ────────────────── v2022.0.0+1
   Installed DataStructures ────────────── v0.19.1
   Installed AbstractTrees ─────────────── v0.4.5
   Installed FillArrays ────────────────── v1.14.0
   Installed MacroTools ────────────────── v0.5.16
   Installed StatsBase ─────────────────── v0.34.7
   Installed CodecZlib ─────────────────── v0.7.8
   Installed ArrayInterface ────────────── v7.22.0
   Installed ConsoleProgressMonitor ────── v0.1.2
   Installed IntelOpenMP_jll ───────────── v2025.2.0+0
   Installed CEnum ─────────────────────── v0.5.0
   Installed DataValueInterfaces ───────── v1.0.0
   Installed KrylovKit ─────────────────── v0.9.5
   Installed GPUArraysCore ─────────────── v0.2.0
   Installed LoggingExtras ─────────────── v1.2.0
   Installed IrrationalConstants ───────── v0.2.6
   Installed TerminalLoggers ───────────── v0.1.7
   Installed MCMCDiagnosticTools ───────── v0.3.15
   Installed MolecularEvolution ────────── v0.2.7
   Installed LeftChildRightSiblingTrees ── v0.2.1
   Installed SplittablesBase ───────────── v0.1.15
   Installed Baselet ───────────────────── v0.1.1
   Installed Setfield ──────────────────── v1.1.2
   Installed FASTX ─────────────────────── v2.1.7
   Installed Transducers ───────────────── v0.4.85
   Installed Interpolations ────────────── v0.15.1
   Installed PooledArrays ──────────────── v1.4.3
   Installed BenchmarkTools ────────────── v1.6.3
   Installed CodonMolecularEvolution ───── v0.2.0
   Installed PDMats ────────────────────── v0.11.36
   Installed WorkerUtilities ───────────── v1.6.1
   Installed Rmath_jll ─────────────────── v0.5.1+0
   Installed CompositionsBase ──────────── v0.1.2
   Installed SimpleUnPack ──────────────── v1.1.0
   Installed DocStringExtensions ───────── v0.9.5
   Installed AxisArrays ────────────────── v0.4.8
   Installed KernelDensity ─────────────── v0.6.10
   Installed StringViews ───────────────── v1.3.5
   Installed HashArrayMappedTries ──────── v0.2.0
   Installed AliasTables ───────────────── v1.1.3
   Installed RecipesBase ───────────────── v1.3.4
   Installed IteratorInterfaceExtensions ─ v1.0.0
   Installed SIMD ──────────────────────── v3.7.2
   Installed DataAPI ───────────────────── v1.16.0
   Installed InvertedIndices ───────────── v1.3.1
   Installed StaticArraysCore ──────────── v1.4.4
   Installed AbstractFFTs ──────────────── v1.5.0
   Installed BangBang ──────────────────── v0.4.6
   Installed StaticArrays ──────────────── v1.9.15
   Installed NNlib ─────────────────────── v0.9.31
   Installed AxisAlgorithms ────────────── v1.1.0
   Installed StringManipulation ────────── v0.4.1
   Installed Requires ──────────────────── v1.3.1
   Installed LogExpFunctions ───────────── v0.3.29
   Installed JSON ──────────────────────── v0.21.4
   Installed Parsers ───────────────────── v2.8.3
   Installed Rmath ─────────────────────── v0.9.0
   Installed PrettyTables ──────────────── v2.4.0
   Installed UnsafeAtomics ─────────────── v0.3.0
   Installed Distributions ─────────────── v0.25.122
   Installed StatsFuns ─────────────────── v1.5.2
   Installed WeakRefStrings ────────────── v1.4.2
   Installed JLLWrappers ───────────────── v1.7.1
   Installed BioGenerics ───────────────── v0.1.5
   Installed VectorInterface ───────────── v0.5.0
   Installed ParameterHandling ─────────── v0.5.0
   Installed NLopt ─────────────────────── v1.2.1
   Installed StatisticalTraits ─────────── v3.5.0
   Installed DataFrames ────────────────── v1.8.1
   Installed IterTools ─────────────────── v1.10.0
   Installed MicroCollections ──────────── v0.2.0
   Installed Accessors ─────────────────── v0.1.42
   Installed FilePathsBase ─────────────── v0.9.24
   Installed Adapt ─────────────────────── v4.4.0
   Installed HypergeometricFunctions ───── v0.3.28
   Installed ConstructionBase ──────────── v1.6.0
   Installed Compat ────────────────────── v4.18.1
   Installed Suppressor ────────────────── v0.2.8
   Installed TranscodingStreams ────────── v0.11.3
   Installed ProgressLogging ───────────── v0.1.5
   Installed Statistics ────────────────── v1.11.1
   Installed CSV ───────────────────────── v0.10.15
   Installed StatsAPI ──────────────────── v1.7.1
   Installed ProgressMeter ─────────────── v1.11.0
   Installed Ratios ────────────────────── v0.4.5
   Installed LogDensityProblems ────────── v2.2.0
   Installed Atomix ────────────────────── v1.1.2
   Installed OffsetArrays ──────────────── v1.17.0
   Installed PrecompileTools ───────────── v1.3.3
   Installed ChainRulesCore ────────────── v1.26.0
   Installed PtrArrays ─────────────────── v1.3.0
   Installed ScientificTypesBase ───────── v3.0.0
   Installed KernelAbstractions ────────── v0.9.38
   Installed IntervalSets ──────────────── v0.7.11
   Installed FFTW ──────────────────────── v1.10.0
   Installed SpecialFunctions ──────────── v2.6.1
   Installed AbstractMCMC ──────────────── v5.9.0
   Installed EllipticalSliceSampling ───── v2.0.0
   Installed FFTW_jll ──────────────────── v3.3.11+0
   Installed NLopt_jll ─────────────────── v2.10.0+0
   Installed MLJModelInterface ─────────── v1.12.0
   Installed Automa ────────────────────── v1.1.0
  Installing 4 artifacts
   Installed artifact Rmath       121.9 KiB
   Installed artifact OpenSpecFun 194.9 KiB
   Installed artifact NLopt       322.7 KiB
   Installed artifact FFTW        2.2 MiB
    Updating `~/.julia/environments/v1.14/Project.toml`
  [6511b2a3] + CodonMolecularEvolution v0.2.0
    Updating `~/.julia/environments/v1.14/Manifest.toml`
  [621f4979] + AbstractFFTs v1.5.0
  [80f14c24] + AbstractMCMC v5.9.0
  [1520ce14] + AbstractTrees v0.4.5
  [7d9f7c33] + Accessors v0.1.42
  [79e6a3ab] + Adapt v4.4.0
  [66dad0bd] + AliasTables v1.1.3
  [dce04be8] + ArgCheck v2.5.0
  [4fba245c] + ArrayInterface v7.22.0
  [a9b6321e] + Atomix v1.1.2
  [67c07d97] + Automa v1.1.0
  [13072b0f] + AxisAlgorithms v1.1.0
  [39de3d68] + AxisArrays v0.4.8
  [198e06fe] + BangBang v0.4.6
  [9718e550] + Baselet v0.1.1
  [6e4b80f9] + BenchmarkTools v1.6.3
  [47718e42] + BioGenerics v0.1.5
  [fa961155] + CEnum v0.5.0
  [336ed68f] + CSV v0.10.15
  [d360d2e6] + ChainRulesCore v1.26.0
  [944b1d66] + CodecZlib v0.7.8
  [6511b2a3] + CodonMolecularEvolution v0.2.0
  [34da2185] + Compat v4.18.1
  [a33af91c] + CompositionsBase v0.1.2
  [88cd18e8] + ConsoleProgressMonitor v0.1.2
  [187b0558] + ConstructionBase v1.6.0
  [a8cc5b0e] + Crayons v4.1.1
  [9a962f9c] + DataAPI v1.16.0
  [a93c6f00] + DataFrames v1.8.1
  [864edb3b] + DataStructures v0.19.1
  [e2d170a0] + DataValueInterfaces v1.0.0
  [244e2a9f] + DefineSingletons v0.1.2
  [31c24e10] + Distributions v0.25.122
  [ffbed154] + DocStringExtensions v0.9.5
  [cad2338a] + EllipticalSliceSampling v2.0.0
  [c2308a5c] + FASTX v2.1.7
  [7a1cc6ca] + FFTW v1.10.0
  [48062228] + FilePathsBase v0.9.24
  [1a297f60] + FillArrays v1.14.0
  [46192b85] + GPUArraysCore v0.2.0
  [076d061b] + HashArrayMappedTries v0.2.0
  [34004b35] + HypergeometricFunctions v0.3.28
  [22cec73e] + InitialValues v0.3.1
  [842dd82b] + InlineStrings v1.4.5
⌅ [a98d9a8b] + Interpolations v0.15.1
  [8197267c] + IntervalSets v0.7.11
  [3587e190] + InverseFunctions v0.1.17
  [41ab1584] + InvertedIndices v1.3.1
  [92d709cd] + IrrationalConstants v0.2.6
  [c8e1da08] + IterTools v1.10.0
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [692b3bcd] + JLLWrappers v1.7.1
⌅ [682c06a0] + JSON v0.21.4
  [63c18a36] + KernelAbstractions v0.9.38
  [5ab0869b] + KernelDensity v0.6.10
⌅ [0b1a1467] + KrylovKit v0.9.5
  [b964fa9f] + LaTeXStrings v1.4.0
  [1d6d02ad] + LeftChildRightSiblingTrees v0.2.1
  [6fdf6af0] + LogDensityProblems v2.2.0
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [e6f89c97] + LoggingExtras v1.2.0
⌅ [c7f686f2] + MCMCChains v6.0.7
  [be115224] + MCMCDiagnosticTools v0.3.15
  [e80e1ace] + MLJModelInterface v1.12.0
  [1914dd2f] + MacroTools v0.5.16
  [128add7d] + MicroCollections v0.2.0
  [e1d29d7a] + Missings v1.2.0
  [9f975960] + MolecularEvolution v0.2.7
  [76087f3c] + NLopt v1.2.1
  [872c559c] + NNlib v0.9.31
  [c020b1a1] + NaturalSort v1.0.0
  [6fe1bfb0] + OffsetArrays v1.17.0
  [bac558e1] + OrderedCollections v1.8.1
  [90014a1f] + PDMats v0.11.36
  [65ce6f38] + PackageExtensionCompat v1.0.2
  [2412ca09] + ParameterHandling v0.5.0
  [69de0a69] + Parsers v2.8.3
  [2dfb63ee] + PooledArrays v1.4.3
  [aea7be01] + PrecompileTools v1.3.3
  [21216c6a] + Preferences v1.5.0
⌅ [08abe8d2] + PrettyTables v2.4.0
  [33c8b6b6] + ProgressLogging v0.1.5
  [92933f4c] + ProgressMeter v1.11.0
  [43287f4e] + PtrArrays v1.3.0
  [1fd47b50] + QuadGK v2.11.2
  [b3c3ace0] + RangeArrays v0.3.2
  [c84ed2f1] + Ratios v0.4.5
  [3cdcf5f2] + RecipesBase v1.3.4
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.1
  [79098fc4] + Rmath v0.9.0
  [fdea26ae] + SIMD v3.7.2
  [30f210dd] + ScientificTypesBase v3.0.0
  [7e506255] + ScopedValues v1.5.0
  [91c51154] + SentinelArrays v1.4.8
  [efcf1570] + Setfield v1.1.2
  [ce78b400] + SimpleUnPack v1.1.0
  [a2af1166] + SortingAlgorithms v1.2.2
  [276daf66] + SpecialFunctions v2.6.1
  [171d559e] + SplittablesBase v0.1.15
  [90137ffa] + StaticArrays v1.9.15
  [1e83bf80] + StaticArraysCore v1.4.4
  [64bff920] + StatisticalTraits v3.5.0
  [10745b16] + Statistics v1.11.1
  [82ae8749] + StatsAPI v1.7.1
  [2913bbd2] + StatsBase v0.34.7
  [4c63d2b9] + StatsFuns v1.5.2
  [892a3eda] + StringManipulation v0.4.1
  [354b36f9] + StringViews v1.3.5
  [fd094767] + Suppressor v0.2.8
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.1
  [5d786b92] + TerminalLoggers v0.1.7
  [3bb67fe8] + TranscodingStreams v0.11.3
  [28d57a85] + Transducers v0.4.85
  [013be700] + UnsafeAtomics v0.3.0
  [409d34a3] + VectorInterface v0.5.0
  [ea10d353] + WeakRefStrings v1.4.2
  [efce3f68] + WoodburyMatrices v1.0.0
  [76eceee3] + WorkerUtilities v1.6.1
  [f5851436] + FFTW_jll v3.3.11+0
  [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0
  [856f044c] + MKL_jll v2025.2.0+0
  [079eb43e] + NLopt_jll v2.10.0+0
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
  [f50d1b31] + Rmath_jll v0.5.1+0
  [1317d2d5] + oneTBB_jll v2022.0.0+1
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8ba89e20] + Distributed v1.11.0
  [f43a241f] + Downloads v1.7.0
  [7b1f6079] + FileWatching v1.11.0
  [9fa8497b] + Future v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [4af54fe1] + LazyArtifacts v1.11.0
  [b27032c2] + LibCURL v1.0.0
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.13.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [44cfe95a] + Pkg v1.13.0
  [de0858da] + Printf v1.11.0
  [9abbd945] + Profile v1.11.0
  [3fa0cd96] + REPL v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v1.0.0
  [9e88b42a] + Serialization v1.11.0
  [1a1011a3] + SharedArrays v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [2f01184e] + SparseArrays v1.13.0
  [f489334b] + StyledStrings v1.11.0
  [4607b0f0] + SuiteSparse
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [8dfed614] + Test v1.11.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] + LibCURL_jll v8.16.0+0
  [e37daf67] + LibGit2_jll v1.9.1+0
  [29816b5a] + LibSSH2_jll v1.11.3+1
  [14a3606d] + MozillaCACerts_jll v2025.9.9
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [05823500] + OpenLibm_jll v0.8.7+0
  [458c3c95] + OpenSSL_jll v3.5.4+0
  [efcefdf7] + PCRE2_jll v10.47.0+0
  [bea87d4a] + SuiteSparse_jll v7.10.1+0
  [83775a58] + Zlib_jll v1.3.1+2
  [3161d3a3] + Zstd_jll v1.5.7+1
  [8e850b90] + libblastrampoline_jll v5.15.0+0
  [8e850ede] + nghttp2_jll v1.67.1+0
  [3f19e933] + p7zip_jll v17.6.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 11.88s


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# Precompilation
#

Precompiling PkgEval dependencies...
Precompiling packages...
   5350.7 ms  ✓ TestEnv
  1 dependency successfully precompiled in 5 seconds. 27 already precompiled.
  1 dependency had output during precompilation:
┌ TestEnv
│  WARNING: Imported binding Operations.project_rel_path was undeclared at import time during import to TestEnv.
└  

┌ Error: Failed to use TestEnv.jl; test dependencies will not be precompiled
│   exception =
│    UndefVarError: `project_rel_path` not defined in `TestEnv`
│    Suggestion: this global was defined as `Pkg.Operations.project_rel_path` but not assigned a value.
│    Stacktrace:
│     [1] get_test_dir(ctx::Pkg.Types.Context, pkgspec::PackageSpec)
│       @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:75
│     [2] test_dir_has_project_file
│       @ ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:52 [inlined]
│     [3] maybe_gen_project_override!
│       @ ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/common.jl:83 [inlined]
│     [4] activate(pkg::String; allow_reresolve::Bool)
│       @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:12
│     [5] activate(pkg::String)
│       @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:9
│     [6] top-level scope
│       @ /PkgEval.jl/scripts/precompile.jl:24
│     [7] include(mod::Module, _path::String)
│       @ Base ./Base.jl:309
│     [8] exec_options(opts::Base.JLOptions)
│       @ Base ./client.jl:344
│     [9] _start()
│       @ Base ./client.jl:577
└ @ Main /PkgEval.jl/scripts/precompile.jl:26
Precompiling package dependencies...
Precompiling packages...
   4262.5 ms  ✓ MacroTools
   1698.1 ms  ✓ InlineStrings
    753.8 ms  ✓ Reexport
   1132.3 ms  ✓ ConstructionBase
   2096.7 ms  ✓ IrrationalConstants
    749.4 ms  ✓ DataValueInterfaces
    797.1 ms  ✓ StatsAPI
   1161.0 ms  ✓ IterTools
   1013.0 ms  ✓ IntervalSets
    823.0 ms  ✓ CEnum
   1163.4 ms  ✓ StringViews
    962.4 ms  ✓ ArgCheck
   1411.6 ms  ✓ TranscodingStreams
    995.3 ms  ✓ LaTeXStrings
   2384.5 ms  ✓ Baselet
   1260.0 ms  ✓ Statistics
    949.3 ms  ✓ StaticArraysCore
    821.3 ms  ✓ Suppressor
    814.4 ms  ✓ PtrArrays
   1164.0 ms  ✓ VectorInterface
    732.4 ms  ✓ NaturalSort
    825.5 ms  ✓ DataAPI
   3587.1 ms  ✓ UnsafeAtomics
    914.5 ms  ✓ InvertedIndices
    975.0 ms  ✓ InverseFunctions
    786.1 ms  ✓ CompositionsBase
   1127.2 ms  ✓ AbstractTrees
    838.7 ms  ✓ SimpleUnPack
   1611.9 ms  ✓ InitialValues
   1022.8 ms  ✓ AbstractFFTs
    948.4 ms  ✓ WorkerUtilities
   2184.3 ms  ✓ FillArrays
    840.6 ms  ✓ ScientificTypesBase
    908.7 ms  ✓ RangeArrays
   1359.1 ms  ✓ OrderedCollections
   1139.6 ms  ✓ HashArrayMappedTries
   1271.0 ms  ✓ ProgressLogging
   1051.9 ms  ✓ DocStringExtensions
    752.2 ms  ✓ DefineSingletons
   1615.9 ms  ✓ OffsetArrays
    740.8 ms  ✓ IteratorInterfaceExtensions
    759.8 ms  ✓ PackageExtensionCompat
   1665.2 ms  ✓ Crayons
   1090.8 ms  ✓ Requires
   1227.8 ms  ✓ SuiteSparse
   1425.1 ms  ✓ WoodburyMatrices
   2807.7 ms  ✓ SentinelArrays
   1075.3 ms  ✓ LoggingExtras
   1775.2 ms  ✓ ProgressMeter
   1133.5 ms  ✓ Compat
   1171.5 ms  ✓ Preferences
   1069.8 ms  ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt
    867.8 ms  ✓ IntervalSets → IntervalSetsRandomExt
    820.0 ms  ✓ ConstructionBase → ConstructionBaseIntervalSetsExt
   1053.0 ms  ✓ BioGenerics
   1720.7 ms  ✓ CodecZlib
   1376.0 ms  ✓ Statistics → SparseArraysExt
   1075.7 ms  ✓ IntervalSets → IntervalSetsStatisticsExt
   1306.4 ms  ✓ AliasTables
   1092.2 ms  ✓ Missings
   1017.4 ms  ✓ PooledArrays
    899.5 ms  ✓ Atomix
    887.4 ms  ✓ InverseFunctions → InverseFunctionsDatesExt
   1663.9 ms  ✓ InverseFunctions → InverseFunctionsTestExt
    790.5 ms  ✓ CompositionsBase → CompositionsBaseInverseFunctionsExt
    847.9 ms  ✓ LeftChildRightSiblingTrees
   3836.8 ms  ✓ AbstractFFTs → AbstractFFTsTestExt
   1471.7 ms  ✓ FillArrays → FillArraysSparseArraysExt
    909.3 ms  ✓ FillArrays → FillArraysStatisticsExt
    877.6 ms  ✓ StatisticalTraits
   3806.5 ms  ✓ DataStructures
    964.1 ms  ✓ ScopedValues
   1539.4 ms  ✓ LogExpFunctions
   2063.4 ms  ✓ LogDensityProblems
    754.3 ms  ✓ TableTraits
   3071.4 ms  ✓ KrylovKit
    811.2 ms  ✓ Ratios
    921.9 ms  ✓ Adapt
   1846.1 ms  ✓ PDMats
   1447.2 ms  ✓ AxisAlgorithms
    936.9 ms  ✓ ConsoleProgressMonitor
    892.1 ms  ✓ Compat → CompatLinearAlgebraExt
    895.1 ms  ✓ PrecompileTools
   1201.8 ms  ✓ JLLWrappers
   2922.2 ms  ✓ Setfield
   1682.5 ms  ✓ AxisArrays
   5294.4 ms  ✓ Accessors
   2050.2 ms  ✓ TerminalLoggers
   3099.0 ms  ✓ MLJModelInterface
   1071.4 ms  ✓ SortingAlgorithms
   2315.9 ms  ✓ QuadGK
    784.6 ms  ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt
   2056.6 ms  ✓ Tables
   1189.8 ms  ✓ ArrayInterface
   1258.0 ms  ✓ Adapt → AdaptSparseArraysExt
   1270.0 ms  ✓ GPUArraysCore
    851.1 ms  ✓ OffsetArrays → OffsetArraysAdaptExt
   1472.5 ms  ✓ FillArrays → FillArraysPDMatsExt
   2849.9 ms  ✓ ChainRulesCore
   2466.4 ms  ✓ FilePathsBase
   3699.6 ms  ✓ StringManipulation


Precompilation completed after 179.53s


################################################################################
# Testing
#

     Testing CodonMolecularEvolution
        Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function.
    Updating `/tmp/jl_I4Thll/Project.toml`
  [6511b2a3] + CodonMolecularEvolution v0.2.0
  [a93c6f00] ↑ DataFrames v1.6.1 ⇒ v1.8.1
  [c2308a5c] ↑ FASTX v2.1.3 ⇒ v2.1.7
  [9f975960] ↑ MolecularEvolution v0.1.0 ⇒ v0.2.7
  [8dfed614] ~ Test ⇒ v1.11.0
    Updating `/tmp/jl_I4Thll/Manifest.toml`
  [621f4979] + AbstractFFTs v1.5.0
  [80f14c24] + AbstractMCMC v5.9.0
  [1520ce14] + AbstractTrees v0.4.5
  [7d9f7c33] + Accessors v0.1.42
  [79e6a3ab] + Adapt v4.4.0
  [66dad0bd] + AliasTables v1.1.3
  [dce04be8] + ArgCheck v2.5.0
  [4fba245c] + ArrayInterface v7.22.0
  [a9b6321e] + Atomix v1.1.2
  [67c07d97] ↑ Automa v1.0.0 ⇒ v1.1.0
  [13072b0f] + AxisAlgorithms v1.1.0
  [39de3d68] + AxisArrays v0.4.8
  [198e06fe] + BangBang v0.4.6
  [9718e550] + Baselet v0.1.1
  [6e4b80f9] + BenchmarkTools v1.6.3
  [47718e42] ↑ BioGenerics v0.1.2 ⇒ v0.1.5
  [fa961155] + CEnum v0.5.0
  [336ed68f] + CSV v0.10.15
  [49dc2e85] - Calculus v0.5.1
  [d360d2e6] + ChainRulesCore v1.26.0
  [944b1d66] + CodecZlib v0.7.8
  [6511b2a3] + CodonMolecularEvolution v0.2.0
  [34da2185] ↑ Compat v4.9.0 ⇒ v4.18.1
  [a33af91c] + CompositionsBase v0.1.2
  [88cd18e8] + ConsoleProgressMonitor v0.1.2
  [187b0558] + ConstructionBase v1.6.0
  [9a962f9c] ↑ DataAPI v1.15.0 ⇒ v1.16.0
  [a93c6f00] ↑ DataFrames v1.6.1 ⇒ v1.8.1
  [864edb3b] ↑ DataStructures v0.18.15 ⇒ v0.19.1
  [244e2a9f] + DefineSingletons v0.1.2
  [31c24e10] ↑ Distributions v0.25.100 ⇒ v0.25.122
  [ffbed154] ↑ DocStringExtensions v0.9.3 ⇒ v0.9.5
  [fa6b7ba4] - DualNumbers v0.6.8
  [cad2338a] + EllipticalSliceSampling v2.0.0
  [c2308a5c] ↑ FASTX v2.1.3 ⇒ v2.1.7
  [7a1cc6ca] + FFTW v1.10.0
  [48062228] + FilePathsBase v0.9.24
  [1a297f60] ↑ FillArrays v1.5.0 ⇒ v1.14.0
  [46192b85] + GPUArraysCore v0.2.0
  [076d061b] + HashArrayMappedTries v0.2.0
  [34004b35] ↑ HypergeometricFunctions v0.3.23 ⇒ v0.3.28
  [22cec73e] + InitialValues v0.3.1
  [842dd82b] ↑ InlineStrings v1.4.0 ⇒ v1.4.5
⌅ [a98d9a8b] + Interpolations v0.15.1
  [8197267c] + IntervalSets v0.7.11
  [3587e190] + InverseFunctions v0.1.17
  [41ab1584] ↑ InvertedIndices v1.3.0 ⇒ v1.3.1
  [92d709cd] ↑ IrrationalConstants v0.2.2 ⇒ v0.2.6
  [c8e1da08] + IterTools v1.10.0
  [692b3bcd] ↑ JLLWrappers v1.5.0 ⇒ v1.7.1
⌅ [682c06a0] + JSON v0.21.4
  [63c18a36] + KernelAbstractions v0.9.38
  [5ab0869b] + KernelDensity v0.6.10
⌅ [0b1a1467] + KrylovKit v0.9.5
  [b964fa9f] ↑ LaTeXStrings v1.3.1 ⇒ v1.4.0
  [1d6d02ad] + LeftChildRightSiblingTrees v0.2.1
  [6fdf6af0] + LogDensityProblems v2.2.0
  [2ab3a3ac] ↑ LogExpFunctions v0.3.25 ⇒ v0.3.29
  [e6f89c97] + LoggingExtras v1.2.0
⌅ [c7f686f2] + MCMCChains v6.0.7
  [be115224] + MCMCDiagnosticTools v0.3.15
  [e80e1ace] + MLJModelInterface v1.12.0
  [1914dd2f] + MacroTools v0.5.16
  [128add7d] + MicroCollections v0.2.0
  [e1d29d7a] ↑ Missings v1.1.0 ⇒ v1.2.0
  [9f975960] ↑ MolecularEvolution v0.1.0 ⇒ v0.2.7
  [76087f3c] + NLopt v1.2.1
  [872c559c] + NNlib v0.9.31
  [77ba4419] - NaNMath v1.0.2
  [c020b1a1] + NaturalSort v1.0.0
  [6fe1bfb0] + OffsetArrays v1.17.0
  [bac558e1] ↑ OrderedCollections v1.6.2 ⇒ v1.8.1
  [90014a1f] ↑ PDMats v0.11.17 ⇒ v0.11.36
  [65ce6f38] + PackageExtensionCompat v1.0.2
  [2412ca09] + ParameterHandling v0.5.0
  [69de0a69] ↑ Parsers v2.8.1 ⇒ v2.8.3
  [aea7be01] ↑ PrecompileTools v1.1.2 ⇒ v1.3.3
  [21216c6a] ↑ Preferences v1.4.0 ⇒ v1.5.0
⌅ [08abe8d2] ↑ PrettyTables v2.3.1 ⇒ v2.4.0
  [33c8b6b6] + ProgressLogging v0.1.5
  [92933f4c] + ProgressMeter v1.11.0
  [43287f4e] + PtrArrays v1.3.0
  [1fd47b50] ↑ QuadGK v2.8.2 ⇒ v2.11.2
  [b3c3ace0] + RangeArrays v0.3.2
  [c84ed2f1] + Ratios v0.4.5
  [3cdcf5f2] + RecipesBase v1.3.4
  [ae029012] ↑ Requires v1.3.0 ⇒ v1.3.1
  [79098fc4] ↑ Rmath v0.7.1 ⇒ v0.9.0
  [fdea26ae] + SIMD v3.7.2
  [30f210dd] + ScientificTypesBase v3.0.0
  [7e506255] + ScopedValues v1.5.0
  [91c51154] ↑ SentinelArrays v1.4.1 ⇒ v1.4.8
  [efcf1570] + Setfield v1.1.2
  [ce78b400] + SimpleUnPack v1.1.0
  [a2af1166] ↑ SortingAlgorithms v1.1.1 ⇒ v1.2.2
  [276daf66] ↑ SpecialFunctions v2.3.1 ⇒ v2.6.1
  [171d559e] + SplittablesBase v0.1.15
  [90137ffa] + StaticArrays v1.9.15
  [1e83bf80] + StaticArraysCore v1.4.4
  [64bff920] + StatisticalTraits v3.5.0
  [10745b16] ↑ Statistics v1.10.0 ⇒ v1.11.1
  [82ae8749] ↑ StatsAPI v1.6.0 ⇒ v1.7.1
  [2913bbd2] ↑ StatsBase v0.34.0 ⇒ v0.34.7
  [4c63d2b9] ↑ StatsFuns v1.3.0 ⇒ v1.5.2
  [892a3eda] ↑ StringManipulation v0.3.4 ⇒ v0.4.1
  [354b36f9] ↑ StringViews v1.3.3 ⇒ v1.3.5
  [fd094767] + Suppressor v0.2.8
  [bd369af6] ↑ Tables v1.11.1 ⇒ v1.12.1
  [5d786b92] + TerminalLoggers v0.1.7
  [3bb67fe8] ↑ TranscodingStreams v0.9.13 ⇒ v0.11.3
  [28d57a85] + Transducers v0.4.85
  [013be700] + UnsafeAtomics v0.3.0
  [409d34a3] + VectorInterface v0.5.0
  [ea10d353] + WeakRefStrings v1.4.2
  [efce3f68] + WoodburyMatrices v1.0.0
  [76eceee3] + WorkerUtilities v1.6.1
  [f5851436] + FFTW_jll v3.3.11+0
  [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0
  [856f044c] + MKL_jll v2025.2.0+0
  [c8ffd9c3] - MbedTLS_jll v2.28.2+1
  [079eb43e] + NLopt_jll v2.10.0+0
  [efe28fd5] ↑ OpenSpecFun_jll v0.5.5+0 ⇒ v0.5.6+0
  [f50d1b31] ↑ Rmath_jll v0.4.0+0 ⇒ v0.5.1+0
  [1317d2d5] + oneTBB_jll v2022.0.0+1
  [0dad84c5] ↑ ArgTools v1.1.1 ⇒ v1.1.2
  [56f22d72] ~ Artifacts ⇒ v1.11.0
  [2a0f44e3] ~ Base64 ⇒ v1.11.0
  [ade2ca70] ~ Dates ⇒ v1.11.0
  [8ba89e20] + Distributed v1.11.0
  [f43a241f] ↑ Downloads v1.6.0 ⇒ v1.7.0
  [7b1f6079] ~ FileWatching ⇒ v1.11.0
  [9fa8497b] ~ Future ⇒ v1.11.0
  [b77e0a4c] ~ InteractiveUtils ⇒ v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [4af54fe1] + LazyArtifacts v1.11.0
  [b27032c2] ↑ LibCURL v0.6.4 ⇒ v1.0.0
  [76f85450] ~ LibGit2 ⇒ v1.11.0
  [8f399da3] ~ Libdl ⇒ v1.11.0
  [37e2e46d] ~ LinearAlgebra ⇒ v1.13.0
  [56ddb016] ~ Logging ⇒ v1.11.0
  [d6f4376e] ~ Markdown ⇒ v1.11.0
  [a63ad114] + Mmap v1.11.0
  [ca575930] ↑ NetworkOptions v1.2.0 ⇒ v1.3.0
  [44cfe95a] ↑ Pkg v1.10.0 ⇒ v1.13.0
  [de0858da] ~ Printf ⇒ v1.11.0
  [9abbd945] + Profile v1.11.0
  [3fa0cd96] ~ REPL ⇒ v1.11.0
  [9a3f8284] ~ Random ⇒ v1.11.0
  [ea8e919c] ↑ SHA v0.7.0 ⇒ v1.0.0
  [9e88b42a] ~ Serialization ⇒ v1.11.0
  [1a1011a3] + SharedArrays v1.11.0
  [6462fe0b] ~ Sockets ⇒ v1.11.0
  [2f01184e] ↑ SparseArrays v1.10.0 ⇒ v1.13.0
  [f489334b] + StyledStrings v1.11.0
  [8dfed614] ~ Test ⇒ v1.11.0
  [cf7118a7] ~ UUIDs ⇒ v1.11.0
  [4ec0a83e] ~ Unicode ⇒ v1.11.0
  [e66e0078] ↑ CompilerSupportLibraries_jll v1.0.5+1 ⇒ v1.3.0+1
  [deac9b47] ↑ LibCURL_jll v8.4.0+0 ⇒ v8.16.0+0
  [e37daf67] ↑ LibGit2_jll v1.6.4+0 ⇒ v1.9.1+0
  [29816b5a] ↑ LibSSH2_jll v1.11.0+1 ⇒ v1.11.3+1
  [14a3606d] ↑ MozillaCACerts_jll v2023.1.10 ⇒ v2025.9.9
  [4536629a] ↑ OpenBLAS_jll v0.3.23+2 ⇒ v0.3.29+0
  [05823500] ↑ OpenLibm_jll v0.8.1+2 ⇒ v0.8.7+0
  [458c3c95] + OpenSSL_jll v3.5.4+0
  [efcefdf7] + PCRE2_jll v10.47.0+0
  [bea87d4a] ↑ SuiteSparse_jll v7.2.1+1 ⇒ v7.10.1+0
  [83775a58] ↑ Zlib_jll v1.2.13+1 ⇒ v1.3.1+2
  [3161d3a3] + Zstd_jll v1.5.7+1
  [8e850b90] ↑ libblastrampoline_jll v5.8.0+1 ⇒ v5.15.0+0
  [8e850ede] ↑ nghttp2_jll v1.52.0+1 ⇒ v1.67.1+0
  [3f19e933] ↑ p7zip_jll v17.4.0+2 ⇒ v17.6.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`
        Test Successfully re-resolved
      Status `/tmp/jl_I4Thll/Project.toml`
  [6511b2a3] CodonMolecularEvolution v0.2.0
  [a93c6f00] DataFrames v1.8.1
  [c2308a5c] FASTX v2.1.7
  [9f975960] MolecularEvolution v0.2.7
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_I4Thll/Manifest.toml`
  [621f4979] AbstractFFTs v1.5.0
  [80f14c24] AbstractMCMC v5.9.0
  [1520ce14] AbstractTrees v0.4.5
  [7d9f7c33] Accessors v0.1.42
  [79e6a3ab] Adapt v4.4.0
  [66dad0bd] AliasTables v1.1.3
  [dce04be8] ArgCheck v2.5.0
  [4fba245c] ArrayInterface v7.22.0
  [a9b6321e] Atomix v1.1.2
  [67c07d97] Automa v1.1.0
  [13072b0f] AxisAlgorithms v1.1.0
  [39de3d68] AxisArrays v0.4.8
  [198e06fe] BangBang v0.4.6
  [9718e550] Baselet v0.1.1
  [6e4b80f9] BenchmarkTools v1.6.3
  [47718e42] BioGenerics v0.1.5
  [fa961155] CEnum v0.5.0
  [336ed68f] CSV v0.10.15
  [d360d2e6] ChainRulesCore v1.26.0
  [944b1d66] CodecZlib v0.7.8
  [6511b2a3] CodonMolecularEvolution v0.2.0
  [34da2185] Compat v4.18.1
  [a33af91c] CompositionsBase v0.1.2
  [88cd18e8] ConsoleProgressMonitor v0.1.2
  [187b0558] ConstructionBase v1.6.0
  [a8cc5b0e] Crayons v4.1.1
  [9a962f9c] DataAPI v1.16.0
  [a93c6f00] DataFrames v1.8.1
  [864edb3b] DataStructures v0.19.1
  [e2d170a0] DataValueInterfaces v1.0.0
  [244e2a9f] DefineSingletons v0.1.2
  [31c24e10] Distributions v0.25.122
  [ffbed154] DocStringExtensions v0.9.5
  [cad2338a] EllipticalSliceSampling v2.0.0
  [c2308a5c] FASTX v2.1.7
  [7a1cc6ca] FFTW v1.10.0
  [48062228] FilePathsBase v0.9.24
  [1a297f60] FillArrays v1.14.0
  [46192b85] GPUArraysCore v0.2.0
  [076d061b] HashArrayMappedTries v0.2.0
  [34004b35] HypergeometricFunctions v0.3.28
  [22cec73e] InitialValues v0.3.1
  [842dd82b] InlineStrings v1.4.5
⌅ [a98d9a8b] Interpolations v0.15.1
  [8197267c] IntervalSets v0.7.11
  [3587e190] InverseFunctions v0.1.17
  [41ab1584] InvertedIndices v1.3.1
  [92d709cd] IrrationalConstants v0.2.6
  [c8e1da08] IterTools v1.10.0
  [82899510] IteratorInterfaceExtensions v1.0.0
  [692b3bcd] JLLWrappers v1.7.1
⌅ [682c06a0] JSON v0.21.4
  [63c18a36] KernelAbstractions v0.9.38
  [5ab0869b] KernelDensity v0.6.10
⌅ [0b1a1467] KrylovKit v0.9.5
  [b964fa9f] LaTeXStrings v1.4.0
  [1d6d02ad] LeftChildRightSiblingTrees v0.2.1
  [6fdf6af0] LogDensityProblems v2.2.0
  [2ab3a3ac] LogExpFunctions v0.3.29
  [e6f89c97] LoggingExtras v1.2.0
⌅ [c7f686f2] MCMCChains v6.0.7
  [be115224] MCMCDiagnosticTools v0.3.15
  [e80e1ace] MLJModelInterface v1.12.0
  [1914dd2f] MacroTools v0.5.16
  [128add7d] MicroCollections v0.2.0
  [e1d29d7a] Missings v1.2.0
  [9f975960] MolecularEvolution v0.2.7
  [76087f3c] NLopt v1.2.1
  [872c559c] NNlib v0.9.31
  [c020b1a1] NaturalSort v1.0.0
  [6fe1bfb0] OffsetArrays v1.17.0
  [bac558e1] OrderedCollections v1.8.1
  [90014a1f] PDMats v0.11.36
  [65ce6f38] PackageExtensionCompat v1.0.2
  [2412ca09] ParameterHandling v0.5.0
  [69de0a69] Parsers v2.8.3
  [2dfb63ee] PooledArrays v1.4.3
  [aea7be01] PrecompileTools v1.3.3
  [21216c6a] Preferences v1.5.0
⌅ [08abe8d2] PrettyTables v2.4.0
  [33c8b6b6] ProgressLogging v0.1.5
  [92933f4c] ProgressMeter v1.11.0
  [43287f4e] PtrArrays v1.3.0
  [1fd47b50] QuadGK v2.11.2
  [b3c3ace0] RangeArrays v0.3.2
  [c84ed2f1] Ratios v0.4.5
  [3cdcf5f2] RecipesBase v1.3.4
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.1
  [79098fc4] Rmath v0.9.0
  [fdea26ae] SIMD v3.7.2
  [30f210dd] ScientificTypesBase v3.0.0
  [7e506255] ScopedValues v1.5.0
  [91c51154] SentinelArrays v1.4.8
  [efcf1570] Setfield v1.1.2
  [ce78b400] SimpleUnPack v1.1.0
  [a2af1166] SortingAlgorithms v1.2.2
  [276daf66] SpecialFunctions v2.6.1
  [171d559e] SplittablesBase v0.1.15
  [90137ffa] StaticArrays v1.9.15
  [1e83bf80] StaticArraysCore v1.4.4
  [64bff920] StatisticalTraits v3.5.0
  [10745b16] Statistics v1.11.1
  [82ae8749] StatsAPI v1.7.1
  [2913bbd2] StatsBase v0.34.7
  [4c63d2b9] StatsFuns v1.5.2
  [892a3eda] StringManipulation v0.4.1
  [354b36f9] StringViews v1.3.5
  [fd094767] Suppressor v0.2.8
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.12.1
  [5d786b92] TerminalLoggers v0.1.7
  [3bb67fe8] TranscodingStreams v0.11.3
  [28d57a85] Transducers v0.4.85
  [013be700] UnsafeAtomics v0.3.0
  [409d34a3] VectorInterface v0.5.0
  [ea10d353] WeakRefStrings v1.4.2
  [efce3f68] WoodburyMatrices v1.0.0
  [76eceee3] WorkerUtilities v1.6.1
  [f5851436] FFTW_jll v3.3.11+0
  [1d5cc7b8] IntelOpenMP_jll v2025.2.0+0
  [856f044c] MKL_jll v2025.2.0+0
  [079eb43e] NLopt_jll v2.10.0+0
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
  [f50d1b31] Rmath_jll v0.5.1+0
  [1317d2d5] oneTBB_jll v2022.0.0+1
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [8ba89e20] Distributed v1.11.0
  [f43a241f] Downloads v1.7.0
  [7b1f6079] FileWatching v1.11.0
  [9fa8497b] Future v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0
  [4af54fe1] LazyArtifacts v1.11.0
  [b27032c2] LibCURL v1.0.0
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.13.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [a63ad114] Mmap v1.11.0
  [ca575930] NetworkOptions v1.3.0
  [44cfe95a] Pkg v1.13.0
  [de0858da] Printf v1.11.0
  [9abbd945] Profile v1.11.0
  [3fa0cd96] REPL v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v1.0.0
  [9e88b42a] Serialization v1.11.0
  [1a1011a3] SharedArrays v1.11.0
  [6462fe0b] Sockets v1.11.0
  [2f01184e] SparseArrays v1.13.0
  [f489334b] StyledStrings v1.11.0
  [4607b0f0] SuiteSparse
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] LibCURL_jll v8.16.0+0
  [e37daf67] LibGit2_jll v1.9.1+0
  [29816b5a] LibSSH2_jll v1.11.3+1
  [14a3606d] MozillaCACerts_jll v2025.9.9
  [4536629a] OpenBLAS_jll v0.3.29+0
  [05823500] OpenLibm_jll v0.8.7+0
  [458c3c95] OpenSSL_jll v3.5.4+0
  [efcefdf7] PCRE2_jll v10.47.0+0
  [bea87d4a] SuiteSparse_jll v7.10.1+0
  [83775a58] Zlib_jll v1.3.1+2
  [3161d3a3] Zstd_jll v1.5.7+1
  [8e850b90] libblastrampoline_jll v5.15.0+0
  [8e850ede] nghttp2_jll v1.67.1+0
  [3f19e933] p7zip_jll v17.6.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
ERROR: LoadError: UndefVarError: `T` not defined in `SIMD`
Suggestion: check for spelling errors or missing imports.
Stacktrace:
  [1] top-level scope
    @ ~/.julia/packages/SIMD/UiGbs/src/arrayops.jl:4
  [2] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:310
  [3] top-level scope
    @ ~/.julia/packages/SIMD/UiGbs/src/SIMD.jl:25
  [4] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
  [5] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2817
  [6] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2576
  [7] macro expansion
    @ ./loading.jl:2504 [inlined]
  [8] macro expansion
    @ ./lock.jl:376 [inlined]
  [9] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2468
 [10] require
    @ ./loading.jl:2444 [inlined]
 [11] eval_import_path
    @ ./module.jl:36 [inlined]
 [12] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base ./module.jl:60
 [13] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr})
    @ Base ./module.jl:101
 [14] top-level scope
    @ ~/.julia/packages/Automa/EyNRt/src/Automa.jl:4
 [15] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [16] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2817
 [17] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2576
 [18] macro expansion
    @ ./loading.jl:2504 [inlined]
 [19] macro expansion
    @ ./lock.jl:376 [inlined]
 [20] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2468
 [21] require
    @ ./loading.jl:2444 [inlined]
 [22] eval_import_path
    @ ./module.jl:36 [inlined]
 [23] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base ./module.jl:60
 [24] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr})
    @ Base ./module.jl:101
 [25] top-level scope
    @ ~/.julia/packages/FASTX/KGKFv/src/FASTX.jl:4
 [26] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [27] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2817
 [28] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2576
 [29] macro expansion
    @ ./loading.jl:2504 [inlined]
 [30] macro expansion
    @ ./lock.jl:376 [inlined]
 [31] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2468
 [32] require
    @ ./loading.jl:2444 [inlined]
 [33] eval_import_path
    @ ./module.jl:36 [inlined]
 [34] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base ./module.jl:60
 [35] _eval_using(to::Module, path::Expr)
    @ Base ./module.jl:137
 [36] top-level scope
    @ ~/.julia/packages/CodonMolecularEvolution/dBmJx/test/runtests.jl:1
 [37] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:310
 [38] top-level scope
    @ none:6
 [39] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [40] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:310
 [41] _start()
    @ Base ./client.jl:577
in expression starting at /home/pkgeval/.julia/packages/SIMD/UiGbs/src/arrayops.jl:4
in expression starting at /home/pkgeval/.julia/packages/SIMD/UiGbs/src/SIMD.jl:1
in expression starting at /home/pkgeval/.julia/packages/Automa/EyNRt/src/Automa.jl:1
in expression starting at /home/pkgeval/.julia/packages/FASTX/KGKFv/src/FASTX.jl:1
in expression starting at /home/pkgeval/.julia/packages/CodonMolecularEvolution/dBmJx/test/runtests.jl:1

Testing failed after 125.84s

ERROR: LoadError: Package CodonMolecularEvolution errored during testing
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Types.jl:68
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2936
  [3] test
    @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/Operations.jl:2785 [inlined]
  [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:572
  [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:548
  [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:172
  [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:161
  [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160
  [9] test
    @ /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:160 [inlined]
 [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String)
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.14/Pkg/src/API.jl:159
 [11] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:219
 [12] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [13] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:344
 [14] _start()
    @ Base ./client.jl:577
in expression starting at /PkgEval.jl/scripts/evaluate.jl:210

PkgEval failed after 354.72s: package tests unexpectedly errored