Package evaluation to test ExactWrightFisher on Julia 1.13.0-DEV.1342 (4ff19f0352*) started at 2025-10-21T16:49:59.107


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 10.19s


################################################################################
# Installation
#

Installing ExactWrightFisher...
   Resolving package versions...
   Installed Rmath_jll ─────────────── v0.5.1+0
   Installed MacroTools ────────────── v0.5.16
   Installed FillArrays ────────────── v1.14.0
   Installed GroupsCore ────────────── v0.4.2
   Installed DataStructures ────────── v0.19.1
   Installed Arb_jll ───────────────── v200.2300.0+0
   Installed HypergeometricFunctions ─ v0.3.28
   Installed ExactWrightFisher ─────── v0.1.11
   Installed AliasTables ───────────── v1.1.3
   Installed DataAPI ───────────────── v1.16.0
   Installed OrderedCollections ────── v1.8.1
   Installed StatsBase ─────────────── v0.34.6
   Installed Statistics ────────────── v1.11.1
   Installed StatsAPI ──────────────── v1.7.1
   Installed AbstractAlgebra ───────── v0.35.3
   Installed ProgressMeter ─────────── v1.11.0
   Installed IrrationalConstants ───── v0.2.6
   Installed Antic_jll ─────────────── v0.201.500+0
   Installed FLINT_jll ─────────────── v200.900.9+0
   Installed OpenSpecFun_jll ───────── v0.5.6+0
   Installed OpenBLAS32_jll ────────── v0.3.29+0
   Installed QuadGK ────────────────── v2.11.2
   Installed LogExpFunctions ───────── v0.3.29
   Installed Rmath ─────────────────── v0.8.1
   Installed StatsFuns ─────────────── v1.5.0
   Installed Calcium_jll ───────────── v0.401.100+0
   Installed PtrArrays ─────────────── v1.3.0
   Installed Reexport ──────────────── v1.2.2
   Installed SpecialFunctions ──────── v2.6.1
   Installed Missings ──────────────── v1.2.0
   Installed JLLWrappers ───────────── v1.7.1
   Installed Distributions ─────────── v0.25.122
   Installed Preferences ───────────── v1.5.0
   Installed PDMats ────────────────── v0.11.35
   Installed DocStringExtensions ───── v0.9.5
   Installed SortingAlgorithms ─────── v1.2.2
   Installed Nemo ──────────────────── v0.39.1
   Installed RandomExtensions ──────── v0.4.4
  Installing 7 artifacts
   Installed artifact Rmath       121.9 KiB
   Installed artifact OpenSpecFun 194.9 KiB
   Installed artifact Antic       229.9 KiB
   Installed artifact Calcium     1.5 MiB
   Installed artifact Arb         6.1 MiB
   Installed artifact OpenBLAS32  10.0 MiB
   Installed artifact FLINT       13.6 MiB
    Updating `~/.julia/environments/v1.13/Project.toml`
  [8c1589a6] + ExactWrightFisher v0.1.11
    Updating `~/.julia/environments/v1.13/Manifest.toml`
⌅ [c3fe647b] + AbstractAlgebra v0.35.3
  [66dad0bd] + AliasTables v1.1.3
  [9a962f9c] + DataAPI v1.16.0
  [864edb3b] + DataStructures v0.19.1
  [31c24e10] + Distributions v0.25.122
  [ffbed154] + DocStringExtensions v0.9.5
  [8c1589a6] + ExactWrightFisher v0.1.11
  [1a297f60] + FillArrays v1.14.0
⌅ [d5909c97] + GroupsCore v0.4.2
  [34004b35] + HypergeometricFunctions v0.3.28
  [92d709cd] + IrrationalConstants v0.2.6
  [692b3bcd] + JLLWrappers v1.7.1
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [1914dd2f] + MacroTools v0.5.16
  [e1d29d7a] + Missings v1.2.0
⌅ [2edaba10] + Nemo v0.39.1
  [bac558e1] + OrderedCollections v1.8.1
  [90014a1f] + PDMats v0.11.35
  [21216c6a] + Preferences v1.5.0
  [92933f4c] + ProgressMeter v1.11.0
  [43287f4e] + PtrArrays v1.3.0
  [1fd47b50] + QuadGK v2.11.2
  [fb686558] + RandomExtensions v0.4.4
  [189a3867] + Reexport v1.2.2
  [79098fc4] + Rmath v0.8.1
  [a2af1166] + SortingAlgorithms v1.2.2
  [276daf66] + SpecialFunctions v2.6.1
  [10745b16] + Statistics v1.11.1
  [82ae8749] + StatsAPI v1.7.1
  [2913bbd2] + StatsBase v0.34.6
  [4c63d2b9] + StatsFuns v1.5.0
  [e21ec000] + Antic_jll v0.201.500+0
  [d9960996] + Arb_jll v200.2300.0+0
  [fcfa6d1b] + Calcium_jll v0.401.100+0
⌅ [e134572f] + FLINT_jll v200.900.9+0
  [656ef2d0] + OpenBLAS32_jll v0.3.29+0
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
  [f50d1b31] + Rmath_jll v0.5.1+0
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8ba89e20] + Distributed v1.11.0
  [f43a241f] + Downloads v1.7.0
  [7b1f6079] + FileWatching v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.13.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [44cfe95a] + Pkg v1.13.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [2f01184e] + SparseArrays v1.13.0
  [f489334b] + StyledStrings v1.11.0
  [4607b0f0] + SuiteSparse
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [8dfed614] + Test v1.11.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [781609d7] + GMP_jll v6.3.0+2
  [deac9b47] + LibCURL_jll v8.16.0+0
  [e37daf67] + LibGit2_jll v1.9.1+0
  [29816b5a] + LibSSH2_jll v1.11.3+1
  [3a97d323] + MPFR_jll v4.2.2+0
  [14a3606d] + MozillaCACerts_jll v2025.9.9
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [05823500] + OpenLibm_jll v0.8.7+0
  [458c3c95] + OpenSSL_jll v3.5.4+0
  [efcefdf7] + PCRE2_jll v10.46.0+0
  [bea87d4a] + SuiteSparse_jll v7.10.1+0
  [83775a58] + Zlib_jll v1.3.1+2
  [3161d3a3] + Zstd_jll v1.5.7+1
  [8e850b90] + libblastrampoline_jll v5.15.0+0
  [8e850ede] + nghttp2_jll v1.67.1+0
  [3f19e933] + p7zip_jll v17.6.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 11.66s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...
Precompiling packages...
   5395.6 ms  ✓ TestEnv
  1 dependency successfully precompiled in 6 seconds. 27 already precompiled.

Precompiling package dependencies...

Precompilation completed after 187.22s


################################################################################
# Testing
#

     Testing ExactWrightFisher
      Status `/tmp/jl_hTkh1N/Project.toml`
  [31c24e10] Distributions v0.25.122
  [8c1589a6] ExactWrightFisher v0.1.11
⌅ [2edaba10] Nemo v0.39.1
  [92933f4c] ProgressMeter v1.11.0
  [276daf66] SpecialFunctions v2.6.1
  [4c63d2b9] StatsFuns v1.5.0
  [9a3f8284] Random v1.11.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_hTkh1N/Manifest.toml`
⌅ [c3fe647b] AbstractAlgebra v0.35.3
  [66dad0bd] AliasTables v1.1.3
  [9a962f9c] DataAPI v1.16.0
  [864edb3b] DataStructures v0.19.1
  [31c24e10] Distributions v0.25.122
  [ffbed154] DocStringExtensions v0.9.5
  [8c1589a6] ExactWrightFisher v0.1.11
  [1a297f60] FillArrays v1.14.0
⌅ [d5909c97] GroupsCore v0.4.2
  [34004b35] HypergeometricFunctions v0.3.28
  [92d709cd] IrrationalConstants v0.2.6
  [692b3bcd] JLLWrappers v1.7.1
  [2ab3a3ac] LogExpFunctions v0.3.29
  [1914dd2f] MacroTools v0.5.16
  [e1d29d7a] Missings v1.2.0
⌅ [2edaba10] Nemo v0.39.1
  [bac558e1] OrderedCollections v1.8.1
  [90014a1f] PDMats v0.11.35
  [21216c6a] Preferences v1.5.0
  [92933f4c] ProgressMeter v1.11.0
  [43287f4e] PtrArrays v1.3.0
  [1fd47b50] QuadGK v2.11.2
  [fb686558] RandomExtensions v0.4.4
  [189a3867] Reexport v1.2.2
  [79098fc4] Rmath v0.8.1
  [a2af1166] SortingAlgorithms v1.2.2
  [276daf66] SpecialFunctions v2.6.1
  [10745b16] Statistics v1.11.1
  [82ae8749] StatsAPI v1.7.1
  [2913bbd2] StatsBase v0.34.6
  [4c63d2b9] StatsFuns v1.5.0
  [e21ec000] Antic_jll v0.201.500+0
  [d9960996] Arb_jll v200.2300.0+0
  [fcfa6d1b] Calcium_jll v0.401.100+0
⌅ [e134572f] FLINT_jll v200.900.9+0
  [656ef2d0] OpenBLAS32_jll v0.3.29+0
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
  [f50d1b31] Rmath_jll v0.5.1+0
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [8ba89e20] Distributed v1.11.0
  [f43a241f] Downloads v1.7.0
  [7b1f6079] FileWatching v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.13.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [ca575930] NetworkOptions v1.3.0
  [44cfe95a] Pkg v1.13.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [6462fe0b] Sockets v1.11.0
  [2f01184e] SparseArrays v1.13.0
  [f489334b] StyledStrings v1.11.0
  [4607b0f0] SuiteSparse
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.3.0+1
  [781609d7] GMP_jll v6.3.0+2
  [deac9b47] LibCURL_jll v8.16.0+0
  [e37daf67] LibGit2_jll v1.9.1+0
  [29816b5a] LibSSH2_jll v1.11.3+1
  [3a97d323] MPFR_jll v4.2.2+0
  [14a3606d] MozillaCACerts_jll v2025.9.9
  [4536629a] OpenBLAS_jll v0.3.29+0
  [05823500] OpenLibm_jll v0.8.7+0
  [458c3c95] OpenSSL_jll v3.5.4+0
  [efcefdf7] PCRE2_jll v10.46.0+0
  [bea87d4a] SuiteSparse_jll v7.10.1+0
  [83775a58] Zlib_jll v1.3.1+2
  [3161d3a3] Zstd_jll v1.5.7+1
  [8e850b90] libblastrampoline_jll v5.15.0+0
  [8e850ede] nghttp2_jll v1.67.1+0
  [3f19e933] p7zip_jll v17.6.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
Testing...
ERROR: LoadError: InitError: MethodError: no method matching process_backtrace(::Vector{Union{Ptr{Nothing}, Base.InterpreterIP}})
The function `process_backtrace` exists, but no method is defined for this combination of argument types.

Closest candidates are:
  process_backtrace(!Matched::Vector{Any})
   @ Base errorshow.jl:1097
  process_backtrace(!Matched::Vector{Base.StackTraces.StackFrame})
   @ Base errorshow.jl:1092

Stacktrace:
  [1] __init__()
    @ Nemo ~/.julia/packages/Nemo/VHAIi/src/Nemo.jl:373
  [2] run_module_init(mod::Module, i::Int64)
    @ Base ./loading.jl:1443
  [3] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String)
    @ Base ./loading.jl:1431
  [4] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}; register::Bool)
    @ Base ./loading.jl:1319
  [5] _include_from_serialized
    @ ./loading.jl:1276 [inlined]
  [6] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String})
    @ Base ./loading.jl:2151
  [7] _require_search_from_serialized
    @ ./loading.jl:2045 [inlined]
  [8] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2695
  [9] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2561
 [10] macro expansion
    @ ./loading.jl:2489 [inlined]
 [11] macro expansion
    @ ./lock.jl:376 [inlined]
 [12] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2453
 [13] require
    @ ./loading.jl:2429 [inlined]
 [14] eval_import_path
    @ ./module.jl:36 [inlined]
 [15] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base ./module.jl:60
 [16] _eval_using(to::Module, path::Expr)
    @ Base ./module.jl:137
 [17] top-level scope
    @ ~/.julia/packages/ExactWrightFisher/gYX8w/src/arb_definitions.jl:1
 [18] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:310
 [19] top-level scope
    @ ~/.julia/packages/ExactWrightFisher/gYX8w/src/ExactWrightFisher.jl:5
 [20] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [21] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2802
 [22] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2561
 [23] macro expansion
    @ ./loading.jl:2489 [inlined]
 [24] macro expansion
    @ ./lock.jl:376 [inlined]
 [25] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2453
 [26] require
    @ ./loading.jl:2429 [inlined]
 [27] eval_import_path
    @ ./module.jl:36 [inlined]
 [28] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base ./module.jl:60
 [29] _eval_using(to::Module, path::Expr)
    @ Base ./module.jl:137
 [30] top-level scope
    @ ~/.julia/packages/ExactWrightFisher/gYX8w/test/runtests.jl:4
 [31] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:310
 [32] top-level scope
    @ none:6
 [33] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [34] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:310
 [35] _start()
    @ Base ./client.jl:577
during initialization of module Nemo
in expression starting at /home/pkgeval/.julia/packages/ExactWrightFisher/gYX8w/src/arb_definitions.jl:1
in expression starting at /home/pkgeval/.julia/packages/ExactWrightFisher/gYX8w/src/ExactWrightFisher.jl:1
in expression starting at /home/pkgeval/.julia/packages/ExactWrightFisher/gYX8w/test/runtests.jl:4

Testing failed after 39.16s

ERROR: LoadError: Package ExactWrightFisher errored during testing
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2674
  [3] test
    @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2523 [inlined]
  [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:548
  [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:525
  [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:172
  [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:161
  [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:160
  [9] test
    @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:160 [inlined]
 [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String)
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:159
 [11] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:219
 [12] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [13] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:344
 [14] _start()
    @ Base ./client.jl:577
in expression starting at /PkgEval.jl/scripts/evaluate.jl:210

PkgEval failed after 266.82s: package tests unexpectedly errored