Package evaluation to test QuantumESPRESSOParser on Julia 1.13.0-DEV.1319 (9cddfda8ef*) started at 2025-10-16T17:35:43.757 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 10.88s ################################################################################ # Installation # Installing QuantumESPRESSOParser... Resolving package versions... ┌ Warning: could not download https://pkg.julialang.org/registries │ exception = RequestError: Operation too slow. Less than 1 bytes/sec transferred the last 20 seconds while requesting https://pkg.julialang.org/registries └ @ Pkg.Registry /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Registry/Registry.jl:83 Cloning [5218b696-f38b-4ac9-8b61-a12ec717816d] Configurations from https://github.com/Roger-luo/Configurations.jl.git Installed Configurations ──────── v0.17.6 Cloning [a33af91c-f02d-484b-be07-31d278c5ca2b] CompositionsBase from https://github.com/JuliaFunctional/CompositionsBase.jl.git Installed CompositionsBase ────── v0.1.2 Cloning [1914dd2f-81c6-5fcd-8719-6d5c9610ff09] MacroTools from https://github.com/FluxML/MacroTools.jl.git Installed MacroTools ──────────── v0.5.16 Cloning [81def892-9a0e-5fdd-b105-ffc91e053289] VersionParsing from https://github.com/JuliaInterop/VersionParsing.jl.git Installed VersionParsing ──────── v1.3.0 Cloning [cbbcb084-453d-4c4c-b292-e315607ba6a4] ReadableRegex from https://github.com/jkrumbiegel/ReadableRegex.jl.git Installed ReadableRegex ───────── v0.3.2 Cloning [187b0558-2788-49d3-abe0-74a17ed4e7c9] ConstructionBase from https://github.com/JuliaObjects/ConstructionBase.jl.git Installed ConstructionBase ────── v1.6.0 Cloning [da9c4bc3-91c8-4f02-8a40-6b990d2a7e0c] UnitfulEquivalences from https://github.com/sostock/UnitfulEquivalences.jl.git Installed UnitfulEquivalences ─── v0.2.0 Cloning [51b62caa-b28f-11e9-38c2-1f67cb498e05] QuantumESPRESSOBase from https://github.com/MineralsCloud/QuantumESPRESSOBase.jl.git Installed QuantumESPRESSOBase ─── v0.12.1 Cloning [bac558e1-5e72-5ebc-8fee-abe8a469f55d] OrderedCollections from https://github.com/JuliaCollections/OrderedCollections.jl.git Installed OrderedCollections ──── v1.8.1 Cloning [34da2185-b29b-5c13-b0c7-acf172513d20] Compat from https://github.com/JuliaLang/Compat.jl.git Installed Compat ──────────────── v4.18.1 Cloning [aea7be01-6a6a-4083-8856-8a6e6704d82a] PrecompileTools from https://github.com/JuliaLang/PrecompileTools.jl.git Installed PrecompileTools ─────── v1.3.3 Cloning [55351af7-c7e9-48d6-89ff-24e801d99491] ExproniconLite from https://github.com/Roger-luo/ExproniconLite.jl.git Installed ExproniconLite ──────── v0.10.14 Cloning [80545937-1184-4bc9-b283-396e91386b5c] CrystallographyCore from https://github.com/MineralsCloud/CrystallographyCore.jl.git Installed CrystallographyCore ─── v0.6.3 Cloning [69024149-9ee7-55f6-a4c4-859efe599b68] StringEncodings from https://github.com/JuliaStrings/StringEncodings.jl.git Installed StringEncodings ─────── v0.3.7 Cloning [8f4d0f93-b110-5947-807f-2305c1781a2d] Conda from https://github.com/JuliaPy/Conda.jl.git Installed Conda ───────────────── v1.10.2 Cloning [90137ffa-7385-5640-81b9-e52037218182] StaticArrays from https://github.com/JuliaArrays/StaticArrays.jl.git Installed StaticArrays ────────── v1.9.15 Cloning [a780ab42-b33a-11e9-16c1-a92d75b2a626] QuantumESPRESSOParser from https://github.com/MineralsCloud/QuantumESPRESSOParser.jl.git Installed QuantumESPRESSOParser ─ v0.5.5 Cloning [a7773ee8-282e-5fa2-be4e-bd808c38a91a] UnitfulAtomic from https://github.com/sostock/UnitfulAtomic.jl.git Installed UnitfulAtomic ───────── v1.0.0 Cloning [1e83bf80-4336-4d27-bf5d-d5a4f845583c] StaticArraysCore from https://github.com/JuliaArrays/StaticArraysCore.jl.git Installed StaticArraysCore ────── v1.4.3 Cloning [438e738f-606a-5dbb-bf0a-cddfbfd45ab0] PyCall from https://github.com/JuliaPy/PyCall.jl.git Installed PyCall ──────────────── v1.96.4 Cloning [ddb6d928-2868-570f-bddf-ab3f9cf99eb6] YAML from https://github.com/JuliaData/YAML.jl.git Installed YAML ────────────────── v0.4.14 Cloning [682c06a0-de6a-54ab-a142-c8b1cf79cde6] JSON from https://github.com/JuliaIO/JSON.jl.git Installed JSON ────────────────── v0.21.4 Cloning [93b1d1cd-a8ea-4aa5-adb1-b2407ea0ba8d] CrystallographyBase from https://github.com/MineralsCloud/CrystallographyBase.jl.git Installed CrystallographyBase ─── v0.14.3 Cloning [69de0a69-1ddd-5017-9359-2bf0b02dc9f0] Parsers from https://github.com/JuliaData/Parsers.jl.git Installed Parsers ─────────────── v2.8.3 Cloning [1986cc42-f94f-5a68-af5c-568840ba703d] Unitful from https://github.com/JuliaPhysics/Unitful.jl.git Installed Unitful ─────────────── v1.25.0 Cloning [6ec83bb0-ed9f-11e9-3b4c-2b04cb4e219c] StructEquality from https://github.com/jolin-io/StructEquality.jl.git Installed StructEquality ──────── v2.1.0 Cloning [3587e190-3f89-42d0-90ee-14403ec27112] InverseFunctions from https://github.com/JuliaMath/InverseFunctions.jl.git Installed InverseFunctions ────── v0.1.17 Cloning [189a3867-3050-52da-a836-e630ba90ab69] Reexport from https://github.com/simonster/Reexport.jl.git Installed Reexport ────────────── v1.2.2 Cloning [ceb4388c-583f-448d-bb30-00b11e8c5682] IsURL from https://github.com/zlatanvasovic/IsURL.jl.git Installed IsURL ───────────────── v0.2.0 Cloning [e44308e6-bd5b-11e9-2850-49daf8f1ec40] PyFortran90Namelists from https://github.com/singularitti/PyFortran90Namelists.jl.git Installed PyFortran90Namelists ── v0.1.0 Cloning [21216c6a-2e73-6563-6e65-726566657250] Preferences from https://github.com/JuliaPackaging/Preferences.jl.git Installed Preferences ─────────── v1.5.0 Cloning [1b8a1bdb-a29a-4350-a16c-c7e9322d6a39] AnonymousEnums from https://github.com/poncito/AnonymousEnums.jl.git Installed AnonymousEnums ──────── v0.1.1 Cloning [692b3bcd-3c85-4b1f-b108-f13ce0eb3210] JLLWrappers from https://github.com/JuliaPackaging/JLLWrappers.jl.git Installed JLLWrappers ─────────── v1.7.1 Cloning [94ce4f54-9a6c-5748-9c1c-f9c7231a4531] Libiconv_jll from https://github.com/JuliaBinaryWrappers/Libiconv_jll.jl.git Installed Libiconv_jll ────────── v1.18.0+0 Cloning [df5135bc-470e-46c6-b451-292e27ca5b84] AbInitioSoftwareBase from https://github.com/MineralsCloud/AbInitioSoftwareBase.jl.git Installed AbInitioSoftwareBase ── v0.10.1 Cloning [b5b47461-4a42-4db3-bdf2-684fadd57bc3] ComposableCommands from https://github.com/singularitti/ComposableCommands.jl.git Installed ComposableCommands ──── v0.2.0 Cloning [7d9f7c33-5ae7-4f3b-8dc6-eff91059b697] Accessors from https://github.com/JuliaObjects/Accessors.jl.git Installed Accessors ───────────── v0.1.42 Installing 1 artifacts Installed artifact Libiconv 1.9 MiB Updating `~/.julia/environments/v1.13/Project.toml` [a780ab42] + QuantumESPRESSOParser v0.5.5 Updating `~/.julia/environments/v1.13/Manifest.toml` [df5135bc] + AbInitioSoftwareBase v0.10.1 [7d9f7c33] + Accessors v0.1.42 [1b8a1bdb] + AnonymousEnums v0.1.1 [34da2185] + Compat v4.18.1 [b5b47461] + ComposableCommands v0.2.0 [a33af91c] + CompositionsBase v0.1.2 [8f4d0f93] + Conda v1.10.2 [5218b696] + Configurations v0.17.6 [187b0558] + ConstructionBase v1.6.0 [93b1d1cd] + CrystallographyBase v0.14.3 [80545937] + CrystallographyCore v0.6.3 [55351af7] + ExproniconLite v0.10.14 [3587e190] + InverseFunctions v0.1.17 [ceb4388c] + IsURL v0.2.0 [692b3bcd] + JLLWrappers v1.7.1 ⌅ [682c06a0] + JSON v0.21.4 [1914dd2f] + MacroTools v0.5.16 [bac558e1] + OrderedCollections v1.8.1 [69de0a69] + Parsers v2.8.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [438e738f] + PyCall v1.96.4 [e44308e6] + PyFortran90Namelists v0.1.0 [51b62caa] + QuantumESPRESSOBase v0.12.1 [a780ab42] + QuantumESPRESSOParser v0.5.5 [cbbcb084] + ReadableRegex v0.3.2 [189a3867] + Reexport v1.2.2 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.3 [69024149] + StringEncodings v0.3.7 [6ec83bb0] + StructEquality v2.1.0 [1986cc42] + Unitful v1.25.0 [a7773ee8] + UnitfulAtomic v1.0.0 [da9c4bc3] + UnitfulEquivalences v0.2.0 [81def892] + VersionParsing v1.3.0 [ddb6d928] + YAML v0.4.14 [94ce4f54] + Libiconv_jll v1.18.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.16.0+0 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.9.9 [4536629a] + OpenBLAS_jll v0.3.29+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [efcefdf7] + PCRE2_jll v10.46.0+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.67.1+0 [3f19e933] + p7zip_jll v17.6.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building Conda ─→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/b19db3927f0db4151cb86d073689f2428e524576/build.log` Building PyCall → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/9816a3826b0ebf49ab4926e2b18842ad8b5c8f04/build.log` Installation failed after 73.55s ERROR: LoadError: Error building `PyCall`: ┌ Info: Using the Python distribution in the Conda package by default. └ To use a different Python version, set ENV["PYTHON"]="pythoncommand" and re-run Pkg.build("PyCall"). [ Info: Downloading miniconda installer ... ERROR: LoadError: RequestError: HTTP/2 302 (Connection timed out after 30031 milliseconds) while requesting https://github.com/conda-forge/miniforge/releases/latest/download/Miniforge3-Linux-x86_64.sh Stacktrace: [1] (::Downloads.var"#26#27"{IOStream, Base.DevNull, Nothing, Vector{Pair{String, String}}, Float64, Nothing, Bool, Nothing, Bool, Nothing, String, Bool, Bool})(easy::Downloads.Curl.Easy) @ Downloads /opt/julia/share/julia/stdlib/v1.13/Downloads/src/Downloads.jl:479 [2] with_handle(f::Downloads.var"#26#27"{IOStream, Base.DevNull, Nothing, Vector{Pair{String, String}}, Float64, Nothing, Bool, Nothing, Bool, Nothing, String, Bool, Bool}, handle::Downloads.Curl.Easy) @ Downloads.Curl /opt/julia/share/julia/stdlib/v1.13/Downloads/src/Curl/Curl.jl:105 [3] #24 @ /opt/julia/share/julia/stdlib/v1.13/Downloads/src/Downloads.jl:390 [inlined] [4] arg_write(f::Downloads.var"#24#25"{Base.DevNull, Nothing, Vector{Pair{String, String}}, Float64, Nothing, Bool, Nothing, Bool, Nothing, String, Bool, Bool}, arg::IOStream) @ ArgTools /opt/julia/share/julia/stdlib/v1.13/ArgTools/src/ArgTools.jl:134 [5] #22 @ /opt/julia/share/julia/stdlib/v1.13/Downloads/src/Downloads.jl:389 [inlined] [6] arg_read @ /opt/julia/share/julia/stdlib/v1.13/ArgTools/src/ArgTools.jl:76 [inlined] [7] #request#9 @ /opt/julia/share/julia/stdlib/v1.13/Downloads/src/Downloads.jl:388 [inlined] [8] request @ /opt/julia/share/julia/stdlib/v1.13/Downloads/src/Downloads.jl:355 [inlined] [9] (::Downloads.var"#7#8"{Nothing, Vector{Pair{String, String}}, Float64, Nothing, Bool, Nothing, Nothing, String})(output::IOStream) @ Downloads /opt/julia/share/julia/stdlib/v1.13/Downloads/src/Downloads.jl:273 [10] open(f::Downloads.var"#7#8"{Nothing, Vector{Pair{String, String}}, Float64, Nothing, Bool, Nothing, Nothing, String}, args::String; kwargs::@Kwargs{write::Bool, lock::Bool}) @ Base ./io.jl:427 [11] open_nolock @ /opt/julia/share/julia/stdlib/v1.13/ArgTools/src/ArgTools.jl:35 [inlined] [12] arg_write(f::Function, arg::String) @ ArgTools /opt/julia/share/julia/stdlib/v1.13/ArgTools/src/ArgTools.jl:103 [13] #download#5 @ /opt/julia/share/julia/stdlib/v1.13/Downloads/src/Downloads.jl:272 [inlined] [14] download @ /opt/julia/share/julia/stdlib/v1.13/Downloads/src/Downloads.jl:252 [inlined] [15] _install_conda(env::String, force::Bool) @ Conda ~/.julia/packages/Conda/zReqD/src/Conda.jl:298 [16] _install_conda(env::String) @ Conda ~/.julia/packages/Conda/zReqD/src/Conda.jl:270 [17] runconda(args::Cmd, env::String) @ Conda ~/.julia/packages/Conda/zReqD/src/Conda.jl:180 [18] add(pkg::String, env::String; channel::String, satisfied_skip_solve::Bool, args::Cmd) @ Conda ~/.julia/packages/Conda/zReqD/src/Conda.jl:343 [19] add @ ~/.julia/packages/Conda/zReqD/src/Conda.jl:326 [inlined] [20] kwcall(::@NamedTuple{satisfied_skip_solve::Bool}, ::typeof(Conda.add), pkg::String) @ Conda ~/.julia/packages/Conda/zReqD/src/Conda.jl:326 [21] top-level scope @ ~/.julia/packages/PyCall/1gn3u/deps/build.jl:79 [22] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [23] top-level scope @ none:5 [24] eval(m::Module, e::Any) @ Core ./boot.jl:489 [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [26] _start() @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/PyCall/1gn3u/deps/build.jl:43 Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68 [2] (::Pkg.Operations.var"#145#146"{Bool, Pkg.Types.Context, String, PackageSpec, String})() @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:1592 [3] withenv(::Pkg.Operations.var"#145#146"{Bool, Pkg.Types.Context, String, PackageSpec, String}, ::Pair{String, String}, ::Vararg{Pair{String}}) @ Base ./env.jl:265 [4] (::Pkg.Operations.var"#208#209"{String, Pkg.Types.EnvCache, Bool, Bool, Bool, Pkg.Operations.var"#145#146"{Bool, Pkg.Types.Context, String, PackageSpec, String}, Pkg.Types.Context, PackageSpec})() @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2447 [5] with_temp_env(fn::Pkg.Operations.var"#208#209"{String, Pkg.Types.EnvCache, Bool, Bool, Bool, Pkg.Operations.var"#145#146"{Bool, Pkg.Types.Context, String, PackageSpec, String}, Pkg.Types.Context, PackageSpec}, temp_env::String) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2293 [6] (::Pkg.Operations.var"#204#205"{Dict{String, Any}, Bool, Bool, Bool, Pkg.Operations.var"#145#146"{Bool, Pkg.Types.Context, String, PackageSpec, String}, Pkg.Types.Context, PackageSpec, String, String})(tmp::String) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2406 [7] mktempdir(fn::Pkg.Operations.var"#204#205"{Dict{String, Any}, Bool, Bool, Bool, Pkg.Operations.var"#145#146"{Bool, Pkg.Types.Context, String, PackageSpec, String}, Pkg.Types.Context, PackageSpec, String, String}, parent::String; prefix::String) @ Base.Filesystem ./file.jl:936 [8] mktempdir(fn::Function, parent::String) @ Base.Filesystem ./file.jl:932 [9] #sandbox#200 @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2353 [inlined] [10] kwcall(::@NamedTuple{preferences::Dict{String, Any}, allow_reresolve::Bool}, ::typeof(Pkg.Operations.sandbox), fn::Function, ctx::Pkg.Types.Context, target::PackageSpec, sandbox_path::String, sandbox_project_override::Pkg.Types.Project) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2343 [11] build_versions(ctx::Pkg.Types.Context, uuids::Set{UUID}; verbose::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:1569 [12] build_versions @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:1481 [inlined] [13] add(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}, new_git::Set{UUID}; allow_autoprecomp::Bool, preserve::PreserveLevel, platform::Base.BinaryPlatforms.Platform, target::Symbol) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:1925 [14] add @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:1870 [inlined] [15] add(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; preserve::PreserveLevel, platform::Base.BinaryPlatforms.Platform, target::Symbol, allow_autoprecomp::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:360 [16] add(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:172 [17] add(pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:161 [18] add(pkg::PackageSpec) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:159 [19] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:112 [20] include(mod::Module, _path::String) @ Base ./Base.jl:309 [21] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [22] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:109 PkgEval skipped after 408.12s: package could not be installed