Package evaluation to test ProfileLikelihood on Julia 1.13.0-DEV.1319 (9cddfda8ef*) started at 2025-10-16T20:17:52.945 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 11.06s ################################################################################ # Installation # Installing ProfileLikelihood... Resolving package versions... Installed DiffResults ────────────────────── v1.1.0 Installed ManualMemory ───────────────────── v0.1.8 Installed CommonWorldInvalidations ───────── v1.0.0 Installed Rmath_jll ──────────────────────── v0.5.1+0 Installed MacroTools ─────────────────────── v0.5.16 Installed CommonSolve ────────────────────── v0.2.4 Installed ForwardDiff ────────────────────── v0.10.39 Installed CompositionsBase ───────────────── v0.1.2 Installed Adapt ──────────────────────────── v4.4.0 Installed FastPower ──────────────────────── v1.1.3 Installed HypergeometricFunctions ────────── v0.3.28 Installed BitTwiddlingConvenienceFunctions ─ v0.1.6 Installed ConstructionBase ───────────────── v1.6.0 Installed RuntimeGeneratedFunctions ──────── v0.5.15 Installed ChunkSplitters ─────────────────── v2.6.0 Installed SIMDTypes ──────────────────────── v0.1.0 Installed IteratorInterfaceExtensions ────── v1.0.0 Installed Compat ─────────────────────────── v4.18.1 Installed ExprTools ──────────────────────── v0.1.10 Installed StrideArraysCore ───────────────── v0.5.8 Installed ArrayInterface ─────────────────── v7.21.0 Installed SymbolicIndexingInterface ──────── v0.3.46 Installed PreallocationTools ─────────────── v0.4.34 Installed FunctionWrappersWrappers ───────── v0.1.3 Installed RecipesBase ────────────────────── v1.3.4 Installed InvertedIndices ────────────────── v1.3.1 Installed Statistics ─────────────────────── v1.11.1 Installed EnzymeCore ─────────────────────── v0.8.14 Installed SciMLOperators ─────────────────── v1.9.0 Installed ExproniconLite ─────────────────── v0.10.14 Installed PrecompileTools ────────────────── v1.3.3 Installed CpuId ──────────────────────────── v0.3.1 Installed StaticArraysCore ───────────────── v1.4.3 Installed OffsetArrays ───────────────────── v1.17.0 Installed CommonSubexpressions ───────────── v0.3.1 Installed LayoutPointers ─────────────────── v0.1.17 Installed SciMLStructures ────────────────── v1.7.0 Installed StaticArrays ───────────────────── v1.9.15 Installed ConcreteStructs ────────────────── v0.2.3 Installed GPUArraysCore ──────────────────── v0.2.0 Installed StaticArrayInterface ───────────── v1.8.0 Installed IrrationalConstants ────────────── v0.2.6 Installed Ratios ─────────────────────────── v0.4.5 Installed AxisAlgorithms ─────────────────── v1.1.0 Installed ChainRulesCore ─────────────────── v1.26.0 Installed TruncatedStacktraces ───────────── v1.4.0 Installed Contour ────────────────────────── v0.6.3 Installed CPUSummary ─────────────────────── v0.2.7 Installed NaNMath ────────────────────────── v1.1.3 Installed OpenSpecFun_jll ────────────────── v0.5.6+0 Installed SciMLPublic ────────────────────── v1.0.0 Installed Requires ───────────────────────── v1.3.1 Installed FunctionWrappers ───────────────── v1.1.3 Installed LogExpFunctions ────────────────── v0.3.29 Installed Interpolations ─────────────────── v0.15.1 Installed DiffRules ──────────────────────── v1.15.1 Installed FastClosures ───────────────────── v0.3.2 Installed Rmath ──────────────────────────── v0.8.0 Installed FiniteDiff ─────────────────────── v2.29.0 Installed SciMLBase ──────────────────────── v2.121.1 Installed FastBroadcast ──────────────────── v0.3.5 Installed IfElse ─────────────────────────── v0.1.1 Installed CloseOpenIntervals ─────────────── v0.1.13 Installed WoodburyMatrices ───────────────── v1.0.0 Installed StatsFuns ──────────────────────── v1.5.0 Installed Polyester ──────────────────────── v0.7.18 Installed MuladdMacro ────────────────────── v0.2.4 Installed EnumX ──────────────────────────── v1.0.5 Installed Reexport ───────────────────────── v1.2.2 Installed InverseFunctions ───────────────── v0.1.17 Installed SpecialFunctions ───────────────── v2.6.1 Installed DiffEqBase ─────────────────────── v6.190.2 Installed Jieko ──────────────────────────── v0.2.1 Installed Setfield ───────────────────────── v1.1.2 Installed PolygonInbounds ────────────────── v0.2.0 Installed Preferences ────────────────────── v1.5.0 Installed SimpleNonlinearSolve ───────────── v1.12.5 Installed ProfileLikelihood ──────────────── v0.4.1 Installed Static ─────────────────────────── v1.3.0 Installed TestItems ──────────────────────── v1.0.0 Installed JLLWrappers ────────────────────── v1.7.1 Installed MaybeInplace ───────────────────── v0.1.4 Installed PolyesterWeave ─────────────────── v0.2.2 Installed ThreadingUtilities ─────────────── v0.5.5 Installed RecursiveArrayTools ────────────── v3.37.1 Installed ADTypes ────────────────────────── v1.18.0 Installed Moshi ──────────────────────────── v0.3.7 Installed DocStringExtensions ────────────── v0.9.5 Installed Accessors ──────────────────────── v0.1.42 Installed DifferentiationInterface ───────── v0.6.54 Installing 2 artifacts Installed artifact Rmath 121.9 KiB Installed artifact OpenSpecFun 194.9 KiB Updating `~/.julia/environments/v1.13/Project.toml` [3fca794e] + ProfileLikelihood v0.4.1 Updating `~/.julia/environments/v1.13/Manifest.toml` [47edcb42] + ADTypes v1.18.0 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.4.0 [4fba245c] + ArrayInterface v7.21.0 [13072b0f] + AxisAlgorithms v1.1.0 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [2a0fbf3d] + CPUSummary v0.2.7 [d360d2e6] + ChainRulesCore v1.26.0 ⌅ [ae650224] + ChunkSplitters v2.6.0 [fb6a15b2] + CloseOpenIntervals v0.1.13 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [187b0558] + ConstructionBase v1.6.0 [d38c429a] + Contour v0.6.3 [adafc99b] + CpuId v0.3.1 [2b5f629d] + DiffEqBase v6.190.2 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 ⌅ [a0c0ee7d] + DifferentiationInterface v0.6.54 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.5 [f151be2c] + EnzymeCore v0.8.14 [e2ba6199] + ExprTools v0.1.10 [55351af7] + ExproniconLite v0.10.14 [7034ab61] + FastBroadcast v0.3.5 [9aa1b823] + FastClosures v0.3.2 [a4df4552] + FastPower v1.1.3 [6a86dc24] + FiniteDiff v2.29.0 ⌅ [f6369f11] + ForwardDiff v0.10.39 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 [46192b85] + GPUArraysCore v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 [615f187c] + IfElse v0.1.1 ⌅ [a98d9a8b] + Interpolations v0.15.1 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [ae98c720] + Jieko v0.2.1 [10f19ff3] + LayoutPointers v0.1.17 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [d125e4d3] + ManualMemory v0.1.8 [bb5d69b7] + MaybeInplace v0.1.4 [2e0e35c7] + Moshi v0.3.7 [46d2c3a1] + MuladdMacro v0.2.4 [77ba4419] + NaNMath v1.1.3 [6fe1bfb0] + OffsetArrays v1.17.0 [f517fe37] + Polyester v0.7.18 [1d0040c9] + PolyesterWeave v0.2.2 [e4521ec6] + PolygonInbounds v0.2.0 [d236fae5] + PreallocationTools v0.4.34 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [3fca794e] + ProfileLikelihood v0.4.1 [c84ed2f1] + Ratios v0.4.5 [3cdcf5f2] + RecipesBase v1.3.4 [731186ca] + RecursiveArrayTools v3.37.1 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [7e49a35a] + RuntimeGeneratedFunctions v0.5.15 [94e857df] + SIMDTypes v0.1.0 [0bca4576] + SciMLBase v2.121.1 [c0aeaf25] + SciMLOperators v1.9.0 [431bcebd] + SciMLPublic v1.0.0 [53ae85a6] + SciMLStructures v1.7.0 [efcf1570] + Setfield v1.1.2 ⌅ [727e6d20] + SimpleNonlinearSolve v1.12.5 [276daf66] + SpecialFunctions v2.6.1 [aedffcd0] + Static v1.3.0 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [4c63d2b9] + StatsFuns v1.5.0 [7792a7ef] + StrideArraysCore v0.5.8 [2efcf032] + SymbolicIndexingInterface v0.3.46 [1c621080] + TestItems v1.0.0 [8290d209] + ThreadingUtilities v0.5.5 [781d530d] + TruncatedStacktraces v1.4.0 [efce3f68] + WoodburyMatrices v1.0.0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 10.43s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4767.0 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:76 Precompiling package dependencies... Precompilation completed after 242.3s ################################################################################ # Testing # Testing ProfileLikelihood Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function. Updating `/tmp/jl_xaKlyT/Project.toml` [7d9f7c33] ↑ Accessors v0.1.37 ⇒ v0.1.42 [6e4b80f9] ↑ BenchmarkTools v1.5.0 ⇒ v1.6.1 ⌃ [13f3f980] ↑ CairoMakie v0.12.9 ⇒ v0.13.10 ⌅ [ae650224] ↑ ChunkSplitters v2.4.5 ⇒ v2.6.0 ⌃ [82cc6244] ↑ DataInterpolations v6.4.0 ⇒ v8.2.0 [927a84f5] ↑ DelaunayTriangulation v1.1.3 ⇒ v1.6.4 [31c24e10] ↑ Distributions v0.25.111 ⇒ v0.25.122 [6a86dc24] ↑ FiniteDiff v2.24.0 ⇒ v2.29.0 [d4f04ab7] ↑ FiniteVolumeMethod v1.1.3 ⇒ v1.1.5 ⌅ [f6369f11] ↑ ForwardDiff v0.10.36 ⇒ v0.10.39 [41ab1584] ↑ InvertedIndices v1.3.0 ⇒ v1.3.1 [b6b21f68] ↑ Ipopt v1.6.6 ⇒ v1.11.0 ⌅ [7ed4a6bd] ↑ LinearSolve v2.33.0 ⇒ v2.39.1 [bdcacae8] ↑ LoopVectorization v0.12.171 ⇒ v0.12.173 [6fe1bfb0] ↑ OffsetArrays v1.14.1 ⇒ v1.17.0 ⌅ [7f7a1694] ↑ Optimization v3.27.0 ⇒ v4.5.0 ⌃ [3e6eede4] ↑ OptimizationBBO v0.3.0 ⇒ v0.4.2 ⌃ [fd9f6733] ↑ OptimizationMOI v0.4.3 ⇒ v0.5.5 ⌃ [4e6fcdb7] ↑ OptimizationNLopt v0.2.2 ⇒ v0.3.4 ⌃ [36348300] ↑ OptimizationOptimJL v0.3.2 ⇒ v0.4.5 ⌃ [1dea7af3] ↑ OrdinaryDiffEq v6.89.0 ⇒ v6.92.0 ⌃ [d236fae5] ↑ PreallocationTools v0.4.24 ⇒ v0.4.29 ⌃ [3fca794e] + ProfileLikelihood v0.4.0 [324d217c] ↑ ReferenceTests v0.10.4 ⇒ v0.10.5 ⌅ [0bca4576] ↑ SciMLBase v2.50.5 ⇒ v2.77.2 [860ef19b] ↑ StableRNGs v1.0.2 ⇒ v1.0.3 [90137ffa] ↑ StaticArrays v1.9.7 ⇒ v1.9.15 [2913bbd2] ↑ StatsBase v0.34.3 ⇒ v0.34.6 ⌃ [2efcf032] ↑ SymbolicIndexingInterface v0.3.28 ⇒ v0.3.44 [b77e0a4c] ~ InteractiveUtils ⇒ v1.11.0 [37e2e46d] ~ LinearAlgebra ⇒ v1.13.0 [9a3f8284] ~ Random ⇒ v1.11.0 [8dfed614] ~ Test ⇒ v1.11.0 Updating `/tmp/jl_xaKlyT/Manifest.toml` [47edcb42] ↑ ADTypes v1.7.1 ⇒ v1.18.0 [7d9f7c33] ↑ Accessors v0.1.37 ⇒ v0.1.42 [79e6a3ab] ↑ Adapt v4.0.4 ⇒ v4.4.0 [35492f91] ↑ AdaptivePredicates v1.1.1 ⇒ v1.2.0 [27a7e980] ↑ Animations v0.4.1 ⇒ v0.4.2 [4fba245c] ↑ ArrayInterface v7.15.0 ⇒ v7.21.0 [4c555306] ↑ ArrayLayouts v1.10.3 ⇒ v1.12.0 [67c07d97] ↑ Automa v1.0.4 ⇒ v1.1.0 [39de3d68] ↑ AxisArrays v0.4.7 ⇒ v0.4.8 [18cc8868] + BaseDirs v1.3.2 [6e4b80f9] ↑ BenchmarkTools v1.5.0 ⇒ v1.6.1 [e2ed5e7c] ↑ Bijections v0.1.8 ⇒ v0.2.2 [8e7c35d0] ↑ BlockArrays v1.1.0 ⇒ v1.7.2 [2a0fbf3d] ↑ CPUSummary v0.2.6 ⇒ v0.2.7 [96374032] + CRlibm v1.0.2 [159f3aea] ↑ Cairo v1.1.0 ⇒ v1.1.1 ⌃ [13f3f980] ↑ CairoMakie v0.12.9 ⇒ v0.13.10 [d360d2e6] ↑ ChainRulesCore v1.24.0 ⇒ v1.26.0 ⌅ [ae650224] ↑ ChunkSplitters v2.4.5 ⇒ v2.6.0 [523fee87] ↑ CodecBzip2 v0.8.4 ⇒ v0.8.5 [944b1d66] ↑ CodecZlib v0.7.6 ⇒ v0.7.8 [a2cac450] ↑ ColorBrewer v0.4.0 ⇒ v0.4.2 [35d6a980] ↑ ColorSchemes v3.26.0 ⇒ v3.31.0 [3da002f7] ↑ ColorTypes v0.11.5 ⇒ v0.12.1 [c3611d14] ↑ ColorVectorSpace v0.10.0 ⇒ v0.11.0 [5ae59095] ↑ Colors v0.12.11 ⇒ v0.13.1 ⌅ [a80b9123] ↑ CommonMark v0.8.12 ⇒ v0.8.16 [34da2185] ↑ Compat v4.16.0 ⇒ v4.18.1 [187b0558] ↑ ConstructionBase v1.5.7 ⇒ v1.6.0 [717857b8] - DSP v0.7.9 ⌃ [82cc6244] ↑ DataInterpolations v6.4.0 ⇒ v8.2.0 ⌅ [864edb3b] ↑ DataStructures v0.18.20 ⇒ v0.18.22 [927a84f5] ↑ DelaunayTriangulation v1.1.3 ⇒ v1.6.4 [85a47980] - Dictionaries v0.4.2 ⌃ [2b5f629d] ↑ DiffEqBase v6.154.0 ⇒ v6.174.0 [459566f4] ↑ DiffEqCallbacks v3.8.0 ⇒ v4.10.1 [77a26b50] ↑ DiffEqNoiseProcess v5.23.0 ⇒ v5.24.1 ⌅ [a0c0ee7d] ↑ DifferentiationInterface v0.5.15 ⇒ v0.6.54 [8d63f2c5] + DispatchDoctor v0.4.26 [b4f34e82] ↑ Distances v0.10.11 ⇒ v0.10.12 [31c24e10] ↑ Distributions v0.25.111 ⇒ v0.25.122 [ffbed154] ↑ DocStringExtensions v0.9.3 ⇒ v0.9.5 [5b8099bc] ↑ DomainSets v0.7.14 ⇒ v0.7.16 ⌃ [7c1d4256] ↑ DynamicPolynomials v0.6.0 ⇒ v0.6.3 [06fc5a27] ↑ DynamicQuantities v0.13.2 ⇒ v1.10.0 [b7d42ee7] - Einsum v0.4.1 [4e289a0a] ↑ EnumX v1.0.4 ⇒ v1.0.5 [f151be2c] ↑ EnzymeCore v0.7.8 ⇒ v0.8.14 [429591f6] ↑ ExactPredicates v2.2.8 ⇒ v2.2.9 [d4d017d3] ↑ ExponentialUtilities v1.26.1 ⇒ v1.27.0 [55351af7] + ExproniconLite v0.10.14 [411431e0] ↑ Extents v0.1.4 ⇒ v0.1.6 [7a1cc6ca] ↑ FFTW v1.8.0 ⇒ v1.10.0 [442a2c76] + FastGaussQuadrature v1.1.0 [a4df4552] + FastPower v1.1.3 [5789e2e9] ↑ FileIO v1.16.3 ⇒ v1.17.1 [48062228] ↑ FilePathsBase v0.9.22 ⇒ v0.9.24 [1a297f60] ↑ FillArrays v1.12.0 ⇒ v1.14.0 [64ca27bc] ↑ FindFirstFunctions v1.3.0 ⇒ v1.4.2 [6a86dc24] ↑ FiniteDiff v2.24.0 ⇒ v2.29.0 [d4f04ab7] ↑ FiniteVolumeMethod v1.1.3 ⇒ v1.1.5 ⌅ [f6369f11] ↑ ForwardDiff v0.10.36 ⇒ v0.10.39 [663a7486] ↑ FreeTypeAbstraction v0.10.3 ⇒ v0.10.8 [d9f16b24] - Functors v0.4.12 [46192b85] ↑ GPUArraysCore v0.1.6 ⇒ v0.2.0 [c145ed77] ↑ GenericSchur v0.5.4 ⇒ v0.5.6 [cf35fbd7] - GeoInterface v1.3.5 [5c1252a2] ↑ GeometryBasics v0.4.11 ⇒ v0.5.10 [a2bd30eb] ↑ Graphics v1.1.2 ⇒ v1.1.3 [86223c79] ↑ Graphs v1.11.2 ⇒ v1.13.1 [3955a311] ↑ GridLayoutBase v0.11.0 ⇒ v0.11.2 [1baab800] - HybridArrays v0.4.16 [34004b35] ↑ HypergeometricFunctions v0.3.24 ⇒ v0.3.28 [2803e5a7] ↑ ImageAxes v0.6.11 ⇒ v0.6.12 [a09fc81d] ↑ ImageCore v0.10.2 ⇒ v0.10.5 [82e4d734] ↑ ImageIO v0.6.8 ⇒ v0.6.9 [bc367c6b] ↑ ImageMetadata v0.9.9 ⇒ v0.9.10 [313cdc1a] - Indexing v1.1.1 [18e54dd8] ↑ IntegerMathUtils v0.1.2 ⇒ v0.1.3 ⌃ [d1acc4aa] ↑ IntervalArithmetic v0.22.14 ⇒ v0.22.36 [8197267c] ↑ IntervalSets v0.7.10 ⇒ v0.7.11 [3587e190] ↑ InverseFunctions v0.1.16 ⇒ v0.1.17 [41ab1584] ↑ InvertedIndices v1.3.0 ⇒ v1.3.1 [b6b21f68] ↑ Ipopt v1.6.6 ⇒ v1.11.0 [92d709cd] ↑ IrrationalConstants v0.2.2 ⇒ v0.2.6 [692b3bcd] ↑ JLLWrappers v1.5.0 ⇒ v1.7.1 [0f8b85d8] + JSON3 v1.14.3 [ae98c720] + Jieko v0.2.1 [b835a17e] ↑ JpegTurbo v0.1.5 ⇒ v0.1.6 ⌅ [98e50ef6] ↑ JuliaFormatter v1.0.60 ⇒ v1.0.62 ⌃ [ccbc3e58] ↑ JumpProcesses v9.13.4 ⇒ v9.16.1 [5ab0869b] ↑ KernelDensity v0.6.9 ⇒ v0.6.10 [2c470bb0] - Kronecker v0.5.5 ⌅ [ba0b0d4f] ↑ Krylov v0.9.6 ⇒ v0.9.10 [b964fa9f] ↑ LaTeXStrings v1.3.1 ⇒ v1.4.0 [984bce1d] - LambertW v0.4.6 [23fbe1c1] ↑ Latexify v0.16.5 ⇒ v0.16.10 [5078a376] ↑ LazyArrays v2.2.0 ⇒ v2.8.0 [1d6d02ad] ↑ LeftChildRightSiblingTrees v0.2.0 ⇒ v0.2.1 [87fe0de2] + LineSearch v0.1.4 [d3d80556] ↑ LineSearches v7.3.0 ⇒ v7.4.0 [7a12625a] - LinearMaps v3.11.3 ⌅ [7ed4a6bd] ↑ LinearSolve v2.33.0 ⇒ v2.39.1 [2ab3a3ac] ↑ LogExpFunctions v0.3.28 ⇒ v0.3.29 [e6f89c97] ↑ LoggingExtras v1.0.3 ⇒ v1.2.0 [bdcacae8] ↑ LoopVectorization v0.12.171 ⇒ v0.12.173 [1914dd2f] ↑ MacroTools v0.5.13 ⇒ v0.5.16 ⌅ [ee78f7c6] ↑ Makie v0.21.9 ⇒ v0.22.10 ⌅ [20f20a25] ↑ MakieCore v0.8.6 ⇒ v0.9.5 [af67fdf4] - ManifoldDiff v0.3.11 [1cead3c2] - Manifolds v0.9.20 [3362f125] - ManifoldsBase v0.15.15 [b8f27783] ↑ MathOptInterface v1.31.2 ⇒ v1.45.0 [0a4f8689] ↑ MathTeXEngine v0.6.1 ⇒ v0.6.6 [99c1a7ee] - MatrixEquations v2.4.2 ⌃ [961ee093] ↑ ModelingToolkit v9.34.0 ⇒ v9.59.0 [2e0e35c7] + Moshi v0.3.7 ⌃ [102ac46a] ↑ MultivariatePolynomials v0.5.6 ⇒ v0.5.9 [d8a4904e] ↑ MutableArithmetics v1.4.6 ⇒ v1.6.6 [d41bc354] ↑ NLSolversBase v7.8.3 ⇒ v7.10.0 [76087f3c] ↑ NLopt v1.1.0 ⇒ v1.2.1 [77ba4419] ↑ NaNMath v1.0.2 ⇒ v1.1.3 [356022a1] - NamedDims v1.2.2 ⌃ [8913a72c] ↑ NonlinearSolve v3.14.0 ⇒ v3.15.2 [6fe1bfb0] ↑ OffsetArrays v1.14.1 ⇒ v1.17.0 [52e1d378] ↑ OpenEXR v0.3.2 ⇒ v0.3.3 [429524aa] ↑ Optim v1.9.4 ⇒ v1.13.2 ⌅ [7f7a1694] ↑ Optimization v3.27.0 ⇒ v4.5.0 ⌃ [3e6eede4] ↑ OptimizationBBO v0.3.0 ⇒ v0.4.2 ⌅ [bca83a33] ↑ OptimizationBase v1.5.0 ⇒ v2.7.0 ⌃ [fd9f6733] ↑ OptimizationMOI v0.4.3 ⇒ v0.5.5 ⌃ [4e6fcdb7] ↑ OptimizationNLopt v0.2.2 ⇒ v0.3.4 ⌃ [36348300] ↑ OptimizationOptimJL v0.3.2 ⇒ v0.4.5 [bac558e1] ↑ OrderedCollections v1.6.3 ⇒ v1.8.1 ⌃ [1dea7af3] ↑ OrdinaryDiffEq v6.89.0 ⇒ v6.92.0 ⌃ [89bda076] ↑ OrdinaryDiffEqAdamsBashforthMoulton v1.1.0 ⇒ v1.3.0 ⌃ [6ad6398a] ↑ OrdinaryDiffEqBDF v1.1.0 ⇒ v1.3.0 ⌃ [bbf590c4] ↑ OrdinaryDiffEqCore v1.3.0 ⇒ v1.26.2 ⌃ [50262376] ↑ OrdinaryDiffEqDefault v1.1.0 ⇒ v1.5.0 ⌃ [4302a76b] ↑ OrdinaryDiffEqDifferentiation v1.1.0 ⇒ v1.4.0 ⌃ [9286f039] ↑ OrdinaryDiffEqExplicitRK v1.1.0 ⇒ v1.2.0 ⌃ [e0540318] ↑ OrdinaryDiffEqExponentialRK v1.1.0 ⇒ v1.6.0 ⌃ [becaefa8] ↑ OrdinaryDiffEqExtrapolation v1.1.0 ⇒ v1.6.0 ⌃ [5960d6e9] ↑ OrdinaryDiffEqFIRK v1.1.0 ⇒ v1.9.0 ⌃ [101fe9f7] ↑ OrdinaryDiffEqFeagin v1.1.0 ⇒ v1.2.0 ⌃ [d3585ca7] ↑ OrdinaryDiffEqFunctionMap v1.1.0 ⇒ v1.3.0 ⌃ [d28bc4f8] ↑ OrdinaryDiffEqHighOrderRK v1.1.0 ⇒ v1.3.0 ⌃ [9f002381] ↑ OrdinaryDiffEqIMEXMultistep v1.1.0 ⇒ v1.5.0 ⌃ [521117fe] ↑ OrdinaryDiffEqLinear v1.1.0 ⇒ v1.4.0 ⌃ [1344f307] ↑ OrdinaryDiffEqLowOrderRK v1.1.0 ⇒ v1.4.0 ⌃ [b0944070] ↑ OrdinaryDiffEqLowStorageRK v1.2.0 ⇒ v1.4.0 ⌃ [127b3ac7] ↑ OrdinaryDiffEqNonlinearSolve v1.1.0 ⇒ v1.5.0 ⌃ [c9986a66] ↑ OrdinaryDiffEqNordsieck v1.1.0 ⇒ v1.2.0 ⌃ [5dd0a6cf] ↑ OrdinaryDiffEqPDIRK v1.1.0 ⇒ v1.4.0 ⌃ [5b33eab2] ↑ OrdinaryDiffEqPRK v1.1.0 ⇒ v1.2.0 ⌃ [04162be5] ↑ OrdinaryDiffEqQPRK v1.1.0 ⇒ v1.2.0 ⌃ [af6ede74] ↑ OrdinaryDiffEqRKN v1.1.0 ⇒ v1.3.0 ⌃ [43230ef6] ↑ OrdinaryDiffEqRosenbrock v1.1.0 ⇒ v1.8.0 ⌃ [2d112036] ↑ OrdinaryDiffEqSDIRK v1.1.0 ⇒ v1.5.0 ⌃ [669c94d9] ↑ OrdinaryDiffEqSSPRK v1.2.0 ⇒ v1.4.0 ⌃ [e3e12d00] ↑ OrdinaryDiffEqStabilizedIRK v1.1.0 ⇒ v1.4.0 ⌃ [358294b1] ↑ OrdinaryDiffEqStabilizedRK v1.1.0 ⇒ v1.3.0 ⌃ [fa646aed] ↑ OrdinaryDiffEqSymplecticRK v1.1.0 ⇒ v1.5.0 ⌃ [b1df2697] ↑ OrdinaryDiffEqTsit5 v1.1.0 ⇒ v1.3.0 ⌃ [79d7bb75] ↑ OrdinaryDiffEqVerner v1.1.0 ⇒ v1.4.0 [90014a1f] ↑ PDMats v0.11.31 ⇒ v0.11.35 [f57f5aa1] ↑ PNGFiles v0.4.3 ⇒ v0.4.4 [19eb6ba3] ↑ Packing v0.5.0 ⇒ v0.5.1 [69de0a69] ↑ Parsers v2.8.1 ⇒ v2.8.3 [995b91a9] ↑ PlotUtils v1.4.1 ⇒ v1.4.3 [e409e4f3] ↑ PoissonRandom v0.4.4 ⇒ v0.4.7 [f517fe37] ↑ Polyester v0.7.16 ⇒ v0.7.18 [f27b6e38] - Polynomials v4.0.11 ⌃ [d236fae5] ↑ PreallocationTools v0.4.24 ⇒ v0.4.29 [aea7be01] ↑ PrecompileTools v1.2.1 ⇒ v1.3.3 [21216c6a] ↑ Preferences v1.4.3 ⇒ v1.5.0 ⌅ [08abe8d2] ↑ PrettyTables v2.3.2 ⇒ v2.4.0 [27ebfcd6] ↑ Primes v0.5.6 ⇒ v0.5.7 ⌃ [3fca794e] + ProfileLikelihood v0.4.0 [33c8b6b6] ↑ ProgressLogging v0.1.4 ⇒ v0.1.5 [92933f4c] ↑ ProgressMeter v1.10.2 ⇒ v1.11.0 [43287f4e] ↑ PtrArrays v1.2.0 ⇒ v1.3.0 [4b34888f] ↑ QOI v1.0.0 ⇒ v1.0.1 [1fd47b50] ↑ QuadGK v2.10.1 ⇒ v2.11.2 [94ee1d12] - Quaternions v0.7.6 [74087812] ↑ Random123 v1.7.0 ⇒ v1.7.1 [c1ae055f] - RealDot v0.1.0 [731186ca] ↑ RecursiveArrayTools v3.27.0 ⇒ v3.37.1 [f2c3362d] ↑ RecursiveFactorization v0.2.23 ⇒ v0.2.26 [324d217c] ↑ ReferenceTests v0.10.4 ⇒ v0.10.5 [ae029012] ↑ Requires v1.3.0 ⇒ v1.3.1 [79098fc4] ↑ Rmath v0.7.1 ⇒ v0.8.0 [7e49a35a] ↑ RuntimeGeneratedFunctions v0.5.13 ⇒ v0.5.15 ⌃ [9dfe8606] + SCCNonlinearSolve v1.4.0 [fdea26ae] ↑ SIMD v3.5.0 ⇒ v3.7.2 ⌅ [0bca4576] ↑ SciMLBase v2.50.5 ⇒ v2.77.2 ⌃ [19f34311] + SciMLJacobianOperators v0.1.2 ⌅ [c0aeaf25] ↑ SciMLOperators v0.3.10 ⇒ v0.3.12 [431bcebd] + SciMLPublic v1.0.0 [53ae85a6] ↑ SciMLStructures v1.4.2 ⇒ v1.7.0 [6c6a2e73] ↑ Scratch v1.2.1 ⇒ v1.3.0 [efcf1570] ↑ Setfield v1.1.1 ⇒ v1.1.2 [65257c39] ↑ ShaderAbstractions v0.4.1 ⇒ v0.5.0 ⌅ [727e6d20] ↑ SimpleNonlinearSolve v1.12.0 ⇒ v1.12.5 [699a6c99] ↑ SimpleTraits v0.9.4 ⇒ v0.9.5 [47aef6b3] - SimpleWeightedGraphs v1.4.0 [45858cf5] ↑ Sixel v0.1.3 ⇒ v0.1.5 [a2af1166] ↑ SortingAlgorithms v1.2.1 ⇒ v1.2.2 [bd59d7e1] + SparseBandedMatrices v1.0.0 ⌅ [9f842d2f] + SparseConnectivityTracer v0.6.21 [47a9eef4] ↑ SparseDiffTools v2.20.0 ⇒ v2.26.0 [0a514795] ↑ SparseMatrixColorings v0.4.0 ⇒ v0.4.22 [e56a9233] ↑ Sparspak v0.3.9 ⇒ v0.3.14 [276daf66] ↑ SpecialFunctions v2.4.0 ⇒ v2.6.1 [860ef19b] ↑ StableRNGs v1.0.2 ⇒ v1.0.3 [cae243ae] ↑ StackViews v0.1.1 ⇒ v0.1.2 [aedffcd0] ↑ Static v1.1.1 ⇒ v1.3.0 [90137ffa] ↑ StaticArrays v1.9.7 ⇒ v1.9.15 [10745b16] ↑ Statistics v1.10.0 ⇒ v1.11.1 [82ae8749] ↑ StatsAPI v1.7.0 ⇒ v1.7.1 [2913bbd2] ↑ StatsBase v0.34.3 ⇒ v0.34.6 [4c63d2b9] ↑ StatsFuns v1.3.1 ⇒ v1.5.0 [7792a7ef] ↑ StrideArraysCore v0.5.7 ⇒ v0.5.8 [892a3eda] ↑ StringManipulation v0.3.4 ⇒ v0.4.1 [09ab397b] ↑ StructArrays v0.6.18 ⇒ v0.7.1 [856f2bd8] + StructTypes v1.11.0 [4297ee4d] - SymbolicAnalysis v0.3.0 ⌃ [2efcf032] ↑ SymbolicIndexingInterface v0.3.28 ⇒ v0.3.44 ⌃ [19f23fe9] ↑ SymbolicLimits v0.2.2 ⇒ v0.2.3 ⌅ [d1185830] ↑ SymbolicUtils v3.5.0 ⇒ v3.32.0 [0c5d862f] ↑ Symbolics v6.4.0 ⇒ v6.56.0 [bd369af6] ↑ Tables v1.12.0 ⇒ v1.12.1 [ed4db957] + TaskLocalValues v0.1.3 [8290d209] ↑ ThreadingUtilities v0.5.2 ⇒ v0.5.5 [731e570b] ↑ TiffImages v0.10.0 ⇒ v0.11.6 [a759f4b9] ↑ TimerOutputs v0.5.24 ⇒ v0.5.29 [3bb67fe8] ↑ TranscodingStreams v0.11.2 ⇒ v0.11.3 [410a4b4d] ↑ Tricks v0.1.9 ⇒ v0.1.12 [5c2747f8] ↑ URIs v1.5.1 ⇒ v1.6.1 [1986cc42] ↑ Unitful v1.21.0 ⇒ v1.25.0 [3d5dd08c] ↑ VectorizationBase v0.21.70 ⇒ v0.21.72 [33b4df10] + VectorizedRNG v0.2.25 [e3aaa7dc] + WebP v0.1.3 [6e34b625] ↑ Bzip2_jll v1.0.8+1 ⇒ v1.0.9+0 [83423d85] ↑ Cairo_jll v1.18.0+2 ⇒ v1.18.5+0 [2e619515] ↑ Expat_jll v2.6.2+0 ⇒ v2.7.1+0 ⌅ [b22a6f82] ↑ FFMPEG_jll v6.1.2+0 ⇒ v6.1.3+0 [f5851436] ↑ FFTW_jll v3.3.10+0 ⇒ v3.3.11+0 [a3f928ae] ↑ Fontconfig_jll v2.13.96+0 ⇒ v2.17.1+0 [d7e528f0] ↑ FreeType2_jll v2.13.2+0 ⇒ v2.13.4+0 [559328eb] ↑ FriBidi_jll v1.0.14+0 ⇒ v1.0.17+0 [b0724c58] + GettextRuntime_jll v0.22.4+0 [78b55507] - Gettext_jll v0.21.0+0 [61579ee1] + Ghostscript_jll v9.55.1+0 [59f7168a] + Giflib_jll v5.2.3+0 [7746bdde] ↑ Glib_jll v2.80.2+0 ⇒ v2.86.0+0 [3b182d85] ↑ Graphite2_jll v1.3.14+0 ⇒ v1.3.15+0 [2e76f6c2] ↑ HarfBuzz_jll v8.3.1+0 ⇒ v8.5.1+0 [e33a78d0] ↑ Hwloc_jll v2.11.1+0 ⇒ v2.12.2+0 [1d5cc7b8] ↑ IntelOpenMP_jll v2024.2.1+0 ⇒ v2025.2.0+0 [9cc047cb] ↑ Ipopt_jll v300.1400.1600+0 ⇒ v300.1400.1900+0 [aacddb02] ↑ JpegTurbo_jll v3.0.3+0 ⇒ v3.1.3+0 [c1c5ebd0] ↑ LAME_jll v3.100.2+0 ⇒ v3.100.3+0 [88015f11] + LERC_jll v4.0.1+0 [1d63c593] ↑ LLVMOpenMP_jll v17.0.6+0 ⇒ v18.1.8+0 [dd4b983a] ↑ LZO_jll v2.10.2+0 ⇒ v2.10.3+0 [e9f186c6] ↑ Libffi_jll v3.2.2+1 ⇒ v3.4.7+0 [d4300ac3] - Libgcrypt_jll v1.8.11+0 [7e76a0d4] + Libglvnd_jll v1.7.1+1 [7add5ba3] - Libgpg_error_jll v1.49.0+0 [94ce4f54] ↑ Libiconv_jll v1.17.0+0 ⇒ v1.18.0+0 [4b2f31a3] ↑ Libmount_jll v2.40.1+0 ⇒ v2.41.2+0 [89763e89] + Libtiff_jll v4.7.2+0 [38a345b3] ↑ Libuuid_jll v2.40.1+0 ⇒ v2.41.2+0 [d00139f3] ↑ METIS_jll v5.1.2+0 ⇒ v5.1.3+0 [856f044c] ↑ MKL_jll v2024.2.0+0 ⇒ v2025.2.0+0 [d7ed1dd3] ↑ MUMPS_seq_jll v500.700.300+0 ⇒ v500.800.100+0 [c8ffd9c3] - MbedTLS_jll v2.28.2+1 [079eb43e] ↑ NLopt_jll v2.8.0+0 ⇒ v2.10.0+0 [e7412a2a] ↑ Ogg_jll v1.3.5+1 ⇒ v1.3.6+0 [656ef2d0] ↑ OpenBLAS32_jll v0.3.24+0 ⇒ v0.3.29+0 [6cdc7f73] + OpenBLASConsistentFPCSR_jll v0.3.29+0 [efe28fd5] ↑ OpenSpecFun_jll v0.5.5+0 ⇒ v0.5.6+0 [91d4177d] ↑ Opus_jll v1.3.3+0 ⇒ v1.5.2+0 [36c8627f] ↑ Pango_jll v1.54.1+0 ⇒ v1.56.4+0 ⌅ [30392449] ↑ Pixman_jll v0.43.4+0 ⇒ v0.44.2+0 [f50d1b31] ↑ Rmath_jll v0.4.3+0 ⇒ v0.5.1+0 ⌅ [319450e9] ↑ SPRAL_jll v2024.5.8+0 ⇒ v2025.5.20+0 ⌅ [02c8fc9c] ↑ XML2_jll v2.13.3+0 ⇒ v2.13.9+0 [aed1982a] - XSLT_jll v1.1.41+0 [ffd25f8a] + XZ_jll v5.8.1+0 [4f6342f7] ↑ Xorg_libX11_jll v1.8.6+0 ⇒ v1.8.12+0 [0c0b7dd1] ↑ Xorg_libXau_jll v1.0.11+0 ⇒ v1.0.13+0 [a3789734] ↑ Xorg_libXdmcp_jll v1.1.4+0 ⇒ v1.1.6+0 [1082639a] ↑ Xorg_libXext_jll v1.3.6+0 ⇒ v1.3.7+0 [ea2f1a96] ↑ Xorg_libXrender_jll v0.9.11+0 ⇒ v0.9.12+0 [a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0 [14d82f49] - Xorg_libpthread_stubs_jll v0.1.1+0 [c7cfdc94] ↑ Xorg_libxcb_jll v1.17.0+0 ⇒ v1.17.1+0 [c5fb5394] ↑ Xorg_xtrans_jll v1.5.0+0 ⇒ v1.6.0+0 [a4ae2306] ↑ libaom_jll v3.9.0+0 ⇒ v3.13.1+0 [0ac62f75] ↑ libass_jll v0.15.2+0 ⇒ v0.17.4+0 [f638f0a6] ↑ libfdk_aac_jll v2.0.3+0 ⇒ v2.0.4+0 [b53b4c65] ↑ libpng_jll v1.6.43+1 ⇒ v1.6.50+0 [075b6546] ↑ libsixel_jll v1.10.3+0 ⇒ v1.10.5+0 [f27f6e37] ↑ libvorbis_jll v1.3.7+2 ⇒ v1.3.8+0 [c5f90fcd] + libwebp_jll v1.6.0+0 [1317d2d5] ↑ oneTBB_jll v2021.12.0+0 ⇒ v2022.0.0+0 [1270edf5] ↑ x264_jll v10164.0.0+0 ⇒ v10164.0.1+0 [dfaa095f] ↑ x265_jll v3.6.0+0 ⇒ v4.1.0+0 [0dad84c5] ↑ ArgTools v1.1.1 ⇒ v1.1.2 [56f22d72] ~ Artifacts ⇒ v1.11.0 [2a0f44e3] ~ Base64 ⇒ v1.11.0 [8bf52ea8] ~ CRC32c ⇒ v1.11.0 [ade2ca70] ~ Dates ⇒ v1.11.0 [8ba89e20] ~ Distributed ⇒ v1.11.0 [f43a241f] ↑ Downloads v1.6.0 ⇒ v1.7.0 [7b1f6079] ~ FileWatching ⇒ v1.11.0 [9fa8497b] ~ Future ⇒ v1.11.0 [b77e0a4c] ~ InteractiveUtils ⇒ v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] ~ LazyArtifacts ⇒ v1.11.0 [76f85450] ~ LibGit2 ⇒ v1.11.0 [8f399da3] ~ Libdl ⇒ v1.11.0 [37e2e46d] ~ LinearAlgebra ⇒ v1.13.0 [56ddb016] ~ Logging ⇒ v1.11.0 [d6f4376e] ~ Markdown ⇒ v1.11.0 [a63ad114] ~ Mmap ⇒ v1.11.0 [ca575930] ↑ NetworkOptions v1.2.0 ⇒ v1.3.0 [44cfe95a] ↑ Pkg v1.10.0 ⇒ v1.13.0 [de0858da] ~ Printf ⇒ v1.11.0 [9abbd945] ~ Profile ⇒ v1.11.0 [3fa0cd96] ~ REPL ⇒ v1.11.0 [9a3f8284] ~ Random ⇒ v1.11.0 [9e88b42a] ~ Serialization ⇒ v1.11.0 [1a1011a3] ~ SharedArrays ⇒ v1.11.0 [6462fe0b] ~ Sockets ⇒ v1.11.0 [2f01184e] ↑ SparseArrays v1.10.0 ⇒ v1.13.0 [f489334b] + StyledStrings v1.11.0 [8dfed614] ~ Test ⇒ v1.11.0 [cf7118a7] ~ UUIDs ⇒ v1.11.0 [4ec0a83e] ~ Unicode ⇒ v1.11.0 [e66e0078] ↑ CompilerSupportLibraries_jll v1.1.1+0 ⇒ v1.3.0+1 [deac9b47] ↑ LibCURL_jll v8.4.0+0 ⇒ v8.16.0+0 [e37daf67] ↑ LibGit2_jll v1.6.4+0 ⇒ v1.9.1+0 [29816b5a] ↑ LibSSH2_jll v1.11.0+1 ⇒ v1.11.3+1 [14a3606d] ↑ MozillaCACerts_jll v2023.1.10 ⇒ v2025.9.9 [4536629a] ↑ OpenBLAS_jll v0.3.23+4 ⇒ v0.3.29+0 [05823500] ↑ OpenLibm_jll v0.8.1+2 ⇒ v0.8.7+0 [458c3c95] ↑ OpenSSL_jll v3.0.14+0 ⇒ v3.5.4+0 [efcefdf7] ↑ PCRE2_jll v10.42.0+1 ⇒ v10.46.0+0 [bea87d4a] ↑ SuiteSparse_jll v7.2.1+1 ⇒ v7.10.1+0 [83775a58] ↑ Zlib_jll v1.2.13+1 ⇒ v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] ↑ libblastrampoline_jll v5.8.0+1 ⇒ v5.15.0+0 [8e850ede] ↑ nghttp2_jll v1.52.0+1 ⇒ v1.67.1+0 [3f19e933] ↑ p7zip_jll v17.4.0+2 ⇒ v17.6.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Test Successfully re-resolved Status `/tmp/jl_xaKlyT/Project.toml` [7d9f7c33] Accessors v0.1.42 [6e4b80f9] BenchmarkTools v1.6.1 ⌃ [13f3f980] CairoMakie v0.13.10 ⌅ [ae650224] ChunkSplitters v2.6.0 [2569d6c7] ConcreteStructs v0.2.3 [d38c429a] Contour v0.6.3 ⌃ [82cc6244] DataInterpolations v8.2.0 [927a84f5] DelaunayTriangulation v1.6.4 [31c24e10] Distributions v0.25.122 [6a86dc24] FiniteDiff v2.29.0 [d4f04ab7] FiniteVolumeMethod v1.1.5 ⌅ [f6369f11] ForwardDiff v0.10.39 [069b7b12] FunctionWrappers v1.1.3 ⌅ [a98d9a8b] Interpolations v0.15.1 [41ab1584] InvertedIndices v1.3.1 [b6b21f68] Ipopt v1.11.0 [a5e1c1ea] LatinHypercubeSampling v1.9.0 ⌅ [7ed4a6bd] LinearSolve v2.39.1 [bdcacae8] LoopVectorization v0.12.173 [a903a81a] MovingBoundaryProblems1D v1.0.3 [46d2c3a1] MuladdMacro v0.2.4 [6fe1bfb0] OffsetArrays v1.17.0 ⌅ [7f7a1694] Optimization v4.5.0 ⌃ [3e6eede4] OptimizationBBO v0.4.2 ⌃ [fd9f6733] OptimizationMOI v0.5.5 ⌃ [4e6fcdb7] OptimizationNLopt v0.3.4 ⌃ [36348300] OptimizationOptimJL v0.4.5 ⌃ [1dea7af3] OrdinaryDiffEq v6.92.0 [e4521ec6] PolygonInbounds v0.2.0 [647866c9] PolygonOps v0.1.2 ⌃ [d236fae5] PreallocationTools v0.4.29 ⌃ [3fca794e] ProfileLikelihood v0.4.0 [324d217c] ReferenceTests v0.10.5 [1bc83da4] SafeTestsets v0.1.0 ⌅ [0bca4576] SciMLBase v2.77.2 [860ef19b] StableRNGs v1.0.3 [90137ffa] StaticArrays v1.9.15 [1e83bf80] StaticArraysCore v1.4.3 [2913bbd2] StatsBase v0.34.6 [6ec83bb0] StructEquality v2.1.0 ⌃ [2efcf032] SymbolicIndexingInterface v0.3.44 [b77e0a4c] InteractiveUtils v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_xaKlyT/Manifest.toml` [47edcb42] ADTypes v1.18.0 [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.4.0 [35492f91] AdaptivePredicates v1.2.0 [66dad0bd] AliasTables v1.1.3 [27a7e980] Animations v0.4.2 [ec485272] ArnoldiMethod v0.4.0 [4fba245c] ArrayInterface v7.21.0 [4c555306] ArrayLayouts v1.12.0 [67c07d97] Automa v1.1.0 [13072b0f] AxisAlgorithms v1.1.0 [39de3d68] AxisArrays v0.4.8 [18cc8868] BaseDirs v1.3.2 [6e4b80f9] BenchmarkTools v1.6.1 [e2ed5e7c] Bijections v0.2.2 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [a134a8b2] BlackBoxOptim v0.6.3 [8e7c35d0] BlockArrays v1.7.2 [fa961155] CEnum v0.5.0 [2a0fbf3d] CPUSummary v0.2.7 [a9c8d775] CPUTime v1.0.0 [96374032] CRlibm v1.0.2 [00ebfdb7] CSTParser v3.4.3 [159f3aea] Cairo v1.1.1 ⌃ [13f3f980] CairoMakie v0.13.10 [d360d2e6] ChainRulesCore v1.26.0 ⌅ [ae650224] ChunkSplitters v2.6.0 [fb6a15b2] CloseOpenIntervals v0.1.13 [523fee87] CodecBzip2 v0.8.5 [944b1d66] CodecZlib v0.7.8 [a2cac450] ColorBrewer v0.4.2 [35d6a980] ColorSchemes v3.31.0 [3da002f7] ColorTypes v0.12.1 [c3611d14] ColorVectorSpace v0.11.0 [5ae59095] Colors v0.13.1 ⌅ [861a8166] Combinatorics v1.0.2 ⌅ [a80b9123] CommonMark v0.8.16 [38540f10] CommonSolve v0.2.4 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 [b152e2b5] CompositeTypes v0.1.4 [a33af91c] CompositionsBase v0.1.2 [2569d6c7] ConcreteStructs v0.2.3 [88cd18e8] ConsoleProgressMonitor v0.1.2 [187b0558] ConstructionBase v1.6.0 [d38c429a] Contour v0.6.3 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 ⌃ [82cc6244] DataInterpolations v8.2.0 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [ab62b9b5] DeepDiffs v1.2.0 [927a84f5] DelaunayTriangulation v1.6.4 ⌃ [2b5f629d] DiffEqBase v6.174.0 [459566f4] DiffEqCallbacks v4.10.1 [77a26b50] DiffEqNoiseProcess v5.24.1 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 ⌅ [a0c0ee7d] DifferentiationInterface v0.6.54 [8d63f2c5] DispatchDoctor v0.4.26 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.122 [ffbed154] DocStringExtensions v0.9.5 [5b8099bc] DomainSets v0.7.16 ⌃ [7c1d4256] DynamicPolynomials v0.6.3 [06fc5a27] DynamicQuantities v1.10.0 [4e289a0a] EnumX v1.0.5 [f151be2c] EnzymeCore v0.8.14 [429591f6] ExactPredicates v2.2.9 [d4d017d3] ExponentialUtilities v1.27.0 [e2ba6199] ExprTools v0.1.10 ⌅ [6b7a57c9] Expronicon v0.8.5 [55351af7] ExproniconLite v0.10.14 [411431e0] Extents v0.1.6 [7a1cc6ca] FFTW v1.10.0 [7034ab61] FastBroadcast v0.3.5 [9aa1b823] FastClosures v0.3.2 [442a2c76] FastGaussQuadrature v1.1.0 [29a986be] FastLapackInterface v2.0.4 [a4df4552] FastPower v1.1.3 [5789e2e9] FileIO v1.17.1 ⌅ [8fc22ac5] FilePaths v0.8.3 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.14.0 [64ca27bc] FindFirstFunctions v1.4.2 [6a86dc24] FiniteDiff v2.29.0 [d4f04ab7] FiniteVolumeMethod v1.1.5 [53c48c17] FixedPointNumbers v0.8.5 [1fa38f19] Format v1.3.7 ⌅ [f6369f11] ForwardDiff v0.10.39 [b38be410] FreeType v4.1.1 [663a7486] FreeTypeAbstraction v0.10.8 [069b7b12] FunctionWrappers v1.1.3 [77dc65aa] FunctionWrappersWrappers v0.1.3 [46192b85] GPUArraysCore v0.2.0 [c145ed77] GenericSchur v0.5.6 [5c1252a2] GeometryBasics v0.5.10 [c27321d9] Glob v1.3.1 [a2bd30eb] Graphics v1.1.3 [86223c79] Graphs v1.13.1 [3955a311] GridLayoutBase v0.11.2 [42e2da0e] Grisu v1.0.2 [3e5b6fbb] HostCPUFeatures v0.1.17 [34004b35] HypergeometricFunctions v0.3.28 [615f187c] IfElse v0.1.1 [2803e5a7] ImageAxes v0.6.12 [c817782e] ImageBase v0.1.7 [a09fc81d] ImageCore v0.10.5 [82e4d734] ImageIO v0.6.9 [bc367c6b] ImageMetadata v0.9.10 [9b13fd28] IndirectArrays v1.0.0 [d25df0c9] Inflate v0.1.5 [18e54dd8] IntegerMathUtils v0.1.3 ⌅ [a98d9a8b] Interpolations v0.15.1 ⌃ [d1acc4aa] IntervalArithmetic v0.22.36 [8197267c] IntervalSets v0.7.11 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [b6b21f68] Ipopt v1.11.0 [92d709cd] IrrationalConstants v0.2.6 [f1662d9f] Isoband v0.1.1 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 ⌅ [682c06a0] JSON v0.21.4 [0f8b85d8] JSON3 v1.14.3 [ae98c720] Jieko v0.2.1 [b835a17e] JpegTurbo v0.1.6 ⌅ [98e50ef6] JuliaFormatter v1.0.62 ⌃ [ccbc3e58] JumpProcesses v9.16.1 [ef3ab10e] KLU v0.6.0 [5ab0869b] KernelDensity v0.6.10 ⌅ [ba0b0d4f] Krylov v0.9.10 [5be7bae1] LBFGSB v0.4.1 [b964fa9f] LaTeXStrings v1.4.0 [23fbe1c1] Latexify v0.16.10 [a5e1c1ea] LatinHypercubeSampling v1.9.0 [10f19ff3] LayoutPointers v0.1.17 [5078a376] LazyArrays v2.8.0 [8cdb02fc] LazyModules v0.3.1 [1d6d02ad] LeftChildRightSiblingTrees v0.2.1 [87fe0de2] LineSearch v0.1.4 [d3d80556] LineSearches v7.4.0 ⌅ [7ed4a6bd] LinearSolve v2.39.1 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.2.0 [bdcacae8] LoopVectorization v0.12.173 [d8e11817] MLStyle v0.4.17 [1914dd2f] MacroTools v0.5.16 ⌅ [ee78f7c6] Makie v0.22.10 ⌅ [20f20a25] MakieCore v0.9.5 [d125e4d3] ManualMemory v0.1.8 [dbb5928d] MappedArrays v0.4.2 [b8f27783] MathOptInterface v1.45.0 [0a4f8689] MathTeXEngine v0.6.6 [bb5d69b7] MaybeInplace v0.1.4 [e1d29d7a] Missings v1.2.0 ⌃ [961ee093] ModelingToolkit v9.59.0 [e94cdb99] MosaicViews v0.3.4 [2e0e35c7] Moshi v0.3.7 [a903a81a] MovingBoundaryProblems1D v1.0.3 [46d2c3a1] MuladdMacro v0.2.4 ⌃ [102ac46a] MultivariatePolynomials v0.5.9 [d8a4904e] MutableArithmetics v1.6.6 [d41bc354] NLSolversBase v7.10.0 [76087f3c] NLopt v1.2.1 [77ba4419] NaNMath v1.1.3 [f09324ee] Netpbm v1.1.1 ⌃ [8913a72c] NonlinearSolve v3.15.2 [510215fc] Observables v0.5.5 [6fe1bfb0] OffsetArrays v1.17.0 [52e1d378] OpenEXR v0.3.3 [429524aa] Optim v1.13.2 ⌅ [7f7a1694] Optimization v4.5.0 ⌃ [3e6eede4] OptimizationBBO v0.4.2 ⌅ [bca83a33] OptimizationBase v2.7.0 ⌃ [fd9f6733] OptimizationMOI v0.5.5 ⌃ [4e6fcdb7] OptimizationNLopt v0.3.4 ⌃ [36348300] OptimizationOptimJL v0.4.5 [bac558e1] OrderedCollections v1.8.1 ⌃ [1dea7af3] OrdinaryDiffEq v6.92.0 ⌃ [89bda076] OrdinaryDiffEqAdamsBashforthMoulton v1.3.0 ⌃ [6ad6398a] OrdinaryDiffEqBDF v1.3.0 ⌃ [bbf590c4] OrdinaryDiffEqCore v1.26.2 ⌃ [50262376] OrdinaryDiffEqDefault v1.5.0 ⌃ [4302a76b] OrdinaryDiffEqDifferentiation v1.4.0 ⌃ [9286f039] OrdinaryDiffEqExplicitRK v1.2.0 ⌃ [e0540318] OrdinaryDiffEqExponentialRK v1.6.0 ⌃ [becaefa8] OrdinaryDiffEqExtrapolation v1.6.0 ⌃ [5960d6e9] OrdinaryDiffEqFIRK v1.9.0 ⌃ [101fe9f7] OrdinaryDiffEqFeagin v1.2.0 ⌃ [d3585ca7] OrdinaryDiffEqFunctionMap v1.3.0 ⌃ [d28bc4f8] OrdinaryDiffEqHighOrderRK v1.3.0 ⌃ [9f002381] OrdinaryDiffEqIMEXMultistep v1.5.0 ⌃ [521117fe] OrdinaryDiffEqLinear v1.4.0 ⌃ [1344f307] OrdinaryDiffEqLowOrderRK v1.4.0 ⌃ [b0944070] OrdinaryDiffEqLowStorageRK v1.4.0 ⌃ [127b3ac7] OrdinaryDiffEqNonlinearSolve v1.5.0 ⌃ [c9986a66] OrdinaryDiffEqNordsieck v1.2.0 ⌃ [5dd0a6cf] OrdinaryDiffEqPDIRK v1.4.0 ⌃ [5b33eab2] OrdinaryDiffEqPRK v1.2.0 ⌃ [04162be5] OrdinaryDiffEqQPRK v1.2.0 ⌃ [af6ede74] OrdinaryDiffEqRKN v1.3.0 ⌃ [43230ef6] OrdinaryDiffEqRosenbrock v1.8.0 ⌃ [2d112036] OrdinaryDiffEqSDIRK v1.5.0 ⌃ [669c94d9] OrdinaryDiffEqSSPRK v1.4.0 ⌃ [e3e12d00] OrdinaryDiffEqStabilizedIRK v1.4.0 ⌃ [358294b1] OrdinaryDiffEqStabilizedRK v1.3.0 ⌃ [fa646aed] OrdinaryDiffEqSymplecticRK v1.5.0 ⌃ [b1df2697] OrdinaryDiffEqTsit5 v1.3.0 ⌃ [79d7bb75] OrdinaryDiffEqVerner v1.4.0 [90014a1f] PDMats v0.11.35 [f57f5aa1] PNGFiles v0.4.4 [65ce6f38] PackageExtensionCompat v1.0.2 [19eb6ba3] Packing v0.5.1 [5432bcbf] PaddedViews v0.5.12 [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.3 [eebad327] PkgVersion v0.3.3 [995b91a9] PlotUtils v1.4.3 [e409e4f3] PoissonRandom v0.4.7 [f517fe37] Polyester v0.7.18 [1d0040c9] PolyesterWeave v0.2.2 [e4521ec6] PolygonInbounds v0.2.0 [647866c9] PolygonOps v0.1.2 [85a6dd25] PositiveFactorizations v0.2.4 ⌃ [d236fae5] PreallocationTools v0.4.29 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 ⌅ [08abe8d2] PrettyTables v2.4.0 [27ebfcd6] Primes v0.5.7 ⌃ [3fca794e] ProfileLikelihood v0.4.0 [33c8b6b6] ProgressLogging v0.1.5 [92933f4c] ProgressMeter v1.11.0 [43287f4e] PtrArrays v1.3.0 [4b34888f] QOI v1.0.1 [1fd47b50] QuadGK v2.11.2 [74087812] Random123 v1.7.1 [e6cf234a] RandomNumbers v1.6.0 [b3c3ace0] RangeArrays v0.3.2 [c84ed2f1] Ratios v0.4.5 [3cdcf5f2] RecipesBase v1.3.4 [731186ca] RecursiveArrayTools v3.37.1 [f2c3362d] RecursiveFactorization v0.2.26 [189a3867] Reexport 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Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Utilities: Error During Test at /home/pkgeval/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:30 Got exception outside of a @test LoadError: ParseError: # Error @ /home/pkgeval/.julia/packages/Unitful/HCJFR/src/logarithm.jl:127:5 Base. *(::MixedUnits, ::MixedUnits) = # └───────────────────────────────┘ ── extra tokens after end of expression Stacktrace: [1] top-level scope @ ~/.julia/packages/Unitful/HCJFR/src/logarithm.jl:127 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [3] top-level scope @ ~/.julia/packages/Unitful/HCJFR/src/Unitful.jl:67 [4] include(mod::Module, _path::String) @ Base ./Base.jl:309 [5] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2777 [6] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2536 [7] macro expansion @ ./loading.jl:2464 [inlined] [8] macro expansion @ ./lock.jl:376 [inlined] [9] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2428 [10] require @ ./loading.jl:2404 [inlined] [11] eval_import_path @ ./module.jl:36 [inlined] [12] _eval_import(imported::Bool, to::Module, from::Nothing, paths::Expr) @ Base ./module.jl:111 [13] top-level scope @ ~/.julia/packages/Makie/FUAHr/src/Makie.jl:49 [14] include(mod::Module, _path::String) @ Base ./Base.jl:309 [15] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2777 [16] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2536 [17] macro expansion @ ./loading.jl:2464 [inlined] [18] macro expansion @ ./lock.jl:376 [inlined] [19] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2428 [20] require @ ./loading.jl:2404 [inlined] [21] eval_import_path @ ./module.jl:36 [inlined] [22] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [23] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [24] top-level scope @ ~/.julia/packages/CairoMakie/Yu6dt/src/CairoMakie.jl:3 [25] include(mod::Module, _path::String) @ Base ./Base.jl:309 [26] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2777 [27] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2536 [28] macro expansion @ ./loading.jl:2464 [inlined] [29] macro expansion @ ./lock.jl:376 [inlined] [30] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2428 [31] require @ ./loading.jl:2404 [inlined] [32] eval_import_path @ ./module.jl:36 [inlined] [33] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [34] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [35] top-level scope @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/utils.jl:4 [36] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [37] top-level scope @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:7 [38] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1961 [inlined] [39] macro expansion @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/runtests.jl:7 [inlined] [40] eval(m::Module, e::Any) @ Core ./boot.jl:489 [41] top-level scope @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/runtests.jl:6 [42] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1961 [inlined] [43] macro expansion @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/runtests.jl:6 [inlined] [44] macro expansion @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 [inlined] [45] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [46] top-level scope @ none:6 [47] eval(m::Module, e::Any) @ Core ./boot.jl:489 [48] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [49] _start() @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/Unitful/HCJFR/src/logarithm.jl:127 in expression starting at /home/pkgeval/.julia/packages/Unitful/HCJFR/src/Unitful.jl:1 in expression starting at /home/pkgeval/.julia/packages/Makie/FUAHr/src/Makie.jl:1 in expression starting at /home/pkgeval/.julia/packages/CairoMakie/Yu6dt/src/CairoMakie.jl:1 in expression starting at /home/pkgeval/.julia/packages/ProfileLikelihood/IKzxN/test/utils.jl:4 ┌ Warning: The use of keyword arguments `syms`, `paramsyms` and `indepsym` for `SciMLFunction`s is deprecated. Pass `sys = SymbolCache(syms, paramsyms, indepsym)` instead. │ caller = ip:0x0 └ @ Core :-1 LikelihoodProblem: Error During Test at /home/pkgeval/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:30 Got exception outside of a @test LoadError: UndefVarError: `MKL_jll` not defined in `LinearSolve` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] top-level scope @ ~/.julia/packages/LinearSolve/0IaBT/src/mkl.jl:11 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [3] top-level scope @ ~/.julia/packages/LinearSolve/0IaBT/src/LinearSolve.jl:132 [4] include(mod::Module, _path::String) @ Base ./Base.jl:309 [5] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2777 [6] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2536 [7] macro expansion @ ./loading.jl:2464 [inlined] [8] macro expansion @ ./lock.jl:376 [inlined] [9] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2428 [10] require @ ./loading.jl:2404 [inlined] [11] eval_import_path @ ./module.jl:36 [inlined] [12] _eval_import(imported::Bool, to::Module, from::Nothing, paths::Expr) @ Base ./module.jl:111 [13] top-level scope @ ~/.julia/packages/OrdinaryDiffEqDifferentiation/6Bzim/src/OrdinaryDiffEqDifferentiation.jl:11 [14] include(mod::Module, _path::String) @ Base ./Base.jl:309 [15] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2777 [16] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2536 [17] macro expansion @ ./loading.jl:2464 [inlined] [18] macro expansion @ ./lock.jl:376 [inlined] [19] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2428 [20] require @ ./loading.jl:2404 [inlined] [21] eval_import_path @ ./module.jl:36 [inlined] [22] _eval_import(imported::Bool, to::Module, from::Nothing, paths::Expr) @ Base ./module.jl:111 [23] top-level scope @ ~/.julia/packages/OrdinaryDiffEq/lkUcI/src/OrdinaryDiffEq.jl:68 [24] include(mod::Module, _path::String) @ Base ./Base.jl:309 [25] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2777 [26] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2536 [27] macro expansion @ ./loading.jl:2464 [inlined] [28] macro expansion @ ./lock.jl:376 [inlined] [29] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2428 [30] require @ ./loading.jl:2404 [inlined] [31] eval_import_path @ ./module.jl:36 [inlined] [32] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [33] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [34] top-level scope @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/likelihood_problem.jl:3 [35] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [36] top-level scope @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:13 [37] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1961 [inlined] [38] macro expansion @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/runtests.jl:13 [inlined] [39] eval(m::Module, e::Any) @ Core ./boot.jl:489 [40] top-level scope @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/runtests.jl:6 [41] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1961 [inlined] [42] macro expansion @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/runtests.jl:12 [inlined] [43] macro expansion @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 [inlined] [44] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [45] top-level scope @ none:6 [46] eval(m::Module, e::Any) @ Core ./boot.jl:489 [47] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [48] _start() @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/LinearSolve/0IaBT/src/mkl.jl:11 in expression starting at /home/pkgeval/.julia/packages/LinearSolve/0IaBT/src/LinearSolve.jl:1 in expression starting at /home/pkgeval/.julia/packages/OrdinaryDiffEqDifferentiation/6Bzim/src/OrdinaryDiffEqDifferentiation.jl:1 in expression starting at /home/pkgeval/.julia/packages/OrdinaryDiffEq/lkUcI/src/OrdinaryDiffEq.jl:1 in expression starting at /home/pkgeval/.julia/packages/ProfileLikelihood/IKzxN/test/likelihood_problem.jl:3 ┌ Warning: The interval is not an enclosing interval (does not contain a root). Returning boundary value. └ @ SimpleNonlinearSolve ~/.julia/packages/SimpleNonlinearSolve/CaKd0/src/bracketing/itp.jl:80 ┌ Warning: The interval is not an enclosing interval (does not contain a root). Returning boundary value. └ @ SimpleNonlinearSolve ~/.julia/packages/SimpleNonlinearSolve/CaKd0/src/bracketing/itp.jl:80 Check we can use multiple algorithms: Error During Test at /home/pkgeval/.julia/packages/ProfileLikelihood/IKzxN/test/mle.jl:41 Test threw exception Expression: ProfileLikelihood._get_optimiser(sol) == sol.optimiser[var"end"] == NLopt.LN_NELDERMEAD UndefVarError: `_get_optimiser` not defined in `ProfileLikelihood` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] getproperty(x::Module, f::Symbol) @ Base ./Base_compiler.jl:50 [2] top-level scope @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/mle.jl:22 [3] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1961 [inlined] [4] macro expansion @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/mle.jl:41 [inlined] [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:750 [inlined] Check we can use multiple algorithms: Error During Test at /home/pkgeval/.julia/packages/ProfileLikelihood/IKzxN/test/mle.jl:49 Test threw exception Expression: ProfileLikelihood._get_optimiser(sol) == sol.optimiser[var"end"] == NLopt.LN_BOBYQA UndefVarError: `_get_optimiser` not defined in `ProfileLikelihood` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] getproperty(x::Module, f::Symbol) @ Base ./Base_compiler.jl:50 [2] top-level scope @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/mle.jl:22 [3] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1961 [inlined] [4] macro expansion @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/mle.jl:49 [inlined] [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:750 [inlined] Logistic: Error During Test at /home/pkgeval/.julia/packages/ProfileLikelihood/IKzxN/test/grid_search.jl:442 Got exception outside of a @test UndefVarError: `Tsit5` not defined in `Main.var"##GridSearch#147"` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] top-level scope @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/grid_search.jl:380 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1961 [inlined] [3] macro expansion @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/grid_search.jl:443 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1961 [inlined] [5] macro expansion @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/grid_search.jl:472 [inlined] [6] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [7] top-level scope @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 [8] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1961 [inlined] [9] macro expansion @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/runtests.jl:28 [inlined] [10] eval(m::Module, e::Any) @ Core ./boot.jl:489 [11] top-level scope @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/runtests.jl:6 [12] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1961 [inlined] [13] macro expansion @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/runtests.jl:27 [inlined] [14] macro expansion @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 [inlined] [15] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [16] top-level scope @ none:6 [17] eval(m::Module, e::Any) @ Core ./boot.jl:489 [18] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [19] _start() @ Base ./client.jl:577 Test that resolution is being correctly applied: Error During Test at /home/pkgeval/.julia/packages/ProfileLikelihood/IKzxN/test/profile_likelihood.jl:405 Got exception outside of a @test UndefRefError: access to undefined reference Stacktrace: [1] getindex @ ./essentials.jl:965 [inlined] [2] macro expansion @ ./multidimensional.jl:1009 [inlined] [3] macro expansion @ ./cartesian.jl:65 [inlined] [4] _unsafe_getindex! @ ./multidimensional.jl:1007 [inlined] [5] _unsafe_getindex @ ./multidimensional.jl:998 [inlined] [6] _getindex @ ./multidimensional.jl:984 [inlined] [7] getindex @ ./abstractarray.jl:1360 [inlined] [8] permute!(v::Vector{Vector{Float64}}, p::Vector{Int64}) @ Base ./combinatorics.jl:214 [9] _sort_results! @ ~/.julia/packages/ProfileLikelihood/tckDY/src/profile_likelihood.jl:628 [inlined] [10] combine_and_clean_results!(left_profile_vals::Vector{Float64}, right_profile_vals::Vector{Float64}, left_param_vals::Vector{Float64}, right_param_vals::Vector{Float64}, left_other_mles::Vector{Vector{Float64}}, right_other_mles::Vector{Vector{Float64}}, combined_profiles::Vector{Float64}, combined_param_vals::Vector{Float64}, combined_other_mles::Vector{Vector{Float64}}) @ ProfileLikelihood ~/.julia/packages/ProfileLikelihood/tckDY/src/profile_likelihood.jl:648 [11] profile_single_parameter!(θ::Dict{Int64, Vector{Float64}}, prof::Dict{Int64, Vector{Float64}}, other_mles::Dict{Int64, Vector{Vector{Float64}}}, splines::Dict{Int64, Interpolations.Extrapolation{Float64, 1, Interpolations.MonotonicInterpolation{Float64, Float64, Float64, Float64, Float64, Interpolations.FritschCarlsonMonotonicInterpolation, Vector{Float64}, Vector{Float64}}, Union{Interpolations.FritschCarlsonMonotonicInterpolation, Interpolations.NoInterp, Tuple{Vararg{Union{Interpolations.FritschCarlsonMonotonicInterpolation, Interpolations.NoInterp}}}}, Interpolations.Line{Nothing}}}, confidence_intervals::Dict{Int64, ProfileLikelihood.ConfidenceInterval{Float64, Float64}}, n::Int64, num_params::Int64, param_ranges::Vector{Tuple{LinRange{Float64, Int64}, LinRange{Float64, Int64}}}, mles::Vector{Float64}, shifted_opt_prob::SciMLBase.OptimizationProblem{true, SciMLBase.OptimizationFunction{true, ADTypes.AutoForwardDiff{nothing, Nothing}, ProfileLikelihood.var"#shift_objective_function##0#shift_objective_function##1"{Float64, ProfileLikelihood.var"#negate_loglik##0#negate_loglik##1"{Main.var"##ProfileLikelihood#149".var"#loglik_fnc#loglik_fnc##5"}}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, typeof(SciMLBase.DEFAULT_OBSERVED_NO_TIME), Nothing, Nothing, SymbolicIndexingInterface.SymbolCache{Dict{Symbol, Int64}, Nothing, Nothing, Nothing, Dict{Symbol, Float64}}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing}, Vector{Float64}, Tuple{Vector{Float64}, Matrix{Float64}, PreallocationTools.DiffCache{Vector{Float64}, Vector{Float64}}, Int64, PreallocationTools.DiffCache{Vector{Float64}, Vector{Float64}}}, Vector{Float64}, Vector{Float64}, Nothing, Nothing, Nothing, Nothing, @Kwargs{}}, alg::Optim.Fminbox{Optim.LBFGS{Nothing, LineSearches.InitialStatic{Float64}, LineSearches.HagerZhang{Float64, Base.RefValue{Bool}}, Returns{Nothing}}, Float64, Optim.var"#Fminbox##0#Fminbox##1"}, ℓmax::Float64, normalise::Bool, threshold::Float64, min_steps::Int64, spline_alg::Val{Interpolations.FritschCarlsonMonotonicInterpolation}, extrap::Type, confidence_interval_method::Val{:spline}, conf_level::Float64; min_steps_fallback::Val{:replace}, next_initial_estimate_method::Val{:prev}, parallel::Val{false}, kwargs::@Kwargs{}) @ ProfileLikelihood ~/.julia/packages/ProfileLikelihood/tckDY/src/profile_likelihood.jl:263 [12] kwcall(::@NamedTuple{next_initial_estimate_method::Val{:prev}, min_steps_fallback::Val{:replace}, parallel::Val{false}}, ::typeof(ProfileLikelihood.profile_single_parameter!), θ::Dict{Int64, Vector{Float64}}, prof::Dict{Int64, Vector{Float64}}, other_mles::Dict{Int64, Vector{Vector{Float64}}}, splines::Dict{Int64, Interpolations.Extrapolation{Float64, 1, Interpolations.MonotonicInterpolation{Float64, Float64, Float64, Float64, Float64, Interpolations.FritschCarlsonMonotonicInterpolation, Vector{Float64}, Vector{Float64}}, Union{Interpolations.FritschCarlsonMonotonicInterpolation, Interpolations.NoInterp, Tuple{Vararg{Union{Interpolations.FritschCarlsonMonotonicInterpolation, Interpolations.NoInterp}}}}, Interpolations.Line{Nothing}}}, confidence_intervals::Dict{Int64, ProfileLikelihood.ConfidenceInterval{Float64, Float64}}, n::Int64, num_params::Int64, param_ranges::Vector{Tuple{LinRange{Float64, Int64}, LinRange{Float64, Int64}}}, mles::Vector{Float64}, shifted_opt_prob::SciMLBase.OptimizationProblem{true, SciMLBase.OptimizationFunction{true, ADTypes.AutoForwardDiff{nothing, Nothing}, ProfileLikelihood.var"#shift_objective_function##0#shift_objective_function##1"{Float64, ProfileLikelihood.var"#negate_loglik##0#negate_loglik##1"{Main.var"##ProfileLikelihood#149".var"#loglik_fnc#loglik_fnc##5"}}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, typeof(SciMLBase.DEFAULT_OBSERVED_NO_TIME), Nothing, Nothing, SymbolicIndexingInterface.SymbolCache{Dict{Symbol, Int64}, Nothing, Nothing, Nothing, Dict{Symbol, Float64}}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing}, Vector{Float64}, Tuple{Vector{Float64}, Matrix{Float64}, PreallocationTools.DiffCache{Vector{Float64}, Vector{Float64}}, Int64, PreallocationTools.DiffCache{Vector{Float64}, Vector{Float64}}}, Vector{Float64}, Vector{Float64}, Nothing, Nothing, Nothing, Nothing, @Kwargs{}}, alg::Optim.Fminbox{Optim.LBFGS{Nothing, LineSearches.InitialStatic{Float64}, LineSearches.HagerZhang{Float64, Base.RefValue{Bool}}, Returns{Nothing}}, Float64, Optim.var"#Fminbox##0#Fminbox##1"}, ℓmax::Float64, normalise::Bool, threshold::Float64, min_steps::Int64, spline_alg::Val{Interpolations.FritschCarlsonMonotonicInterpolation}, extrap::Type, confidence_interval_method::Val{:spline}, conf_level::Float64) @ ProfileLikelihood ~/.julia/packages/ProfileLikelihood/tckDY/src/profile_likelihood.jl:243 [13] profile(prob::LikelihoodProblem{5, SciMLBase.OptimizationProblem{true, SciMLBase.OptimizationFunction{true, ADTypes.AutoForwardDiff{nothing, Nothing}, ProfileLikelihood.var"#negate_loglik##0#negate_loglik##1"{Main.var"##ProfileLikelihood#149".var"#loglik_fnc#loglik_fnc##5"}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, typeof(SciMLBase.DEFAULT_OBSERVED_NO_TIME), Nothing, Nothing, SymbolicIndexingInterface.SymbolCache{Dict{Symbol, Int64}, Nothing, Nothing, Nothing, Dict{Symbol, Float64}}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing}, Vector{Float64}, Tuple{Vector{Float64}, Matrix{Float64}, PreallocationTools.DiffCache{Vector{Float64}, Vector{Float64}}, Int64, PreallocationTools.DiffCache{Vector{Float64}, Vector{Float64}}}, Vector{Float64}, Vector{Float64}, Nothing, Nothing, Nothing, Nothing, @Kwargs{}}, Tuple{Vector{Float64}, Matrix{Float64}, PreallocationTools.DiffCache{Vector{Float64}, Vector{Float64}}, Int64, PreallocationTools.DiffCache{Vector{Float64}, Vector{Float64}}}, Main.var"##ProfileLikelihood#149".var"#loglik_fnc#loglik_fnc##5", Vector{Float64}, SymbolicIndexingInterface.SymbolCache{Dict{Symbol, Int64}, Nothing, Nothing, Nothing, Dict{Symbol, Float64}}}, sol::ProfileLikelihood.LikelihoodSolution{5, Vector{Float64}, LikelihoodProblem{5, SciMLBase.OptimizationProblem{true, SciMLBase.OptimizationFunction{true, ADTypes.AutoForwardDiff{nothing, Nothing}, ProfileLikelihood.var"#negate_loglik##0#negate_loglik##1"{Main.var"##ProfileLikelihood#149".var"#loglik_fnc#loglik_fnc##5"}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, typeof(SciMLBase.DEFAULT_OBSERVED_NO_TIME), Nothing, Nothing, SymbolicIndexingInterface.SymbolCache{Dict{Symbol, Int64}, Nothing, Nothing, Nothing, Dict{Symbol, Float64}}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing}, Vector{Float64}, Tuple{Vector{Float64}, Matrix{Float64}, PreallocationTools.DiffCache{Vector{Float64}, Vector{Float64}}, Int64, PreallocationTools.DiffCache{Vector{Float64}, Vector{Float64}}}, Vector{Float64}, Vector{Float64}, Nothing, Nothing, Nothing, Nothing, @Kwargs{}}, Tuple{Vector{Float64}, Matrix{Float64}, PreallocationTools.DiffCache{Vector{Float64}, Vector{Float64}}, Int64, PreallocationTools.DiffCache{Vector{Float64}, Vector{Float64}}}, Main.var"##ProfileLikelihood#149".var"#loglik_fnc#loglik_fnc##5", Vector{Float64}, SymbolicIndexingInterface.SymbolCache{Dict{Symbol, Int64}, Nothing, Nothing, Nothing, Dict{Symbol, Float64}}}, Float64, SciMLBase.ReturnCode.T, Optim.Fminbox{Optim.LBFGS{Nothing, LineSearches.InitialStatic{Float64}, LineSearches.HagerZhang{Float64, Base.RefValue{Bool}}, Returns{Nothing}}, Float64, Optim.var"#Fminbox##0#Fminbox##1"}}, n::Vector{Int64}; alg::Optim.Fminbox{Optim.LBFGS{Nothing, LineSearches.InitialStatic{Float64}, LineSearches.HagerZhang{Float64, Base.RefValue{Bool}}, Returns{Nothing}}, Float64, Optim.var"#Fminbox##0#Fminbox##1"}, conf_level::Float64, confidence_interval_method::Symbol, threshold::Float64, resolution::Vector{Int64}, param_ranges::Vector{Tuple{LinRange{Float64, Int64}, LinRange{Float64, Int64}}}, min_steps::Int64, min_steps_fallback::Symbol, normalise::Bool, spline_alg::Type, extrap::Type, parallel::Bool, next_initial_estimate_method::Symbol, kwargs::@Kwargs{}) @ ProfileLikelihood ~/.julia/packages/ProfileLikelihood/tckDY/src/profile_likelihood.jl:83 [14] kwcall(::@NamedTuple{resolution::Vector{Int64}, min_steps::Int64}, ::typeof(profile), prob::LikelihoodProblem{5, SciMLBase.OptimizationProblem{true, SciMLBase.OptimizationFunction{true, ADTypes.AutoForwardDiff{nothing, Nothing}, ProfileLikelihood.var"#negate_loglik##0#negate_loglik##1"{Main.var"##ProfileLikelihood#149".var"#loglik_fnc#loglik_fnc##5"}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, typeof(SciMLBase.DEFAULT_OBSERVED_NO_TIME), Nothing, Nothing, SymbolicIndexingInterface.SymbolCache{Dict{Symbol, Int64}, Nothing, Nothing, Nothing, Dict{Symbol, Float64}}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing}, Vector{Float64}, Tuple{Vector{Float64}, Matrix{Float64}, PreallocationTools.DiffCache{Vector{Float64}, Vector{Float64}}, Int64, PreallocationTools.DiffCache{Vector{Float64}, Vector{Float64}}}, Vector{Float64}, Vector{Float64}, Nothing, Nothing, Nothing, Nothing, @Kwargs{}}, Tuple{Vector{Float64}, Matrix{Float64}, PreallocationTools.DiffCache{Vector{Float64}, Vector{Float64}}, Int64, PreallocationTools.DiffCache{Vector{Float64}, Vector{Float64}}}, Main.var"##ProfileLikelihood#149".var"#loglik_fnc#loglik_fnc##5", Vector{Float64}, SymbolicIndexingInterface.SymbolCache{Dict{Symbol, Int64}, Nothing, Nothing, Nothing, Dict{Symbol, Float64}}}, sol::ProfileLikelihood.LikelihoodSolution{5, Vector{Float64}, LikelihoodProblem{5, SciMLBase.OptimizationProblem{true, SciMLBase.OptimizationFunction{true, ADTypes.AutoForwardDiff{nothing, Nothing}, ProfileLikelihood.var"#negate_loglik##0#negate_loglik##1"{Main.var"##ProfileLikelihood#149".var"#loglik_fnc#loglik_fnc##5"}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, typeof(SciMLBase.DEFAULT_OBSERVED_NO_TIME), Nothing, Nothing, SymbolicIndexingInterface.SymbolCache{Dict{Symbol, Int64}, Nothing, Nothing, Nothing, Dict{Symbol, Float64}}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing}, Vector{Float64}, Tuple{Vector{Float64}, Matrix{Float64}, PreallocationTools.DiffCache{Vector{Float64}, Vector{Float64}}, Int64, PreallocationTools.DiffCache{Vector{Float64}, Vector{Float64}}}, Vector{Float64}, Vector{Float64}, Nothing, Nothing, Nothing, Nothing, @Kwargs{}}, Tuple{Vector{Float64}, Matrix{Float64}, PreallocationTools.DiffCache{Vector{Float64}, Vector{Float64}}, Int64, PreallocationTools.DiffCache{Vector{Float64}, Vector{Float64}}}, Main.var"##ProfileLikelihood#149".var"#loglik_fnc#loglik_fnc##5", Vector{Float64}, SymbolicIndexingInterface.SymbolCache{Dict{Symbol, Int64}, Nothing, Nothing, Nothing, Dict{Symbol, Float64}}}, Float64, SciMLBase.ReturnCode.T, Optim.Fminbox{Optim.LBFGS{Nothing, LineSearches.InitialStatic{Float64}, LineSearches.HagerZhang{Float64, Base.RefValue{Bool}}, Returns{Nothing}}, Float64, Optim.var"#Fminbox##0#Fminbox##1"}}, n::Vector{Int64}) @ ProfileLikelihood ~/.julia/packages/ProfileLikelihood/tckDY/src/profile_likelihood.jl:48 [15] top-level scope @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/profile_likelihood.jl:406 [16] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1961 [inlined] [17] macro expansion @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/profile_likelihood.jl:442 [inlined] [18] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [19] top-level scope @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:34 [20] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1961 [inlined] [21] macro expansion @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/runtests.jl:34 [inlined] [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] top-level scope @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/runtests.jl:6 [24] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1961 [inlined] [25] macro expansion @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/runtests.jl:33 [inlined] [26] macro expansion @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 [inlined] [27] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [28] top-level scope @ none:6 [29] eval(m::Module, e::Any) @ Core ./boot.jl:489 [30] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [31] _start() @ Base ./client.jl:577 More parallel testing for a problem involving an integrator: Error During Test at /home/pkgeval/.julia/packages/ProfileLikelihood/IKzxN/test/profile_likelihood.jl:508 Got exception outside of a @test UndefVarError: `Tsit5` not defined in `Main.var"##ProfileLikelihood#149"` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] top-level scope @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/profile_likelihood.jl:509 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1961 [inlined] [3] macro expansion @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/profile_likelihood.jl:535 [inlined] [4] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [5] top-level scope @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:34 [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1961 [inlined] [7] macro expansion @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/runtests.jl:34 [inlined] [8] eval(m::Module, e::Any) @ Core ./boot.jl:489 [9] top-level scope @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/runtests.jl:6 [10] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1961 [inlined] [11] macro expansion @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/runtests.jl:33 [inlined] [12] macro expansion @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 [inlined] [13] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [14] top-level scope @ none:6 [15] eval(m::Module, e::Any) @ Core ./boot.jl:489 [16] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [17] _start() @ Base ./client.jl:577 ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 878 running 1 of 1 signal (10): User defined signal 1 _ZNK4llvm11Instruction12getSuccessorEj at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZL22mergeConditionalStoresPN4llvm10BranchInstES1_PNS_14DomTreeUpdaterERKNS_10DataLayoutERKNS_19TargetTransformInfoE.isra.0 at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm11simplifyCFGEPNS_10BasicBlockERKNS_19TargetTransformInfoEPNS_14DomTreeUpdaterERKNS_18SimplifyCFGOptionsENS_8ArrayRefINS_6WeakVHEEE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZL22iterativelySimplifyCFGRN4llvm8FunctionERKNS_19TargetTransformInfoEPNS_14DomTreeUpdaterERKNS_18SimplifyCFGOptionsE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZL23simplifyFunctionCFGImplRN4llvm8FunctionERKNS_19TargetTransformInfoEPNS_13DominatorTreeERKNS_18SimplifyCFGOptionsE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZL19simplifyFunctionCFGRN4llvm8FunctionERKNS_19TargetTransformInfoEPNS_13DominatorTreeERKNS_18SimplifyCFGOptionsE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm15SimplifyCFGPass3runERNS_8FunctionERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:91 _ZN4llvm11PassManagerINS_8FunctionENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:91 _ZN4llvm27ModuleToFunctionPassAdaptor3runERNS_6ModuleERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:91 _ZN4llvm11PassManagerINS_6ModuleENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/src/pipeline.cpp:791 operator() at /source/src/jitlayers.cpp:1513 withModuleDo<(anonymous namespace)::sizedOptimizerT::operator()(llvm::orc::ThreadSafeModule) [with long unsigned int N = 4]:: > at /source/usr/include/llvm/ExecutionEngine/Orc/ThreadSafeModule.h:136 [inlined] operator() at /source/src/jitlayers.cpp:1474 [inlined] operator() at /source/src/jitlayers.cpp:1649 [inlined] addModule at /source/src/jitlayers.cpp:2106 jl_compile_codeinst_now at /source/src/jitlayers.cpp:682 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:876 jl_compile_method_internal at /source/src/gf.c:3648 _jl_invoke at /source/src/gf.c:4108 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2275 [inlined] start_task at /source/src/task.c:1281 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Replacing a solutionOverhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007dc0d85e2770 Total snapshots: 90. Utilization: 100% : Error During Test at /home/pkgeval/.julia/packages/ProfileLikelihood/IKzxN/test/profile_likelihood.jl:762 Got exception outside of a @test UndefVarError: `Rosenbrock23` not defined in `Main.var"##ProfileLikelihood#149"` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] top-level scope @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/profile_likelihood.jl:763 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1961 [inlined] [3] macro expansion @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/profile_likelihood.jl:776 [inlined] [4] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [5] top-level scope @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:34 [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1961 [inlined] [7] macro expansion @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/runtests.jl:34 [inlined] [8] eval(m::Module, e::Any) @ Core ./boot.jl:489 [9] top-level scope @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/runtests.jl:6 [10] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1961 [inlined] [11] macro expansion @ ~/.julia/packages/ProfileLikelihood/IKzxN/test/runtests.jl:33 [inlined] [12] macro expansion @ ~/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 [inlined] [13] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [14] top-level scope @ none:6 [15] eval(m::Module, e::Any) @ Core ./boot.jl:489 [16] exec_options(opts::Base.JLOptions) @ Base ./client.jl:310 [17] _start() @ Base ./client.jl:577 ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1217 wait_forever at ./task.jl:1139 jfptr_wait_forever_42350.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2275 [inlined] start_task at /source/src/task.c:1281 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000072d951c250f0 Total snapshots: 412. Utilization: 0% ╎412 @Base/task.jl:1139 wait_forever() 411╎ 412 @Base/task.jl:1217 wait() [878] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/ProfileLikelihood/IKzxN/test/profile_likelihood.jl:833 unknown function (ip: 0x7dc1574350d9) at /lib/x86_64-linux-gnu/libc.so.6 unknown function (ip: 0x7dc1574353f1) at /lib/x86_64-linux-gnu/libc.so.6 realloc at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) _ZN4llvm15SmallVectorBaseIjE8grow_podEPvmm at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm16LiveRangeUpdater3addENS_9LiveRange7SegmentE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm9LiveRange22MergeSegmentsInAsValueERKS0_PNS_6VNInfoE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN12_GLOBAL__N_113InlineSpiller5spillERN4llvm13LiveRangeEditE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm8RAGreedy17selectOrSplitImplERKNS_12LiveIntervalERNS_15SmallVectorImplINS_8RegisterEEERNS_8SmallSetIS5_Lj16ESt4lessIS5_EEERNS_11SmallVectorISt4pairIPS2_NS_10MCRegisterEELj8EEEj at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm8RAGreedy13selectOrSplitERKNS_12LiveIntervalERNS_15SmallVectorImplINS_8RegisterEEE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm12RegAllocBase16allocatePhysRegsEv at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm8RAGreedy20runOnMachineFunctionERNS_15MachineFunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm19MachineFunctionPass13runOnFunctionERNS_8FunctionE.part.0 at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm13FPPassManager13runOnFunctionERNS_8FunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm13FPPassManager11runOnModuleERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) _ZN4llvm6legacy15PassManagerImpl3runERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) operator() at /source/src/jitlayers.cpp:1628 addModule at /source/src/jitlayers.cpp:2119 jl_compile_codeinst_now at /source/src/jitlayers.cpp:682 jl_generate_fptr_for_unspecialized_impl at /source/src/jitlayers.cpp:927 jl_compile_method_internal at /source/src/gf.c:3672 _jl_invoke at /source/src/gf.c:4108 [inlined] ijl_invoke at /source/src/gf.c:4123 jl_toplevel_eval_flex at /source/src/toplevel.c:731 jl_eval_toplevel_stmts at /source/src/toplevel.c:585 jl_toplevel_eval_flex at /source/src/toplevel.c:683 ijl_toplevel_eval at /source/src/toplevel.c:754 ijl_toplevel_eval_in at /source/src/toplevel.c:799 eval at ./boot.jl:489 include_string at ./loading.jl:2954 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 _include at ./loading.jl:3014 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 unknown function (ip: 0x7dc12ce9ee72) at (unknown file) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2275 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:679 eval_body at /source/src/interpreter.c:550 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 jl_toplevel_eval_flex at /source/src/toplevel.c:742 jl_eval_toplevel_stmts at /source/src/toplevel.c:585 jl_eval_module_expr at /source/src/toplevel.c:248 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:650 ijl_toplevel_eval at /source/src/toplevel.c:754 ijl_toplevel_eval_in at /source/src/toplevel.c:799 eval at ./boot.jl:489 jfptr_eval_16425.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2275 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:679 eval_body at /source/src/interpreter.c:550 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 jl_toplevel_eval_flex at /source/src/toplevel.c:742 jl_eval_toplevel_stmts at /source/src/toplevel.c:585 jl_toplevel_eval_flex at /source/src/toplevel.c:683 ijl_toplevel_eval at /source/src/toplevel.c:754 ijl_toplevel_eval_in at /source/src/toplevel.c:799 eval at ./boot.jl:489 include_string at ./loading.jl:2954 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 _include at ./loading.jl:3014 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_59871.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2275 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:679 jl_interpret_toplevel_thunk at /source/src/interpreter.c:884 jl_toplevel_eval_flex at /source/src/toplevel.c:742 jl_eval_toplevel_stmts at /source/src/toplevel.c:585 jl_toplevel_eval_flex at /source/src/toplevel.c:683 ijl_toplevel_eval at /source/src/toplevel.c:754 ijl_toplevel_eval_in at /source/src/toplevel.c:799 eval at ./boot.jl:489 exec_options at ./client.jl:310 _start at ./client.jl:577 jfptr__start_71179.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2275 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7dc1573c4249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) Allocations: 450153019 (Pool: 450145293; Big: 7726); GC: 268 PkgEval terminated after 2757.73s: test duration exceeded the time limit