Package evaluation to test LAMMPS on Julia 1.13.0-DEV.1319 (9cddfda8ef*) started at 2025-10-16T16:09:36.763


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 9.43s


################################################################################
# Installation
#

Installing LAMMPS...
   Resolving package versions...
   Installed LAMMPS ─ v0.10.0
    Updating `~/.julia/environments/v1.13/Project.toml`
  [ee2e13b9] + LAMMPS v0.10.0
    Updating `~/.julia/environments/v1.13/Manifest.toml`
  [47edcb42] + ADTypes v1.18.0
  [8ce10254] + Bumper v0.7.1
  [fa961155] + CEnum v0.5.0
⌅ [a0c0ee7d] + DifferentiationInterface v0.6.54
  [ffbed154] + DocStringExtensions v0.9.5
  [692b3bcd] + JLLWrappers v1.7.1
  [ee2e13b9] + LAMMPS v0.10.0
  [da04e1cc] + MPI v0.20.23
  [3da0fdf6] + MPIPreferences v0.1.11
  [eebad327] + PkgVersion v0.3.3
  [aea7be01] + PrecompileTools v1.3.3
  [21216c6a] + Preferences v1.5.0
  [ae029012] + Requires v1.3.1
  [90137ffa] + StaticArrays v1.9.15
  [1e83bf80] + StaticArraysCore v1.4.3
  [c4a57d5a] + UnsafeArrays v1.0.8
  [4ee394cb] + CUDA_Driver_jll v13.0.1+1
  [76a88914] + CUDA_Runtime_jll v0.19.1+0
  [f5851436] + FFTW_jll v3.3.11+0
  [e33a78d0] + Hwloc_jll v2.12.2+0
  [5b3ab26d] + LAMMPS_jll v2.9.0+0
  [1d63c593] + LLVMOpenMP_jll v18.1.8+0
  [94ce4f54] + Libiconv_jll v1.18.0+0
  [7cb0a576] + MPICH_jll v4.3.1+0
  [f1f71cc9] + MPItrampoline_jll v5.5.4+0
  [9237b28f] + MicrosoftMPI_jll v10.1.4+3
  [656ef2d0] + OpenBLAS32_jll v0.3.29+0
  [fe0851c0] + OpenMPI_jll v5.0.8+0
⌅ [02c8fc9c] + XML2_jll v2.13.9+0
  [a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8ba89e20] + Distributed v1.11.0
  [f43a241f] + Downloads v1.7.0
  [7b1f6079] + FileWatching v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [4af54fe1] + LazyArtifacts v1.11.0
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.13.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [44cfe95a] + Pkg v1.13.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [f489334b] + StyledStrings v1.11.0
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] + LibCURL_jll v8.16.0+0
  [e37daf67] + LibGit2_jll v1.9.1+0
  [29816b5a] + LibSSH2_jll v1.11.3+1
  [14a3606d] + MozillaCACerts_jll v2025.9.9
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [458c3c95] + OpenSSL_jll v3.5.4+0
  [efcefdf7] + PCRE2_jll v10.46.0+0
  [83775a58] + Zlib_jll v1.3.1+2
  [3161d3a3] + Zstd_jll v1.5.7+1
  [8e850b90] + libblastrampoline_jll v5.15.0+0
  [8e850ede] + nghttp2_jll v1.67.1+0
  [3f19e933] + p7zip_jll v17.6.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 16.19s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 138.76s


################################################################################
# Testing
#

     Testing LAMMPS
      Status `/tmp/jl_dJP1xs/Project.toml`
  [47edcb42] ADTypes v1.18.0
  [7da242da] Enzyme v0.13.86
  [f6369f11] ForwardDiff v1.2.2
  [ee2e13b9] LAMMPS v0.10.0
  [da04e1cc] MPI v0.20.23
  [90137ffa] StaticArrays v1.9.15
  [c4a57d5a] UnsafeArrays v1.0.8
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_dJP1xs/Manifest.toml`
  [47edcb42] ADTypes v1.18.0
  [8ce10254] Bumper v0.7.1
  [fa961155] CEnum v0.5.0
  [bbf7d656] CommonSubexpressions v0.3.1
  [163ba53b] DiffResults v1.1.0
  [b552c78f] DiffRules v1.15.1
⌅ [a0c0ee7d] DifferentiationInterface v0.6.54
  [ffbed154] DocStringExtensions v0.9.5
  [7da242da] Enzyme v0.13.86
  [f151be2c] EnzymeCore v0.8.14
  [e2ba6199] ExprTools v0.1.10
  [f6369f11] ForwardDiff v1.2.2
  [61eb1bfa] GPUCompiler v1.7.2
  [92d709cd] IrrationalConstants v0.2.6
  [692b3bcd] JLLWrappers v1.7.1
  [ee2e13b9] LAMMPS v0.10.0
  [929cbde3] LLVM v9.4.4
  [2ab3a3ac] LogExpFunctions v0.3.29
  [da04e1cc] MPI v0.20.23
  [3da0fdf6] MPIPreferences v0.1.11
  [1914dd2f] MacroTools v0.5.16
  [77ba4419] NaNMath v1.1.3
  [d8793406] ObjectFile v0.5.0
  [eebad327] PkgVersion v0.3.3
  [aea7be01] PrecompileTools v1.3.3
  [21216c6a] Preferences v1.5.0
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.1
  [6c6a2e73] Scratch v1.3.0
  [276daf66] SpecialFunctions v2.6.1
  [90137ffa] StaticArrays v1.9.15
  [1e83bf80] StaticArraysCore v1.4.3
  [53d494c1] StructIO v0.3.1
  [e689c965] Tracy v0.1.6
  [c4a57d5a] UnsafeArrays v1.0.8
  [4ee394cb] CUDA_Driver_jll v13.0.1+1
  [76a88914] CUDA_Runtime_jll v0.19.1+0
  [7cc45869] Enzyme_jll v0.0.203+1
  [f5851436] FFTW_jll v3.3.11+0
  [e33a78d0] Hwloc_jll v2.12.2+0
  [5b3ab26d] LAMMPS_jll v2.9.0+0
  [dad2f222] LLVMExtra_jll v0.0.38+0
  [1d63c593] LLVMOpenMP_jll v18.1.8+0
  [ad6e5548] LibTracyClient_jll v0.9.1+6
  [94ce4f54] Libiconv_jll v1.18.0+0
  [7cb0a576] MPICH_jll v4.3.1+0
  [f1f71cc9] MPItrampoline_jll v5.5.4+0
  [9237b28f] MicrosoftMPI_jll v10.1.4+3
  [656ef2d0] OpenBLAS32_jll v0.3.29+0
  [fe0851c0] OpenMPI_jll v5.0.8+0
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
⌅ [02c8fc9c] XML2_jll v2.13.9+0
  [a65dc6b1] Xorg_libpciaccess_jll v0.18.1+0
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [8ba89e20] Distributed v1.11.0
  [f43a241f] Downloads v1.7.0
  [7b1f6079] FileWatching v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0
  [4af54fe1] LazyArtifacts v1.11.0
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.13.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [ca575930] NetworkOptions v1.3.0
  [44cfe95a] Pkg v1.13.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [6462fe0b] Sockets v1.11.0
  [2f01184e] SparseArrays v1.13.0
  [f489334b] StyledStrings v1.11.0
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] LibCURL_jll v8.16.0+0
  [e37daf67] LibGit2_jll v1.9.1+0
  [29816b5a] LibSSH2_jll v1.11.3+1
  [14a3606d] MozillaCACerts_jll v2025.9.9
  [4536629a] OpenBLAS_jll v0.3.29+0
  [05823500] OpenLibm_jll v0.8.7+0
  [458c3c95] OpenSSL_jll v3.5.4+0
  [efcefdf7] PCRE2_jll v10.46.0+0
  [bea87d4a] SuiteSparse_jll v7.10.1+0
  [83775a58] Zlib_jll v1.3.1+2
  [3161d3a3] Zstd_jll v1.5.7+1
  [8e850b90] libblastrampoline_jll v5.15.0+0
  [8e850ede] nghttp2_jll v1.67.1+0
  [3f19e933] p7zip_jll v17.6.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
LAMMPS (12 Jun 2025)
OMP_NUM_THREADS environment is not set. Defaulting to 1 thread. (src/comm.cpp:99)
  using 1 OpenMP thread(s) per MPI task
Total wall time: 0:00:00
ERROR: Invalid command-line argument: -nonesense (src/lammps.cpp:486)
LAMMPS Exception: ERROR: Invalid command-line argument: -nonesense (src/lammps.cpp:486)
Test Summary:          | Pass  Total  Time
Extract Setting/Global |    4      4  0.3s
Test Summary: | Pass  Total  Time
Extract Atom  |    7      7  0.4s
Test Summary: | Pass  Total  Time
Variables     |   10     10  2.1s
Test Summary:  | Pass  Total  Time
gather/scatter |   22     22  3.4s
Test Summary:                           | Pass  Total  Time
Gather bonds/angles/dihedrals/impropers |    6      6  0.8s
Test Summary:   | Pass  Total  Time
Extract Compute |    6      6  0.6s
Test Summary: | Pass  Total  Time
Utilities     |   10     10  1.4s
Test Summary: | Pass  Total  Time
Create Atoms  |    8      8  6.5s
Test Summary:     | Pass  Total  Time
Custom Properties |    9      9  0.5s
Test Summary: | Pass  Total  Time
Image Flags   |    3      3  0.1s
Test Summary: | Pass  Total  Time
Extract Box   |   11     11  0.5s
Test Summary:  | Pass  Total  Time
Neighbor lists |    4      4  0.2s
Test Summary:    | Pass  Total   Time
external_pair_lj |   20     20  17.9s
Test Summary:      | Pass  Total  Time
external_pair_coul |   20     20  1.3s
Fatal error in internal_Init_thread: Other MPI error, error stack:
internal_Init_thread(71)...........: MPI_Init_thread(argc=(nil), argv=(nil), required=2, provided=0x7ffd95033700) failed
MPII_Init_thread(257)..............: 
MPID_Init(65)......................: 
init_world(169)....................: channel initialization failed
MPIDI_CH3_Init(84).................: 
MPID_nem_init(314).................: 
MPID_nem_tcp_init(175).............: 
MPID_nem_tcp_get_business_card(400): 
GetSockInterfaceAddr(373)..........: gethostbyname failed, LAMMPS-primary-h917MhNT (errno 2)

MPI: Test Failed at /home/pkgeval/.julia/packages/LAMMPS/CBMl8/test/runtests.jl:484
  Expression: success(pipeline(`$(MPI.mpiexec()) -n 2 $(Base.julia_cmd()) mpitest.jl`, stderr = stderr, stdout = stdout))
   Evaluated: success(pipeline(pipeline(setenv(`/home/pkgeval/.julia/artifacts/117d9048128625bb3418b0b4cca48739c5d28740/bin/mpiexec -n 2 /opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so --depwarn=yes --check-bounds=yes --pkgimages=existing -g1 --startup-file=no mpitest.jl`,["JULIA_NUM_PRECOMPILE_TASKS=1", "JULIA_DEPOT_PATH=/home/pkgeval/.julia:/usr/local/share/julia:", "UCX_ERROR_SIGNALS=SIGILL,SIGBUS,SIGFPE", "JULIA_PKG_PRECOMPILE_AUTO=0", "LD_LIBRARY_PATH=/opt/julia/bin/../lib/julia:/home/pkgeval/.julia/artifacts/5acd766faaca59c3c1f3cfa67e2bf6dcf1e3e883/lib:/home/pkgeval/.julia/artifacts/4a89e14d2f652ad45bcc093d040c97fbcc1a3669/lib:/home/pkgeval/.julia/artifacts/02f7ccbf4bbe00dcdd34eba3f36cd5e8f76f1769/lib:/home/pkgeval/.julia/artifacts/fddb41451df711c595969c8571404433623c75f6/lib:/home/pkgeval/.julia/artifacts/117d9048128625bb3418b0b4cca48739c5d28740/lib:/opt/julia/bin/../lib/julia:/opt/julia/bin/../lib", "CI=true", "UCX_MEMTYPE_CACHE=no", "OPENBLAS_NUM_THREADS=1", "HOME=/home/pkgeval", "JULIA_PKGEVAL=true", "JULIA_NUM_THREADS=1", "OPENBLAS_MAIN_FREE=1", "PATH=/home/pkgeval/.julia/artifacts/4a89e14d2f652ad45bcc093d040c97fbcc1a3669/bin:/home/pkgeval/.julia/artifacts/fddb41451df711c595969c8571404433623c75f6/bin:/home/pkgeval/.julia/artifacts/117d9048128625bb3418b0b4cca48739c5d28740/bin:/usr/local/bin:/usr/local/sbin:/usr/bin:/usr/sbin:/bin:/sbin:/opt/julia/bin", "JULIA_CPU_THREADS=1", "DISPLAY=:1", "PKGEVAL=true", "JULIA_LOAD_PATH=@:/tmp/jl_dJP1xs", "PYTHON=", "LANG=C.UTF-8", "R_HOME=*"]), stdout>Base.PipeEndpoint(RawFD(12) open, 0 bytes waiting)), stderr>Base.PipeEndpoint(RawFD(14) open, 0 bytes waiting)))
  Stacktrace:
   [1] top-level scope
     @ ~/.julia/packages/LAMMPS/CBMl8/test/runtests.jl:484
   [2] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1961 [inlined]
   [3] macro expansion
     @ ~/.julia/packages/LAMMPS/CBMl8/test/runtests.jl:484 [inlined]
   [4] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:753 [inlined]
Test Summary: | Fail  Total     Time
MPI           |    1      1  1m07.5s
RNG of the outermost testset: Random.Xoshiro(0x3a36a52305e8c5ac, 0x1d057f18d11b57c1, 0xa980b0b6c0fd0dbe, 0x01635610a8a81b18, 0xea81f073dac4cf4d)
ERROR: LoadError: Some tests did not pass: 0 passed, 1 failed, 0 errored, 0 broken.
in expression starting at /home/pkgeval/.julia/packages/LAMMPS/CBMl8/test/runtests.jl:482

Testing failed after 132.41s

ERROR: LoadError: Package LAMMPS errored during testing
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2674
  [3] test
    @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2523 [inlined]
  [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:548
  [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:525
  [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:172
  [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:161
  [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:160
  [9] test
    @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:160 [inlined]
 [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String)
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:159
 [11] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:219
 [12] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [13] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:344
 [14] _start()
    @ Base ./client.jl:577
in expression starting at /PkgEval.jl/scripts/evaluate.jl:210

PkgEval failed after 375.28s: package has test failures