Package evaluation to test Cambrian on Julia 1.13.0-DEV.1319 (9cddfda8ef*) started at 2025-10-16T13:51:45.509


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 9.86s


################################################################################
# Installation
#

Installing Cambrian...
   Resolving package versions...
    Updating `~/.julia/environments/v1.13/Project.toml`
  [7f27c84d] + Cambrian v0.2.1
    Updating `~/.julia/environments/v1.13/Manifest.toml`
  [7f27c84d] + Cambrian v0.2.1
  [59287772] + Formatting v0.4.3
  [692b3bcd] + JLLWrappers v1.7.1
⌅ [682c06a0] + JSON v0.21.4
  [69de0a69] + Parsers v2.8.3
  [aea7be01] + PrecompileTools v1.3.3
  [21216c6a] + Preferences v1.5.0
  [10745b16] + Statistics v1.11.1
  [69024149] + StringEncodings v0.3.7
  [ddb6d928] + YAML v0.4.14
  [94ce4f54] + Libiconv_jll v1.18.0+0
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8ba89e20] + Distributed v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.13.0
  [56ddb016] + Logging v1.11.0
  [a63ad114] + Mmap v1.11.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [1a1011a3] + SharedArrays v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [fa267f1f] + TOML v1.0.3
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [8e850b90] + libblastrampoline_jll v5.15.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 5.27s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 24.88s


################################################################################
# Testing
#

     Testing Cambrian
      Status `/tmp/jl_b187ry/Project.toml`
  [7f27c84d] Cambrian v0.2.1
  [ce6b1742] RDatasets v0.7.7
  [10745b16] Statistics v1.11.1
  [ddb6d928] YAML v0.4.14
  [8ba89e20] Distributed v1.11.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_b187ry/Manifest.toml`
  [336ed68f] CSV v0.10.15
  [7f27c84d] Cambrian v0.2.1
⌅ [324d7699] CategoricalArrays v0.10.8
  [944b1d66] CodecZlib v0.7.8
  [34da2185] Compat v4.18.1
  [a8cc5b0e] Crayons v4.1.1
  [9a962f9c] DataAPI v1.16.0
  [a93c6f00] DataFrames v1.8.0
  [864edb3b] DataStructures v0.19.1
  [e2d170a0] DataValueInterfaces v1.0.0
  [e2ba6199] ExprTools v0.1.10
  [5789e2e9] FileIO v1.17.1
  [48062228] FilePathsBase v0.9.24
  [59287772] Formatting v0.4.3
  [842dd82b] InlineStrings v1.4.5
  [41ab1584] InvertedIndices v1.3.1
  [82899510] IteratorInterfaceExtensions v1.0.0
  [692b3bcd] JLLWrappers v1.7.1
⌅ [682c06a0] JSON v0.21.4
  [b964fa9f] LaTeXStrings v1.4.0
  [e1d29d7a] Missings v1.2.0
  [78c3b35d] Mocking v0.8.1
  [bac558e1] OrderedCollections v1.8.1
  [69de0a69] Parsers v2.8.3
  [2dfb63ee] PooledArrays v1.4.3
  [aea7be01] PrecompileTools v1.3.3
  [21216c6a] Preferences v1.5.0
  [08abe8d2] PrettyTables v3.1.0
⌅ [df47a6cb] RData v0.8.3
  [ce6b1742] RDatasets v0.7.7
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.1
  [6c6a2e73] Scratch v1.3.0
  [91c51154] SentinelArrays v1.4.8
  [a2af1166] SortingAlgorithms v1.2.2
  [10745b16] Statistics v1.11.1
  [69024149] StringEncodings v0.3.7
  [892a3eda] StringManipulation v0.4.1
  [dc5dba14] TZJData v1.5.0+2025b
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.12.1
  [f269a46b] TimeZones v1.22.1
  [3bb67fe8] TranscodingStreams v0.11.3
  [ea10d353] WeakRefStrings v1.4.2
  [76eceee3] WorkerUtilities v1.6.1
  [ddb6d928] YAML v0.4.14
  [94ce4f54] Libiconv_jll v1.18.0+0
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [8ba89e20] Distributed v1.11.0
  [f43a241f] Downloads v1.7.0
  [7b1f6079] FileWatching v1.11.0
  [9fa8497b] Future v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.13.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [a63ad114] Mmap v1.11.0
  [ca575930] NetworkOptions v1.3.0
  [44cfe95a] Pkg v1.13.0
  [de0858da] Printf v1.11.0
  [3fa0cd96] REPL v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [1a1011a3] SharedArrays v1.11.0
  [6462fe0b] Sockets v1.11.0
  [f489334b] StyledStrings v1.11.0
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] LibCURL_jll v8.16.0+0
  [e37daf67] LibGit2_jll v1.9.1+0
  [29816b5a] LibSSH2_jll v1.11.3+1
  [14a3606d] MozillaCACerts_jll v2025.9.9
  [4536629a] OpenBLAS_jll v0.3.29+0
  [458c3c95] OpenSSL_jll v3.5.4+0
  [efcefdf7] PCRE2_jll v10.46.0+0
  [83775a58] Zlib_jll v1.3.1+2
  [3161d3a3] Zstd_jll v1.5.7+1
  [8e850b90] libblastrampoline_jll v5.15.0+0
  [8e850ede] nghttp2_jll v1.67.1+0
  [3f19e933] p7zip_jll v17.6.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
Test Summary:   | Pass  Total   Time
bool individual |   10     10  12.3s
Test Summary:    | Pass  Total  Time
float individual |   11     11  4.9s
Test Summary:  | Pass  Total  Time
Random fitness |   31     31  2.6s
1+λ step sum_eval  0.000097 seconds (182 allocations: 6.938 KiB)
elapsed time (ns):  97259.0
gc time (ns):       0
bytes allocated:    7104
pool allocs:        182
non-pool GC allocs: 0
minor collections:  0
full collections:   0
1+λ step rosenbrock  0.000050 seconds (210 allocations: 7.844 KiB)
elapsed time (ns):  50079.0
gc time (ns):       0
bytes allocated:    8032
pool allocs:        210
non-pool GC allocs: 0
minor collections:  0
full collections:   0
1+λ step moo  0.000038 seconds (157 allocations: 6.047 KiB)
elapsed time (ns):  38399.0
gc time (ns):       0
bytes allocated:    6192
pool allocs:        157
non-pool GC allocs: 0
minor collections:  0
full collections:   0
Test Summary: | Pass  Total  Time
1+λ           |  107    107  4.9s
WARNING: Method definition selection(Array{var"#s185", N} where N where var"#s185"<:Cambrian.Individual) in module Cambrian at /home/pkgeval/.julia/packages/Cambrian/pcP88/src/selection.jl:17 overwritten in module Main at /home/pkgeval/.julia/packages/Cambrian/pcP88/test/ga.jl:8.
GA step sum_eval  1.104569 seconds (795.91 k allocations: 41.653 MiB, 99.80% compilation time)
elapsed time (ns):  1.104568724e9
gc time (ns):       0
bytes allocated:    43676112
pool allocs:        795380
non-pool GC allocs: 6
malloc() calls:     522
free() calls:       0
minor collections:  0
full collections:   0
GA step rosenbrock  0.000619 seconds (1.35 k allocations: 57.078 KiB)
elapsed time (ns):  618885.0
gc time (ns):       0
bytes allocated:    58448
pool allocs:        1349
non-pool GC allocs: 0
minor collections:  0
full collections:   0
GA step moo  0.000679 seconds (1.59 k allocations: 70.094 KiB)
elapsed time (ns):  679333.0
gc time (ns):       0
bytes allocated:    71776
pool allocs:        1594
non-pool GC allocs: 0
minor collections:  0
full collections:   0

Multi-objective: Test Failed at /home/pkgeval/.julia/packages/Cambrian/pcP88/test/ga.jl:32
  Expression: !(new_best < best)
   Evaluated: !({"genes":[0.5538355931366344,0.43348366392086624,0.4964908501413613,0.2806668269449051,0.36399371954878923,0.826873318171842,0.02833020481747328,0.8746939634310361,0.6579148400557407,0.60014644778919],"fitness":[0.5116429427957838,0.2532597945694204,0.02833020481747328]} < {"genes":[0.40717273622628436,0.42028923213552816,0.034916458355995994,0.5348631104911257,0.06284751914003694,0.8494280756950445,0.8367532136360685,0.43288669630717425,0.6571371376660683,0.9392862137791327],"fitness":[0.517558039343246,0.3123707997488728,0.034916458355995994]})
  Stacktrace:
   [1] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:753 [inlined]
   [2] test_ga_evo(fitness::var"#moo#moo##1", d_fitness::Int64)
     @ Main ~/.julia/packages/Cambrian/pcP88/test/ga.jl:32
   [3] top-level scope
     @ ~/.julia/packages/Cambrian/pcP88/test/ga.jl:37
   [4] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1961 [inlined]
   [5] macro expansion
     @ ~/.julia/packages/Cambrian/pcP88/test/ga.jl:55 [inlined]
   [6] macro expansion
     @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1961 [inlined]
   [7] macro expansion
     @ ~/.julia/packages/Cambrian/pcP88/test/ga.jl:58 [inlined]
Test Summary:     | Pass  Fail  Total   Time
Genetic Algorithm |   74     1     75  10.7s
  Sum of genes    |   25           25   5.0s
  Rosenbrock      |   25           25   0.6s
  Multi-objective |   24     1     25   5.2s
RNG of the outermost testset: Random.Xoshiro(0x5d20ec22a5a5c07a, 0x8c1db513d0bddde6, 0x8d5af65e08dcface, 0x7b9e29988540f388, 0x2593fe5fe8f6e8ea)
ERROR: LoadError: Some tests did not pass: 74 passed, 1 failed, 0 errored, 0 broken.
in expression starting at /home/pkgeval/.julia/packages/Cambrian/pcP88/test/ga.jl:36
in expression starting at /home/pkgeval/.julia/packages/Cambrian/pcP88/test/runtests.jl:7

Testing failed after 62.09s

ERROR: LoadError: Package Cambrian errored during testing
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2674
  [3] test
    @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2523 [inlined]
  [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:548
  [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:525
  [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:172
  [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:161
  [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:160
  [9] test
    @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:160 [inlined]
 [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String)
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:159
 [11] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:219
 [12] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [13] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:344
 [14] _start()
    @ Base ./client.jl:577
in expression starting at /PkgEval.jl/scripts/evaluate.jl:210

PkgEval failed after 118.46s: package has test failures