Package evaluation to test MendelImpute on Julia 1.13.0-DEV.1296 (e8025198af*) started at 2025-10-13T01:55:47.944


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 8.58s


################################################################################
# Installation
#

Installing MendelImpute...
   Resolving package versions...
    Updating `~/.julia/environments/v1.13/Project.toml`
  [e47305d1] + MendelImpute v1.2.6
    Updating `~/.julia/environments/v1.13/Manifest.toml`
  [621f4979] + AbstractFFTs v1.5.0
  [7d9f7c33] + Accessors v0.1.42
  [79e6a3ab] + Adapt v4.4.0
  [66dad0bd] + AliasTables v1.1.3
  [7d9fca2a] + Arpack v0.5.4
  [4fba245c] + ArrayInterface v7.20.0
  [4c555306] + ArrayLayouts v1.12.0
  [67c07d97] + Automa v1.1.0
  [13072b0f] + AxisAlgorithms v1.1.0
⌅ [6db4b851] + BGEN v0.1.17
  [28d598bf] + BGZFStreams v0.3.2
  [fbb218c0] + BSON v0.3.9
  [47718e42] + BioGenerics v0.1.5
  [d1d4a3ce] + BitFlags v0.1.9
  [62783981] + BitTwiddlingConvenienceFunctions v0.1.6
  [e1450e63] + BufferedStreams v1.2.2
  [2a0fbf3d] + CPUSummary v0.2.7
  [336ed68f] + CSV v0.10.15
  [d360d2e6] + ChainRulesCore v1.26.0
  [fb6a15b2] + CloseOpenIntervals v0.1.13
  [aaaa29a8] + Clustering v0.15.8
  [523fee87] + CodecBzip2 v0.8.5
  [ba30903b] + CodecXz v0.7.4
  [944b1d66] + CodecZlib v0.7.8
  [6b39b394] + CodecZstd v0.8.6
  [35d6a980] + ColorSchemes v3.31.0
  [3da002f7] + ColorTypes v0.12.1
  [c3611d14] + ColorVectorSpace v0.11.0
  [5ae59095] + Colors v0.13.1
  [861a8166] + Combinatorics v1.0.3
  [38540f10] + CommonSolve v0.2.4
  [f70d9fcc] + CommonWorldInvalidations v1.0.0
  [34da2185] + Compat v4.18.1
  [a33af91c] + CompositionsBase v0.1.2
  [f0e56b4a] + ConcurrentUtilities v2.5.0
  [187b0558] + ConstructionBase v1.6.0
  [d38c429a] + Contour v0.6.3
  [adafc99b] + CpuId v0.3.1
  [a8cc5b0e] + Crayons v4.1.1
  [a10d1c49] + DBInterface v2.6.1
  [9a962f9c] + DataAPI v1.16.0
  [a93c6f00] + DataFrames v1.8.0
  [864edb3b] + DataStructures v0.19.1
  [e2d170a0] + DataValueInterfaces v1.0.0
  [8bb1440f] + DelimitedFiles v1.9.1
  [b4f34e82] + Distances v0.10.12
  [31c24e10] + Distributions v0.25.122
  [ffbed154] + DocStringExtensions v0.9.5
  [460bff9d] + ExceptionUnwrapping v0.1.11
  [c87230d0] + FFMPEG v0.4.4
  [7a1cc6ca] + FFTW v1.10.0
  [5789e2e9] + FileIO v1.17.1
  [48062228] + FilePathsBase v0.9.24
  [1a297f60] + FillArrays v1.14.0
  [53c48c17] + FixedPointNumbers v0.8.5
  [1fa38f19] + Format v1.3.7
  [28b8d3ca] + GR v0.73.17
  [c27321d9] + Glob v1.3.1
  [42e2da0e] + Grisu v1.0.2
  [d853e229] + GroupSlices v0.0.3
  [cd3eb016] + HTTP v1.10.19
  [3e5b6fbb] + HostCPUFeatures v0.1.17
  [34004b35] + HypergeometricFunctions v0.3.28
  [09f84164] + HypothesisTests v0.11.5
  [615f187c] + IfElse v0.1.1
  [842dd82b] + InlineStrings v1.4.5
  [a98d9a8b] + Interpolations v0.16.2
  [3587e190] + InverseFunctions v0.1.17
  [41ab1584] + InvertedIndices v1.3.1
  [92d709cd] + IrrationalConstants v0.2.4
  [82899510] + IteratorInterfaceExtensions v1.0.0
⌅ [033835bb] + JLD2 v0.4.54
  [1019f520] + JLFzf v0.1.11
  [692b3bcd] + JLLWrappers v1.7.1
  [9da8a3cd] + JLSO v2.7.0
  [682c06a0] + JSON v1.1.0
  [5ab0869b] + KernelDensity v0.6.10
  [b964fa9f] + LaTeXStrings v1.4.0
  [23fbe1c1] + Latexify v0.16.10
  [10f19ff3] + LayoutPointers v0.1.17
⌅ [5078a376] + LazyArrays v1.10.0
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [e6f89c97] + LoggingExtras v1.2.0
  [bdcacae8] + LoopVectorization v0.12.173
  [1914dd2f] + MacroTools v0.5.16
  [d125e4d3] + ManualMemory v0.1.8
⌅ [a3b82374] + MatrixFactorizations v2.2.0
  [739be429] + MbedTLS v1.1.9
  [442fdcdd] + Measures v0.3.2
  [f28f55f0] + Memento v1.4.1
  [e47305d1] + MendelImpute v1.2.6
  [e1d29d7a] + Missings v1.2.0
  [6f286f6a] + MultivariateStats v0.10.3
  [77ba4419] + NaNMath v1.1.3
  [b8a86587] + NearestNeighbors v0.4.22
  [510215fc] + Observables v0.5.5
  [6fe1bfb0] + OffsetArrays v1.17.0
  [4d8831e6] + OpenSSL v1.5.0
  [bac558e1] + OrderedCollections v1.8.1
  [90014a1f] + PDMats v0.11.35
  [69de0a69] + Parsers v2.8.3
  [ccf2f8ad] + PlotThemes v3.3.0
  [995b91a9] + PlotUtils v1.4.3
  [91a5bcdd] + Plots v1.41.1
  [1d0040c9] + PolyesterWeave v0.2.2
  [2dfb63ee] + PooledArrays v1.4.3
  [aea7be01] + PrecompileTools v1.3.3
  [21216c6a] + Preferences v1.5.0
  [08abe8d2] + PrettyTables v3.1.0
  [92933f4c] + ProgressMeter v1.11.0
  [43287f4e] + PtrArrays v1.3.0
  [1fd47b50] + QuadGK v2.11.2
  [c84ed2f1] + Ratios v0.4.5
  [3cdcf5f2] + RecipesBase v1.3.4
  [01d81517] + RecipesPipeline v0.6.12
  [189a3867] + Reexport v1.2.2
  [05181044] + RelocatableFolders v1.0.1
  [ae029012] + Requires v1.3.1
  [79098fc4] + Rmath v0.8.0
  [f2b01f46] + Roots v2.2.10
  [fdea26ae] + SIMD v3.7.2
  [94e857df] + SIMDTypes v0.1.0
  [476501e8] + SLEEFPirates v0.6.43
  [0aa819cd] + SQLite v1.6.1
  [431bcebd] + SciMLPublic v1.0.0
  [6c6a2e73] + Scratch v1.3.0
  [91c51154] + SentinelArrays v1.4.8
  [992d4aef] + Showoff v1.0.3
  [777ac1f9] + SimpleBufferStream v1.2.0
  [4e780e97] + SnpArrays v0.3.22
  [a2af1166] + SortingAlgorithms v1.2.2
  [276daf66] + SpecialFunctions v2.6.1
  [860ef19b] + StableRNGs v1.0.3
  [aedffcd0] + Static v1.3.0
  [0d7ed370] + StaticArrayInterface v1.8.0
  [90137ffa] + StaticArrays v1.9.15
  [1e83bf80] + StaticArraysCore v1.4.3
  [10745b16] + Statistics v1.11.1
  [82ae8749] + StatsAPI v1.7.1
  [2913bbd2] + StatsBase v0.34.6
  [4c63d2b9] + StatsFuns v1.5.0
  [f3b207a7] + StatsPlots v0.15.8
  [892a3eda] + StringManipulation v0.4.1
  [ec057cc2] + StructUtils v2.5.1
  [ab02a1b2] + TableOperations v1.2.0
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.1
  [62fd8b95] + TensorCore v0.1.1
  [8290d209] + ThreadingUtilities v0.5.5
⌅ [3bb67fe8] + TranscodingStreams v0.9.13
  [5c2747f8] + URIs v1.6.1
  [3a884ed6] + UnPack v1.0.2
  [1cfade01] + UnicodeFun v0.4.1
  [41fe7b60] + Unzip v0.2.0
  [a620830f] + VCFTools v0.2.10
  [28eba6e3] + VariantCallFormat v0.5.7
  [3d5dd08c] + VectorizationBase v0.21.72
  [ea10d353] + WeakRefStrings v1.4.2
  [cc8bc4a8] + Widgets v0.6.7
  [efce3f68] + WoodburyMatrices v1.0.0
  [76eceee3] + WorkerUtilities v1.6.1
⌅ [68821587] + Arpack_jll v3.5.1+1
  [6e34b625] + Bzip2_jll v1.0.9+0
  [83423d85] + Cairo_jll v1.18.5+0
  [ee1fde0b] + Dbus_jll v1.16.2+0
  [2702e6a9] + EpollShim_jll v0.0.20230411+1
  [2e619515] + Expat_jll v2.7.1+0
  [b22a6f82] + FFMPEG_jll v7.1.1+0
  [f5851436] + FFTW_jll v3.3.11+0
  [a3f928ae] + Fontconfig_jll v2.17.1+0
  [d7e528f0] + FreeType2_jll v2.13.4+0
  [559328eb] + FriBidi_jll v1.0.17+0
  [0656b61e] + GLFW_jll v3.4.0+2
  [d2c73de3] + GR_jll v0.73.17+0
  [b0724c58] + GettextRuntime_jll v0.22.4+0
  [61579ee1] + Ghostscript_jll v9.55.1+0
  [7746bdde] + Glib_jll v2.86.0+0
  [3b182d85] + Graphite2_jll v1.3.15+0
  [2e76f6c2] + HarfBuzz_jll v8.5.1+0
  [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0
  [aacddb02] + JpegTurbo_jll v3.1.3+0
  [c1c5ebd0] + LAME_jll v3.100.3+0
  [88015f11] + LERC_jll v4.0.1+0
  [1d63c593] + LLVMOpenMP_jll v18.1.8+0
  [dd4b983a] + LZO_jll v2.10.3+0
  [e9f186c6] + Libffi_jll v3.4.7+0
  [7e76a0d4] + Libglvnd_jll v1.7.1+1
  [94ce4f54] + Libiconv_jll v1.18.0+0
  [4b2f31a3] + Libmount_jll v2.41.2+0
  [89763e89] + Libtiff_jll v4.7.2+0
  [38a345b3] + Libuuid_jll v2.41.2+0
  [856f044c] + MKL_jll v2025.2.0+0
  [c8ffd9c3] + MbedTLS_jll v2.28.10+0
  [e7412a2a] + Ogg_jll v1.3.6+0
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
  [91d4177d] + Opus_jll v1.5.2+0
  [36c8627f] + Pango_jll v1.56.4+0
⌅ [30392449] + Pixman_jll v0.44.2+0
  [c0090381] + Qt6Base_jll v6.8.2+2
  [629bc702] + Qt6Declarative_jll v6.8.2+1
  [ce943373] + Qt6ShaderTools_jll v6.8.2+1
  [e99dba38] + Qt6Wayland_jll v6.8.2+2
  [f50d1b31] + Rmath_jll v0.5.1+0
  [76ed43ae] + SQLite_jll v3.48.0+0
  [a44049a8] + Vulkan_Loader_jll v1.3.243+0
  [a2964d1f] + Wayland_jll v1.24.0+0
  [ffd25f8a] + XZ_jll v5.8.1+0
  [f67eecfb] + Xorg_libICE_jll v1.1.2+0
  [c834827a] + Xorg_libSM_jll v1.2.6+0
  [4f6342f7] + Xorg_libX11_jll v1.8.12+0
  [0c0b7dd1] + Xorg_libXau_jll v1.0.13+0
  [935fb764] + Xorg_libXcursor_jll v1.2.4+0
  [a3789734] + Xorg_libXdmcp_jll v1.1.6+0
  [1082639a] + Xorg_libXext_jll v1.3.7+0
  [d091e8ba] + Xorg_libXfixes_jll v6.0.2+0
  [a51aa0fd] + Xorg_libXi_jll v1.8.3+0
  [d1454406] + Xorg_libXinerama_jll v1.1.6+0
  [ec84b674] + Xorg_libXrandr_jll v1.5.5+0
  [ea2f1a96] + Xorg_libXrender_jll v0.9.12+0
  [c7cfdc94] + Xorg_libxcb_jll v1.17.1+0
  [cc61e674] + Xorg_libxkbfile_jll v1.1.3+0
  [e920d4aa] + Xorg_xcb_util_cursor_jll v0.1.6+0
  [12413925] + Xorg_xcb_util_image_jll v0.4.1+0
  [2def613f] + Xorg_xcb_util_jll v0.4.1+0
  [975044d2] + Xorg_xcb_util_keysyms_jll v0.4.1+0
  [0d47668e] + Xorg_xcb_util_renderutil_jll v0.3.10+0
  [c22f9ab0] + Xorg_xcb_util_wm_jll v0.4.2+0
  [35661453] + Xorg_xkbcomp_jll v1.4.7+0
  [33bec58e] + Xorg_xkeyboard_config_jll v2.44.0+0
  [c5fb5394] + Xorg_xtrans_jll v1.6.0+0
  [35ca27e7] + eudev_jll v3.2.14+0
  [214eeab7] + fzf_jll v0.61.1+0
  [a4ae2306] + libaom_jll v3.13.1+0
  [0ac62f75] + libass_jll v0.17.4+0
  [1183f4f0] + libdecor_jll v0.2.2+0
  [2db6ffa8] + libevdev_jll v1.13.4+0
  [f638f0a6] + libfdk_aac_jll v2.0.4+0
  [36db933b] + libinput_jll v1.28.1+0
  [b53b4c65] + libpng_jll v1.6.50+0
  [f27f6e37] + libvorbis_jll v1.3.8+0
  [009596ad] + mtdev_jll v1.1.7+0
  [1317d2d5] + oneTBB_jll v2022.0.0+0
  [1270edf5] + x264_jll v10164.0.1+0
  [dfaa095f] + x265_jll v4.1.0+0
  [d8fb68d0] + xkbcommon_jll v1.9.2+0
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8ba89e20] + Distributed v1.11.0
  [f43a241f] + Downloads v1.7.0
  [7b1f6079] + FileWatching v1.11.0
  [9fa8497b] + Future v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [4af54fe1] + LazyArtifacts v1.11.0
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.13.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [44cfe95a] + Pkg v1.13.0
  [de0858da] + Printf v1.11.0
  [3fa0cd96] + REPL v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [1a1011a3] + SharedArrays v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [2f01184e] + SparseArrays v1.13.0
  [f489334b] + StyledStrings v1.11.0
  [4607b0f0] + SuiteSparse
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [8dfed614] + Test v1.11.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] + LibCURL_jll v8.16.0+0
  [e37daf67] + LibGit2_jll v1.9.1+0
  [29816b5a] + LibSSH2_jll v1.11.3+1
  [14a3606d] + MozillaCACerts_jll v2025.9.9
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [05823500] + OpenLibm_jll v0.8.7+0
  [458c3c95] + OpenSSL_jll v3.5.4+0
  [efcefdf7] + PCRE2_jll v10.46.0+0
  [bea87d4a] + SuiteSparse_jll v7.10.1+0
  [83775a58] + Zlib_jll v1.3.1+2
  [3161d3a3] + Zstd_jll v1.5.7+1
  [8e850b90] + libblastrampoline_jll v5.15.0+0
  [8e850ede] + nghttp2_jll v1.67.1+0
  [3f19e933] + p7zip_jll v17.6.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 7.66s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

┌ Warning: Could not use exact versions of packages in manifest, re-resolving
└ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:76
Precompiling package dependencies...

Precompilation completed after 63.11s


################################################################################
# Testing
#

     Testing MendelImpute
        Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function.
    Updating `/tmp/jl_5z6f85/Project.toml`
  [6e4b80f9] + BenchmarkTools v1.6.0
  [e47305d1] + MendelImpute v1.2.6
    Updating `/tmp/jl_5z6f85/Manifest.toml`
  [6e4b80f9] + BenchmarkTools v1.6.0
⌅ [682c06a0] ↓ JSON v1.1.0 ⇒ v0.21.4
  [e47305d1] + MendelImpute v1.2.6
  [ec057cc2] - StructUtils v2.5.1
  [9abbd945] + Profile v1.11.0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`
        Test Successfully re-resolved
      Status `/tmp/jl_5z6f85/Project.toml`
⌅ [6db4b851] BGEN v0.1.17
  [6e4b80f9] BenchmarkTools v1.6.0
  [336ed68f] CSV v0.10.15
  [a93c6f00] DataFrames v1.8.0
  [b4f34e82] Distances v0.10.12
  [5789e2e9] FileIO v1.17.1
  [53c48c17] FixedPointNumbers v0.8.5
  [d853e229] GroupSlices v0.0.3
⌅ [033835bb] JLD2 v0.4.54
  [9da8a3cd] JLSO v2.7.0
⌅ [5078a376] LazyArrays v1.10.0
  [e47305d1] MendelImpute v1.2.6
  [92933f4c] ProgressMeter v1.11.0
  [4e780e97] SnpArrays v0.3.22
  [276daf66] SpecialFunctions v2.6.1
  [10745b16] Statistics v1.11.1
  [2913bbd2] StatsBase v0.34.6
  [f3b207a7] StatsPlots v0.15.8
  [a620830f] VCFTools v0.2.10
  [28eba6e3] VariantCallFormat v0.5.7
  [37e2e46d] LinearAlgebra v1.13.0
  [9a3f8284] Random v1.11.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_5z6f85/Manifest.toml`
  [621f4979] AbstractFFTs v1.5.0
  [7d9f7c33] Accessors v0.1.42
  [79e6a3ab] Adapt v4.4.0
  [66dad0bd] AliasTables v1.1.3
  [7d9fca2a] Arpack v0.5.4
  [4fba245c] ArrayInterface v7.20.0
  [4c555306] ArrayLayouts v1.12.0
  [67c07d97] Automa v1.1.0
  [13072b0f] AxisAlgorithms v1.1.0
⌅ [6db4b851] BGEN v0.1.17
  [28d598bf] BGZFStreams v0.3.2
  [fbb218c0] BSON v0.3.9
  [6e4b80f9] BenchmarkTools v1.6.0
  [47718e42] BioGenerics v0.1.5
  [d1d4a3ce] BitFlags v0.1.9
  [62783981] BitTwiddlingConvenienceFunctions v0.1.6
  [e1450e63] BufferedStreams v1.2.2
  [2a0fbf3d] CPUSummary v0.2.7
  [336ed68f] CSV v0.10.15
  [d360d2e6] ChainRulesCore v1.26.0
  [fb6a15b2] CloseOpenIntervals v0.1.13
  [aaaa29a8] Clustering v0.15.8
  [523fee87] CodecBzip2 v0.8.5
  [ba30903b] CodecXz v0.7.4
  [944b1d66] CodecZlib v0.7.8
  [6b39b394] CodecZstd v0.8.6
  [35d6a980] ColorSchemes v3.31.0
  [3da002f7] ColorTypes v0.12.1
  [c3611d14] ColorVectorSpace v0.11.0
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⌅ [033835bb] JLD2 v0.4.54
  [1019f520] JLFzf v0.1.11
  [692b3bcd] JLLWrappers v1.7.1
  [9da8a3cd] JLSO v2.7.0
⌅ [682c06a0] JSON v0.21.4
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⌅ [5078a376] LazyArrays v1.10.0
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  [e6f89c97] LoggingExtras v1.2.0
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⌅ [a3b82374] MatrixFactorizations v2.2.0
  [739be429] MbedTLS v1.1.9
  [442fdcdd] Measures v0.3.2
  [f28f55f0] Memento v1.4.1
  [e47305d1] MendelImpute v1.2.6
  [e1d29d7a] Missings v1.2.0
  [6f286f6a] MultivariateStats v0.10.3
  [77ba4419] NaNMath v1.1.3
  [b8a86587] NearestNeighbors v0.4.22
  [510215fc] Observables v0.5.5
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  [bac558e1] OrderedCollections v1.8.1
  [90014a1f] PDMats v0.11.35
  [69de0a69] Parsers v2.8.3
  [ccf2f8ad] PlotThemes v3.3.0
  [995b91a9] PlotUtils v1.4.3
  [91a5bcdd] Plots v1.41.1
  [1d0040c9] PolyesterWeave v0.2.2
  [2dfb63ee] PooledArrays v1.4.3
  [aea7be01] PrecompileTools v1.3.3
  [21216c6a] Preferences v1.5.0
  [08abe8d2] PrettyTables v3.1.0
  [92933f4c] ProgressMeter v1.11.0
  [43287f4e] PtrArrays v1.3.0
  [1fd47b50] QuadGK v2.11.2
  [c84ed2f1] Ratios v0.4.5
  [3cdcf5f2] RecipesBase v1.3.4
  [01d81517] RecipesPipeline v0.6.12
  [189a3867] Reexport v1.2.2
  [05181044] RelocatableFolders v1.0.1
  [ae029012] Requires v1.3.1
  [79098fc4] Rmath v0.8.0
  [f2b01f46] Roots v2.2.10
  [fdea26ae] SIMD v3.7.2
  [94e857df] SIMDTypes v0.1.0
  [476501e8] SLEEFPirates v0.6.43
  [0aa819cd] SQLite v1.6.1
  [431bcebd] SciMLPublic v1.0.0
  [6c6a2e73] Scratch v1.3.0
  [91c51154] SentinelArrays v1.4.8
  [992d4aef] Showoff v1.0.3
  [777ac1f9] SimpleBufferStream v1.2.0
  [4e780e97] SnpArrays v0.3.22
  [a2af1166] SortingAlgorithms v1.2.2
  [276daf66] SpecialFunctions v2.6.1
  [860ef19b] StableRNGs v1.0.3
  [aedffcd0] Static v1.3.0
  [0d7ed370] StaticArrayInterface v1.8.0
  [90137ffa] StaticArrays v1.9.15
  [1e83bf80] StaticArraysCore v1.4.3
  [10745b16] Statistics v1.11.1
  [82ae8749] StatsAPI v1.7.1
  [2913bbd2] StatsBase v0.34.6
  [4c63d2b9] StatsFuns v1.5.0
  [f3b207a7] StatsPlots v0.15.8
  [892a3eda] StringManipulation v0.4.1
  [ab02a1b2] TableOperations v1.2.0
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.12.1
  [62fd8b95] TensorCore v0.1.1
  [8290d209] ThreadingUtilities v0.5.5
⌅ [3bb67fe8] TranscodingStreams v0.9.13
  [5c2747f8] URIs v1.6.1
  [3a884ed6] UnPack v1.0.2
  [1cfade01] UnicodeFun v0.4.1
  [41fe7b60] Unzip v0.2.0
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  [3d5dd08c] VectorizationBase v0.21.72
  [ea10d353] WeakRefStrings v1.4.2
  [cc8bc4a8] Widgets v0.6.7
  [efce3f68] WoodburyMatrices v1.0.0
  [76eceee3] WorkerUtilities v1.6.1
⌅ [68821587] Arpack_jll v3.5.1+1
  [6e34b625] Bzip2_jll v1.0.9+0
  [83423d85] Cairo_jll v1.18.5+0
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  [2702e6a9] EpollShim_jll v0.0.20230411+1
  [2e619515] Expat_jll v2.7.1+0
  [b22a6f82] FFMPEG_jll v7.1.1+0
  [f5851436] FFTW_jll v3.3.11+0
  [a3f928ae] Fontconfig_jll v2.17.1+0
  [d7e528f0] FreeType2_jll v2.13.4+0
  [559328eb] FriBidi_jll v1.0.17+0
  [0656b61e] GLFW_jll v3.4.0+2
  [d2c73de3] GR_jll v0.73.17+0
  [b0724c58] GettextRuntime_jll v0.22.4+0
  [61579ee1] Ghostscript_jll v9.55.1+0
  [7746bdde] Glib_jll v2.86.0+0
  [3b182d85] Graphite2_jll v1.3.15+0
  [2e76f6c2] HarfBuzz_jll v8.5.1+0
  [1d5cc7b8] IntelOpenMP_jll v2025.2.0+0
  [aacddb02] JpegTurbo_jll v3.1.3+0
  [c1c5ebd0] LAME_jll v3.100.3+0
  [88015f11] LERC_jll v4.0.1+0
  [1d63c593] LLVMOpenMP_jll v18.1.8+0
  [dd4b983a] LZO_jll v2.10.3+0
  [e9f186c6] Libffi_jll v3.4.7+0
  [7e76a0d4] Libglvnd_jll v1.7.1+1
  [94ce4f54] Libiconv_jll v1.18.0+0
  [4b2f31a3] Libmount_jll v2.41.2+0
  [89763e89] Libtiff_jll v4.7.2+0
  [38a345b3] Libuuid_jll v2.41.2+0
  [856f044c] MKL_jll v2025.2.0+0
  [c8ffd9c3] MbedTLS_jll v2.28.10+0
  [e7412a2a] Ogg_jll v1.3.6+0
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
  [91d4177d] Opus_jll v1.5.2+0
  [36c8627f] Pango_jll v1.56.4+0
⌅ [30392449] Pixman_jll v0.44.2+0
  [c0090381] Qt6Base_jll v6.8.2+2
  [629bc702] Qt6Declarative_jll v6.8.2+1
  [ce943373] Qt6ShaderTools_jll v6.8.2+1
  [e99dba38] Qt6Wayland_jll v6.8.2+2
  [f50d1b31] Rmath_jll v0.5.1+0
  [76ed43ae] SQLite_jll v3.48.0+0
  [a44049a8] Vulkan_Loader_jll v1.3.243+0
  [a2964d1f] Wayland_jll v1.24.0+0
  [ffd25f8a] XZ_jll v5.8.1+0
  [f67eecfb] Xorg_libICE_jll v1.1.2+0
  [c834827a] Xorg_libSM_jll v1.2.6+0
  [4f6342f7] Xorg_libX11_jll v1.8.12+0
  [0c0b7dd1] Xorg_libXau_jll v1.0.13+0
  [935fb764] Xorg_libXcursor_jll v1.2.4+0
  [a3789734] Xorg_libXdmcp_jll v1.1.6+0
  [1082639a] Xorg_libXext_jll v1.3.7+0
  [d091e8ba] Xorg_libXfixes_jll v6.0.2+0
  [a51aa0fd] Xorg_libXi_jll v1.8.3+0
  [d1454406] Xorg_libXinerama_jll v1.1.6+0
  [ec84b674] Xorg_libXrandr_jll v1.5.5+0
  [ea2f1a96] Xorg_libXrender_jll v0.9.12+0
  [c7cfdc94] Xorg_libxcb_jll v1.17.1+0
  [cc61e674] Xorg_libxkbfile_jll v1.1.3+0
  [e920d4aa] Xorg_xcb_util_cursor_jll v0.1.6+0
  [12413925] Xorg_xcb_util_image_jll v0.4.1+0
  [2def613f] Xorg_xcb_util_jll v0.4.1+0
  [975044d2] Xorg_xcb_util_keysyms_jll v0.4.1+0
  [0d47668e] Xorg_xcb_util_renderutil_jll v0.3.10+0
  [c22f9ab0] Xorg_xcb_util_wm_jll v0.4.2+0
  [35661453] Xorg_xkbcomp_jll v1.4.7+0
  [33bec58e] Xorg_xkeyboard_config_jll v2.44.0+0
  [c5fb5394] Xorg_xtrans_jll v1.6.0+0
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  [0ac62f75] libass_jll v0.17.4+0
  [1183f4f0] libdecor_jll v0.2.2+0
  [2db6ffa8] libevdev_jll v1.13.4+0
  [f638f0a6] libfdk_aac_jll v2.0.4+0
  [36db933b] libinput_jll v1.28.1+0
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  [8f399da3] Libdl v1.11.0
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  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [a63ad114] Mmap v1.11.0
  [ca575930] NetworkOptions v1.3.0
  [44cfe95a] Pkg v1.13.0
  [de0858da] Printf v1.11.0
  [9abbd945] Profile v1.11.0
  [3fa0cd96] REPL v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [1a1011a3] SharedArrays v1.11.0
  [6462fe0b] Sockets v1.11.0
  [2f01184e] SparseArrays v1.13.0
  [f489334b] StyledStrings v1.11.0
  [4607b0f0] SuiteSparse
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] LibCURL_jll v8.16.0+0
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  [29816b5a] LibSSH2_jll v1.11.3+1
  [14a3606d] MozillaCACerts_jll v2025.9.9
  [4536629a] OpenBLAS_jll v0.3.29+0
  [05823500] OpenLibm_jll v0.8.7+0
  [458c3c95] OpenSSL_jll v3.5.4+0
  [efcefdf7] PCRE2_jll v10.46.0+0
  [bea87d4a] SuiteSparse_jll v7.10.1+0
  [83775a58] Zlib_jll v1.3.1+2
  [3161d3a3] Zstd_jll v1.5.7+1
  [8e850b90] libblastrampoline_jll v5.15.0+0
  [8e850ede] nghttp2_jll v1.67.1+0
  [3f19e933] p7zip_jll v17.6.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
ERROR: LoadError: invalid assignment to constant SnpArrays.AbstractSnpArray. This redefinition may be permitted using the `const` keyword.
Stacktrace:
  [1] top-level scope
    @ ~/.julia/packages/SnpArrays/CSYLc/src/SnpArrays.jl:48
  [2] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
  [3] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2777
  [4] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2536
  [5] macro expansion
    @ ./loading.jl:2464 [inlined]
  [6] macro expansion
    @ ./lock.jl:376 [inlined]
  [7] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2428
  [8] require
    @ ./loading.jl:2404 [inlined]
  [9] eval_import_path
    @ ./module.jl:36 [inlined]
 [10] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base ./module.jl:60
 [11] _eval_using(to::Module, path::Expr)
    @ Base ./module.jl:137
 [12] top-level scope
    @ ~/.julia/packages/MendelImpute/z2M6N/src/MendelImpute.jl:5
 [13] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [14] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2777
 [15] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2536
 [16] macro expansion
    @ ./loading.jl:2464 [inlined]
 [17] macro expansion
    @ ./lock.jl:376 [inlined]
 [18] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2428
 [19] require
    @ ./loading.jl:2404 [inlined]
 [20] eval_import_path
    @ ./module.jl:36 [inlined]
 [21] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base ./module.jl:60
 [22] _eval_using(to::Module, path::Expr)
    @ Base ./module.jl:137
 [23] top-level scope
    @ ~/.julia/packages/MendelImpute/z2M6N/test/runtests.jl:1
 [24] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:310
 [25] top-level scope
    @ none:6
 [26] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [27] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:310
 [28] _start()
    @ Base ./client.jl:577
in expression starting at /home/pkgeval/.julia/packages/SnpArrays/CSYLc/src/SnpArrays.jl:3
in expression starting at /home/pkgeval/.julia/packages/MendelImpute/z2M6N/src/MendelImpute.jl:1
in expression starting at /home/pkgeval/.julia/packages/MendelImpute/z2M6N/test/runtests.jl:1

Testing failed after 167.86s

ERROR: LoadError: Package MendelImpute errored during testing
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2674
  [3] test
    @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2523 [inlined]
  [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:548
  [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:525
  [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:172
  [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:161
  [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:160
  [9] test
    @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:160 [inlined]
 [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String)
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:159
 [11] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:219
 [12] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [13] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:344
 [14] _start()
    @ Base ./client.jl:577
in expression starting at /PkgEval.jl/scripts/evaluate.jl:210

PkgEval failed after 269.81s: package tests unexpectedly errored