Package evaluation of SparseDiffTools on Julia 1.13.0-DEV.1277 (fa66b63fc3*) started at 2025-10-08T03:44:31.636 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.61s ################################################################################ # Installation # Installing SparseDiffTools... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [47a9eef4] + SparseDiffTools v2.26.0 Updating `~/.julia/environments/v1.13/Manifest.toml` [47edcb42] + ADTypes v1.18.0 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.4.0 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.20.0 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.6.0 ⌅ [864edb3b] + DataStructures v0.18.22 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [ffbed154] + DocStringExtensions v0.9.5 [6a86dc24] + FiniteDiff v2.28.1 [f6369f11] + ForwardDiff v1.2.1 [86223c79] + Graphs v1.13.1 [615f187c] + IfElse v0.1.1 [d25df0c9] + Inflate v0.1.5 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.4 [692b3bcd] + JLLWrappers v1.7.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [77ba4419] + NaNMath v1.1.3 [bac558e1] + OrderedCollections v1.8.1 [65ce6f38] + PackageExtensionCompat v1.0.2 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 ⌅ [c0aeaf25] + SciMLOperators v0.4.0 [431bcebd] + SciMLPublic v1.0.0 [efcf1570] + Setfield v1.1.2 [699a6c99] + SimpleTraits v0.9.5 [47a9eef4] + SparseDiffTools v2.26.0 [276daf66] + SpecialFunctions v2.6.1 [aedffcd0] + Static v1.3.0 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [3a884ed6] + UnPack v1.0.2 [19fa3120] + VertexSafeGraphs v0.2.0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.15.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 6.16s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 5224.7 ms ✓ TestEnv 1 dependency successfully precompiled in 6 seconds. 27 already precompiled. Precompiling package dependencies... Precompilation completed after 296.45s ################################################################################ # Testing # Testing SparseDiffTools Status `/tmp/jl_nGQmmd/Project.toml` [47edcb42] ADTypes v1.18.0 [79e6a3ab] Adapt v4.4.0 [9b6a8646] AllocCheck v0.2.2 [4fba245c] ArrayInterface v7.20.0 [aae01518] BandedMatrices v1.9.5 [ffab5731] BlockBandedMatrices v0.13.4 [34da2185] Compat v4.18.1 ⌅ [864edb3b] DataStructures v0.18.22 [7da242da] Enzyme v0.13.85 [6a86dc24] FiniteDiff v2.28.1 [f6369f11] ForwardDiff v1.2.1 [86223c79] Graphs v1.13.1 [42fd0dbc] IterativeSolvers v0.9.4 [65ce6f38] PackageExtensionCompat v1.0.2 [98d1487c] PolyesterForwardDiff v0.1.3 [189a3867] Reexport v1.2.2 [1bc83da4] SafeTestsets v0.1.0 ⌅ [c0aeaf25] SciMLOperators v0.4.0 [efcf1570] Setfield v1.1.2 [47a9eef4] SparseDiffTools v2.26.0 [0d7ed370] StaticArrayInterface v1.8.0 [90137ffa] StaticArrays v1.9.15 [0c5d862f] Symbolics v6.55.0 [3a884ed6] UnPack v1.0.2 [19fa3120] VertexSafeGraphs v0.2.0 [e88e6eb3] Zygote v0.7.10 [37e2e46d] LinearAlgebra v1.13.0 [44cfe95a] Pkg v1.13.0 [9a3f8284] Random v1.11.0 [2f01184e] SparseArrays v1.13.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_nGQmmd/Manifest.toml` [47edcb42] ADTypes v1.18.0 [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [9b6a8646] AllocCheck v0.2.2 [ec485272] ArnoldiMethod v0.4.0 [4fba245c] ArrayInterface v7.20.0 [4c555306] ArrayLayouts v1.12.0 [aae01518] BandedMatrices v1.9.5 [e2ed5e7c] Bijections v0.2.2 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [8e7c35d0] BlockArrays v1.7.2 [ffab5731] BlockBandedMatrices v0.13.4 [fa961155] CEnum v0.5.0 [2a0fbf3d] CPUSummary v0.2.7 [082447d4] ChainRules v1.72.6 [d360d2e6] ChainRulesCore v1.26.0 [fb6a15b2] CloseOpenIntervals v0.1.13 ⌅ [861a8166] Combinatorics v1.0.2 [38540f10] CommonSolve v0.2.4 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.1 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v1.5.0 [27ebfcd6] Primes v0.5.7 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [c1ae055f] RealDot v0.1.0 [3cdcf5f2] RecipesBase v1.3.4 [731186ca] RecursiveArrayTools v3.37.1 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.8.0 [7e49a35a] RuntimeGeneratedFunctions v0.5.15 [94e857df] SIMDTypes v0.1.0 [1bc83da4] SafeTestsets v0.1.0 ⌃ [0bca4576] SciMLBase v2.99.0 ⌅ [c0aeaf25] SciMLOperators v0.4.0 [431bcebd] SciMLPublic v1.0.0 [53ae85a6] SciMLStructures v1.7.0 [6c6a2e73] Scratch v1.3.0 [efcf1570] Setfield v1.1.2 [699a6c99] SimpleTraits v0.9.5 [a2af1166] SortingAlgorithms v1.2.2 [47a9eef4] SparseDiffTools v2.26.0 [dc90abb0] SparseInverseSubset v0.1.2 [276daf66] SpecialFunctions v2.6.1 [aedffcd0] Static v1.3.0 [0d7ed370] StaticArrayInterface v1.8.0 [90137ffa] StaticArrays v1.9.15 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.6 [4c63d2b9] StatsFuns v1.5.0 [7792a7ef] StrideArraysCore v0.5.8 [09ab397b] StructArrays v0.7.1 [53d494c1] StructIO v0.3.1 [2efcf032] SymbolicIndexingInterface v0.3.45 ⌃ [19f23fe9] SymbolicLimits v0.2.3 ⌅ [d1185830] SymbolicUtils v3.32.0 [0c5d862f] Symbolics v6.55.0 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [ed4db957] TaskLocalValues v0.1.3 [8ea1fca8] TermInterface v2.0.0 [8290d209] ThreadingUtilities v0.5.5 [a759f4b9] TimerOutputs v0.5.29 [e689c965] Tracy v0.1.6 [3a884ed6] UnPack v1.0.2 [a7c27f48] Unityper v0.1.6 [19fa3120] VertexSafeGraphs v0.2.0 [e88e6eb3] Zygote v0.7.10 [700de1a5] ZygoteRules v0.2.7 [7cc45869] Enzyme_jll v0.0.203+0 [61579ee1] Ghostscript_jll v9.55.1+0 [aacddb02] JpegTurbo_jll v3.1.3+0 [dad2f222] LLVMExtra_jll v0.0.37+2 [ad6e5548] LibTracyClient_jll v0.9.1+6 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.16.0+0 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.9.9 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.4+0 [efcefdf7] PCRE2_jll v10.46.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.15.0+0 [8e850ede] nghttp2_jll v1.67.1+0 [3f19e933] p7zip_jll v17.6.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Test Summary: | Pass Total Time Exact coloring via contraction | 20 20 21.0s 22.975300 seconds (6.42 M allocations: 408.853 MiB, 1.49% gc time, 37.42% compilation time: <1% of which was recompilation) Test Summary: | Pass Total Time Greedy distance-1 coloring | 20 20 0.5s 0.466795 seconds (122.38 k allocations: 6.637 MiB, 93.64% compilation time) Test Summary: | Pass Total Time Greedy star coloring | 812 812 1.5s 1.470004 seconds (371.03 k allocations: 19.824 MiB, 97.03% compilation time) Test Summary: | Pass Total Time Acyclic coloring | 1563162 1563162 12.1s 12.089439 seconds (55.76 M allocations: 2.687 GiB, 13.45% gc time, 27.27% compilation time) ┌ Warning: Assignment to `n` in soft scope is ambiguous because a global variable by the same name exists: `n` will be treated as a new local. Disambiguate by using `local n` to suppress this warning or `global n` to assign to the existing global variable. └ @ ~/.julia/packages/SparseDiffTools/TukJJ/test/test_matrix2graph.jl:11 [ Info: stored zeros Test Summary: | Pass Total Time Matrix to graph conversion | 137414 137414 4.9s 4.913594 seconds (5.70 M allocations: 486.210 MiB, 2.64% gc time, 71.93% compilation time: 6% of which was recompilation) Test Summary: | Pass Total Time Hessian colorvecs | 100 100 3m47.6s 227.601326 seconds (47.07 M allocations: 2.615 GiB, 0.57% gc time, 36.53% compilation time: 45% of which was recompilation) Test Summary: | Pass Total Time Integration test | 7 7 12.3s 12.307938 seconds (7.66 M allocations: 402.367 MiB, 0.82% gc time, 99.56% compilation time: 1% of which was recompilation) Test Summary: | Pass Total Time Special matrices | 88 88 53.3s 53.354920 seconds (13.64 M allocations: 842.334 MiB, 0.66% gc time, 61.36% compilation time: 38% of which was recompilation) [ Info: ended definitions [ Info: second passed [ Info: third passed [ Info: 4th passed ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 157 running 1 of 1 signal (10): User defined signal 1 __libc_free at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x35cea40f) at (unknown file) unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1217 wait_forever at ./task.jl:1139 jfptr_wait_forever_55536.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] start_task at /source/src/task.c:1281 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000078a43bcdc4c0 Total snapshots: 413. Utilization: 0% ╎413 @Base/task.jl:1139 wait_forever() 412╎ 413 @Base/task.jl:1217 wait() [157] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/SparseDiffTools/TukJJ/test/test_ad.jl:142 _M_lower_bound at /usr/local/x86_64-linux-gnu/include/c++/9.1.0/bits/stl_tree.h:1924 [inlined] lower_bound at /usr/local/x86_64-linux-gnu/include/c++/9.1.0/bits/stl_tree.h:1278 [inlined] lower_bound at /usr/local/x86_64-linux-gnu/include/c++/9.1.0/bits/stl_map.h:1258 [inlined] operator[] at /usr/local/x86_64-linux-gnu/include/c++/9.1.0/bits/stl_map.h:515 [inlined] AddInPredecessorLiveOuts at /source/src/llvm-late-gc-lowering.cpp:2341 [inlined] PlaceGCFrameStores at /source/src/llvm-late-gc-lowering.cpp:2413 PlaceRootsAndUpdateCalls at /source/src/llvm-late-gc-lowering.cpp:2566 runOnFunction at /source/src/llvm-late-gc-lowering.cpp:2601 run at /source/src/llvm-late-gc-lowering.cpp:2642 run at /source/usr/include/llvm/IR/PassManagerInternal.h:91 _ZN4llvm11PassManagerINS_8FunctionENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:91 _ZN4llvm27ModuleToFunctionPassAdaptor3runERNS_6ModuleERNS_15AnalysisManagerIS1_JEEE at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/usr/include/llvm/IR/PassManagerInternal.h:91 _ZN4llvm11PassManagerINS_6ModuleENS_15AnalysisManagerIS1_JEEEJEE3runERS1_RS3_ at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) run at /source/src/pipeline.cpp:791 operator() at /source/src/jitlayers.cpp:1513 withModuleDo<(anonymous namespace)::sizedOptimizerT::operator()(llvm::orc::ThreadSafeModule) [with long unsigned int N = 4]:: > at /source/usr/include/llvm/ExecutionEngine/Orc/ThreadSafeModule.h:136 [inlined] operator() at /source/src/jitlayers.cpp:1474 [inlined] operator() at /source/src/jitlayers.cpp:1649 [inlined] addModule at /source/src/jitlayers.cpp:2106 jl_compile_codeinst_now at /source/src/jitlayers.cpp:682 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:876 PkgEval terminated after 2725.87s: test duration exceeded the time limit