Package evaluation of ComradeBase on Julia 1.13.0-DEV.1277 (fa66b63fc3*) started at 2025-10-07T23:37:34.634


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 10.64s


################################################################################
# Installation
#

Installing ComradeBase...
   Resolving package versions...
    Updating `~/.julia/environments/v1.13/Project.toml`
  [6d8c423b] + ComradeBase v0.9.4
    Updating `~/.julia/environments/v1.13/Manifest.toml`
  [7d9f7c33] + Accessors v0.1.42
  [79e6a3ab] + Adapt v4.4.0
  [4fba245c] + ArrayInterface v7.20.0
  [d360d2e6] + ChainRulesCore v1.26.0
  [34da2185] + Compat v4.18.1
  [a33af91c] + CompositionsBase v0.1.2
  [6d8c423b] + ComradeBase v0.9.4
  [187b0558] + ConstructionBase v1.6.0
  [9a962f9c] + DataAPI v1.16.0
  [e2d170a0] + DataValueInterfaces v1.0.0
  [0703355e] + DimensionalData v0.29.24
  [ffbed154] + DocStringExtensions v0.9.5
  [f151be2c] + EnzymeCore v0.8.14
  [411431e0] + Extents v0.1.6
  [85a1e053] + Interfaces v0.3.2
  [8197267c] + IntervalSets v0.7.11
  [3587e190] + InverseFunctions v0.1.17
  [41ab1584] + InvertedIndices v1.3.1
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [1914dd2f] + MacroTools v0.5.16
  [bac558e1] + OrderedCollections v1.8.1
  [d3c5d4cd] + PolarizedTypes v0.1.2
  [aea7be01] + PrecompileTools v1.3.3
  [21216c6a] + Preferences v1.5.0
  [3cdcf5f2] + RecipesBase v1.3.4
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.1
  [90137ffa] + StaticArrays v1.9.15
  [1e83bf80] + StaticArraysCore v1.4.3
  [10745b16] + Statistics v1.11.1
  [09ab397b] + StructArrays v0.7.1
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.1
  [56f22d72] + Artifacts v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.13.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [fa267f1f] + TOML v1.0.3
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [8e850b90] + libblastrampoline_jll v5.15.0+0

Installation completed after 5.42s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...
Precompiling packages...
   5225.5 ms  ✓ TestEnv
  1 dependency successfully precompiled in 6 seconds. 27 already precompiled.

Precompiling package dependencies...

Precompilation completed after 629.47s


################################################################################
# Testing
#

     Testing ComradeBase
      Status `/tmp/jl_e1fnRp/Project.toml`
  [7d9f7c33] Accessors v0.1.42
  [79e6a3ab] Adapt v4.4.0
  [cdddcdb0] ChainRulesTestUtils v1.13.1
  [6d8c423b] ComradeBase v0.9.4
  [0703355e] DimensionalData v0.29.24
  [ffbed154] DocStringExtensions v0.9.5
  [7da242da] Enzyme v0.13.85
  [f151be2c] EnzymeCore v0.8.14
  [26cc04aa] FiniteDifferences v0.12.33
  [c3a54625] JET v0.10.8
  [63c18a36] KernelAbstractions v0.9.38
  [67456a42] OhMyThreads v0.8.3
  [d3c5d4cd] PolarizedTypes v0.1.2
  [f517fe37] Polyester v0.7.18
  [aea7be01] PrecompileTools v1.3.3
  [3d61700d] Pyehtim v0.2.2
  [189a3867] Reexport v1.2.2
  [90137ffa] StaticArrays v1.9.15
  [09ab397b] StructArrays v0.7.1
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_e1fnRp/Manifest.toml`
  [7d9f7c33] Accessors v0.1.42
  [79e6a3ab] Adapt v4.4.0
  [4fba245c] ArrayInterface v7.20.0
  [a9b6321e] Atomix v1.1.2
  [198e06fe] BangBang v0.4.4
  [62783981] BitTwiddlingConvenienceFunctions v0.1.6
  [fa961155] CEnum v0.5.0
  [2a0fbf3d] CPUSummary v0.2.7
  [d360d2e6] ChainRulesCore v1.26.0
  [cdddcdb0] ChainRulesTestUtils v1.13.1
  [ae650224] ChunkSplitters v3.1.2
  [fb6a15b2] CloseOpenIntervals v0.1.13
  [da1fd8a2] CodeTracking v2.0.1
  [f70d9fcc] CommonWorldInvalidations v1.0.0
  [34da2185] Compat v4.18.1
  [807dbc54] Compiler v0.1.1
  [a33af91c] CompositionsBase v0.1.2
  [6d8c423b] ComradeBase v0.9.4
  [992eb4ea] CondaPkg v0.2.33
  [187b0558] ConstructionBase v1.6.0
  [adafc99b] CpuId v0.3.1
  [9a962f9c] DataAPI v1.16.0
  [e2d170a0] DataValueInterfaces v1.0.0
  [0703355e] DimensionalData v0.29.24
  [ffbed154] DocStringExtensions v0.9.5
  [7da242da] Enzyme v0.13.85
  [f151be2c] EnzymeCore v0.8.14
  [e2ba6199] ExprTools v0.1.10
  [411431e0] Extents v0.1.6
  [26cc04aa] FiniteDifferences v0.12.33
  [61eb1bfa] GPUCompiler v1.7.0
  [076d061b] HashArrayMappedTries v0.2.0
  [615f187c] IfElse v0.1.1
  [22cec73e] InitialValues v0.3.1
  [85a1e053] Interfaces v0.3.2
  [8197267c] IntervalSets v0.7.11
  [3587e190] InverseFunctions v0.1.17
  [41ab1584] InvertedIndices v1.3.1
  [82899510] IteratorInterfaceExtensions v1.0.0
  [c3a54625] JET v0.10.8
  [692b3bcd] JLLWrappers v1.7.1
  [0f8b85d8] JSON3 v1.14.3
  [aa1ae85d] JuliaInterpreter v0.10.5
  [70703baa] JuliaSyntax v1.0.2
  [63c18a36] KernelAbstractions v0.9.38
  [929cbde3] LLVM v9.4.3
  [10f19ff3] LayoutPointers v0.1.17
  [6f1432cf] LoweredCodeUtils v3.4.4
  [1914dd2f] MacroTools v0.5.16
  [d125e4d3] ManualMemory v0.1.8
  [0b3b1443] MicroMamba v0.1.14
  [d8793406] ObjectFile v0.5.0
  [67456a42] OhMyThreads v0.8.3
  [bac558e1] OrderedCollections v1.8.1
  [69de0a69] Parsers v2.8.3
  [fa939f87] Pidfile v1.3.0
  [d3c5d4cd] PolarizedTypes v0.1.2
  [f517fe37] Polyester v0.7.18
  [1d0040c9] PolyesterWeave v0.2.2
  [aea7be01] PrecompileTools v1.3.3
  [21216c6a] Preferences v1.5.0
  [3d61700d] Pyehtim v0.2.2
  [6099a3de] PythonCall v0.9.28
  [3cdcf5f2] RecipesBase v1.3.4
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.1
  [708f8203] Richardson v1.4.2
  [94e857df] SIMDTypes v0.1.0
  [431bcebd] SciMLPublic v1.0.0
  [7e506255] ScopedValues v1.5.0
  [6c6a2e73] Scratch v1.3.0
  [91464d47] StableTasks v0.1.7
  [aedffcd0] Static v1.3.0
  [0d7ed370] StaticArrayInterface v1.8.0
  [90137ffa] StaticArrays v1.9.15
  [1e83bf80] StaticArraysCore v1.4.3
  [10745b16] Statistics v1.11.1
  [7792a7ef] StrideArraysCore v0.5.8
  [09ab397b] StructArrays v0.7.1
  [53d494c1] StructIO v0.3.1
  [856f2bd8] StructTypes v1.11.0
  [fd094767] Suppressor v0.2.8
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.12.1
  [ed4db957] TaskLocalValues v0.1.3
  [8290d209] ThreadingUtilities v0.5.5
  [e689c965] Tracy v0.1.6
  [013be700] UnsafeAtomics v0.3.0
  [e17b2a0c] UnsafePointers v1.0.0
  [7cc45869] Enzyme_jll v0.0.203+0
  [dad2f222] LLVMExtra_jll v0.0.37+2
  [ad6e5548] LibTracyClient_jll v0.9.1+6
⌅ [f8abcde7] micromamba_jll v1.5.12+0
  [4d7b5844] pixi_jll v0.41.3+0
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [f43a241f] Downloads v1.7.0
  [7b1f6079] FileWatching v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0
  [4af54fe1] LazyArtifacts v1.11.0
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.13.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [a63ad114] Mmap v1.11.0
  [ca575930] NetworkOptions v1.3.0
  [44cfe95a] Pkg v1.13.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [2f01184e] SparseArrays v1.13.0
  [f489334b] StyledStrings v1.11.0
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] LibCURL_jll v8.16.0+0
  [e37daf67] LibGit2_jll v1.9.1+0
  [29816b5a] LibSSH2_jll v1.11.3+1
  [14a3606d] MozillaCACerts_jll v2025.9.9
  [4536629a] OpenBLAS_jll v0.3.29+0
  [458c3c95] OpenSSL_jll v3.5.4+0
  [efcefdf7] PCRE2_jll v10.46.0+0
  [bea87d4a] SuiteSparse_jll v7.10.1+0
  [83775a58] Zlib_jll v1.3.1+2
  [3161d3a3] Zstd_jll v1.5.7+1
  [8e850b90] libblastrampoline_jll v5.15.0+0
  [8e850ede] nghttp2_jll v1.67.1+0
  [3f19e933] p7zip_jll v17.6.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
/tmp/jl_e1fnRp/.CondaPkg/.pixi/envs/default/lib/python3.10/site-packages/ehtim/__init__.py:58: UserWarning: pkg_resources is deprecated as an API. See https://setuptools.pypa.io/en/latest/pkg_resources.html. The pkg_resources package is slated for removal as early as 2025-11-30. Refrain from using this package or pin to Setuptools<81.
  import pkg_resources
ERROR: LoadError: InitError: UndefVarError: `libEnzyme` not defined in `Enzyme.API`
Suggestion: check for spelling errors or missing imports.
Stacktrace:
  [1] __init__()
    @ Enzyme.API ~/.julia/packages/Enzyme/HHfOL/src/api.jl:1413
  [2] run_module_init(mod::Module, i::Int64)
    @ Base ./loading.jl:1418
  [3] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String)
    @ Base ./loading.jl:1406
  [4] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}; register::Bool)
    @ Base ./loading.jl:1294
  [5] _include_from_serialized
    @ ./loading.jl:1251 [inlined]
  [6] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128, stalecheck::Bool; reasons::Dict{String, Int64}, DEPOT_PATH::Vector{String})
    @ Base ./loading.jl:2126
  [7] _require_search_from_serialized
    @ ./loading.jl:2020 [inlined]
  [8] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2670
  [9] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2536
 [10] macro expansion
    @ ./loading.jl:2464 [inlined]
 [11] macro expansion
    @ ./lock.jl:376 [inlined]
 [12] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2428
 [13] require
    @ ./loading.jl:2404 [inlined]
 [14] eval_import_path
    @ ./module.jl:36 [inlined]
 [15] eval_import_path_all(at::Module, path::Expr, keyword::String)
    @ Base ./module.jl:60
 [16] _eval_using(to::Module, path::Expr)
    @ Base ./module.jl:137
 [17] top-level scope
    @ ~/.julia/packages/ComradeBase/fQVUc/test/runtests.jl:6
 [18] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:310
 [19] top-level scope
    @ none:6
 [20] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [21] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:310
 [22] _start()
    @ Base ./client.jl:577
during initialization of module API
in expression starting at /home/pkgeval/.julia/packages/ComradeBase/fQVUc/test/runtests.jl:6
Warning: No NFFT installed!
Welcome to eht-imaging! v 1.2.10 


Testing failed after 232.25s

ERROR: LoadError: Package ComradeBase errored during testing
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2673
  [3] test
    @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2522 [inlined]
  [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:538
  [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:515
  [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:168
  [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:157
  [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156
  [9] test
    @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [inlined]
 [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String)
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:155
 [11] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:219
 [12] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [13] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:344
 [14] _start()
    @ Base ./client.jl:577
in expression starting at /PkgEval.jl/scripts/evaluate.jl:210

PkgEval failed after 1376.44s: package tests unexpectedly errored