Package evaluation of SIRIUS on Julia 1.13.0-DEV.1265 (cd62cf9a08*) started at 2025-10-05T17:16:16.629


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 10.48s


################################################################################
# Installation
#

Installing SIRIUS...
   Resolving package versions...
   Installed libaec_jll ──────────── v1.1.4+0
   Installed MicrosoftMPI_jll ────── v10.1.4+3
   Installed MPICH_jll ───────────── v4.3.1+0
   Installed spglib_jll ──────────── v2.6.0+0
   Installed MPI ─────────────────── v0.20.23
   Installed PkgVersion ──────────── v0.3.3
   Installed pugixml_jll ─────────── v1.15.0+0
   Installed Xorg_libpciaccess_jll ─ v0.18.1+0
   Installed COSTA_jll ───────────── v2.2.2+0
   Installed Requires ────────────── v1.3.1
   Installed HDF5_jll ────────────── v1.14.3+3
   Installed PrecompileTools ─────── v1.3.3
   Installed JSON3 ───────────────── v1.14.3
   Installed Libxc_jll ───────────── v7.0.0+2
   Installed OpenMPI_jll ─────────── v4.1.8+1
   Installed OpenBLAS32_jll ──────── v0.3.29+0
   Installed XML2_jll ────────────── v2.13.9+0
   Installed Hwloc_jll ───────────── v2.12.2+0
   Installed Parsers ─────────────── v2.8.3
   Installed SpFFT_jll ───────────── v1.1.0+0
   Installed MPIPreferences ──────── v0.1.11
   Installed FFTW_jll ────────────── v3.3.11+0
   Installed Preferences ─────────── v1.5.0
   Installed GSL_jll ─────────────── v2.7.2+0
   Installed SIRIUS_jll ──────────── v7.6.1+0
   Installed JLLWrappers ─────────── v1.7.1
   Installed LLVMOpenMP_jll ──────── v18.1.8+0
   Installed MPItrampoline_jll ───── v5.5.4+0
   Installed StructTypes ─────────── v1.11.0
   Installed Libiconv_jll ────────── v1.18.0+0
   Installed DocStringExtensions ─── v0.9.5
   Installed spla_jll ────────────── v1.6.1+0
   Installed OpenBLAS32 ──────────── v0.1.0
   Installed SIRIUS ──────────────── v0.1.0
  Installing 18 artifacts
   Installed artifact Xorg_libpciaccess 24.8 KiB
   Installed artifact LLVMOpenMP        661.6 KiB
   Installed artifact spla              132.0 KiB
   Installed artifact COSTA             164.8 KiB
   Installed artifact XML2              2.5 MiB
   Installed artifact spglib            267.1 KiB
   Installed artifact Hwloc             3.5 MiB
   Installed artifact GSL               4.4 MiB
   Installed artifact pugixml           110.8 KiB
   Installed artifact MPICH             3.3 MiB
   Installed artifact SpFFT             122.7 KiB
   Installed artifact libaec            49.6 KiB
   Installed artifact HDF5              5.3 MiB
   Installed artifact FFTW              2.2 MiB
   Installed artifact Libxc             7.0 MiB
   Installed artifact SIRIUS            3.3 MiB
   Installed artifact Libiconv          1.9 MiB
   Installed artifact OpenBLAS32        10.0 MiB
    Updating `~/.julia/environments/v1.13/Project.toml`
  [3581e6f0] + SIRIUS v0.1.0
    Updating `~/.julia/environments/v1.13/Manifest.toml`
  [ffbed154] + DocStringExtensions v0.9.5
  [692b3bcd] + JLLWrappers v1.7.1
  [0f8b85d8] + JSON3 v1.14.3
  [da04e1cc] + MPI v0.20.23
  [3da0fdf6] + MPIPreferences v0.1.11
  [51095b67] + OpenBLAS32 v0.1.0
  [69de0a69] + Parsers v2.8.3
  [eebad327] + PkgVersion v0.3.3
  [aea7be01] + PrecompileTools v1.3.3
  [21216c6a] + Preferences v1.5.0
  [ae029012] + Requires v1.3.1
  [3581e6f0] + SIRIUS v0.1.0
  [856f2bd8] + StructTypes v1.11.0
  [5f6e5a8a] + COSTA_jll v2.2.2+0
  [f5851436] + FFTW_jll v3.3.11+0
⌅ [1b77fbbe] + GSL_jll v2.7.2+0
⌅ [0234f1f7] + HDF5_jll v1.14.3+3
  [e33a78d0] + Hwloc_jll v2.12.2+0
  [1d63c593] + LLVMOpenMP_jll v18.1.8+0
  [94ce4f54] + Libiconv_jll v1.18.0+0
  [a56a6d9d] + Libxc_jll v7.0.0+2
  [7cb0a576] + MPICH_jll v4.3.1+0
  [f1f71cc9] + MPItrampoline_jll v5.5.4+0
  [9237b28f] + MicrosoftMPI_jll v10.1.4+3
  [656ef2d0] + OpenBLAS32_jll v0.3.29+0
⌅ [fe0851c0] + OpenMPI_jll v4.1.8+1
  [6b659922] + SIRIUS_jll v7.6.1+0
  [8be71ea8] + SpFFT_jll v1.1.0+0
⌅ [02c8fc9c] + XML2_jll v2.13.9+0
  [a65dc6b1] + Xorg_libpciaccess_jll v0.18.1+0
  [477f73a3] + libaec_jll v1.1.4+0
  [ef860afa] + pugixml_jll v1.15.0+0
  [ac4a9f1e] + spglib_jll v2.6.0+0
  [c0b6e1fa] + spla_jll v1.6.1+0
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8ba89e20] + Distributed v1.11.0
  [f43a241f] + Downloads v1.7.0
  [7b1f6079] + FileWatching v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [4af54fe1] + LazyArtifacts v1.11.0
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.13.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [44cfe95a] + Pkg v1.13.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [f489334b] + StyledStrings v1.11.0
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] + LibCURL_jll v8.16.0+0
  [e37daf67] + LibGit2_jll v1.9.1+0
  [29816b5a] + LibSSH2_jll v1.11.3+1
  [14a3606d] + MozillaCACerts_jll v2025.9.9
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [458c3c95] + OpenSSL_jll v3.5.4+0
  [efcefdf7] + PCRE2_jll v10.46.0+0
  [83775a58] + Zlib_jll v1.3.1+2
  [3161d3a3] + Zstd_jll v1.5.7+1
  [8e850b90] + libblastrampoline_jll v5.13.1+0
  [8e850ede] + nghttp2_jll v1.67.1+0
  [3f19e933] + p7zip_jll v17.6.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 19.46s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...
Precompiling packages...
   5147.9 ms  ✓ TestEnv
  1 dependency successfully precompiled in 6 seconds. 27 already precompiled.

Precompiling package dependencies...

Precompilation completed after 188.67s


################################################################################
# Testing
#

     Testing SIRIUS
      Status `/tmp/jl_4k360j/Project.toml`
  [0f8b85d8] JSON3 v1.14.3
  [da04e1cc] MPI v0.20.23
  [51095b67] OpenBLAS32 v0.1.0
  [3581e6f0] SIRIUS v0.1.0
  [f8b46487] TestItemRunner v1.1.0
  [6b659922] SIRIUS_jll v7.6.1+0
  [8f399da3] Libdl v1.11.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_4k360j/Manifest.toml`
  [ffbed154] DocStringExtensions v0.9.5
  [692b3bcd] JLLWrappers v1.7.1
  [0f8b85d8] JSON3 v1.14.3
  [da04e1cc] MPI v0.20.23
  [3da0fdf6] MPIPreferences v0.1.11
  [51095b67] OpenBLAS32 v0.1.0
  [69de0a69] Parsers v2.8.3
  [eebad327] PkgVersion v0.3.3
  [aea7be01] PrecompileTools v1.3.3
  [21216c6a] Preferences v1.5.0
  [ae029012] Requires v1.3.1
  [3581e6f0] SIRIUS v0.1.0
  [856f2bd8] StructTypes v1.11.0
  [f8b46487] TestItemRunner v1.1.0
  [1c621080] TestItems v1.0.0
  [5f6e5a8a] COSTA_jll v2.2.2+0
  [f5851436] FFTW_jll v3.3.11+0
⌅ [1b77fbbe] GSL_jll v2.7.2+0
⌅ [0234f1f7] HDF5_jll v1.14.3+3
  [e33a78d0] Hwloc_jll v2.12.2+0
  [1d63c593] LLVMOpenMP_jll v18.1.8+0
  [94ce4f54] Libiconv_jll v1.18.0+0
  [a56a6d9d] Libxc_jll v7.0.0+2
  [7cb0a576] MPICH_jll v4.3.1+0
  [f1f71cc9] MPItrampoline_jll v5.5.4+0
  [9237b28f] MicrosoftMPI_jll v10.1.4+3
  [656ef2d0] OpenBLAS32_jll v0.3.29+0
⌅ [fe0851c0] OpenMPI_jll v4.1.8+1
  [6b659922] SIRIUS_jll v7.6.1+0
  [8be71ea8] SpFFT_jll v1.1.0+0
⌅ [02c8fc9c] XML2_jll v2.13.9+0
  [a65dc6b1] Xorg_libpciaccess_jll v0.18.1+0
  [477f73a3] libaec_jll v1.1.4+0
  [ef860afa] pugixml_jll v1.15.0+0
  [ac4a9f1e] spglib_jll v2.6.0+0
  [c0b6e1fa] spla_jll v1.6.1+0
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [8ba89e20] Distributed v1.11.0
  [f43a241f] Downloads v1.7.0
  [7b1f6079] FileWatching v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0
  [4af54fe1] LazyArtifacts v1.11.0
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.13.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [a63ad114] Mmap v1.11.0
  [ca575930] NetworkOptions v1.3.0
  [44cfe95a] Pkg v1.13.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [6462fe0b] Sockets v1.11.0
  [f489334b] StyledStrings v1.11.0
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] LibCURL_jll v8.16.0+0
  [e37daf67] LibGit2_jll v1.9.1+0
  [29816b5a] LibSSH2_jll v1.11.3+1
  [14a3606d] MozillaCACerts_jll v2025.9.9
  [4536629a] OpenBLAS_jll v0.3.29+0
  [458c3c95] OpenSSL_jll v3.5.4+0
  [efcefdf7] PCRE2_jll v10.46.0+0
  [83775a58] Zlib_jll v1.3.1+2
  [3161d3a3] Zstd_jll v1.5.7+1
  [8e850b90] libblastrampoline_jll v5.13.1+0
  [8e850ede] nghttp2_jll v1.67.1+0
  [3f19e933] p7zip_jll v17.6.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
ERROR: LoadError: UndefVarError: `push_testset` not defined in `Test`
Suggestion: check for spelling errors or missing imports.
Stacktrace:
 [1] getproperty
   @ ./Base_compiler.jl:50 [inlined]
 [2] run_tests(path::String; filter::Nothing, verbose::Bool)
   @ TestItemRunner ~/.julia/packages/TestItemRunner/Q6zqe/src/TestItemRunner.jl:197
 [3] kwcall(::@NamedTuple{verbose::Bool}, ::typeof(TestItemRunner.run_tests), path::String)
   @ TestItemRunner ~/.julia/packages/TestItemRunner/Q6zqe/src/TestItemRunner.jl:133
 [4] top-level scope
   @ ~/.julia/packages/SIRIUS/ebgHq/test/runtests_runner.jl:3
 [5] include(mod::Module, _path::String)
   @ Base ./Base.jl:309
 [6] exec_options(opts::Base.JLOptions)
   @ Base ./client.jl:344
 [7] _start()
   @ Base ./client.jl:577
in expression starting at /home/pkgeval/.julia/packages/SIRIUS/ebgHq/test/runtests_runner.jl:3
ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so --depwarn=yes --check-bounds=yes --pkgimages=existing -g1 --startup-file=no /home/pkgeval/.julia/packages/SIRIUS/ebgHq/test/runtests_runner.jl`, ProcessExited(1)) [1]

Stacktrace:
 [1] pipeline_error
   @ ./process.jl:611 [inlined]
 [2] run(::Cmd; wait::Bool)
   @ Base ./process.jl:526
 [3] run(::Cmd)
   @ Base ./process.jl:523
 [4] top-level scope
   @ ~/.julia/packages/SIRIUS/ebgHq/test/runtests.jl:36
 [5] include(mapexpr::Function, mod::Module, _path::String)
   @ Base ./Base.jl:310
 [6] top-level scope
   @ none:6
 [7] eval(m::Module, e::Any)
   @ Core ./boot.jl:489
 [8] exec_options(opts::Base.JLOptions)
   @ Base ./client.jl:310
 [9] _start()
   @ Base ./client.jl:577
in expression starting at /home/pkgeval/.julia/packages/SIRIUS/ebgHq/test/runtests.jl:33

Testing failed after 86.43s

ERROR: LoadError: Package SIRIUS errored during testing
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2673
  [3] test
    @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2522 [inlined]
  [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:538
  [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:515
  [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:168
  [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:157
  [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156
  [9] test
    @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [inlined]
 [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String)
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:155
 [11] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:219
 [12] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [13] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:344
 [14] _start()
    @ Base ./client.jl:577
in expression starting at /PkgEval.jl/scripts/evaluate.jl:210

PkgEval failed after 320.95s: package tests unexpectedly errored