Package evaluation of HighlyAdaptiveLasso on Julia 1.13.0-DEV.1244 (c841b5fe7d*) started at 2025-10-02T22:39:17.553


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 10.15s


################################################################################
# Installation
#

Installing HighlyAdaptiveLasso...
   Resolving package versions...
   Installed Conda ─ v1.10.2
   Installed RCall ─ v0.13.18
    Updating `~/.julia/environments/v1.13/Project.toml`
  [c5dac772] + HighlyAdaptiveLasso v0.2.0
    Updating `~/.julia/environments/v1.13/Manifest.toml`
  [66dad0bd] + AliasTables v1.1.3
⌅ [324d7699] + CategoricalArrays v0.10.8
  [34da2185] + Compat v4.18.1
  [8f4d0f93] + Conda v1.10.2
  [a8cc5b0e] + Crayons v4.1.1
  [9a962f9c] + DataAPI v1.16.0
  [a93c6f00] + DataFrames v1.8.0
⌅ [864edb3b] + DataStructures v0.18.22
  [e2d170a0] + DataValueInterfaces v1.0.0
  [ffbed154] + DocStringExtensions v0.9.5
  [c5dac772] + HighlyAdaptiveLasso v0.2.0
  [34004b35] + HypergeometricFunctions v0.3.28
  [842dd82b] + InlineStrings v1.4.5
  [41ab1584] + InvertedIndices v1.3.1
  [92d709cd] + IrrationalConstants v0.2.4
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [692b3bcd] + JLLWrappers v1.7.1
  [682c06a0] + JSON v0.21.4
  [b964fa9f] + LaTeXStrings v1.4.0
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [e80e1ace] + MLJModelInterface v1.12.0
  [e1d29d7a] + Missings v1.2.0
  [bac558e1] + OrderedCollections v1.8.1
  [69de0a69] + Parsers v2.8.3
  [2dfb63ee] + PooledArrays v1.4.3
  [aea7be01] + PrecompileTools v1.3.3
  [21216c6a] + Preferences v1.5.0
  [08abe8d2] + PrettyTables v3.0.11
  [43287f4e] + PtrArrays v1.3.0
⌅ [6f49c342] + RCall v0.13.18
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.1
  [79098fc4] + Rmath v0.8.0
  [30f210dd] + ScientificTypesBase v3.0.0
  [91c51154] + SentinelArrays v1.4.8
  [1277b4bf] + ShiftedArrays v2.0.0
  [a2af1166] + SortingAlgorithms v1.2.2
  [276daf66] + SpecialFunctions v2.5.1
  [64bff920] + StatisticalTraits v3.5.0
  [10745b16] + Statistics v1.11.1
  [82ae8749] + StatsAPI v1.7.1
  [2913bbd2] + StatsBase v0.34.6
  [4c63d2b9] + StatsFuns v1.5.0
  [3eaba693] + StatsModels v0.7.7
  [892a3eda] + StringManipulation v0.4.1
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.1
  [81def892] + VersionParsing v1.3.0
  [1b915085] + WinReg v1.0.0
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
  [f50d1b31] + Rmath_jll v0.5.1+0
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [f43a241f] + Downloads v1.7.0
  [7b1f6079] + FileWatching v1.11.0
  [9fa8497b] + Future v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [b27032c2] + LibCURL v0.6.4
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.13.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [de0858da] + Printf v1.11.0
  [3fa0cd96] + REPL v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [2f01184e] + SparseArrays v1.13.0
  [f489334b] + StyledStrings v1.11.0
  [fa267f1f] + TOML v1.0.3
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] + LibCURL_jll v8.16.0+0
  [29816b5a] + LibSSH2_jll v1.11.3+1
  [14a3606d] + MozillaCACerts_jll v2025.9.9
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [05823500] + OpenLibm_jll v0.8.7+0
  [458c3c95] + OpenSSL_jll v3.5.4+0
  [bea87d4a] + SuiteSparse_jll v7.10.1+0
  [83775a58] + Zlib_jll v1.3.1+2
  [3161d3a3] + Zstd_jll v1.5.7+1
  [8e850b90] + libblastrampoline_jll v5.13.1+0
  [8e850ede] + nghttp2_jll v1.67.1+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`
    Building Conda → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/b19db3927f0db4151cb86d073689f2428e524576/build.log`
    Building RCall → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/3084689b18f9e5e817a6ce9a83a7654d8ad0f2f6/build.log`

Installation completed after 92.16s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

┌ Warning: Could not use exact versions of packages in manifest, re-resolving
└ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:76
Precompiling package dependencies...

Precompilation completed after 78.79s


################################################################################
# Testing
#

     Testing HighlyAdaptiveLasso
        Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function.
    Updating `/tmp/jl_UduKm1/Project.toml`
  [c5dac772] + HighlyAdaptiveLasso v0.2.0
  [a7f614a8] + MLJBase v1.9.0
  [8dfed614] ~ Test ⇒ v1.11.0
    Updating `/tmp/jl_UduKm1/Manifest.toml`
  [7d9f7c33] + Accessors v0.1.42
  [79e6a3ab] + Adapt v4.4.0
  [dce04be8] + ArgCheck v2.5.0
  [a9b6321e] + Atomix v1.1.2
  [198e06fe] + BangBang v0.4.4
  [9718e550] + Baselet v0.1.1
⌅ [af321ab8] + CategoricalDistributions v0.1.15
  [d360d2e6] + ChainRulesCore v1.26.0
  [3da002f7] + ColorTypes v0.12.1
  [a33af91c] + CompositionsBase v0.1.2
  [ed09eef8] + ComputationalResources v0.3.2
  [187b0558] + ConstructionBase v1.6.0
  [6add18c4] + ContextVariablesX v0.1.3
  [244e2a9f] + DefineSingletons v0.1.2
  [8bb1440f] + DelimitedFiles v1.9.1
  [31c24e10] + Distributions v0.25.120
  [cc61a311] + FLoops v0.2.2
  [b9860ae5] + FLoopsBase v0.1.1
  [1a297f60] + FillArrays v1.14.0
  [53c48c17] + FixedPointNumbers v0.8.5
  [46192b85] + GPUArraysCore v0.2.0
  [076d061b] + HashArrayMappedTries v0.2.0
  [c5dac772] + HighlyAdaptiveLasso v0.2.0
  [22cec73e] + InitialValues v0.3.1
  [3587e190] + InverseFunctions v0.1.17
  [b14d175d] + JuliaVariables v0.2.4
  [63c18a36] + KernelAbstractions v0.9.38
  [92ad9a40] + LearnAPI v1.0.1
  [c2834f40] + MLCore v1.0.0
  [a7f614a8] + MLJBase v1.9.0
  [e80e1ace] + MLJModelInterface v1.12.0
  [d8e11817] + MLStyle v0.4.17
  [f1d291b0] + MLUtils v0.4.8
  [1914dd2f] + MacroTools v0.5.16
  [128add7d] + MicroCollections v0.2.0
  [872c559c] + NNlib v0.9.31
  [71a1bf82] + NameResolution v0.1.5
  [90014a1f] + PDMats v0.11.35
  [d96e819e] + Parameters v0.12.3
  [8162dcfd] + PrettyPrint v0.2.0
⌅ [08abe8d2] ↓ PrettyTables v3.0.11 ⇒ v2.4.0
  [92933f4c] + ProgressMeter v1.11.0
  [1fd47b50] + QuadGK v2.11.2
  [3cdcf5f2] + RecipesBase v1.3.4
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  [30f210dd] + ScientificTypesBase v3.0.0
  [7e506255] + ScopedValues v1.5.0
  [efcf1570] + Setfield v1.1.2
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  [699a6c99] + SimpleTraits v0.9.5
  [171d559e] + SplittablesBase v0.1.15
  [90137ffa] + StaticArrays v1.9.15
  [1e83bf80] + StaticArraysCore v1.4.3
  [c062fc1d] + StatisticalMeasuresBase v0.1.3
  [64bff920] + StatisticalTraits v3.5.0
  [28d57a85] + Transducers v0.4.85
  [3a884ed6] + UnPack v1.0.2
  [013be700] + UnsafeAtomics v0.3.0
  [8ba89e20] + Distributed v1.11.0
  [56ddb016] + Logging v1.11.0
  [4607b0f0] + SuiteSparse
  [8dfed614] ~ Test ⇒ v1.11.0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`
        Test Successfully re-resolved
      Status `/tmp/jl_UduKm1/Project.toml`
  [c5dac772] HighlyAdaptiveLasso v0.2.0
  [a7f614a8] MLJBase v1.9.0
⌅ [6f49c342] RCall v0.13.18
  [9a3f8284] Random v1.11.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_UduKm1/Manifest.toml`
  [7d9f7c33] Accessors v0.1.42
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  [66dad0bd] AliasTables v1.1.3
  [dce04be8] ArgCheck v2.5.0
  [a9b6321e] Atomix v1.1.2
  [198e06fe] BangBang v0.4.4
  [9718e550] Baselet v0.1.1
⌅ [324d7699] CategoricalArrays v0.10.8
⌅ [af321ab8] CategoricalDistributions v0.1.15
  [d360d2e6] ChainRulesCore v1.26.0
  [3da002f7] ColorTypes v0.12.1
  [34da2185] Compat v4.18.1
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  [ed09eef8] ComputationalResources v0.3.2
  [8f4d0f93] Conda v1.10.2
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⌅ [864edb3b] DataStructures v0.18.22
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  [8bb1440f] DelimitedFiles v1.9.1
  [31c24e10] Distributions v0.25.120
  [ffbed154] DocStringExtensions v0.9.5
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  [1a297f60] FillArrays v1.14.0
  [53c48c17] FixedPointNumbers v0.8.5
  [46192b85] GPUArraysCore v0.2.0
  [076d061b] HashArrayMappedTries v0.2.0
  [c5dac772] HighlyAdaptiveLasso v0.2.0
  [34004b35] HypergeometricFunctions v0.3.28
  [22cec73e] InitialValues v0.3.1
  [842dd82b] InlineStrings v1.4.5
  [3587e190] InverseFunctions v0.1.17
  [41ab1584] InvertedIndices v1.3.1
  [92d709cd] IrrationalConstants v0.2.4
  [82899510] IteratorInterfaceExtensions v1.0.0
  [692b3bcd] JLLWrappers v1.7.1
  [682c06a0] JSON v0.21.4
  [b14d175d] JuliaVariables v0.2.4
  [63c18a36] KernelAbstractions v0.9.38
  [b964fa9f] LaTeXStrings v1.4.0
  [92ad9a40] LearnAPI v1.0.1
  [2ab3a3ac] LogExpFunctions v0.3.29
  [c2834f40] MLCore v1.0.0
  [a7f614a8] MLJBase v1.9.0
  [e80e1ace] MLJModelInterface v1.12.0
  [d8e11817] MLStyle v0.4.17
  [f1d291b0] MLUtils v0.4.8
  [1914dd2f] MacroTools v0.5.16
  [128add7d] MicroCollections v0.2.0
  [e1d29d7a] Missings v1.2.0
  [872c559c] NNlib v0.9.31
  [71a1bf82] NameResolution v0.1.5
  [bac558e1] OrderedCollections v1.8.1
  [90014a1f] PDMats v0.11.35
  [d96e819e] Parameters v0.12.3
  [69de0a69] Parsers v2.8.3
  [2dfb63ee] PooledArrays v1.4.3
  [aea7be01] PrecompileTools v1.3.3
  [21216c6a] Preferences v1.5.0
  [8162dcfd] PrettyPrint v0.2.0
⌅ [08abe8d2] PrettyTables v2.4.0
  [92933f4c] ProgressMeter v1.11.0
  [43287f4e] PtrArrays v1.3.0
  [1fd47b50] QuadGK v2.11.2
⌅ [6f49c342] RCall v0.13.18
  [3cdcf5f2] RecipesBase v1.3.4
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.1
  [79098fc4] Rmath v0.8.0
  [321657f4] ScientificTypes v3.1.1
  [30f210dd] ScientificTypesBase v3.0.0
  [7e506255] ScopedValues v1.5.0
  [91c51154] SentinelArrays v1.4.8
  [efcf1570] Setfield v1.1.2
  [1277b4bf] ShiftedArrays v2.0.0
  [605ecd9f] ShowCases v0.1.0
  [699a6c99] SimpleTraits v0.9.5
  [a2af1166] SortingAlgorithms v1.2.2
  [276daf66] SpecialFunctions v2.5.1
  [171d559e] SplittablesBase v0.1.15
  [90137ffa] StaticArrays v1.9.15
  [1e83bf80] StaticArraysCore v1.4.3
  [c062fc1d] StatisticalMeasuresBase v0.1.3
  [64bff920] StatisticalTraits v3.5.0
  [10745b16] Statistics v1.11.1
  [82ae8749] StatsAPI v1.7.1
  [2913bbd2] StatsBase v0.34.6
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  [3eaba693] StatsModels v0.7.7
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  [28d57a85] Transducers v0.4.85
  [3a884ed6] UnPack v1.0.2
  [013be700] UnsafeAtomics v0.3.0
  [81def892] VersionParsing v1.3.0
  [1b915085] WinReg v1.0.0
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
  [f50d1b31] Rmath_jll v0.5.1+0
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
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  [9fa8497b] Future v1.11.0
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  [9e88b42a] Serialization v1.11.0
  [6462fe0b] Sockets v1.11.0
  [2f01184e] SparseArrays v1.13.0
  [f489334b] StyledStrings v1.11.0
  [4607b0f0] SuiteSparse
  [fa267f1f] TOML v1.0.3
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] LibCURL_jll v8.16.0+0
  [29816b5a] LibSSH2_jll v1.11.3+1
  [14a3606d] MozillaCACerts_jll v2025.9.9
  [4536629a] OpenBLAS_jll v0.3.29+0
  [05823500] OpenLibm_jll v0.8.7+0
  [458c3c95] OpenSSL_jll v3.5.4+0
  [bea87d4a] SuiteSparse_jll v7.10.1+0
  [83775a58] Zlib_jll v1.3.1+2
  [3161d3a3] Zstd_jll v1.5.7+1
  [8e850b90] libblastrampoline_jll v5.13.1+0
  [8e850ede] nghttp2_jll v1.67.1+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
[ Info: Training machine(HALRegressor(formula = nothing, …), …).
┌ Error: Problem fitting the machine machine(HALRegressor(formula = nothing, …), …). 
└ @ MLJBase ~/.julia/packages/MLJBase/F8Zzu/src/machines.jl:694
[ Info: Running type checks... 
[ Info: Type checks okay. 

Test HALRegressor: Error During Test at /home/pkgeval/.julia/packages/HighlyAdaptiveLasso/jGeCa/test/runtests.jl:8
  Got exception outside of a @test
  REvalError: Error in library(hal9001) : there is no package called ‘hal9001’
Test Summary:     | Error  Total   Time
Test HALRegressor |     1      1  32.5s
RNG of the outermost testset: Xoshiro(0x92a5689512b106ef, 0xaff8e35b140b078c, 0x452db80890038644, 0x8829779eaec6ca2d, 0xb596f027e6534422)
ERROR: LoadError: Some tests did not pass: 0 passed, 0 failed, 1 errored, 0 broken.
in expression starting at /home/pkgeval/.julia/packages/HighlyAdaptiveLasso/jGeCa/test/runtests.jl:8

Testing failed after 336.47s

ERROR: LoadError: Package HighlyAdaptiveLasso errored during testing
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2673
  [3] test
    @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2522 [inlined]
  [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:538
  [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:515
  [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:168
  [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:157
  [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156
  [9] test
    @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [inlined]
 [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String)
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:155
 [11] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:219
 [12] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [13] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:344
 [14] _start()
    @ Base ./client.jl:577
in expression starting at /PkgEval.jl/scripts/evaluate.jl:210

PkgEval failed after 572.6s: package tests unexpectedly errored