Package evaluation of CounterfactualExplanations on Julia 1.13.0-DEV.1244 (c841b5fe7d*) started at 2025-10-03T05:34:12.248 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 10.97s ################################################################################ # Installation # Installing CounterfactualExplanations... Resolving package versions... Installed ChunkCodecLibZstd ─────────── v1.0.0 Installed DefineSingletons ──────────── v0.1.2 Installed ContextVariablesX ─────────── v0.1.3 Installed InlineStrings ─────────────── v1.4.5 Installed FLoops ────────────────────── v0.2.2 Installed MultivariateStats ─────────── v0.10.3 Installed NearestNeighbors ──────────── v0.4.22 Installed TaijaBase ─────────────────── v1.2.3 Installed OrderedCollections ────────── v1.8.1 Installed Functors ──────────────────── v0.5.2 Installed EnzymeCore ────────────────── v0.8.14 Installed InitialValues ─────────────── v0.3.1 Installed TabularDisplay ────────────── v1.3.0 Installed SentinelArrays ────────────── v1.4.8 Installed ChainRules ────────────────── v1.72.6 Installed ArgCheck ──────────────────── v2.5.0 Installed FileIO ────────────────────── v1.17.0 Installed Distances ─────────────────── v0.10.12 Installed QuadGK ────────────────────── v2.11.2 Installed NaNMath ───────────────────── v1.1.3 Installed FLoopsBase ────────────────── v0.1.1 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed ScopedValues ──────────────── v1.5.0 Installed Arpack ────────────────────── v0.5.4 Installed PackageExtensionCompat ────── v1.0.2 Installed Tables ────────────────────── v1.12.1 Installed InverseFunctions ──────────── v0.1.17 Installed Reexport ──────────────────── v1.2.2 Installed Missings ──────────────────── v1.2.0 Installed TableTraits ───────────────── v1.0.1 Installed Crayons ───────────────────── v4.1.1 Installed LaTeXStrings ──────────────── v1.4.0 Installed Preferences ───────────────── v1.5.0 Installed SortingAlgorithms ─────────── v1.2.2 Installed UnPack ────────────────────── v1.0.2 Installed Format ────────────────────── v1.3.7 Installed Inflate ───────────────────── v0.1.5 Installed DataStructures ────────────── v0.19.1 Installed MLStyle ───────────────────── v0.4.17 Installed LinkedLists ───────────────── v0.1.1 Installed MacroTools ────────────────── v0.5.16 Installed Flux ──────────────────────── v0.16.5 Installed DiffResults ───────────────── v1.1.0 Installed FillArrays ────────────────── v1.14.0 Installed AbstractTrees ─────────────── v0.4.5 Installed DelimitedFiles ────────────── v1.9.1 Installed ArnoldiMethod ─────────────── v0.4.0 Installed StatsBase ─────────────────── v0.34.6 Installed DataValueInterfaces ───────── v1.0.0 Installed CommonSubexpressions ──────── v0.3.1 Installed RealDot ───────────────────── v0.1.0 Installed Zygote ────────────────────── v0.7.10 Installed Optimisers ────────────────── v0.4.6 Installed MLJDecisionTreeInterface ──── v0.4.2 Installed PrettyPrint ───────────────── v0.2.0 Installed GPUArraysCore ─────────────── v0.2.0 Installed IrrationalConstants ───────── v0.2.4 Installed SimpleTraits ──────────────── v0.9.5 Installed SplittablesBase ───────────── v0.1.15 Installed ThreadsX ──────────────────── v0.1.12 Installed Referenceables ────────────── v0.1.3 Installed MetaGraphs ────────────────── v0.8.1 Installed Setfield ──────────────────── v1.1.2 Installed Transducers ───────────────── v0.4.85 Installed PooledArrays ──────────────── v1.4.3 Installed LRUCache ──────────────────── v1.6.2 Installed Baselet ───────────────────── v0.1.1 Installed PDMats ────────────────────── v0.11.35 Installed DocStringExtensions ───────── v0.9.5 Installed CompositionsBase ──────────── v0.1.2 Installed ForwardDiff ───────────────── v1.2.1 Installed MLDataDevices ─────────────── v1.13.0 Installed NameResolution ────────────── v0.1.5 Installed OneHotArrays ──────────────── v0.2.10 Installed Rmath_jll ─────────────────── v0.5.1+0 Installed AliasTables ───────────────── v1.1.3 Installed Memoization ───────────────── v0.2.2 Installed ScientificTypes ───────────── v3.1.1 Installed SparseInverseSubset ───────── v0.1.2 Installed HashArrayMappedTries ──────── v0.2.0 Installed Combinatorics ─────────────── v1.0.3 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed RecipesBase ───────────────── v1.3.4 Installed DataAPI ───────────────────── v1.16.0 Installed InvertedIndices ───────────── v1.3.1 Installed MLCore ────────────────────── v1.0.0 Installed MLUtils ───────────────────── v0.4.8 Installed StaticArraysCore ──────────── v1.4.3 Installed AbstractFFTs ──────────────── v1.5.0 Installed BangBang ──────────────────── v0.4.4 Installed StaticArrays ──────────────── v1.9.15 Installed NNlib ─────────────────────── v0.9.31 Installed SciMLPublic ───────────────── v1.0.0 Installed ColorTypes ────────────────── v0.12.1 Installed Requires ──────────────────── v1.3.1 Installed StringManipulation ────────── v0.4.1 Installed DecisionTree ──────────────── v0.12.4 Installed StatisticalMeasuresBase ───── v0.1.3 Installed DiffRules ─────────────────── v1.15.1 Installed LogExpFunctions ───────────── v0.3.29 Installed Rmath ─────────────────────── v0.8.0 Installed Arpack_jll ────────────────── v3.5.1+1 Installed PrettyTables ──────────────── v2.4.0 Installed UnsafeAtomics ─────────────── v0.3.0 Installed CategoricalDistributions ──── v0.1.15 Installed MLJBase ───────────────────── v1.9.0 Installed StatsFuns ─────────────────── v1.5.0 Installed ZygoteRules ───────────────── v0.2.7 Installed Distributions ─────────────── v0.25.120 Installed JLLWrappers ───────────────── v1.7.1 Installed IRTools ───────────────────── v0.4.15 Installed ChunkCodecCore ────────────── v1.0.0 Installed StatisticalTraits ─────────── v3.5.0 Installed LearnAPI ──────────────────── v1.0.1 Installed CategoricalArrays ─────────── v0.10.8 Installed Accessors ─────────────────── v0.1.42 Installed MicroCollections ──────────── v0.2.0 Installed DataFrames ────────────────── v1.8.0 Installed Adapt ─────────────────────── v4.4.0 Installed Graphs ────────────────────── v1.13.1 Installed ConstructionBase ──────────── v1.6.0 Installed HypergeometricFunctions ───── v0.3.28 Installed JLD2 ──────────────────────── v0.6.2 Installed JuliaVariables ────────────── v0.2.4 Installed Compat ────────────────────── v4.18.1 Installed ProgressLogging ───────────── v0.1.5 Installed TensorCore ────────────────── v0.1.1 Installed LogarithmicNumbers ────────── v1.4.1 Installed Statistics ────────────────── v1.11.1 Installed StatsAPI ──────────────────── v1.7.1 Installed Atomix ────────────────────── v1.1.2 Installed PrecompileTools ───────────── v1.3.3 Installed StructArrays ──────────────── v0.7.1 Installed OffsetArrays ──────────────── v1.17.0 Installed ChunkCodecLibZlib ─────────── v1.0.0 Installed ProgressMeter ─────────────── v1.11.0 Installed ChainRulesCore ────────────── v1.26.0 Installed ComputationalResources ────── v0.3.2 Installed KernelAbstractions ────────── v0.9.38 Installed Parameters ────────────────── v0.12.3 Installed ScikitLearnBase ───────────── v0.5.0 Installed PtrArrays ─────────────────── v1.3.0 Installed FixedPointNumbers ─────────── v0.8.5 Installed SpecialFunctions ──────────── v2.5.1 Installed EnergySamplers ────────────── v1.0.3 Installed ScientificTypesBase ───────── v3.0.0 Installed KernelFunctions ───────────── v0.10.65 Installed ShowCases ─────────────────── v0.1.0 Installed MLJModelInterface ─────────── v1.12.0 Installed CausalInference ───────────── v0.18.0 Installed CounterfactualExplanations ── v1.4.5 Installing 3 artifacts Installed artifact Arpack 147.2 KiB Installed artifact Rmath 121.9 KiB Installed artifact OpenSpecFun 194.9 KiB Updating `~/.julia/environments/v1.13/Project.toml` [2f13d31b] + CounterfactualExplanations v1.4.5 Updating `~/.julia/environments/v1.13/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [ec485272] + ArnoldiMethod v0.4.0 [7d9fca2a] + Arpack v0.5.4 [a9b6321e] + Atomix v1.1.2 [198e06fe] + BangBang v0.4.4 [9718e550] + Baselet v0.1.1 ⌅ [324d7699] + CategoricalArrays v0.10.8 ⌅ [af321ab8] + CategoricalDistributions v0.1.15 ⌅ [8e462317] + CausalInference v0.18.0 [082447d4] + ChainRules v1.72.6 [d360d2e6] + ChainRulesCore 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SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.13.1+0 [8e850ede] + nghttp2_jll v1.67.1+0 [3f19e933] + p7zip_jll v17.6.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 15.85s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4737.6 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:76 Precompiling package dependencies... ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 163 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1217 wait_forever at ./task.jl:1139 jfptr_wait_forever_30982.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] start_task at /source/src/task.c:1281 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000070163ad9b580 Total snapshots: 406. Utilization: 0% ╎406 @Base/task.jl:1139 wait_forever() 405╎ 406 @Base/task.jl:1217 wait() ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1217 wait_forever at ./task.jl:1139 jfptr_wait_forever_30982.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] start_task at /source/src/task.c:1281 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x0000710baa732b30 Total snapshots: 447. Utilization: 0% ╎447 @Base/task.jl:1139 wait_forever() 446╎ 447 @Base/task.jl:1217 wait() [163] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/precompile.jl:37 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1217 wait_forever at ./task.jl:1139 jfptr_wait_forever_30982.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] start_task at /source/src/task.c:1281 unknown function (ip: (nil)) at (unknown file) Allocations: 21548640 (Pool: 21547222; Big: 1418); GC: 30 [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:152 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1217 wait_forever at ./task.jl:1139 jfptr_wait_forever_30982.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] start_task at /source/src/task.c:1281 unknown function (ip: (nil)) at (unknown file) Allocations: 20253374 (Pool: 20252552; Big: 822); GC: 24 PkgEval terminated after 2778.42s: test duration exceeded the time limit