Package evaluation of ClusterDepth on Julia 1.13.0-DEV.1222 (39e1473f3b*) started at 2025-09-30T13:57:59.714 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.68s ################################################################################ # Installation # Installing ClusterDepth... Resolving package versions... Installed ClusterDepth ─ v0.2.4 Updating `~/.julia/environments/v1.13/Project.toml` [c8d8bbfa] + ClusterDepth v0.2.4 Updating `~/.julia/environments/v1.13/Manifest.toml` [66dad0bd] + AliasTables v1.1.3 [c8d8bbfa] + ClusterDepth v0.2.4 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.1 [ffbed154] + DocStringExtensions v0.9.5 [92d709cd] + IrrationalConstants v0.2.4 [2ab3a3ac] + LogExpFunctions v0.3.29 [e1d29d7a] + Missings v1.2.0 [bac558e1] + OrderedCollections v1.8.1 [43287f4e] + PtrArrays v1.3.0 [a2af1166] + SortingAlgorithms v1.2.2 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.6 [56f22d72] + Artifacts v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.13.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.13.1+0 Installation completed after 5.38s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 23.63s ################################################################################ # Testing # Testing ClusterDepth Status `/tmp/jl_IjDbp7/Project.toml` [c8d8bbfa] ClusterDepth v0.2.4 ⌃ [09f84164] HypothesisTests v0.10.13 ⌃ [860ef19b] StableRNGs v1.0.0 ⌃ [2913bbd2] StatsBase v0.33.21 [37e2e46d] LinearAlgebra v1.13.0 [9a3f8284] Random v1.11.0 [2f01184e] SparseArrays v1.13.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_IjDbp7/Manifest.toml` [7d9f7c33] Accessors v0.1.42 [c8d8bbfa] ClusterDepth v0.2.4 [861a8166] Combinatorics v1.0.3 [38540f10] CommonSolve v0.2.4 ⌃ [34da2185] Compat v4.5.0 [a33af91c] CompositionsBase v0.1.2 [187b0558] ConstructionBase v1.6.0 ⌃ [9a962f9c] DataAPI v1.14.0 ⌅ [864edb3b] DataStructures v0.18.13 ⌃ [31c24e10] Distributions v0.25.89 ⌃ [ffbed154] DocStringExtensions v0.9.3 [1a297f60] FillArrays v1.14.0 [34004b35] HypergeometricFunctions v0.3.28 ⌃ [09f84164] HypothesisTests v0.10.13 ⌃ [3587e190] InverseFunctions v0.1.8 ⌅ [92d709cd] IrrationalConstants v0.1.1 [692b3bcd] JLLWrappers v1.7.1 ⌃ [2ab3a3ac] LogExpFunctions v0.3.20 [1914dd2f] MacroTools v0.5.16 ⌃ [e1d29d7a] Missings v1.1.0 ⌃ [bac558e1] OrderedCollections v1.4.1 [90014a1f] PDMats v0.11.35 [21216c6a] Preferences v1.5.0 [1fd47b50] QuadGK v2.11.2 [189a3867] Reexport v1.2.2 ⌅ [79098fc4] Rmath v0.7.1 [f2b01f46] Roots v2.2.10 ⌃ [a2af1166] SortingAlgorithms v1.1.0 [276daf66] SpecialFunctions v2.5.1 ⌃ [860ef19b] StableRNGs v1.0.0 [10745b16] Statistics v1.11.1 ⌃ [82ae8749] StatsAPI v1.5.0 ⌃ [2913bbd2] StatsBase v0.33.21 ⌃ [4c63d2b9] StatsFuns v1.3.1 [efe28fd5] OpenSpecFun_jll v0.5.6+0 ⌅ [f50d1b31] Rmath_jll v0.4.3+0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [ca575930] NetworkOptions v1.3.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.2+0 [efcefdf7] PCRE2_jll v10.46.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.13.1+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Precompiling packages... 1181.1 ms ✓ DataAPI 1012.4 ms ✓ StatsAPI 1074.9 ms ✓ Compat 1376.2 ms ✓ LogExpFunctions 1144.3 ms ✓ Missings 3683.2 ms ✓ DataStructures 1745.5 ms ✓ SortingAlgorithms 9292.0 ms ✓ StatsBase 4421.0 ms ✓ ClusterDepth 9 dependencies successfully precompiled in 25 seconds. 24 already precompiled. ClusterDepth.calc_clusterdepth(data, 0) = (1:3, [0.6755660991191906, 0.32863200921212465, 0.23214355889044092], [0.24692664035915107, 0.32863200921212465, 0.6755660991191906]) ClusterDepth.clusterdepth(data; τ = 0.4, nperm = 5) = [1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0; 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 0.5 1.0 1.0; 1.0 1.0 1.0 0.6666666666666666 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0 1.0] Precompiling packages... 2994.7 ms ✓ QuadGK 1966.8 ms ✓ InverseFunctions 1841.7 ms ✓ Rmath_jll 5322.4 ms ✓ SpecialFunctions 1453.8 ms ✓ CompositionsBase → CompositionsBaseInverseFunctionsExt 1515.6 ms ✓ LogExpFunctions → InverseFunctionsExt 1721.1 ms ✓ Rmath 2734.4 ms ✓ HypergeometricFunctions 5697.0 ms ✓ Accessors 3066.3 ms ✓ StatsFuns 3857.8 ms ✓ Accessors → LinearAlgebraExt 2367.7 ms ✓ Accessors → TestExt 1942.3 ms ✓ StatsFuns → StatsFunsInverseFunctionsExt 16378.6 ms ✓ Distributions 9168.3 ms ✓ Roots 9331.3 ms ✓ HypothesisTests 16 dependencies successfully precompiled in 72 seconds. 52 already precompiled. test set: Test Failed at /home/pkgeval/.julia/packages/ClusterDepth/PU3eM/test/utils.jl:83 Expression: size(t) == (1000, 50) Evaluated: (10000, 50) == (1000, 50) Stacktrace: [1] top-level scope @ ~/.julia/packages/ClusterDepth/PU3eM/test/utils.jl:64 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1952 [inlined] [3] macro expansion @ ~/.julia/packages/ClusterDepth/PU3eM/test/utils.jl:83 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:751 [inlined] Test Summary: | Pass Fail Total Time ClusterDepth.jl | 54 1 55 3m03.9s troendle | 18 18 40.0s cluster | 6 6 1.3s Tests for 2D data | 0 3.8s Tests for 3D data | 0 20.4s sign_permute | 5 5 12.2s studentt | 12 12 3.8s test set | 2 1 3 16.3s pvals | 11 11 6.9s RNG of the outermost testset: Xoshiro(0x59da82ab4ec6c5f6, 0x988e0a042ea212a7, 0x619d91f9556883fa, 0xa40e59b54633c41d, 0x87fcee8b7121ee98) ERROR: LoadError: Some tests did not pass: 54 passed, 1 failed, 0 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/ClusterDepth/PU3eM/test/runtests.jl:4 Testing failed after 223.53s ERROR: LoadError: Package ClusterDepth errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2673 [3] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2522 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:538 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:515 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:168 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:157 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [9] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:155 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [12] include(mod::Module, _path::String) @ Base ./Base.jl:309 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [14] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 278.96s: package has test failures