Package evaluation of ChargedParticleDynamics on Julia 1.13.0-DEV.1222 (39e1473f3b*) started at 2025-10-01T05:59:04.698 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.73s ################################################################################ # Installation # Installing ChargedParticleDynamics... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [209b3593] + ChargedParticleDynamics v0.1.0 Updating `~/.julia/environments/v1.13/Manifest.toml` [47edcb42] + ADTypes v1.18.0 [a4c015fc] + ANSIColoredPrinters v0.0.1 [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.4.0 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.20.0 ⌅ [e2ed5e7c] + Bijections v0.1.10 [d1d4a3ce] + BitFlags v0.1.9 [d360d2e6] + ChainRulesCore v1.26.0 [209b3593] + ChargedParticleDynamics v0.1.0 [2752694e] + ChebyshevTransforms v0.0.1 [944b1d66] + CodecZlib v0.7.8 [35d6a980] + ColorSchemes v3.31.0 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.1 [861a8166] + Combinatorics v1.0.3 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.18.0 [b152e2b5] + CompositeTypes v0.1.4 [a33af91c] + CompositionsBase v0.1.2 [f0e56b4a] + ConcurrentUtilities 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[3f19e933] + p7zip_jll v17.6.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 7.8s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:76 Precompiling package dependencies... ERROR: LoadError: The following 2 direct dependencies failed to precompile: GeometricProblems Failed to precompile GeometricProblems [18cb22b4-ad41-5c80-9c5f-710df63fbdc9] to "/home/pkgeval/.julia/compiled/v1.13/GeometricProblems/jl_nHZUU4" (ProcessExited(1)). ERROR: LoadError: UndefVarError: `ForwardDiff` not defined in `PreallocationTools` Suggestion: check for spelling errors or missing imports. Hint: ForwardDiff is loaded but not imported in the active module Main. Stacktrace: [1] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:62 [2] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [3] top-level scope @ ~/.julia/packages/Symbolics/Eas9m/ext/SymbolicsPreallocationToolsExt.jl:5 [4] include(mod::Module, _path::String) @ Base ./Base.jl:309 [5] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3068 [6] top-level scope @ stdin:5 [7] eval(m::Module, e::Any) @ Core ./boot.jl:489 [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2914 [9] include_string @ ./loading.jl:2924 [inlined] [10] exec_options(opts::Base.JLOptions) @ Base ./client.jl:342 [11] _start() @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/Symbolics/Eas9m/ext/SymbolicsPreallocationToolsExt.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile SymbolicsPreallocationToolsExt [cf6f9317-8bac-542e-bce0-9dbc7ae7d397] to "/home/pkgeval/.julia/compiled/v1.13/SymbolicsPreallocationToolsExt/jl_R5OLsC" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Vector{Base.PkgId}) @ Base ./loading.jl:3355 [3] kwcall(::@NamedTuple{reasons::Dict{String, Int64}, loadable_exts::Vector{Base.PkgId}}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:3233 [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})() @ Base ./loading.jl:2697 [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [6] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [8] #invokelatest_gr#234 @ ./reflection.jl:1335 [inlined] [9] invokelatest_gr @ ./reflection.jl:1327 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3926 [11] maybe_cachefile_lock @ ./loading.jl:3923 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::Nothing) @ Base ./loading.jl:2683 [13] _require_prelocked(uuidkey::Base.PkgId, env::Nothing) @ Base ./loading.jl:2511 [14] _require_prelocked @ ./loading.jl:2505 [inlined] [15] run_extension_callbacks(extid::Base.ExtensionId) @ Base ./loading.jl:1577 [16] run_extension_callbacks(pkgid::Base.PkgId) @ Base ./loading.jl:1614 [17] run_package_callbacks(modkey::Base.PkgId) @ Base ./loading.jl:1430 [18] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2519 [19] macro expansion @ ./loading.jl:2439 [inlined] [20] macro expansion @ ./lock.jl:376 [inlined] [21] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2403 [22] require @ ./loading.jl:2379 [inlined] [23] eval_import_path @ ./module.jl:36 [inlined] [24] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [25] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [26] top-level scope @ ~/.julia/packages/EulerLagrange/ZOrQg/src/EulerLagrange.jl:6 [27] include(mod::Module, _path::String) @ Base ./Base.jl:309 [28] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3068 [29] top-level scope @ stdin:5 [30] eval(m::Module, e::Any) @ Core ./boot.jl:489 [31] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2914 [32] include_string @ ./loading.jl:2924 [inlined] [33] exec_options(opts::Base.JLOptions) @ Base ./client.jl:342 [34] _start() @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/EulerLagrange/ZOrQg/src/EulerLagrange.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile EulerLagrange [e4b6a126-98cc-486b-a68d-c3e5d57f8cc9] to "/home/pkgeval/.julia/compiled/v1.13/EulerLagrange/jl_WD7duR" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3355 [3] kwcall(::@NamedTuple{reasons::Dict{String, Int64}, loadable_exts::Nothing}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:3233 [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})() @ Base ./loading.jl:2697 [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [6] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [8] #invokelatest_gr#234 @ ./reflection.jl:1335 [inlined] [9] invokelatest_gr @ ./reflection.jl:1327 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3926 [11] maybe_cachefile_lock @ ./loading.jl:3923 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2683 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2511 [14] macro expansion @ ./loading.jl:2439 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2403 [17] require @ ./loading.jl:2379 [inlined] [18] eval_import_path @ ./module.jl:36 [inlined] [19] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [20] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [21] top-level scope @ ~/.julia/packages/GeometricProblems/eGEeY/src/double_pendulum.jl:25 [22] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [23] top-level scope @ ~/.julia/packages/GeometricProblems/eGEeY/src/GeometricProblems.jl:12 [24] include(mod::Module, _path::String) @ Base ./Base.jl:309 [25] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3068 [26] top-level scope @ stdin:5 [27] eval(m::Module, e::Any) @ Core ./boot.jl:489 [28] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2914 [29] include_string @ ./loading.jl:2924 [inlined] [30] exec_options(opts::Base.JLOptions) @ Base ./client.jl:342 [31] _start() @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/GeometricProblems/eGEeY/src/double_pendulum.jl:1 in expression starting at /home/pkgeval/.julia/packages/GeometricProblems/eGEeY/src/GeometricProblems.jl:1 in expression starting at stdin:5 ChargedParticleDynamics Failed to precompile ChargedParticleDynamics [209b3593-7183-5600-9f8f-df5ce7fddd64] to "/home/pkgeval/.julia/compiled/v1.13/ChargedParticleDynamics/jl_Dk6o7P" (ProcessExited(1)). ERROR: LoadError: UndefVarError: `ForwardDiff` not defined in `PreallocationTools` Suggestion: check for spelling errors or missing imports. Hint: ForwardDiff is loaded but not imported in the active module Main. Stacktrace: [1] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:62 [2] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [3] top-level scope @ ~/.julia/packages/Symbolics/Eas9m/ext/SymbolicsPreallocationToolsExt.jl:5 [4] include(mod::Module, _path::String) @ Base ./Base.jl:309 [5] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3068 [6] top-level scope @ stdin:5 [7] eval(m::Module, e::Any) @ Core ./boot.jl:489 [8] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2914 [9] include_string @ ./loading.jl:2924 [inlined] [10] exec_options(opts::Base.JLOptions) @ Base ./client.jl:342 [11] _start() @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/Symbolics/Eas9m/ext/SymbolicsPreallocationToolsExt.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile SymbolicsPreallocationToolsExt [cf6f9317-8bac-542e-bce0-9dbc7ae7d397] to "/home/pkgeval/.julia/compiled/v1.13/SymbolicsPreallocationToolsExt/jl_nSz7Pp" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Vector{Base.PkgId}) @ Base ./loading.jl:3355 [3] kwcall(::@NamedTuple{reasons::Dict{String, Int64}, loadable_exts::Vector{Base.PkgId}}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:3233 [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})() @ Base ./loading.jl:2697 [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [6] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [8] #invokelatest_gr#234 @ ./reflection.jl:1335 [inlined] [9] invokelatest_gr @ ./reflection.jl:1327 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3926 [11] maybe_cachefile_lock @ ./loading.jl:3923 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::Nothing) @ Base ./loading.jl:2683 [13] _require_prelocked(uuidkey::Base.PkgId, env::Nothing) @ Base ./loading.jl:2511 [14] _require_prelocked @ ./loading.jl:2505 [inlined] [15] run_extension_callbacks(extid::Base.ExtensionId) @ Base ./loading.jl:1577 [16] run_extension_callbacks(pkgid::Base.PkgId) @ Base ./loading.jl:1614 [17] run_package_callbacks(modkey::Base.PkgId) @ Base ./loading.jl:1430 [18] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2519 [19] macro expansion @ ./loading.jl:2439 [inlined] [20] macro expansion @ ./lock.jl:376 [inlined] [21] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2403 [22] require @ ./loading.jl:2379 [inlined] [23] eval_import_path @ ./module.jl:36 [inlined] [24] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [25] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [26] top-level scope @ ~/.julia/packages/EulerLagrange/ZOrQg/src/EulerLagrange.jl:6 [27] include(mod::Module, _path::String) @ Base ./Base.jl:309 [28] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3068 [29] top-level scope @ stdin:5 [30] eval(m::Module, e::Any) @ Core ./boot.jl:489 [31] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2914 [32] include_string @ ./loading.jl:2924 [inlined] [33] exec_options(opts::Base.JLOptions) @ Base ./client.jl:342 [34] _start() @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/EulerLagrange/ZOrQg/src/EulerLagrange.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile EulerLagrange [e4b6a126-98cc-486b-a68d-c3e5d57f8cc9] to "/home/pkgeval/.julia/compiled/v1.13/EulerLagrange/jl_R7AKwq" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3355 [3] kwcall(::@NamedTuple{reasons::Dict{String, Int64}, loadable_exts::Nothing}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:3233 [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})() @ Base ./loading.jl:2697 [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [6] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [8] #invokelatest_gr#234 @ ./reflection.jl:1335 [inlined] [9] invokelatest_gr @ ./reflection.jl:1327 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3926 [11] maybe_cachefile_lock @ ./loading.jl:3923 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2683 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2511 [14] macro expansion @ ./loading.jl:2439 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2403 [17] require @ ./loading.jl:2379 [inlined] [18] eval_import_path @ ./module.jl:36 [inlined] [19] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [20] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [21] top-level scope @ ~/.julia/packages/GeometricProblems/eGEeY/src/double_pendulum.jl:25 [22] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [23] top-level scope @ ~/.julia/packages/GeometricProblems/eGEeY/src/GeometricProblems.jl:12 [24] include(mod::Module, _path::String) @ Base ./Base.jl:309 [25] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3068 [26] top-level scope @ stdin:5 [27] eval(m::Module, e::Any) @ Core ./boot.jl:489 [28] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2914 [29] include_string @ ./loading.jl:2924 [inlined] [30] exec_options(opts::Base.JLOptions) @ Base ./client.jl:342 [31] _start() @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/GeometricProblems/eGEeY/src/double_pendulum.jl:1 in expression starting at /home/pkgeval/.julia/packages/GeometricProblems/eGEeY/src/GeometricProblems.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile GeometricProblems [18cb22b4-ad41-5c80-9c5f-710df63fbdc9] to "/home/pkgeval/.julia/compiled/v1.13/GeometricProblems/jl_LdKxZ6" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3355 [3] kwcall(::@NamedTuple{reasons::Dict{String, Int64}, loadable_exts::Nothing}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:3233 [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})() @ Base ./loading.jl:2697 [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [6] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [8] #invokelatest_gr#234 @ ./reflection.jl:1335 [inlined] [9] invokelatest_gr @ ./reflection.jl:1327 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3926 [11] maybe_cachefile_lock @ ./loading.jl:3923 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2683 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2511 [14] macro expansion @ ./loading.jl:2439 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2403 [17] require @ ./loading.jl:2379 [inlined] [18] eval_import_path @ ./module.jl:36 [inlined] [19] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [20] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr}) @ Base ./module.jl:101 [21] top-level scope @ ~/.julia/packages/ChargedParticleDynamics/kvFqR/src/charged_particle_3d/charged_particle_3d_canonical.jl:4 [22] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [23] top-level scope @ ~/.julia/packages/ChargedParticleDynamics/kvFqR/src/charged_particle_3d/singular_field_canonical.jl:16 [24] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [25] top-level scope @ ~/.julia/packages/ChargedParticleDynamics/kvFqR/src/ChargedParticle3d.jl:3 [26] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:310 [27] top-level scope @ ~/.julia/packages/ChargedParticleDynamics/kvFqR/src/ChargedParticleDynamics.jl:5 [28] include(mod::Module, _path::String) @ Base ./Base.jl:309 [29] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3068 [30] top-level scope @ stdin:5 [31] eval(m::Module, e::Any) @ Core ./boot.jl:489 [32] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2914 [33] include_string @ ./loading.jl:2924 [inlined] [34] exec_options(opts::Base.JLOptions) @ Base ./client.jl:342 [35] _start() @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/ChargedParticleDynamics/kvFqR/src/charged_particle_3d/charged_particle_3d_canonical.jl:4 in expression starting at /home/pkgeval/.julia/packages/ChargedParticleDynamics/kvFqR/src/charged_particle_3d/singular_field_canonical.jl:1 in expression starting at /home/pkgeval/.julia/packages/ChargedParticleDynamics/kvFqR/src/ChargedParticle3d.jl:1 in expression starting at /home/pkgeval/.julia/packages/ChargedParticleDynamics/kvFqR/src/ChargedParticleDynamics.jl:1 in expression starting at stdin:5 in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 1762.71s ################################################################################ # Testing # Testing ChargedParticleDynamics Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function. Updating `/tmp/jl_3sAehF/Project.toml` [209b3593] + ChargedParticleDynamics v0.1.0 ⌃ [dcce2d33] + GeometricIntegrators v0.14.8 [1bc83da4] + SafeTestsets v0.1.0 Updating `/tmp/jl_3sAehF/Manifest.toml` [4c555306] + ArrayLayouts v1.11.2 [aae01518] + BandedMatrices v1.9.4 [0e736298] + Bessels v0.2.8 [8e7c35d0] + BlockArrays v1.7.2 [209b3593] + ChargedParticleDynamics v0.1.0 [a09551c4] + CompactBasisFunctions v0.2.14 [7ae1f121] + ContinuumArrays v0.19.4 [a8cc5b0e] + Crayons v4.1.1 [717857b8] + DSP v0.8.4 [e2d170a0] + DataValueInterfaces v1.0.0 [442a2c76] + FastGaussQuadrature v1.0.2 [057dd010] + FastTransforms v0.17.0 [a8297547] + GenericFFT v0.1.6 [14197337] + GenericLinearAlgebra v0.3.18 ⌃ [dcce2d33] + GeometricIntegrators v0.14.8 [4858937d] + InfiniteArrays v0.15.6 [e1ba4f0e] + Infinities v0.1.11 [c8e1da08] + IterTools v1.10.0 [5078a376] + LazyArrays v2.6.3 [f27b6e38] + Polynomials v4.1.0 ⌅ [08abe8d2] + PrettyTables v2.4.0 [92933f4c] + ProgressMeter v1.11.0 [a08977f5] + QuadratureRules v0.1.6 [c4ea9172] + QuasiArrays v0.12.0 [807425ed] + RecurrenceRelationships v0.2.0 [fb486d5c] + RungeKutta v0.5.17 [1bc83da4] + SafeTestsets v0.1.0 [892a3eda] + StringManipulation v0.4.1 ⌃ [2efcf032] ↓ SymbolicIndexingInterface v0.3.45 ⇒ v0.3.44 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [c751599d] + ToeplitzMatrices v0.8.5 [34b6f7d7] + FastTransforms_jll v0.6.3+0 [1a1011a3] + SharedArrays v1.11.0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Test Successfully re-resolved Status `/tmp/jl_3sAehF/Project.toml` [209b3593] ChargedParticleDynamics v0.1.0 [55939f99] DecFP v1.4.1 [e30172f5] Documenter v1.14.1 [d6c1ba6f] ElectromagneticFields v0.5.2 ⌅ [f6369f11] ForwardDiff v0.10.39 ⌅ [c85262ba] GeometricEquations v0.18.2 ⌃ [dcce2d33] GeometricIntegrators v0.14.8 ⌃ [18cb22b4] GeometricProblems v0.6.8 ⌅ [7843afe4] GeometricSolutions v0.4.2 [b964fa9f] LaTeXStrings v1.4.0 [d96e819e] Parameters v0.12.3 [91a5bcdd] Plots v1.41.1 [26663084] PoincareInvariants v0.4.0 [3cdcf5f2] RecipesBase v1.3.4 [1bc83da4] SafeTestsets v0.1.0 ⌅ [36b790f5] SimpleSolvers v0.3.8 [37e2e46d] LinearAlgebra v1.13.0 [de0858da] Printf v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_3sAehF/Manifest.toml` [47edcb42] ADTypes v1.18.0 [a4c015fc] ANSIColoredPrinters v0.0.1 [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.4.0 [66dad0bd] AliasTables v1.1.3 [4fba245c] 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v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [781609d7] GMP_jll v6.3.0+2 [deac9b47] LibCURL_jll v8.16.0+0 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [3a97d323] MPFR_jll v4.2.2+0 [14a3606d] MozillaCACerts_jll v2025.9.9 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.2+0 [efcefdf7] PCRE2_jll v10.46.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.67.1+0 [3f19e933] p7zip_jll v17.6.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Precompiling packages... 77589.8 ms ✓ CompactBasisFunctions 87858.6 ms ? RungeKutta Info Given GeometricIntegrators was explicitly requested, output will be shown live  WARNING: Constructor for type "AbstractVector" was extended in `QuasiArrays` without explicit qualification or import.  NOTE: Assumed "AbstractVector" refers to `Base.AbstractVector`. This behavior is deprecated and may differ in future versions.  NOTE: This behavior may have differed in Julia versions prior to 1.12.  Hint: If you intended to create a new generic function of the same name, use `function AbstractVector end`.  Hint: To silence the warning, qualify `AbstractVector` as `Base.AbstractVector` in the method signature or explicitly `import Base: AbstractVector`. WARNING: Constructor for type "AbstractArray" was extended in `QuasiArrays` without explicit qualification or import.  NOTE: Assumed "AbstractArray" refers to `Base.AbstractArray`. This behavior is deprecated and may differ in future versions.  NOTE: This behavior may have differed in Julia versions prior to 1.12.  Hint: If you intended to create a new generic function of the same name, use `function AbstractArray end`.  Hint: To silence the warning, qualify `AbstractArray` as `Base.AbstractArray` in the method signature or explicitly `import Base: AbstractArray`. WARNING: Constructor for type "AbstractMatrix" was extended in `QuasiArrays` without explicit qualification or import.  NOTE: Assumed "AbstractMatrix" refers to `Base.AbstractMatrix`. This behavior is deprecated and may differ in future versions.  NOTE: This behavior may have differed in Julia versions prior to 1.12.  Hint: If you intended to create a new generic function of the same name, use `function AbstractMatrix end`.  Hint: To silence the warning, qualify `AbstractMatrix` as `Base.AbstractMatrix` in the method signature or explicitly `import Base: AbstractMatrix`. WARNING: Constructor for type "Tuple" was extended in `QuasiIteratorsMD` without explicit qualification or import.  NOTE: Assumed "Tuple" refers to `Base.Tuple`. This behavior is deprecated and may differ in future versions.  NOTE: This behavior may have differed in Julia versions prior to 1.12.  Hint: If you intended to create a new generic function of the same name, use `function Tuple end`.  Hint: To silence the warning, qualify `Tuple` as `Base.Tuple` in the method signature or explicitly `import Base: Tuple`. WARNING: Method definition convert(Type{SparseArrays.AbstractSparseArray{Tv, Ti, N}}, FillArrays.Zeros{T, N, Axes} where Axes) where {T, Tv, Ti, N} in module FillArraysSparseArraysExt at /home/pkgeval/.julia/packages/FillArrays/7ijZm/ext/FillArraysSparseArraysExt.jl:31 overwritten in module FillArraysSparseArraysExt on the same line (check for duplicate calls to `include`). ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. 180918.7 ms ? GeometricIntegrators 1 dependency successfully precompiled in 352 seconds. 186 already precompiled. 2 dependencies failed but may be precompilable after restarting julia 2 dependencies had output during precompilation: ┌ RungeKutta │ WARNING: Constructor for type "AbstractVector" was extended in `QuasiArrays` without explicit qualification or import. │ NOTE: Assumed "AbstractVector" refers to `Base.AbstractVector`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function AbstractVector end`. │ Hint: To silence the warning, qualify `AbstractVector` as `Base.AbstractVector` in the method signature or explicitly `import Base: AbstractVector`. │ WARNING: Constructor for type "AbstractArray" was extended in `QuasiArrays` without explicit qualification or import. │ NOTE: Assumed "AbstractArray" refers to `Base.AbstractArray`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function AbstractArray end`. │ Hint: To silence the warning, qualify `AbstractArray` as `Base.AbstractArray` in the method signature or explicitly `import Base: AbstractArray`. │ WARNING: Constructor for type "AbstractMatrix" was extended in `QuasiArrays` without explicit qualification or import. │ NOTE: Assumed "AbstractMatrix" refers to `Base.AbstractMatrix`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function AbstractMatrix end`. │ Hint: To silence the warning, qualify `AbstractMatrix` as `Base.AbstractMatrix` in the method signature or explicitly `import Base: AbstractMatrix`. │ WARNING: Constructor for type "Tuple" was extended in `QuasiIteratorsMD` without explicit qualification or import. │ NOTE: Assumed "Tuple" refers to `Base.Tuple`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Tuple end`. │ Hint: To silence the warning, qualify `Tuple` as `Base.Tuple` in the method signature or explicitly `import Base: Tuple`. │ WARNING: Method definition convert(Type{SparseArrays.AbstractSparseArray{Tv, Ti, N}}, FillArrays.Zeros{T, N, Axes} where Axes) where {T, Tv, Ti, N} in module FillArraysSparseArraysExt at /home/pkgeval/.julia/packages/FillArrays/7ijZm/ext/FillArraysSparseArraysExt.jl:31 overwritten in module FillArraysSparseArraysExt on the same line (check for duplicate calls to `include`). │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ GeometricIntegrators │ [Output was shown above] └ ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 805 running 1 of 1 signal (10): User defined signal 1 access at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__fs_work at /workspace/srcdir/libuv/src/unix/fs.c:1633 uv_fs_access at /workspace/srcdir/libuv/src/unix/fs.c:1720 jl_fs_access at /source/src/jl_uv.c:633 ispath at ./stat.jl:377 resolve_depot at ./loading.jl:3451 parse_cache_header at ./loading.jl:3578 sort_by at ./loading.jl:1207 _broadcast_getindex_evalf at ./broadcast.jl:701 [inlined] _broadcast_getindex at ./broadcast.jl:674 [inlined] _getindex at ./broadcast.jl:622 [inlined] getindex at ./broadcast.jl:618 [inlined] macro expansion at ./broadcast.jl:997 [inlined] macro expansion at ./simdloop.jl:77 [inlined] copyto! at ./broadcast.jl:996 [inlined] copyto! at ./broadcast.jl:949 [inlined] copy at ./broadcast.jl:921 [inlined] materialize at ./broadcast.jl:896 [inlined] find_all_in_cache_path at ./loading.jl:1227 #_require_search_from_serialized#900 at ./loading.jl:2055 _require_search_from_serialized at ./loading.jl:1995 [inlined] #__require_prelocked##0 at ./loading.jl:2685 #mkpidlock#8 at /source/usr/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 unknown function (ip: 0x782edfa9c3e0) at (unknown file) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 mkpidlock at /source/usr/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:91 #mkpidlock#7 at /source/usr/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] mkpidlock at /source/usr/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 jfptr_mkpidlock_73106.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] jl_f__apply_iterate at /source/src/builtins.c:876 #trymkpidlock#13 at /source/usr/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] jl_f__apply_iterate at /source/src/builtins.c:876 trymkpidlock at /source/usr/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:113 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] jl_f_invoke_in_world at /source/src/builtins.c:908 #invokelatest_gr#234 at ./reflection.jl:1335 [inlined] invokelatest_gr at ./reflection.jl:1327 [inlined] #maybe_cachefile_lock#921 at ./loading.jl:3926 maybe_cachefile_lock at ./loading.jl:3923 [inlined] __require_prelocked at ./loading.jl:2683 _require_prelocked at ./loading.jl:2511 macro expansion at ./loading.jl:2439 [inlined] macro expansion at ./lock.jl:376 [inlined] __require at ./loading.jl:2403 jfptr___require_40372.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] jl_f_invoke_in_world at /source/src/builtins.c:908 require at ./loading.jl:2379 [inlined] eval_import_path at ./module.jl:36 [inlined] eval_import_path_all at ./module.jl:60 _eval_using at ./module.jl:137 jfptr__eval_using_72062.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:690 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:793 jl_eval_toplevel_stmts at /source/src/toplevel.c:622 jl_eval_module_expr at /source/src/toplevel.c:248 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:687 jl_eval_toplevel_stmts at /source/src/toplevel.c:622 jl_toplevel_eval_flex at /source/src/toplevel.c:734 ijl_toplevel_eval at /source/src/toplevel.c:805 ijl_toplevel_eval_in at /source/src/toplevel.c:850 eval at ./boot.jl:489 include_string at ./loading.jl:2914 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 _include at ./loading.jl:2974 include at ./Base.jl:309 include_package_for_output at ./loading.jl:3068 jfptr_include_package_for_output_59888.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:690 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:793 jl_eval_toplevel_stmts at /source/src/toplevel.c:622 jl_toplevel_eval_flex at /source/src/toplevel.c:734 ijl_toplevel_eval at /source/src/toplevel.c:805 ijl_toplevel_eval_in at /source/src/toplevel.c:850 eval at ./boot.jl:489 include_string at ./loading.jl:2914 include_string at ./loading.jl:2924 [inlined] exec_options at ./client.jl:342 _start at ./client.jl:577 jfptr__start_67836.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x782ee13cd249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 801 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1217 wait_forever at ./task.jl:1139 jfptr_wait_forever_44610.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] start_task at /source/src/task.c:1281 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Error: Profile printing listener crashed │ exception = │ This interactive function requires a stdlib to be loaded, and package code should instead use it directly from that stdlib. │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:44 │ [2] require_stdlib(package_uuidkey::Base.PkgId, ext::Nothing, from::Module) │ @ Base ./loading.jl:2807 │ [3] require_stdlib │ @ ./loading.jl:2803 [inlined] │ [4] macro expansion │ @ ./some.jl:157 [inlined] │ [5] profile_printing_listener(cond::Base.AsyncCondition) │ @ Base ./Base.jl:336 │ [6] (::Base.var"#start_profile_listener##0#start_profile_listener##1"{Base.AsyncCondition})() │ @ Base ./Base.jl:355 └ @ Base Base.jl:346 ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 745 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1217 wait_forever at ./task.jl:1139 jfptr_wait_forever_44610.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] start_task at /source/src/task.c:1281 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Error: Profile printing listener crashed │ exception = │ This interactive function requires a stdlib to be loaded, and package code should instead use it directly from that stdlib. │ Stacktrace: │ [1] error(s::String) │ @ Base ./error.jl:44 │ [2] require_stdlib(package_uuidkey::Base.PkgId, ext::Nothing, from::Module) │ @ Base ./loading.jl:2807 │ [3] require_stdlib │ @ ./loading.jl:2803 [inlined] │ [4] macro expansion │ @ ./some.jl:157 [inlined] │ [5] profile_printing_listener(cond::Base.AsyncCondition) │ @ Base ./Base.jl:336 │ [6] (::Base.var"#start_profile_listener##0#start_profile_listener##1"{Base.AsyncCondition})() │ @ Base ./Base.jl:355 └ @ Base Base.jl:346 ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 613 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1217 wait_forever at ./task.jl:1139 jfptr_wait_forever_44610.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] start_task at /source/src/task.c:1281 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1217 wait_forever at ./task.jl:1139 jfptr_wait_forever_44610.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] start_task at /source/src/task.c:1281 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x0000701897bdad10 Total snapshots: 410. Utilization: 0% ╎410 @Base/task.jl:1139 wait_forever() 409╎ 410 @Base/task.jl:1217 wait() [613] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/ChargedParticleDynamics/kvFqR/test/charged_particle_3d_tests.jl:7 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1217 wait_forever at ./task.jl:1139 jfptr_wait_forever_44610.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] start_task at /source/src/task.c:1281 unknown function (ip: (nil)) at (unknown file) Allocations: 5443966 (Pool: 5443857; Big: 109); GC: 12 [801] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/SimpleSolvers/jTeAA/src/nonlinear/nlsolve_newton.jl:2 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1217 wait_forever at ./task.jl:1139 jfptr_wait_forever_44610.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] start_task at /source/src/task.c:1281 unknown function (ip: (nil)) at (unknown file) Allocations: 7380075 (Pool: 7380015; Big: 60); GC: 11 [745] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/GeometricIntegrators/Zg6je/src/Integrators.jl:19 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1217 wait_forever at ./task.jl:1139 jfptr_wait_forever_44610.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] start_task at /source/src/task.c:1281 unknown function (ip: (nil)) at (unknown file) Allocations: 17942637 (Pool: 17942403; Big: 234); GC: 19 [805] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/NLsolve/gJL1I/src/NLsolve.jl:6 getdents64 at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) readdir64 at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x782ee1476579) at /lib/x86_64-linux-gnu/libc.so.6 uv__fs_scandir at /workspace/srcdir/libuv/src/unix/fs.c:538 uv__fs_work at /workspace/srcdir/libuv/src/unix/fs.c:1654 uv_fs_scandir at /workspace/srcdir/libuv/src/unix/fs.c:2005 #_readdir#25 at ./file.jl:1073 _readdir at ./file.jl:1068 [inlined] #readdir#23 at ./file.jl:997 [inlined] readdir at ./file.jl:997 [inlined] find_all_in_cache_path at ./loading.jl:1188 #_require_search_from_serialized#900 at ./loading.jl:2055 _require_search_from_serialized at ./loading.jl:1995 [inlined] #__require_prelocked##0 at ./loading.jl:2685 #mkpidlock#8 at /source/usr/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 unknown function (ip: 0x782edfa9c3e0) at (unknown file) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 mkpidlock at /source/usr/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:91 #mkpidlock#7 at /source/usr/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] mkpidlock at /source/usr/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 jfptr_mkpidlock_73106.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] jl_f__apply_iterate at /source/src/builtins.c:876 #trymkpidlock#13 at /source/usr/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] jl_f__apply_iterate at /source/src/builtins.c:876 trymkpidlock at /source/usr/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:113 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] jl_f_invoke_in_world at /source/src/builtins.c:908 #invokelatest_gr#234 at ./reflection.jl:1335 [inlined] invokelatest_gr at ./reflection.jl:1327 [inlined] #maybe_cachefile_lock#921 at ./loading.jl:3926 maybe_cachefile_lock at ./loading.jl:3923 [inlined] __require_prelocked at ./loading.jl:2683 _require_prelocked at ./loading.jl:2511 macro expansion at ./loading.jl:2439 [inlined] macro expansion at ./lock.jl:376 [inlined] __require at ./loading.jl:2403 jfptr___require_40372.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] jl_f_invoke_in_world at /source/src/builtins.c:908 require at ./loading.jl:2379 [inlined] eval_import_path at ./module.jl:36 [inlined] eval_import_path_all at ./module.jl:60 _eval_using at ./module.jl:137 jfptr__eval_using_72062.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:690 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:793 jl_eval_toplevel_stmts at /source/src/toplevel.c:622 jl_eval_module_expr at /source/src/toplevel.c:248 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:687 jl_eval_toplevel_stmts at /source/src/toplevel.c:622 jl_toplevel_eval_flex at /source/src/toplevel.c:734 ijl_toplevel_eval at /source/src/toplevel.c:805 ijl_toplevel_eval_in at /source/src/toplevel.c:850 eval at ./boot.jl:489 include_string at ./loading.jl:2914 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 _include at ./loading.jl:2974 include at ./Base.jl:309 include_package_for_output at ./loading.jl:3068 jfptr_include_package_for_output_59888.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:690 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:793 jl_eval_toplevel_stmts at /source/src/toplevel.c:622 jl_toplevel_eval_flex at /source/src/toplevel.c:734 ijl_toplevel_eval at /source/src/toplevel.c:805 ijl_toplevel_eval_in at /source/src/toplevel.c:850 eval at ./boot.jl:489 include_string at ./loading.jl:2914 include_string at ./loading.jl:2924 [inlined] exec_options at ./client.jl:342 _start at ./client.jl:577 jfptr__start_67836.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x782ee13cd249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) Allocations: 503060619 (Pool: 503060617; Big: 2); GC: 149 val already in a list atexit hook threw an error: ErrorException("schedule: Task not runnable") error at ./error.jl:44 #schedule#597 at ./task.jl:1022 schedule at ./task.jl:1014 [inlined] uv_writecb_task at ./stream.jl:1195 jlcapi_uv_writecb_task_17585.1 at /opt/julia/lib/julia/sys.so (unknown line) uv__write_callbacks at /workspace/srcdir/libuv/src/unix/stream.c:926 uv__stream_io at /workspace/srcdir/libuv/src/unix/stream.c:1227 uv__run_pending at /workspace/srcdir/libuv/src/unix/core.c:824 uv_run at /workspace/srcdir/libuv/src/unix/core.c:420 ijl_process_events at /source/src/jl_uv.c:397 process_events at ./libuv.jl:133 [inlined] wait at ./task.jl:1204 uv_write at ./stream.jl:1076 unsafe_write at ./stream.jl:1149 write at ./strings/io.jl:237 [inlined] print at ./strings/io.jl:239 jfptr_print_30006.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 showerror at ./errorshow.jl:161 unknown function (ip: 0x7b1cd809e206) at (unknown file) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 _atexit at ./initdefs.jl:467 jfptr__atexit_76654.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] ijl_atexit_hook at /source/src/init.c:263 jl_exit_thread0_cb at /source/src/signals-unix.c:564 PkgEval terminated after 2753.13s: test duration exceeded the time limit