Package evaluation of RestrictedBoltzmannMachines on Julia 1.13.0-DEV.1216 (bcb9a929e5*) started at 2025-09-28T16:12:34.786 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 11.06s ################################################################################ # Installation # Installing RestrictedBoltzmannMachines... Resolving package versions... Installed Compat ────────────────────── v4.18.0 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed NaNMath ───────────────────── v1.1.3 Installed SciMLPublic ───────────────── v1.0.0 Installed CommonWorldInvalidations ──── v1.0.0 Installed Requires ──────────────────── v1.3.1 Installed SpecialFunctions ──────────── v2.5.1 Installed Preferences ───────────────── v1.5.0 Installed JLLWrappers ───────────────── v1.7.1 Installed Static ────────────────────── v1.3.0 Installed Statistics ────────────────── v1.11.1 Installed DiffRules ─────────────────── v1.15.1 Installed FillArrays ────────────────── v1.14.0 Installed LogExpFunctions ───────────── v0.3.29 Installed EllipsisNotation ──────────── v1.8.0 Installed PrecompileTools ───────────── v1.3.3 Installed Adapt ─────────────────────── v4.4.0 Installed ConstructionBase ──────────── v1.6.0 Installed IfElse ────────────────────── v0.1.1 Installed IrrationalConstants ───────── v0.2.4 Installed DocStringExtensions ───────── v0.9.5 Installed ChainRulesCore ────────────── v1.26.0 Installed StaticArrayInterface ──────── v1.8.0 Installed Functors ──────────────────── v0.5.2 Installed Optimisers ────────────────── v0.4.6 Installed ArrayInterface ────────────── v7.20.0 Installed RestrictedBoltzmannMachines ─ v5.1.1 Installing 1 artifacts Installed artifact OpenSpecFun 194.9 KiB Updating `~/.julia/environments/v1.13/Project.toml` [12e6b396] + RestrictedBoltzmannMachines v5.1.1 Updating `~/.julia/environments/v1.13/Manifest.toml` [79e6a3ab] + Adapt v4.4.0 [4fba245c] + ArrayInterface v7.20.0 [d360d2e6] + ChainRulesCore v1.26.0 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.0 [187b0558] + ConstructionBase v1.6.0 [b552c78f] + DiffRules v1.15.1 [ffbed154] + DocStringExtensions v0.9.5 [da5c29d0] + EllipsisNotation v1.8.0 [1a297f60] + FillArrays v1.14.0 [d9f16b24] + Functors v0.5.2 [615f187c] + IfElse v0.1.1 [92d709cd] + IrrationalConstants v0.2.4 [692b3bcd] + JLLWrappers v1.7.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [77ba4419] + NaNMath v1.1.3 [3bd65402] + Optimisers v0.4.6 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [ae029012] + Requires v1.3.1 [12e6b396] + RestrictedBoltzmannMachines v5.1.1 [431bcebd] + SciMLPublic v1.0.0 [276daf66] + SpecialFunctions v2.5.1 [aedffcd0] + Static v1.3.0 [0d7ed370] + StaticArrayInterface v1.8.0 [10745b16] + Statistics v1.11.1 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [56f22d72] + Artifacts v1.11.0 [ade2ca70] + Dates v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [8e850b90] + libblastrampoline_jll v5.13.1+0 Installation completed after 8.18s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 3588.6 ms ✓ TestEnv 1 dependency successfully precompiled in 4 seconds. 27 already precompiled. Precompiling package dependencies... Precompilation completed after 406.43s ################################################################################ # Testing # Testing RestrictedBoltzmannMachines Status `/tmp/jl_hPHZJB/Project.toml` ⌃ [4c88cf16] Aqua v0.8.13 [8bb1440f] DelimitedFiles v1.9.1 [31c24e10] Distributions v0.25.120 [da5c29d0] EllipsisNotation v1.8.0 ⌃ [26cc04aa] FiniteDifferences v0.12.32 ⌃ [f6369f11] ForwardDiff v1.0.1 [f67ccb44] HDF5 v0.17.2 [2ab3a3ac] LogExpFunctions v0.3.29 ⌃ [872c559c] NNlib v0.9.30 [3bd65402] Optimisers v0.4.6 [1fd47b50] QuadGK v2.11.2 [12e6b396] RestrictedBoltzmannMachines v5.1.1 [276daf66] SpecialFunctions v2.5.1 [10745b16] Statistics v1.11.1 ⌃ [2913bbd2] StatsBase v0.34.5 [98cad3c8] ValueHistories v0.5.4 [e88e6eb3] Zygote v0.7.10 [b77e0a4c] InteractiveUtils v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_hPHZJB/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 ⌃ [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 ⌃ [4c88cf16] Aqua v0.8.13 ⌃ [4fba245c] ArrayInterface v7.19.0 ⌃ [a9b6321e] Atomix v1.1.1 [082447d4] ChainRules v1.72.5 ⌃ [d360d2e6] ChainRulesCore v1.25.2 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 ⌃ [34da2185] Compat v4.16.0 [187b0558] ConstructionBase v1.6.0 [9a962f9c] DataAPI v1.16.0 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [8bb1440f] DelimitedFiles v1.9.1 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [31c24e10] Distributions v0.25.120 [ffbed154] DocStringExtensions v0.9.5 [da5c29d0] EllipsisNotation v1.8.0 ⌃ [1a297f60] FillArrays v1.13.0 ⌃ [26cc04aa] FiniteDifferences v0.12.32 ⌃ [f6369f11] ForwardDiff v1.0.1 [d9f16b24] Functors v0.5.2 [46192b85] GPUArraysCore v0.2.0 [f67ccb44] HDF5 v0.17.2 [076d061b] HashArrayMappedTries v0.2.0 [34004b35] HypergeometricFunctions v0.3.28 [7869d1d1] IRTools v0.4.15 [615f187c] IfElse v0.1.1 [92d709cd] IrrationalConstants v0.2.4 [82899510] IteratorInterfaceExtensions v1.0.0 ⌃ [692b3bcd] JLLWrappers v1.7.0 ⌃ [63c18a36] KernelAbstractions v0.9.35 [2ab3a3ac] LogExpFunctions v0.3.29 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.16 [e1d29d7a] Missings v1.2.0 ⌃ [872c559c] NNlib v0.9.30 [77ba4419] NaNMath v1.1.3 [3bd65402] Optimisers v0.4.6 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.35 ⌃ [aea7be01] PrecompileTools v1.2.1 ⌃ [21216c6a] Preferences v1.4.3 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [c1ae055f] RealDot v0.1.0 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [12e6b396] RestrictedBoltzmannMachines v5.1.1 [708f8203] Richardson v1.4.2 [79098fc4] Rmath v0.8.0 ⌃ [7e506255] ScopedValues v1.3.0 ⌃ [a2af1166] SortingAlgorithms v1.2.1 [dc90abb0] SparseInverseSubset v0.1.2 [276daf66] SpecialFunctions v2.5.1 ⌃ [aedffcd0] Static v1.2.0 [0d7ed370] StaticArrayInterface v1.8.0 ⌃ [90137ffa] StaticArrays v1.9.13 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 ⌃ [2913bbd2] StatsBase v0.34.5 [4c63d2b9] StatsFuns v1.5.0 [09ab397b] StructArrays v0.7.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [013be700] UnsafeAtomics v0.3.0 [98cad3c8] ValueHistories v0.5.4 [e88e6eb3] Zygote v0.7.10 [700de1a5] ZygoteRules v0.2.7 [0234f1f7] HDF5_jll v1.14.6+0 ⌃ [e33a78d0] Hwloc_jll v2.12.1+0 [7cb0a576] MPICH_jll v4.3.1+0 [f1f71cc9] MPItrampoline_jll v5.5.4+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [fe0851c0] OpenMPI_jll v5.0.8+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 ⌃ [477f73a3] libaec_jll v1.1.3+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.16.0+0 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.9.9 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.2+0 [efcefdf7] PCRE2_jll v10.46.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.67.1+0 [3f19e933] p7zip_jll v17.6.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Precompiling packages... 2014.5 ms ✓ FillArrays 923.9 ms ✓ Adapt 1120.4 ms ✓ Compat 1125.3 ms ✓ Preferences 982.1 ms ✓ FillArrays → FillArraysStatisticsExt 1146.1 ms ✓ ArrayInterface 858.4 ms ✓ Compat → CompatLinearAlgebraExt 930.0 ms ✓ PrecompileTools 1230.5 ms ✓ JLLWrappers 1496.2 ms ✓ Functors 2787.2 ms ✓ ChainRulesCore 5672.6 ms ✓ Static 1452.4 ms ✓ OpenSpecFun_jll 2774.7 ms ✓ Optimisers 3052.7 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 872.9 ms ✓ ArrayInterface → ArrayInterfaceChainRulesCoreExt 8699.5 ms ✓ StaticArrayInterface 5086.8 ms ✓ SpecialFunctions 1167.2 ms ✓ Optimisers → OptimisersAdaptExt 1015.4 ms ✓ EllipsisNotation 3959.0 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 3422.7 ms ✓ RestrictedBoltzmannMachines 22 dependencies successfully precompiled in 52 seconds. 17 already precompiled. Test Summary: | Pass Total Time two | 5 5 1.2s Test Summary: | Pass Total Time inf | 3 3 0.0s Test Summary: | Pass Total Time generate_sequences | 1 1 0.5s Test Summary: | Pass Total Time broadlike | 3 3 3.9s Test Summary: | Pass Total Time wmean | 7 7 13.9s Test Summary: | Pass Total Time wsum | 7 7 1.1s Test Summary: | Pass Total Time reshape_maybe | 12 12 0.3s Test Summary: | Pass Total Time sizedims | 6 6 0.1s Test Summary: | Pass Total Time moving_average | 103 103 0.1s Test Summary: | Pass Total Time vstack | 3 3 1.0s Test Summary: | Pass Total Time convert_eltype | 7 7 1.9s Test Summary: | Pass Total Time linalg | 6 6 7.9s Test Summary: | Pass Total Time onehot | 2102 2102 2.9s Test Summary: | Pass Total Time categorical_rand | 3 3 1.2s Test Summary: | Pass Total Time categorical_sample | 1 1 26.5s Test Summary: | Pass Total Time gumbel | 2 2 0.3s Test Summary: | Pass Total Time categorical_sample_from_logits | 1 1 8.1s Test Summary: | Pass Total Time categorical_sample_from_logits_gumbel | 1 1 2.0s Precompiling packages... 3871.7 ms ✓ DataStructures 3541.4 ms ✓ QuadGK 2 dependencies successfully precompiled in 7 seconds. 13 already precompiled. Precompiling packages... 1659.9 ms ✓ FillArrays → FillArraysSparseArraysExt 1850.6 ms ✓ Adapt → AdaptSparseArraysExt 1243.1 ms ✓ GPUArraysCore 838.1 ms ✓ StructArrays → StructArraysAdaptExt 1338.3 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 2417.5 ms ✓ ZygoteRules 927.0 ms ✓ AbstractFFTs → AbstractFFTsChainRulesCoreExt 9166.6 ms ✓ ForwardDiff 12107.7 ms ✓ ChainRules 65707.0 ms ✓ Zygote 10 dependencies successfully precompiled in 100 seconds. 56 already precompiled. Precompiling packages... 4659.8 ms ✓ ArrayInterface → ArrayInterfaceGPUArraysCoreExt 1 dependency successfully precompiled in 5 seconds. 5 already precompiled. Precompiling packages... 1362.2 ms ✓ ArrayInterface → ArrayInterfaceSparseArraysExt 1 dependency successfully precompiled in 1 seconds. 8 already precompiled. Precompiling packages... 1541.8 ms ✓ ArrayInterface → ArrayInterfaceChainRulesExt 1 dependency successfully precompiled in 2 seconds. 40 already precompiled. Precompiling packages... 800.7 ms ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 1 dependency successfully precompiled in 1 seconds. 5 already precompiled. Test Summary: | Pass Total Time batches, n=5, m=2, Bv=(), Bh=() | 8 8 1m29.6s Test Summary: | Pass Total Time batches, n=5, m=2, Bv=(), Bh=(3, 2) | 9 9 42.3s Test Summary: | Pass Total Time batches, n=5, m=2, Bv=(3, 2), Bh=() | 9 9 6.8s Test Summary: | Pass Total Time batches, n=5, m=2, Bv=(3, 2), Bh=(3, 2) | 9 9 14.9s Test Summary: | Pass Total Time batches, n=5, m=(3, 4), Bv=(), Bh=() | 8 8 8.5s Test Summary: | Pass Total Time batches, n=5, m=(3, 4), Bv=(), Bh=(3, 2) | 9 9 26.2s Test Summary: | Pass Total Time batches, n=5, m=(3, 4), Bv=(3, 2), Bh=() | 9 9 3.3s Test Summary: | Pass Total Time batches, n=5, m=(3, 4), Bv=(3, 2), Bh=(3, 2) | 9 9 7.6s Test Summary: | Pass Total Time batches, n=(5, 2), m=2, Bv=(), Bh=() | 8 8 3.6s Test Summary: | Pass Total Time batches, n=(5, 2), m=2, Bv=(), Bh=(3, 2) | 9 9 3.1s Test Summary: | Pass Total Time batches, n=(5, 2), m=2, Bv=(3, 2), Bh=() | 9 9 3.3s Test Summary: | Pass Total Time batches, n=(5, 2), m=2, Bv=(3, 2), Bh=(3, 2) | 9 9 6.7s Test Summary: | Pass Total Time batches, n=(5, 2), m=(3, 4), Bv=(), Bh=() | 8 8 3.6s Test Summary: | Pass Total Time batches, n=(5, 2), m=(3, 4), Bv=(), Bh=(3, 2) | 9 9 3.1s Test Summary: | Pass Total Time batches, n=(5, 2), m=(3, 4), Bv=(3, 2), Bh=() | 9 9 3.4s Test Summary: | Pass Total Time batches, n=(5, 2), m=(3, 4), Bv=(3, 2), Bh=(3, 2) | 9 9 8.6s Test Summary: | Pass Total Time singleton batch dims | 14 14 5.6s Test Summary: | Pass Total Time sample_v_from_v and sample_h_from_h on binary RBM | 4 4 11.1s Test Summary: | Pass Total Time rbm convenience constructors | 11 11 1.8s Test Summary: | Pass Total Time Binary-Binary RBM | 60 60 21.1s Test Summary: | Pass Total Time mirror | 5 5 7.0s Test Summary: | Pass Total Time binary free energy | 5 5 1.7s Test Summary: | Pass Total Time Gaussian-Gaussian RBM, 1-dimension | 1 1 12.1s Test Summary: | Pass Total Time Gaussian-Gaussian RBM, multi-dimensional | 8 8 38.7s Test Summary: | Pass Total Time zero hidden units | 1 1 0.0s Test Summary: | Pass Total Time ∂free_energy | 12 12 28.6s Test Summary: | Pass Total Time total_mean_h_from_v, total_mean_v_from_h, etc. | 8 8 10.0s Test Summary: | Pass Total Time testing RestrictedBoltzmannMachines.Binary | 79 79 53.4s Test Summary: | Pass Total Time testing RestrictedBoltzmannMachines.Spin | 79 79 42.5s Test Summary: | Pass Total Time testing RestrictedBoltzmannMachines.Potts | 79 79 46.4s Test Summary: | Pass Total Time testing RestrictedBoltzmannMachines.Gaussian | 79 79 42.6s Test Summary: | Pass Total Time testing RestrictedBoltzmannMachines.ReLU | 79 79 55.3s Test Summary: | Pass Total Time testing RestrictedBoltzmannMachines.dReLU | 79 79 2m14.4s Test Summary: | Pass Total Time testing RestrictedBoltzmannMachines.pReLU | 79 79 1m47.6s Test Summary: | Pass Total Time testing RestrictedBoltzmannMachines.xReLU | 79 79 2m22.2s Test Summary: | Pass Total Time discrete layers (RestrictedBoltzmannMachines.Binary) | 2 2 3.4s Test Summary: | Pass Total Time discrete layers (RestrictedBoltzmannMachines.Spin) | 2 2 2.0s Test Summary: | Pass Total Time discrete layers (RestrictedBoltzmannMachines.Potts) | 2 2 2.1s Test Summary: | Pass Total Time Binary | 127 127 7.9s Test Summary: | Pass Total Time Spin | 5 5 5.4s Test Summary: | Pass Total Time Potts | 7 7 7.3s Test Summary: | Pass Total Time Gaussian | 7 7 18.1s Test Summary: | Pass Total Time ReLU | 7 7 16.1s Test Summary: | Pass Total Time pReLU / xReLU / dReLU convert | 41 41 16.0s Test Summary: | Pass Total Time dReLU | 9 9 20.7s Test Summary: | Pass Total Time pReLU | 3 3 1m54.9s Test Summary: | Pass Total Time xReLU | 3 3 2m16.0s Test Summary: | Pass Total Time grad2ave RestrictedBoltzmannMachines.Binary | 1 1 2.5s Test Summary: | Pass Total Time grad2ave RestrictedBoltzmannMachines.Spin | 1 1 1.6s Test Summary: | Pass Total Time grad2ave RestrictedBoltzmannMachines.Potts | 1 1 1.3s Test Summary: | Pass Total Time grad2ave RestrictedBoltzmannMachines.Gaussian | 1 1 3.9s Test Summary: | Pass Total Time grad2ave RestrictedBoltzmannMachines.ReLU | 1 1 0.9s Test Summary: | Pass Total Time grad2ave RestrictedBoltzmannMachines.dReLU | 1 1 4.9s Test Summary: | Pass Total Time grad2ave RestrictedBoltzmannMachines.pReLU | 1 1 10.6s Test Summary: | Pass Total Time grad2ave RestrictedBoltzmannMachines.xReLU | 1 1 9.9s Test Summary: | Pass Total Time binary pseudolikelihood | 4 4 7.0s Test Summary: | Pass Total Time spins pseudolikelihood | 4 4 4.6s Test Summary: | Pass Total Time Potts pseudolikelihood | 4 4 5.6s Test Summary: | Pass Total Time nobs | 7 7 0.1s Test Summary: | Pass Total Time getobs | 6 6 1.6s Test Summary: | Pass Total Time shuffleobs | 4 4 0.5s Test Summary: | Pass Total Time infinite_minibatches | 49 49 0.6s Test Summary: | Pass Total Time initialization Binary | 1 1 3.6s Test Summary: | Pass Total Time initialization Spin | 1 1 3.2s Test Summary: | Pass Total Time initialization Potts | 1 1 11.9s Test Summary: | Pass Total Time initialization Gaussian | 2 2 4.3s Test Summary: | Pass Total Time initialization dReLU | 2 2 7.3s Test Summary: | Pass Total Time initialization pReLU | 2 2 2.4s Test Summary: | Pass Total Time initialization xReLU | 2 2 3.3s Test Summary: | Pass Total Time ∂regularize! | 3 3 28.5s Test Summary: | Pass Total Time ∂regularize | 3 3 4.7s Test Summary: | Pass Total Time ∂regularize_fields | 9 9 5.1s Precompiling packages... 1490.8 ms ✓ FillArrays → FillArraysPDMatsExt 1659.5 ms ✓ SortingAlgorithms 1405.3 ms ✓ Rmath_jll 2454.8 ms ✓ HypergeometricFunctions 5121.8 ms ✓ StatsBase 1675.4 ms ✓ Rmath 3204.0 ms ✓ StatsFuns 10109.1 ms ✓ Distributions 8 dependencies successfully precompiled in 27 seconds. 39 already precompiled. Precompiling packages... 3508.7 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 1 dependency successfully precompiled in 4 seconds. 23 already precompiled. Precompiling packages... 3763.1 ms ✓ Distributions → DistributionsChainRulesCoreExt 1 dependency successfully precompiled in 4 seconds. 52 already precompiled. Precompiling packages... 3370.4 ms ✓ Distributions → DistributionsTestExt 1 dependency successfully precompiled in 3 seconds. 49 already precompiled. Test Summary: | Pass Total Time sqrt1half | 6 6 0.0s Test Summary: | Pass Total Time randnt | 5 5 0.0s Test Summary: | Pass Total Time ∂ operations | 4 4 0.2s Precompiling packages... 992.4 ms ✓ Atomix 870.0 ms ✓ ScopedValues 13649.1 ms ✓ StaticArrays 1415.8 ms ✓ StaticArrays → StaticArraysStatisticsExt 1453.1 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 1385.0 ms ✓ Adapt → AdaptStaticArraysExt 8627.6 ms ✓ KernelAbstractions 2249.7 ms ✓ KernelAbstractions → LinearAlgebraExt 13545.7 ms ✓ NNlib 9 dependencies successfully precompiled in 44 seconds. 24 already precompiled. Precompiling packages... 1551.9 ms ✓ StaticArrayInterface → StaticArrayInterfaceStaticArraysExt 1 dependency successfully precompiled in 2 seconds. 20 already precompiled. Precompiling packages... 1440.3 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 1 dependency successfully precompiled in 1 seconds. 10 already precompiled. Precompiling packages... 1542.7 ms ✓ StructArrays → StructArraysStaticArraysExt 1 dependency successfully precompiled in 2 seconds. 19 already precompiled. Precompiling packages... 4228.0 ms ✓ ForwardDiff → ForwardDiffStaticArraysExt 1 dependency successfully precompiled in 4 seconds. 21 already precompiled. Precompiling packages... 3117.1 ms ✓ KernelAbstractions → SparseArraysExt 1 dependency successfully precompiled in 3 seconds. 29 already precompiled. Precompiling packages... 2370.6 ms ✓ StructArrays → StructArraysGPUArraysCoreExt 1 dependency successfully precompiled in 2 seconds. 36 already precompiled. Precompiling packages... 2905.5 ms ✓ NNlib → NNlibSpecialFunctionsExt 2932.3 ms ✓ NNlib → NNlibForwardDiffExt 2 dependencies successfully precompiled in 6 seconds. 48 already precompiled. Test Summary: | Pass Total Time Binary-Binary RBM partition function (brute force) | 3 3 35.3s Test Summary: | Pass Total Time Spin-Binary RBM partition function (brute force) | 3 3 21.9s Test Summary: | Pass Total Time metropolis β=0.5 | 1 1 11.0s Test Summary: | Pass Total Time metropolis β=1.0 | 1 1 6.9s Test Summary: | Pass Total Time metropolis β=2.0 | 1 1 6.9s Test Summary: | Pass Total Time metropolis! β=0.5 | 1 1 7.4s Test Summary: | Pass Total Time metropolis! β=1.0 | 1 1 6.7s Test Summary: | Pass Total Time metropolis! β=2.0 | 1 1 6.8s Test Summary: | Pass Total Time zerosum (visible Potts) | 5 5 11.2s Test Summary: | Pass Total Time zerosum (hidden Potts) | 5 5 4.0s Test Summary: | Pass Total Time zerosum (visible and hidden Potts) | 7 7 13.5s Test Summary: | Pass Total Time zerosum (visible Potts, various hidden layers) | 28 28 25.5s Test Summary: | Pass Total Time rescale_activations! | 10 10 10.2s Test Summary: | Pass Total Time rescale_hidden! | 6 6 8.8s Test Summary: | Pass Total Time rescale_weights! | 2 2 1.0s Test Summary: | Pass Total Time pcd | 3 3 22.2s Test Summary: | Pass Total Time shift_fields | 8 8 4.6s Test Summary: | Pass Total Time shift_fields! | 8 8 1.1s Test Summary: | Pass Total Time testing RestrictedBoltzmannMachines.Potts | 66 66 3.4s Test Summary: | Pass Total Time testing RestrictedBoltzmannMachines.PottsGumbel | 66 66 14.6s Test Summary: | Pass Total Time discrete layers (RestrictedBoltzmannMachines.Potts) | 2 2 0.2s Test Summary: | Pass Total Time discrete layers (RestrictedBoltzmannMachines.PottsGumbel) | 2 2 2.2s Test Summary: | Pass Total Time PottsGumbel | 6 6 1.2s Test Summary: | Pass Total Time grad2ave RestrictedBoltzmannMachines.Potts | 1 1 0.0s Test Summary: | Pass Total Time grad2ave RestrictedBoltzmannMachines.PottsGumbel | 1 1 1.3s Precompiling packages... 1574.7 ms ✓ MPIPreferences 1462.3 ms ✓ Hwloc_jll 1446.7 ms ✓ libaec_jll 1185.9 ms ✓ MicrosoftMPI_jll 4858.8 ms ✓ MPItrampoline_jll 5175.4 ms ✓ MPICH_jll 4794.5 ms ✓ OpenMPI_jll 5831.3 ms ✓ HDF5_jll 15165.4 ms ✓ HDF5 9 dependencies successfully precompiled in 42 seconds. 34 already precompiled. Precompiling packages... 10082.6 ms ✓ RestrictedBoltzmannMachines → HDF5Ext 1 dependency successfully precompiled in 10 seconds. 72 already precompiled. Test Summary: | Pass Total Time rbm | 5 5 13.9s Test Summary: | Pass Total Time layers | 24 24 1.5s Test Summary: | Pass Total Time Gaussian | 6 6 0.8s Test Summary: | Pass Total Time PottsGumbel | 4 4 0.8s Test Summary: | Pass Total Time std | 12 12 1.9s Test Summary: | Pass Total Time CenteredBinaryRBM | 7 7 2.7s Test Summary: | Pass Total Time center / uncenter | 7 7 1.2s Test Summary: | Pass Total Time rbm energy invariance | 2 2 6.6s Test Summary: | Pass Total Time free energy | 1 1 0.7s Test Summary: | Pass Total Time ∂free energy | 3 3 17.9s Test Summary: | Pass Total Time mirror | 5 5 10.1s ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 720 running 1 of 1 signal (10): User defined signal 1 getindex at ./essentials.jl:965 [inlined] getindex at ./array.jl:963 [inlined] getindex at ./multidimensional.jl:770 [inlined] _broadcast_getindex at ./broadcast.jl:667 [inlined] _getindex at ./broadcast.jl:698 [inlined] _getindex at ./broadcast.jl:697 [inlined] _broadcast_getindex at ./broadcast.jl:673 [inlined] _getindex at ./broadcast.jl:622 [inlined] getindex at ./broadcast.jl:618 [inlined] macro expansion at ./broadcast.jl:997 [inlined] macro expansion at ./simdloop.jl:77 [inlined] copyto! at ./broadcast.jl:996 [inlined] copyto! at ./broadcast.jl:949 [inlined] copy at ./broadcast.jl:921 [inlined] materialize at ./broadcast.jl:896 [inlined] inputs_h_from_v at /home/pkgeval/.julia/packages/RestrictedBoltzmannMachines/TklUE/src/centered.jl:96 sample_h_from_v at /home/pkgeval/.julia/packages/RestrictedBoltzmannMachines/TklUE/src/centered.jl:333 [inlined] sample_v_from_v_once at /home/pkgeval/.julia/packages/RestrictedBoltzmannMachines/TklUE/src/centered.jl:357 [inlined] #sample_v_from_v#138 at /home/pkgeval/.julia/packages/RestrictedBoltzmannMachines/TklUE/src/centered.jl:344 sample_v_from_v at /home/pkgeval/.julia/packages/RestrictedBoltzmannMachines/TklUE/src/centered.jl:342 [inlined] #pcd!#140 at /home/pkgeval/.julia/packages/RestrictedBoltzmannMachines/TklUE/src/centered.jl:419 pcd! at /home/pkgeval/.julia/packages/RestrictedBoltzmannMachines/TklUE/src/centered.jl:368 unknown function (ip: 0x7c0860bca5ad) at (unknown file) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:690 eval_body at /source/src/interpreter.c:550 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:793 jl_eval_toplevel_stmts at /source/src/toplevel.c:622 jl_toplevel_eval_flex at /source/src/toplevel.c:734 ijl_toplevel_eval at /source/src/toplevel.c:805 ijl_toplevel_eval_in at /source/src/toplevel.c:850 eval at ./boot.jl:489 include_string at ./loading.jl:2914 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 _include at ./loading.jl:2974 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 unknown function (ip: 0x7c086320e9e2) at (unknown file) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:690 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:793 jl_eval_toplevel_stmts at /source/src/toplevel.c:622 jl_eval_module_expr at /source/src/toplevel.c:248 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:687 jl_eval_toplevel_stmts at /source/src/toplevel.c:622 jl_toplevel_eval_flex at /source/src/toplevel.c:734 ijl_toplevel_eval at /source/src/toplevel.c:805 ijl_toplevel_eval_in at /source/src/toplevel.c:850 eval at ./boot.jl:489 include_string at ./loading.jl:2914 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 _include at ./loading.jl:2974 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_24410.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:690 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:793 jl_eval_toplevel_stmts at /source/src/toplevel.c:622 jl_toplevel_eval_flex at /source/src/toplevel.c:734 ijl_toplevel_eval at /source/src/toplevel.c:805 ijl_toplevel_eval_in at /source/src/toplevel.c:850 eval at ./boot.jl:489 exec_options at ./client.jl:296 _start at ./client.jl:563 jfptr__start_51780.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7c0882578249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1200 wait_forever at ./task.jl:1137 jfptr_wait_forever_72924.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] start_task at /source/src/task.c:1281 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007abe7708ab30 Total snapshots: 439. Utilization: 0% ╎439 @Base/task.jl:1137 wait_forever() 438╎ 439 @Base/task.jl:1200 wait() [720] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/RestrictedBoltzmannMachines/TklUE/test/centered.jl:111 / at ./float.jl:495 [inlined] logistic at /home/pkgeval/.julia/packages/LogExpFunctions/iNqo2/src/basicfuns.jl:109 [inlined] binary_rand at /home/pkgeval/.julia/packages/RestrictedBoltzmannMachines/TklUE/src/layers/binary.jl:56 [inlined] _broadcast_getindex_evalf at ./broadcast.jl:701 [inlined] _broadcast_getindex at ./broadcast.jl:674 [inlined] _getindex at ./broadcast.jl:622 [inlined] getindex at ./broadcast.jl:618 [inlined] macro expansion at ./broadcast.jl:1032 [inlined] macro expansion at ./simdloop.jl:77 [inlined] copyto! at ./broadcast.jl:1031 [inlined] copyto! at ./broadcast.jl:949 [inlined] copy at ./broadcast.jl:921 [inlined] materialize at ./broadcast.jl:896 [inlined] sample_from_inputs at /home/pkgeval/.julia/packages/RestrictedBoltzmannMachines/TklUE/src/layers/binary.jl:43 sample_v_from_h at /home/pkgeval/.julia/packages/RestrictedBoltzmannMachines/TklUE/src/centered.jl:339 [inlined] sample_v_from_v_once at /home/pkgeval/.julia/packages/RestrictedBoltzmannMachines/TklUE/src/centered.jl:358 [inlined] #sample_v_from_v#138 at /home/pkgeval/.julia/packages/RestrictedBoltzmannMachines/TklUE/src/centered.jl:344 sample_v_from_v at /home/pkgeval/.julia/packages/RestrictedBoltzmannMachines/TklUE/src/centered.jl:342 [inlined] #pcd!#140 at /home/pkgeval/.julia/packages/RestrictedBoltzmannMachines/TklUE/src/centered.jl:419 pcd! at /home/pkgeval/.julia/packages/RestrictedBoltzmannMachines/TklUE/src/centered.jl:368 unknown function (ip: 0x7c0860bca5ad) at (unknown file) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:690 eval_body at /source/src/interpreter.c:550 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:793 jl_eval_toplevel_stmts at /source/src/toplevel.c:622 jl_toplevel_eval_flex at /source/src/toplevel.c:734 ijl_toplevel_eval at /source/src/toplevel.c:805 ijl_toplevel_eval_in at /source/src/toplevel.c:850 eval at ./boot.jl:489 include_string at ./loading.jl:2914 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 _include at ./loading.jl:2974 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 unknown function (ip: 0x7c086320e9e2) at (unknown file) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:690 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:793 jl_eval_toplevel_stmts at /source/src/toplevel.c:622 jl_eval_module_expr at /source/src/toplevel.c:248 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:687 jl_eval_toplevel_stmts at /source/src/toplevel.c:622 jl_toplevel_eval_flex at /source/src/toplevel.c:734 ijl_toplevel_eval at /source/src/toplevel.c:805 ijl_toplevel_eval_in at /source/src/toplevel.c:850 eval at ./boot.jl:489 include_string at ./loading.jl:2914 _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 _include at ./loading.jl:2974 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_24410.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:690 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:793 jl_eval_toplevel_stmts at /source/src/toplevel.c:622 jl_toplevel_eval_flex at /source/src/toplevel.c:734 ijl_toplevel_eval at /source/src/toplevel.c:805 ijl_toplevel_eval_in at /source/src/toplevel.c:850 eval at ./boot.jl:489 exec_options at ./client.jl:296 _start at ./client.jl:563 jfptr__start_51780.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4116 [inlined] ijl_apply_generic at /source/src/gf.c:4313 jl_apply at /source/src/julia.h:2271 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7c0882578249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) Allocations: 998451007 (Pool: 998435932; Big: 15075); GC: 1449 PkgEval terminated after 2730.02s: test duration exceeded the time limit