Package evaluation of NeuralEstimators on Julia 1.13.0-DEV.1176 (573db77327*) started at 2025-09-22T05:26:42.323 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 10.61s ################################################################################ # Installation # Installing NeuralEstimators... Resolving package versions... Installed Glob ──────────────────────── v1.3.1 Installed DefineSingletons ──────────── v0.1.2 Installed InlineStrings ─────────────── v1.4.5 Installed ContextVariablesX ─────────── v0.1.3 Installed MosaicViews ───────────────── v0.3.4 Installed Functors ──────────────────── v0.5.2 Installed FLoops ────────────────────── v0.2.2 Installed NearestNeighbors ──────────── v0.4.22 Installed EnzymeCore ────────────────── v0.8.13 Installed InitialValues ─────────────── v0.3.1 Installed SentinelArrays ────────────── v1.4.8 Installed ArgCheck ──────────────────── v2.5.0 Installed OrderedCollections ────────── v1.8.1 Installed Xorg_libpciaccess_jll ─────── v0.18.1+0 Installed ChainRules ────────────────── v1.72.5 Installed FileIO ────────────────────── v1.17.0 Installed UnitfulAtomic ─────────────── v1.0.0 Installed Distances ─────────────────── v0.10.12 Installed NaNMath ───────────────────── v1.1.3 Installed FLoopsBase ────────────────── v0.1.1 Installed BSON ──────────────────────── v0.3.9 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed PackageExtensionCompat ────── v1.0.2 Installed HDF5_jll ──────────────────── v1.14.6+0 Installed Chemfiles ─────────────────── v0.10.43 Installed InverseFunctions ──────────── v0.1.17 Installed Tables ────────────────────── v1.12.1 Installed TableTraits ───────────────── v1.0.1 Installed ScopedValues ──────────────── v1.5.0 Installed LaTeXStrings ──────────────── v1.4.0 Installed Reexport ──────────────────── v1.2.2 Installed Missings ──────────────────── v1.2.0 Installed Preferences ───────────────── v1.5.0 Installed MappedArrays ──────────────── v0.4.2 Installed Crayons ───────────────────── v4.1.1 Installed SortingAlgorithms ─────────── v1.2.2 Installed Inflate ───────────────────── v0.1.5 Installed RecursiveArrayTools ───────── v3.36.0 Installed MAT ───────────────────────── v0.10.7 Installed MLStyle ───────────────────── v0.4.17 Installed DataStructures ────────────── v0.18.22 Installed MacroTools ────────────────── v0.5.16 Installed Flux ──────────────────────── v0.16.5 Installed URIs ──────────────────────── v1.6.1 Installed DelimitedFiles ────────────── v1.9.1 Installed libaec_jll ────────────────── v1.1.4+0 Installed GNNlib ────────────────────── v1.0.1 Installed StridedViews ──────────────── v0.4.1 Installed DiffResults ───────────────── v1.1.0 Installed FillArrays ────────────────── v1.14.0 Installed LazyModules ───────────────── v0.3.1 Installed AtomsBase ─────────────────── v0.5.1 Installed ArnoldiMethod ─────────────── v0.4.0 Installed ExprTools ─────────────────── v0.1.10 Installed CodecZlib ─────────────────── v0.7.8 Installed Optimisers ────────────────── v0.4.6 Installed ArrayInterface ────────────── v7.20.0 Installed StatsBase ─────────────────── v0.34.6 Installed Zygote ────────────────────── v0.7.10 Installed KrylovKit ─────────────────── v0.9.5 Installed DataValueInterfaces ───────── v1.0.0 Installed LoggingExtras ─────────────── v1.1.0 Installed ConcreteStructs ───────────── v0.2.3 Installed GNNGraphs ─────────────────── v1.4.2 Installed PrettyPrint ───────────────── v0.2.0 Installed CommonSubexpressions ──────── v0.3.1 Installed RealDot ───────────────────── v0.1.0 Installed GPUArraysCore ─────────────── v0.2.0 Installed ColorVectorSpace ──────────── v0.11.0 Installed ArrayLayouts ──────────────── v1.11.2 Installed IrrationalConstants ───────── v0.2.4 Installed NPZ ───────────────────────── v0.4.3 Installed HTTP ──────────────────────── v1.10.17 Installed Infinities ────────────────── v0.1.11 Installed SimpleTraits ──────────────── v0.9.5 Installed BitFlags ──────────────────── v0.1.9 Installed SplittablesBase ───────────── v0.1.15 Installed Hwloc_jll ─────────────────── v2.12.2+0 Installed ImageShow ─────────────────── v0.3.8 Installed OpenMPI_jll ───────────────── v5.0.8+0 Installed Pickle ────────────────────── v0.3.6 Installed BufferedStreams ───────────── v1.2.2 Installed Transducers ───────────────── v0.4.85 Installed GraphNeuralNetworks ───────── v1.0.0 Installed Baselet ───────────────────── v0.1.1 Installed SimpleBufferStream ────────── v1.2.0 Installed Referenceables ────────────── v0.1.3 Installed Scratch ───────────────────── v1.3.0 Installed PooledArrays ──────────────── v1.4.3 Installed Setfield ──────────────────── v1.1.2 Installed BFloat16s ─────────────────── v0.5.1 Installed WorkerUtilities ───────────── v1.6.1 Installed NamedArrays ───────────────── v0.10.4 Installed InfiniteArrays ────────────── v0.14.4 Installed GZip ──────────────────────── v0.6.2 Installed DocStringExtensions ───────── v0.9.5 Installed MLDataDevices ─────────────── v1.12.0 Installed ImageCore ─────────────────── v0.10.5 Installed OneHotArrays ──────────────── v0.2.10 Installed CompositionsBase ──────────── v0.1.2 Installed NameResolution ────────────── v0.1.5 Installed ForwardDiff ───────────────── v1.2.1 Installed StackViews ────────────────── v0.1.2 Installed ZipFile ───────────────────── v0.10.1 Installed MPICH_jll ─────────────────── v4.3.1+0 Installed AliasTables ───────────────── v1.1.3 Installed ConcurrentUtilities ───────── v2.5.0 Installed ThreadedScans ─────────────── v0.1.0 Installed ColorSchemes ──────────────── v3.31.0 Installed MicrosoftMPI_jll ──────────── v10.1.4+3 Installed SparseInverseSubset ───────── v0.1.2 Installed HashArrayMappedTries ──────── v0.2.0 Installed Combinatorics ─────────────── v1.0.3 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed InvertedIndices ───────────── v1.3.1 Installed MLDatasets ────────────────── v0.7.18 Installed RecipesBase ───────────────── v1.3.4 Installed DataAPI ───────────────────── v1.16.0 Installed NNlib ─────────────────────── v0.9.31 Installed MLCore ────────────────────── v1.0.0 Installed MLUtils ───────────────────── v0.4.8 Installed BangBang ──────────────────── v0.4.4 Installed ExternalDocstrings ────────── v0.1.1 Installed StaticArraysCore ──────────── v1.4.3 Installed AbstractFFTs ──────────────── v1.5.0 Installed Colors ────────────────────── v0.13.1 Installed StaticArrays ──────────────── v1.9.15 Installed StringManipulation ────────── v0.4.1 Installed Requires ──────────────────── v1.3.1 Installed ColorTypes ────────────────── v0.12.1 Installed LogExpFunctions ───────────── v0.3.29 Installed Parsers ───────────────────── v2.8.3 Installed UnsafeAtomics ─────────────── v0.3.0 Installed DiffRules ─────────────────── v1.15.1 Installed WeakRefStrings ────────────── v1.4.2 Installed PrettyTables ──────────────── v3.0.10 Installed Unitful ───────────────────── v1.25.0 Installed InternedStrings ───────────── v0.7.0 Installed IRTools ───────────────────── v0.4.15 Installed JLLWrappers ───────────────── v1.7.1 Installed StructTypes ───────────────── v1.11.0 Installed DataFrames ────────────────── v1.8.0 Installed VectorInterface ───────────── v0.5.0 Installed ZygoteRules ───────────────── v0.2.7 Installed ParameterSchedulers ───────── v0.4.3 Installed Chemfiles_jll ─────────────── v0.10.4+0 Installed MicroCollections ──────────── v0.2.0 Installed Accessors ─────────────────── v0.1.42 Installed Folds ─────────────────────── v0.2.10 Installed FilePathsBase ─────────────── v0.9.24 Installed Graphs ────────────────────── v1.13.1 Installed NeuralEstimators ──────────── v0.1.3 Installed PaddedViews ───────────────── v0.5.12 Installed RuntimeGeneratedFunctions ─── v0.5.15 Installed DataDeps ──────────────────── v0.7.13 Installed Adapt ─────────────────────── v4.3.0 Installed ConstructionBase ──────────── v1.6.0 Installed JLD2 ──────────────────────── v0.5.15 Installed ExceptionUnwrapping ───────── v0.1.11 Installed JuliaVariables ────────────── v0.2.4 Installed ProgressLogging ───────────── v0.1.5 Installed PeriodicTable ─────────────── v1.2.1 Installed Compat ────────────────────── v4.18.0 Installed SymbolicIndexingInterface ─── v0.3.38 Installed TranscodingStreams ────────── v0.11.3 Installed TensorCore ────────────────── v0.1.1 Installed Statistics ────────────────── v1.11.1 Installed PrecompileTools ───────────── 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v1.18.0+0 Installed MPItrampoline_jll ─────────── v5.5.4+0 Installed HDF5 ──────────────────────── v0.17.2 Installing 10 artifacts Installed artifact Xorg_libpciaccess 24.8 KiB Installed artifact libaec 49.6 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact MbedTLS 2.1 MiB Installed artifact Chemfiles 1.6 MiB Installed artifact Libiconv 1.9 MiB Installed artifact HDF5 5.7 MiB Installed artifact Hwloc 3.5 MiB Installed artifact MPICH 3.3 MiB Installed artifact XML2 2.5 MiB Updating `~/.julia/environments/v1.13/Project.toml` [38f6df31] + NeuralEstimators v0.1.3 Updating `~/.julia/environments/v1.13/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.20.0 [4c555306] + ArrayLayouts v1.11.2 [a9b6321e] + Atomix v1.1.2 [a963bdd2] + AtomsBase v0.5.1 [ab4f0b2a] + BFloat16s v0.5.1 [fbb218c0] + BSON v0.3.9 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Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 20.42s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4885.1 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:76 Precompiling package dependencies... Precompiling packages... 941.2 ms ✓ Preferences 910.1 ms ✓ JLLWrappers 1011.9 ms ✓ CUDA_Driver_jll 3 dependencies successfully precompiled in 3 seconds. 27 already precompiled. Precompiling packages... 5342.7 ms ✓ CUDA_Runtime_jll 1 dependency successfully precompiled in 6 seconds. 31 already precompiled. ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 242 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1200 wait_forever at ./task.jl:1137 jfptr_wait_forever_27986.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4112 [inlined] ijl_apply_generic at /source/src/gf.c:4309 jl_apply at /source/src/julia.h:2266 [inlined] start_task at /source/src/task.c:1254 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007d9dc1eda2c0 Total snapshots: 464. Utilization: 0% ╎464 @Base/task.jl:1137 wait_forever() 463╎ 464 @Base/task.jl:1200 wait() ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1200 wait_forever at ./task.jl:1137 jfptr_wait_forever_27986.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4112 [inlined] ijl_apply_generic at /source/src/gf.c:4309 jl_apply at /source/src/julia.h:2266 [inlined] start_task at /source/src/task.c:1254 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007bbe01e2b850 Total snapshots: 384. Utilization: 0% ╎384 @Base/task.jl:1137 wait_forever() 383╎ 384 @Base/task.jl:1200 wait() [242] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/precompile.jl:37 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1200 wait_forever at ./task.jl:1137 jfptr_wait_forever_27986.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4112 [inlined] ijl_apply_generic at /source/src/gf.c:4309 jl_apply at /source/src/julia.h:2266 [inlined] start_task at /source/src/task.c:1254 unknown function (ip: (nil)) at (unknown file) Allocations: 16595267 (Pool: 16594144; Big: 1123); GC: 21 [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:152 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1200 wait_forever at ./task.jl:1137 jfptr_wait_forever_27986.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4112 [inlined] ijl_apply_generic at /source/src/gf.c:4309 jl_apply at /source/src/julia.h:2266 [inlined] start_task at /source/src/task.c:1254 unknown function (ip: (nil)) at (unknown file) Allocations: 19878149 (Pool: 19877352; Big: 797); GC: 27 PkgEval terminated after 2753.69s: test duration exceeded the time limit