Package evaluation of ColPack on Julia 1.13.0-DEV.1176 (573db77327*) started at 2025-09-21T12:48:06.811 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 10.03s ################################################################################ # Installation # Installing ColPack... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [ffa27691] + ColPack v0.5.0 Updating `~/.julia/environments/v1.13/Manifest.toml` [ffa27691] + ColPack v0.5.0 [692b3bcd] + JLLWrappers v1.7.1 [21216c6a] + Preferences v1.5.0 [f218ff0c] + ColPack_jll v0.4.3+0 [56f22d72] + Artifacts v1.11.0 [ade2ca70] + Dates v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.13.0 [fa267f1f] + TOML v1.0.3 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.13.1+0 Installation completed after 1.65s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 20.42s ################################################################################ # Testing # Testing ColPack Status `/tmp/jl_wD8yND/Project.toml` [4c88cf16] Aqua v0.8.14 [ffa27691] ColPack v0.5.0 [e30172f5] Documenter v1.14.1 [c3a54625] JET v0.10.7 [4d4711f2] MatrixMarket v0.5.2 [860ef19b] StableRNGs v1.0.3 [37e2e46d] LinearAlgebra v1.13.0 [9a3f8284] Random v1.11.0 [2f01184e] SparseArrays v1.13.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_wD8yND/Manifest.toml` [a4c015fc] ANSIColoredPrinters v0.0.1 [1520ce14] AbstractTrees v0.4.5 [4c88cf16] Aqua v0.8.14 [da1fd8a2] CodeTracking v2.0.1 [944b1d66] CodecZlib v0.7.8 [ffa27691] ColPack v0.5.0 [34da2185] Compat v4.18.0 [807dbc54] Compiler v0.1.1 [ffbed154] DocStringExtensions v0.9.5 [e30172f5] Documenter v1.14.1 [d7ba0133] Git v1.5.0 [b5f81e59] IOCapture v0.2.5 [c3a54625] JET v0.10.7 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v0.21.4 [aa1ae85d] JuliaInterpreter v0.10.5 [70703baa] JuliaSyntax v1.0.2 [0e77f7df] LazilyInitializedFields v1.3.0 [6f1432cf] LoweredCodeUtils v3.4.3 [1914dd2f] MacroTools v0.5.16 [d0879d2d] MarkdownAST v0.1.2 [4d4711f2] MatrixMarket v0.5.2 [69de0a69] Parsers v2.8.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 [2792f1a3] RegistryInstances v0.1.0 [860ef19b] StableRNGs v1.0.3 [3bb67fe8] TranscodingStreams v0.11.3 [f218ff0c] ColPack_jll v0.4.3+0 [2e619515] Expat_jll v2.7.1+0 [020c3dae] Git_LFS_jll v3.7.0+0 [f8c6e375] Git_jll v2.51.1+0 [94ce4f54] Libiconv_jll v1.18.0+0 [9bd350c2] OpenSSH_jll v10.0.2+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.16.0+0 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.9.9 [4536629a] OpenBLAS_jll v0.3.29+0 [458c3c95] OpenSSL_jll v3.5.2+0 [efcefdf7] PCRE2_jll v10.46.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.67.1+0 [3f19e933] p7zip_jll v17.6.0+0 Testing Running tests... Precompiling packages... 1504.6 ms ✓ Git_LFS_jll 1472.5 ms ✓ OpenSSH_jll 1546.8 ms ✓ Git_jll 1012.0 ms ✓ Git 48515.9 ms ✓ Documenter 5 dependencies successfully precompiled in 54 seconds. 49 already precompiled. JET: JET-test failed at /home/pkgeval/.julia/packages/JET/OqLEC/src/JETBase.jl:1113 Expression: (JET.report_package)(ColPack; toplevel_logger = nothing, target_defined_modules = true) ═════ 1 toplevel error found ═════ ┌ @ /home/pkgeval/.julia/packages/ColPack/grwb5/src/ColPack.jl:1 │ ArgumentError: Package ColPack_jll not found in current path. │ - Run `import Pkg; Pkg.add("ColPack_jll")` to install the ColPack_jll package. │ Stacktrace: │ [1] macro expansion │ @ ./loading.jl:2421 [inlined] │ [2] macro expansion │ @ ./lock.jl:376 [inlined] │ [3] __require(into::Module, mod::Symbol) │ @ Base ./loading.jl:2404 │ [4] require │ @ ./loading.jl:2380 [inlined] │ [5] eval_import_path │ @ ./module.jl:36 [inlined] │ [6] eval_import_path_all(at::Module, path::Expr, keyword::String) │ @ Base ./module.jl:60 │ [7] _eval_using(to::Module, path::Expr) │ @ Base ./module.jl:137 └───────────────────── ┌ Warning: Unable to determine HTML(edit_link = ...) from remote HEAD branch, defaulting to "master". │ Calling `git remote` failed with an exception. Set JULIA_DEBUG=Documenter to see the error. │ Unless this is due to a configuration error, the relevant variable should be set explicitly. └ @ Documenter ~/.julia/packages/Documenter/eoWm2/src/utilities/utilities.jl:665 [ Info: SetupBuildDirectory: setting up build directory. [ Info: Doctest: running doctests. [ Info: Skipped ExpandTemplates step (doctest only). [ Info: Skipped CrossReferences step (doctest only). [ Info: Skipped CheckDocument step (doctest only). [ Info: Skipped Populate step (doctest only). [ Info: Skipped RenderDocument step (doctest only). [21] signal 11 (1): Segmentation fault in expression starting at /home/pkgeval/.julia/packages/ColPack/grwb5/test/coloring.jl:80 _ZN7ColPack29BipartiteGraphPartialColoring36PartialDistanceTwoRowColoring_serialEv at /home/pkgeval/.julia/artifacts/b67e35031f029823136202bee346115d7adaf01a/lib/libcolpack.so (unknown line) _ZN7ColPack38BipartiteGraphPartialColoringInterface26PartialDistanceTwoColoringENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEES6_ at /home/pkgeval/.julia/artifacts/b67e35031f029823136202bee346115d7adaf01a/lib/libcolpack.so (unknown line) build_partial_coloring_from_file at /home/pkgeval/.julia/artifacts/b67e35031f029823136202bee346115d7adaf01a/lib/libcolpack.so (unknown line) build_partial_coloring_from_file at /home/pkgeval/.julia/packages/ColPack/grwb5/src/libcolpack.jl:13 [inlined] #ColPackPartialColoring#4 at /home/pkgeval/.julia/packages/ColPack/grwb5/src/colpack_partial_coloring.jl:76 ColPackPartialColoring at /home/pkgeval/.julia/packages/ColPack/grwb5/src/colpack_partial_coloring.jl:65 [inlined] macro expansion at /home/pkgeval/.julia/packages/ColPack/grwb5/test/coloring.jl:88 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.13/Test/src/Test.jl:2033 [inlined] macro expansion at /home/pkgeval/.julia/packages/ColPack/grwb5/test/coloring.jl:83 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.13/Test/src/Test.jl:2033 [inlined] macro expansion at /home/pkgeval/.julia/packages/ColPack/grwb5/test/coloring.jl:82 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.13/Test/src/Test.jl:2033 [inlined] macro expansion at /home/pkgeval/.julia/packages/ColPack/grwb5/test/coloring.jl:81 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.13/Test/src/Test.jl:1952 [inlined] top-level scope at /home/pkgeval/.julia/packages/ColPack/grwb5/test/coloring.jl:81 _jl_invoke at /source/src/gf.c:4112 [inlined] ijl_invoke at /source/src/gf.c:4119 jl_toplevel_eval_flex at /source/src/toplevel.c:761 jl_toplevel_eval_flex at /source/src/toplevel.c:712 ijl_toplevel_eval at /source/src/toplevel.c:784 ijl_toplevel_eval_in at /source/src/toplevel.c:829 eval at ./boot.jl:489 include_string at ./loading.jl:2915 _jl_invoke at /source/src/gf.c:4112 [inlined] ijl_apply_generic at /source/src/gf.c:4309 _include at ./loading.jl:2975 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_60404.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4112 [inlined] ijl_apply_generic at /source/src/gf.c:4309 jl_apply at /source/src/julia.h:2266 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:690 eval_body at /source/src/interpreter.c:550 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:550 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:772 jl_toplevel_eval_flex at /source/src/toplevel.c:712 ijl_toplevel_eval at /source/src/toplevel.c:784 ijl_toplevel_eval_in at /source/src/toplevel.c:829 eval at ./boot.jl:489 include_string at ./loading.jl:2915 _jl_invoke at /source/src/gf.c:4112 [inlined] ijl_apply_generic at /source/src/gf.c:4309 _include at ./loading.jl:2975 include at ./Base.jl:310 IncludeInto at ./Base.jl:311 jfptr_IncludeInto_60404.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4112 [inlined] ijl_apply_generic at /source/src/gf.c:4309 jl_apply at /source/src/julia.h:2266 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:690 jl_interpret_toplevel_thunk at /source/src/interpreter.c:899 jl_toplevel_eval_flex at /source/src/toplevel.c:772 jl_toplevel_eval_flex at /source/src/toplevel.c:712 ijl_toplevel_eval at /source/src/toplevel.c:784 ijl_toplevel_eval_in at /source/src/toplevel.c:829 eval at ./boot.jl:489 exec_options at ./client.jl:296 _start at ./client.jl:563 jfptr__start_55122.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4112 [inlined] ijl_apply_generic at /source/src/gf.c:4309 jl_apply at /source/src/julia.h:2266 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1138 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x741ed6e41249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S Allocations: 70449535 (Pool: 70449084; Big: 451); GC: 28 Testing failed after 294.06s ERROR: LoadError: Package ColPack errored during testing (received signal: 11) Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2673 [3] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2522 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:538 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:515 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:168 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:157 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [9] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:155 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [12] include(mod::Module, _path::String) @ Base ./Base.jl:309 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:330 [14] _start() @ Base ./client.jl:563 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval crashed after 342.29s: a segmentation fault happened ################################################################################ # Bug reporting # The package crashed during testing (reason=segfault), but PkgEval was unable to reproduce the crash under rr (status=fail, reason=missing_package). For debugging, here is the tail end of the rr log: > │ ArgumentError: Package ColPack_jll not found in current path. > │ - Run `import Pkg; Pkg.add("ColPack_jll")` to install the ColPack_jll package. > │ Stacktrace: > │ [1] macro expansion > │ @ ./loading.jl:2421 [inlined] > │ [2] macro expansion > │ @ ./lock.jl:376 [inlined] > │ [3] __require(into::Module, mod::Symbol) > │ @ Base ./loading.jl:2404 > │ [4] require > │ @ ./loading.jl:2380 [inlined] > │ [5] eval_import_path > │ @ ./module.jl:36 [inlined] > │ [6] eval_import_path_all(at::Module, path::Expr, keyword::String) > │ @ Base ./module.jl:60 > │ [7] _eval_using(to::Module, path::Expr) > │ @ Base ./module.jl:137 > └───────────────────── > > ┌ Warning: Unable to determine HTML(edit_link = ...) from remote HEAD branch, defaulting to "master". > │ Calling `git remote` failed with an exception. Set JULIA_DEBUG=Documenter to see the error. > │ Unless this is due to a configuration error, the relevant variable should be set explicitly. > └ @ Documenter ~/.julia/packages/Documenter/eoWm2/src/utilities/utilities.jl:665 > [ Info: SetupBuildDirectory: setting up build directory. > [ Info: Doctest: running doctests. > [ Info: Skipped ExpandTemplates step (doctest only). > [ Info: Skipped CrossReferences step (doctest only). > [ Info: Skipped CheckDocument step (doctest only). > [ Info: Skipped Populate step (doctest only). > [ Info: Skipped RenderDocument step (doctest only). > Test Summary: | Pass Fail Total Time > ColPack | 22170 1 22171 4m27.6s > Code quality | 11 1 12 2m50.4s > Method ambiguity | 1 1 16.7s > Unbound type parameters | 1 1 0.1s > Undefined exports | 1 1 0.0s > Compare Project.toml and test/Project.toml | 1 1 0.4s > Stale dependencies | 1 1 5.8s > Compat bounds | 4 4 0.7s > Piracy | 1 1 0.2s > Persistent tasks | 1 1 29.4s > JET | 1 1 1m42.9s > Doctests | 1 1 1m14.0s > Coloring | 22147 22147 22.9s > General graph coloring | 11088 11088 8.6s > DISTANCE_ONE | 1584 1584 6.2s > ACYCLIC | 1584 1584 0.6s > ACYCLIC_FOR_INDIRECT_RECOVERY | 1584 1584 0.5s > STAR | 1584 1584 0.3s > NAIVE_STAR | 1584 1584 0.4s > RESTRICTED_STAR | 1584 1584 0.3s > DISTANCE_TWO | 1584 1584 0.3s > Bipartite graph partial coloring | 5683 5683 2.4s > COLUMN_PARTIAL_DISTANCE_TWO | 2848 2848 1.9s > ROW_PARTIAL_DISTANCE_TWO | 2835 2835 0.5s > Bipartite graph bicoloring | 5376 5376 2.5s > IMPLICIT_COVERING__STAR_BICOLORING | 1344 1344 0.6s > EXPLICIT_COVERING__STAR_BICOLORING | 1344 1344 0.6s > EXPLICIT_COVERING__MODIFIED_STAR_BICOLORING | 1344 1344 0.5s > IMPLICIT_COVERING__GREEDY_STAR_BICOLORING | 1344 1344 0.8s > Exceptions | 11 11 0.4s > RNG of the outermost testset: Xoshiro(0x9e0a7809c3f156e2, 0x26d8749453b30f0e, 0x114191ce0a563e40, 0xdd57a4ac0eeb997f, 0x76412f815b2aedc5) > ERROR: LoadError: Some tests did not pass: 22170 passed, 1 failed, 0 errored, 0 broken. > in expression starting at /home/pkgeval/.julia/packages/ColPack/grwb5/test/runtests.jl:7 > > Testing failed after 319.82s > > ERROR: LoadError: Package ColPack errored during testing > Stacktrace: > [1] pkgerror(msg::String) > @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68 > [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) > @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2673 > [3] test > @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2522 [inlined] > [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) > @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:538 > [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) > @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:515 > [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) > @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:168 > [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) > @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:157 > [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) > @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 > [9] test > @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [inlined] > [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) > @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:155 > [11] top-level scope > @ /PkgEval.jl/scripts/evaluate.jl:217 > [12] include(mod::Module, _path::String) > @ Base ./Base.jl:309 > [13] exec_options(opts::Base.JLOptions) > @ Base ./client.jl:330 > [14] _start() > @ Base ./client.jl:563 > in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 > > PkgEval failed after 409.15s: package is using an unknown package