Package evaluation of StructuralIdentifiability on Julia 1.13.0-DEV.1080 (ed57414aec*) started at 2025-09-04T14:49:37.128 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 10.17s ################################################################################ # Installation # Installing StructuralIdentifiability... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [220ca800] + StructuralIdentifiability v0.5.16 Updating `~/.julia/environments/v1.13/Manifest.toml` ⌅ [c3fe647b] + AbstractAlgebra v0.44.13 [a9b6321e] + Atomix v1.1.2 [861a8166] + Combinatorics v1.0.3 [864edb3b] + DataStructures v0.19.1 [e2ba6199] + ExprTools v0.1.10 [0b43b601] + Groebner v0.9.5 [18e54dd8] + IntegerMathUtils v0.1.3 [c8e1da08] + IterTools v1.10.0 [692b3bcd] + JLLWrappers v1.7.1 [1914dd2f] + MacroTools v0.5.16 ⌅ [2edaba10] + Nemo v0.49.5 [bac558e1] + OrderedCollections v1.8.1 [3e851597] + ParamPunPam v0.5.2 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [27ebfcd6] + Primes v0.5.7 [92933f4c] + ProgressMeter v1.11.0 [fb686558] + RandomExtensions v0.4.4 [220ca800] + StructuralIdentifiability v0.5.16 [a759f4b9] + TimerOutputs v0.5.29 [013be700] + UnsafeAtomics v0.3.0 ⌅ [e134572f] + FLINT_jll v300.200.201+0 [656ef2d0] + OpenBLAS32_jll v0.3.29+0 [56f22d72] + Artifacts v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [fa267f1f] + TOML v1.0.3 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [781609d7] + GMP_jll v6.3.0+2 [3a97d323] + MPFR_jll v4.2.2+0 [4536629a] + OpenBLAS_jll v0.3.29+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.13.1+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 5.69s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 216.61s ################################################################################ # Testing # Testing StructuralIdentifiability Status `/tmp/jl_rwfaVG/Project.toml` ⌅ [c3fe647b] AbstractAlgebra v0.44.13 [4c88cf16] Aqua v0.8.14 [2a0fbf3d] CPUSummary v0.2.7 [861a8166] Combinatorics v1.0.3 [864edb3b] DataStructures v0.19.1 [0b43b601] Groebner v0.9.5 [c8e1da08] IterTools v1.10.0 [1914dd2f] MacroTools v0.5.16 ⌅ [2edaba10] Nemo v0.49.5 [3e851597] ParamPunPam v0.5.2 [aea7be01] PrecompileTools v1.3.3 [27ebfcd6] Primes v0.5.7 [276daf66] SpecialFunctions v2.5.1 [220ca800] StructuralIdentifiability v0.5.16 ⌅ [98d24dd4] TestSetExtensions v2.0.0 [a759f4b9] TimerOutputs v0.5.29 [ade2ca70] Dates v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [44cfe95a] Pkg v1.13.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_rwfaVG/Manifest.toml` ⌅ [c3fe647b] AbstractAlgebra v0.44.13 [4c88cf16] Aqua v0.8.14 [a9b6321e] Atomix v1.1.2 [2a0fbf3d] CPUSummary v0.2.7 [861a8166] Combinatorics v1.0.3 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.18.0 [adafc99b] CpuId v0.3.1 [864edb3b] DataStructures v0.19.1 [ab62b9b5] DeepDiffs v1.2.0 [ffbed154] DocStringExtensions v0.9.5 [e2ba6199] ExprTools v0.1.10 [0b43b601] Groebner v0.9.5 [615f187c] IfElse v0.1.1 [18e54dd8] IntegerMathUtils v0.1.3 [92d709cd] IrrationalConstants v0.2.4 [c8e1da08] IterTools v1.10.0 [692b3bcd] JLLWrappers v1.7.1 [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.16 ⌅ [2edaba10] Nemo v0.49.5 [bac558e1] OrderedCollections v1.8.1 [3e851597] ParamPunPam v0.5.2 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 [27ebfcd6] Primes v0.5.7 [92933f4c] ProgressMeter v1.11.0 [fb686558] RandomExtensions v0.4.4 [276daf66] SpecialFunctions v2.5.1 [aedffcd0] Static v1.2.0 [220ca800] StructuralIdentifiability v0.5.16 ⌅ [98d24dd4] TestSetExtensions v2.0.0 [a759f4b9] TimerOutputs v0.5.29 [013be700] UnsafeAtomics v0.3.0 ⌅ [e134572f] FLINT_jll v300.200.201+0 [656ef2d0] OpenBLAS32_jll v0.3.29+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [781609d7] GMP_jll v6.3.0+2 [deac9b47] LibCURL_jll v8.15.0+1 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [3a97d323] MPFR_jll v4.2.2+0 [14a3606d] MozillaCACerts_jll v2025.8.12 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.2+0 [efcefdf7] PCRE2_jll v10.46.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.67.0+0 [3f19e933] p7zip_jll v17.6.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling packages... 8653.9 ms ✓ AbstractAlgebra → TestExt 1 dependency successfully precompiled in 9 seconds. 18 already precompiled. Precompiling packages... 1271.7 ms ✓ OpenSpecFun_jll 5016.7 ms ✓ SpecialFunctions 2 dependencies successfully precompiled in 6 seconds. 10 already precompiled. Resolving package versions... Updating `/tmp/jl_rwfaVG/Project.toml` ⌅ [864edb3b] ↓ DataStructures v0.19.1 ⇒ v0.18.22 [loaded: v0.19.1] [961ee093] + ModelingToolkit v10.21.0 Updating `/tmp/jl_rwfaVG/Manifest.toml` [47edcb42] + ADTypes v1.17.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.20.0 [4c555306] + ArrayLayouts v1.11.2 [e2ed5e7c] + Bijections v0.2.2 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [8e7c35d0] + BlockArrays v1.7.1 [70df07ce] + BracketingNonlinearSolve v1.3.0 [d360d2e6] + ChainRulesCore v1.26.0 [fb6a15b2] + CloseOpenIntervals v0.1.13 [a80b9123] + CommonMark v0.9.1 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [b152e2b5] + CompositeTypes v0.1.4 [a33af91c] + CompositionsBase v0.1.2 [2569d6c7] + ConcreteStructs v0.2.3 [187b0558] + ConstructionBase v1.6.0 [9a962f9c] + DataAPI v1.16.0 ⌅ [864edb3b] ↓ DataStructures v0.19.1 ⇒ v0.18.22 [loaded: v0.19.1] [2b5f629d] + DiffEqBase v6.188.0 [459566f4] + DiffEqCallbacks v4.9.0 [77a26b50] + DiffEqNoiseProcess v5.24.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.7 [8d63f2c5] + DispatchDoctor v0.4.26 [31c24e10] + Distributions v0.25.120 [5b8099bc] + DomainSets v0.7.16 [7c1d4256] + DynamicPolynomials v0.6.3 [06fc5a27] + DynamicQuantities v1.8.0 [4e289a0a] + EnumX v1.0.5 [f151be2c] + EnzymeCore v0.8.13 [55351af7] + ExproniconLite v0.10.14 [7034ab61] + FastBroadcast v0.3.5 [9aa1b823] + FastClosures v0.3.2 [a4df4552] + FastPower v1.1.3 [1a297f60] + FillArrays v1.13.0 [64ca27bc] + FindFirstFunctions v1.4.1 [6a86dc24] + FiniteDiff v2.28.1 [1fa38f19] + Format v1.3.7 [f6369f11] + ForwardDiff v1.1.0 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 [d9f16b24] + Functors v0.5.2 [46192b85] + GPUArraysCore v0.2.0 [c27321d9] + Glob v1.3.1 [86223c79] + Graphs v1.13.1 [34004b35] + HypergeometricFunctions v0.3.28 [3263718b] + ImplicitDiscreteSolve v1.2.0 [d25df0c9] + Inflate v0.1.5 [8197267c] + IntervalSets v0.7.11 [3587e190] + InverseFunctions v0.1.17 [82899510] + IteratorInterfaceExtensions v1.0.0 [ae98c720] + Jieko v0.2.1 [98e50ef6] + JuliaFormatter v2.1.6 ⌅ [70703baa] + JuliaSyntax v0.4.10 [ccbc3e58] + JumpProcesses v9.17.0 [b964fa9f] + LaTeXStrings v1.4.0 [23fbe1c1] + Latexify v0.16.9 [10f19ff3] + LayoutPointers v0.1.17 [87fe0de2] + LineSearch v0.1.4 [d3d80556] + LineSearches v7.4.0 [d8e11817] + MLStyle v0.4.17 [d125e4d3] + ManualMemory v0.1.8 [bb5d69b7] + MaybeInplace v0.1.4 [e1d29d7a] + Missings v1.2.0 [961ee093] + ModelingToolkit v10.21.0 [2e0e35c7] + Moshi v0.3.7 [46d2c3a1] + MuladdMacro v0.2.4 ⌃ [102ac46a] + MultivariatePolynomials v0.5.9 [d8a4904e] + MutableArithmetics v1.6.4 [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.3 [be0214bd] + NonlinearSolveBase v1.14.0 [6fe1bfb0] + OffsetArrays v1.17.0 [429524aa] + Optim v1.13.2 [bbf590c4] + OrdinaryDiffEqCore v1.32.0 [90014a1f] + PDMats v0.11.35 [d96e819e] + Parameters v0.12.3 [e409e4f3] + PoissonRandom v0.4.6 [f517fe37] + Polyester v0.7.18 [1d0040c9] + PolyesterWeave v0.2.2 [85a6dd25] + PositiveFactorizations v0.2.4 [d236fae5] + PreallocationTools v0.4.34 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [74087812] + Random123 v1.7.1 [e6cf234a] + RandomNumbers v1.6.0 [3cdcf5f2] + RecipesBase v1.3.4 [731186ca] + RecursiveArrayTools v3.37.1 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [ae5879a3] + ResettableStacks v1.1.1 [79098fc4] + Rmath v0.8.0 [7e49a35a] + RuntimeGeneratedFunctions v0.5.15 [9dfe8606] + SCCNonlinearSolve v1.4.0 [94e857df] + SIMDTypes v0.1.0 [0bca4576] + SciMLBase v2.116.3 [19f34311] + SciMLJacobianOperators v0.1.11 [c0aeaf25] + SciMLOperators v1.7.1 [431bcebd] + SciMLPublic v1.0.0 [53ae85a6] + SciMLStructures v1.7.0 [efcf1570] + Setfield v1.1.2 [727e6d20] + SimpleNonlinearSolve v2.7.0 [699a6c99] + SimpleTraits v0.9.5 [ce78b400] + SimpleUnPack v1.1.0 [a2af1166] + SortingAlgorithms v1.2.2 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.6 [4c63d2b9] + StatsFuns v1.5.0 [7792a7ef] + StrideArraysCore v0.5.8 [2efcf032] + SymbolicIndexingInterface v0.3.43 [19f23fe9] + SymbolicLimits v0.2.2 ⌃ [d1185830] + SymbolicUtils v3.31.0 [0c5d862f] + Symbolics v6.53.0 [ed4db957] + TaskLocalValues v0.1.3 [8ea1fca8] + TermInterface v2.0.0 [1c621080] + TestItems v1.0.0 [8290d209] + ThreadingUtilities v0.5.5 [410a4b4d] + Tricks v0.1.12 [781d530d] + TruncatedStacktraces v1.4.0 [5c2747f8] + URIs v1.6.1 [3a884ed6] + UnPack v1.0.2 [1986cc42] + Unitful v1.24.0 [a7c27f48] + Unityper v0.1.6 [f50d1b31] + Rmath_jll v0.5.1+0 [9fa8497b] + Future v1.11.0 [a63ad114] + Mmap v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [4607b0f0] + SuiteSparse Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Resolving package versions... Updating `/tmp/jl_rwfaVG/Project.toml` [0c5d862f] + Symbolics v6.53.0 Manifest No packages added to or removed from `/tmp/jl_rwfaVG/Manifest.toml` Precompiling packages... 5321.8 ms ✓ CommonSubexpressions 6297.8 ms ✓ Latexify 1967.5 ms ✓ SimpleTraits 3331.7 ms ✓ DispatchDoctor 1549.4 ms ✓ TruncatedStacktraces 1922.2 ms ✓ Accessors → UnitfulExt 1315.9 ms ✓ MaybeInplace 13138.0 ms ✓ CommonMark 2332.5 ms ✓ CPUSummary 1325.5 ms ✓ Rmath_jll 4449.5 ms ✓ SciMLOperators 2521.6 ms ✓ SymbolicIndexingInterface 1455.9 ms ✓ FiniteDiff → FiniteDiffStaticArraysExt 12854.5 ms ✓ MultivariatePolynomials 1583.0 ms ✓ ResettableStacks 1719.6 ms ✓ DifferentiationInterface → DifferentiationInterfaceStaticArraysExt 1722.7 ms ✓ Accessors → StaticArraysExt 999.8 ms ✓ BitTwiddlingConvenienceFunctions 2630.7 ms ✓ CloseOpenIntervals 2835.8 ms ✓ LayoutPointers 4503.6 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 2601.6 ms ✓ HypergeometricFunctions 9384.0 ms ✓ ForwardDiff 2575.7 ms ✓ Latexify → SparseArraysExt 13149.9 ms ✓ Graphs 2838.7 ms ✓ DispatchDoctor → DispatchDoctorChainRulesCoreExt 1344.7 ms ✓ DispatchDoctor → DispatchDoctorEnzymeCoreExt 12843.4 ms ✓ DynamicQuantities 1370.5 ms ✓ MaybeInplace → MaybeInplaceSparseArraysExt 59236.3 ms ✓ JuliaFormatter 1585.1 ms ✓ Rmath 1118.7 ms ✓ SciMLOperators → SciMLOperatorsStaticArraysCoreExt 1631.0 ms ✓ SciMLOperators → SciMLOperatorsSparseArraysExt 3973.8 ms ✓ RecursiveArrayTools 4880.9 ms ✓ DynamicPolynomials 1887.7 ms ✓ PolyesterWeave 2054.6 ms ✓ StrideArraysCore 4681.8 ms ✓ ForwardDiff → ForwardDiffStaticArraysExt 3259.8 ms ✓ FastPower → FastPowerForwardDiffExt 1600.7 ms ✓ DifferentiationInterface → DifferentiationInterfaceForwardDiffExt 2719.9 ms ✓ Unitful → ForwardDiffExt 1371.1 ms ✓ PreallocationTools → PreallocationToolsForwardDiffExt 1814.8 ms ✓ DynamicQuantities → DynamicQuantitiesLinearAlgebraExt 3997.6 ms ✓ DynamicQuantities → DynamicQuantitiesUnitfulExt 2790.3 ms ✓ StatsFuns 1687.6 ms ✓ RecursiveArrayTools → RecursiveArrayToolsSparseArraysExt 9838.5 ms ✓ RecursiveArrayTools → RecursiveArrayToolsForwardDiffExt 31694.5 ms ✓ SciMLBase 84074.6 ms ✓ SymbolicUtils 2617.3 ms ✓ Polyester 8529.0 ms ✓ NLSolversBase 2906.8 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 949.5 ms ✓ StatsFuns → StatsFunsInverseFunctionsExt 8070.0 ms ✓ Distributions 6153.7 ms ✓ SciMLBase → SciMLBaseChainRulesCoreExt 6268.5 ms ✓ SciMLBase → SciMLBaseForwardDiffExt 4053.2 ms ✓ SciMLBase → SciMLBaseMLStyleExt 8252.2 ms ✓ SciMLJacobianOperators 3495.0 ms ✓ SCCNonlinearSolve 8587.7 ms ✓ SymbolicLimits 2838.6 ms ✓ FastBroadcast 6754.8 ms ✓ LineSearches 4003.7 ms ✓ Distributions → DistributionsTestExt 3522.2 ms ✓ Distributions → DistributionsChainRulesCoreExt 4851.2 ms ✓ SciMLBase → SciMLBaseDistributionsExt 10571.6 ms ✓ LineSearch 16108.6 ms ✓ NonlinearSolveBase 2648.7 ms ✓ RecursiveArrayTools → RecursiveArrayToolsFastBroadcastExt 11064.8 ms ✓ Optim 133161.0 ms ✓ Symbolics 3600.8 ms ✓ LineSearch → LineSearchLineSearchesExt 3961.3 ms ✓ NonlinearSolveBase → NonlinearSolveBaseSparseArraysExt 3214.9 ms ✓ NonlinearSolveBase → NonlinearSolveBaseLineSearchExt 35347.9 ms ✓ NonlinearSolveBase → NonlinearSolveBaseForwardDiffExt 8762.6 ms ✓ BracketingNonlinearSolve 11453.1 ms ✓ DiffEqBase 14624.6 ms ✓ Symbolics → SymbolicsForwardDiffExt 10594.4 ms ✓ DifferentiationInterface → DifferentiationInterfaceSymbolicsExt 3863.0 ms ✓ BracketingNonlinearSolve → BracketingNonlinearSolveForwardDiffExt 4376.8 ms ✓ DiffEqBase → DiffEqBaseSparseArraysExt 5222.5 ms ✓ DiffEqBase → DiffEqBaseUnitfulExt 4433.4 ms ✓ DiffEqBase → DiffEqBaseChainRulesCoreExt 6835.6 ms ✓ DiffEqBase → DiffEqBaseForwardDiffExt 11035.7 ms ✓ OrdinaryDiffEqCore 10566.4 ms ✓ DiffEqCallbacks 21456.2 ms ✓ NonlinearSolveBase → NonlinearSolveBaseDiffEqBaseExt 17204.4 ms ✓ Symbolics → SymbolicsPreallocationToolsExt 22774.8 ms ✓ BracketingNonlinearSolve → BracketingNonlinearSolveChainRulesCoreExt 55181.2 ms ✓ SimpleNonlinearSolve 127381.9 ms ✓ DiffEqNoiseProcess 17730.3 ms ✓ OrdinaryDiffEqCore → OrdinaryDiffEqCoreEnzymeCoreExt 46010.5 ms ✓ JumpProcesses 89422.2 ms ✓ SimpleNonlinearSolve → SimpleNonlinearSolveDiffEqBaseExt 3882.3 ms ✓ SimpleNonlinearSolve → SimpleNonlinearSolveChainRulesCoreExt 13521.5 ms ✓ ImplicitDiscreteSolve Info Given ModelingToolkit was explicitly requested, output will be shown live  WARNING: llvmcall with integer pointers is deprecated. Use actual pointers instead, replacing i32 or i64 with i8* or ptr in var"#bareiss_update_virtual_colswap_mtk!#1429"(Any, typeof(ModelingToolkit.bareiss_update_virtual_colswap_mtk!), Any, ModelingToolkit.SparseMatrixCLIL{T, Ti} where Ti<:Integer where T, Any, Any, Any, Any) at /home/pkgeval/.julia/packages/ModelingToolkit/hlGut/src/systems/sparsematrixclil.jl ┌ Warning: `enqueue!(q::Queue, x)` is deprecated, use `Base.push!(q, x)` instead. │ caller = topsort_equations(eqs::Vector{Symbolics.Equation}, unknowns::Vector{SymbolicUtils.BasicSymbolic}; check::Bool) at alias_elimination.jl:429 └ @ Core ~/.julia/packages/ModelingToolkit/hlGut/src/systems/alias_elimination.jl:429 ┌ Warning: `dequeue!(q::Queue)` is deprecated, use `Base.popfirst!(q)` instead. │ caller = topsort_equations(eqs::Vector{Symbolics.Equation}, unknowns::Vector{SymbolicUtils.BasicSymbolic}; check::Bool) at alias_elimination.jl:436 └ @ Core ~/.julia/packages/ModelingToolkit/hlGut/src/systems/alias_elimination.jl:436 687325.2 ms ✓ ModelingToolkit 96 dependencies successfully precompiled in 1845 seconds. 172 already precompiled. 3 dependencies had output during precompilation: ┌ ModelingToolkit │ [Output was shown above] └ ┌ Graphs │ WARNING: importing deprecated binding DataStructures.IntDisjointSets into Graphs. │ , use IntDisjointSet instead. └ ┌ JumpProcesses │ WARNING: importing deprecated binding DataStructures.IntDisjointSets into Graphs. │ , use IntDisjointSet instead. └ Precompiling packages... 3945.2 ms ✓ DataStructures 9483.8 ms ✓ Groebner → GroebnerDynamicPolynomialsExt 2 dependencies successfully precompiled in 14 seconds. 43 already precompiled. 1 dependency precompiled but a different version is currently loaded. Restart julia to access the new version. Otherwise, loading dependents of this package may trigger further precompilation to work with the unexpected version. Precompiling packages... Info Given SymbolicsNemoExt was explicitly requested, output will be shown live  [ Info: Assuming ((1//128)*(√((5120//1)*(a^4)) - (80//1)*(a^2))) != 0 [ Info: Assuming ((1//128)*(√((5120//1)*(a^4)) - (80//1)*(a^2))) != 0 105717.4 ms ✓ Symbolics → SymbolicsNemoExt 1 dependency successfully precompiled in 108 seconds. 156 already precompiled. 1 dependency had output during precompilation: ┌ Symbolics → SymbolicsNemoExt │ [Output was shown above] └ Precompiling packages... 17815.0 ms ✓ Symbolics → SymbolicsGroebnerExt 1 dependency successfully precompiled in 21 seconds. 161 already precompiled. Precompiling packages... 38828.0 ms ✓ ModelingToolkit → MTKDeepDiffsExt 1 dependency successfully precompiled in 41 seconds. 269 already precompiled. Precompiling packages... 49031.1 ms ✓ StructuralIdentifiability → ModelingToolkitSIExt 1 dependency successfully precompiled in 51 seconds. 286 already precompiled. [ Info: Testing started [ Info: Summary of the model: [ Info: State variables: x1, x2 [ Info: Parameters: a [ Info: Inputs: [ Info: Outputs: y ┌ Warning: New variable c, treating as a scalar parameter └ @ StructuralIdentifiability ~/.julia/packages/StructuralIdentifiability/0tPYp/src/pb_representation.jl:94 [ Info: Summary of the model: [ Info: State variables: x1, x2, x3 [ Info: Parameters: a [ Info: Inputs: u [ Info: Outputs: y1, y2 ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 43 running 1 of 1 signal (10): User defined signal 1 _ZN4llvm5APIntaSEOS0_.isra.0 at /opt/julia/bin/../lib/julia/libLLVM.so.20.1jl (unknown line) unknown function (ip: 0x7ffdc4ce195f) at (unknown file) unknown function (ip: 0x3f) at (unknown file) unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile. --trace-compile is enabled during profile collection. ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1200 wait_forever at ./task.jl:1137 jfptr_wait_forever_44650.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3985 [inlined] ijl_apply_generic at /source/src/gf.c:4198 jl_apply at /source/src/julia.h:2382 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point. Disabling --trace-compile ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007520a92baa40 Total snapshots: 433. Utilization: 0% ╎433 @Base/task.jl:1137 wait_forever() 432╎ 433 @Base/task.jl:1200 wait() [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1200 wait_forever at ./task.jl:1137 jfptr_wait_forever_44650.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3985 [inlined] ijl_apply_generic at /source/src/gf.c:4198 jl_apply at /source/src/julia.h:2382 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) Allocations: 23113889 (Pool: 23113265; Big: 624); GC: 19 [43] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/StructuralIdentifiability/0tPYp/test/constructive_membership.jl:1 PkgEval terminated after 2738.26s: test duration exceeded the time limit