Package evaluation of Packmol on Julia 1.13.0-DEV.1080 (ed57414aec*) started at 2025-09-04T20:04:15.170


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 9.88s


################################################################################
# Installation
#

Installing Packmol...
   Resolving package versions...
    Updating `~/.julia/environments/v1.13/Project.toml`
  [6cdf86f9] + Packmol v0.1.12
    Updating `~/.julia/environments/v1.13/Manifest.toml`
  [69e1c6dd] + CellListMap v0.9.11
  [ae650224] + ChunkSplitters v3.1.2
  [34da2185] + Compat v4.18.0
  [187b0558] + ConstructionBase v1.6.0
  [ffbed154] + DocStringExtensions v0.9.5
  [48062228] + FilePathsBase v0.9.24
  [692b3bcd] + JLLWrappers v1.7.1
  [1914dd2f] + MacroTools v0.5.16
  [e1fe445b] + NativeFileDialog v0.2.1
  [bac558e1] + OrderedCollections v1.8.1
  [6cdf86f9] + Packmol v0.1.12
  [d96e819e] + Parameters v0.12.3
  [aea7be01] + PrecompileTools v1.3.3
  [21216c6a] + Preferences v1.5.0
  [92933f4c] + ProgressMeter v1.11.0
  [bf97046b] + SPGBox v0.7.2
  [efcf1570] + Setfield v1.1.2
  [90137ffa] + StaticArrays v1.9.15
  [1e83bf80] + StaticArraysCore v1.4.3
  [10745b16] + Statistics v1.11.1
  [1c621080] + TestItems v1.0.0
  [3a884ed6] + UnPack v1.0.2
  [7b86fcea] + ATK_jll v2.38.1+0
  [6e34b625] + Bzip2_jll v1.0.9+0
  [83423d85] + Cairo_jll v1.18.5+0
  [ee1fde0b] + Dbus_jll v1.16.2+0
  [2702e6a9] + EpollShim_jll v0.0.20230411+1
  [2e619515] + Expat_jll v2.7.1+0
  [a3f928ae] + Fontconfig_jll v2.17.1+0
  [d7e528f0] + FreeType2_jll v2.13.4+0
  [559328eb] + FriBidi_jll v1.0.17+0
  [77ec8976] + GTK3_jll v3.24.31+0
  [b0724c58] + GettextRuntime_jll v0.22.4+0
  [7746bdde] + Glib_jll v2.84.3+0
  [3b182d85] + Graphite2_jll v1.3.15+0
  [2e76f6c2] + HarfBuzz_jll v8.5.1+0
  [aacddb02] + JpegTurbo_jll v3.1.2+0
  [88015f11] + LERC_jll v4.0.1+0
  [1d63c593] + LLVMOpenMP_jll v18.1.8+0
  [dd4b983a] + LZO_jll v2.10.3+0
  [42c93a91] + Libepoxy_jll v1.5.11+0
  [e9f186c6] + Libffi_jll v3.4.7+0
  [7e76a0d4] + Libglvnd_jll v1.7.1+1
  [94ce4f54] + Libiconv_jll v1.18.0+0
  [4b2f31a3] + Libmount_jll v2.41.1+0
  [89763e89] + Libtiff_jll v4.7.1+0
  [38a345b3] + Libuuid_jll v2.41.1+0
  [94d9ae2c] + NativeFileDialog_jll v1.1.6+3
  [eb89d173] + Packmol_jll v21.1.0+0
  [36c8627f] + Pango_jll v1.56.3+0
⌅ [30392449] + Pixman_jll v0.44.2+0
  [a2964d1f] + Wayland_jll v1.24.0+0
  [02c8fc9c] + XML2_jll v2.14.4+0
  [ffd25f8a] + XZ_jll v5.8.1+0
  [4f6342f7] + Xorg_libX11_jll v1.8.12+0
  [0c0b7dd1] + Xorg_libXau_jll v1.0.13+0
  [3c9796d7] + Xorg_libXcomposite_jll v0.4.6+0
  [935fb764] + Xorg_libXcursor_jll v1.2.4+0
  [0aeada51] + Xorg_libXdamage_jll v1.1.6+0
  [a3789734] + Xorg_libXdmcp_jll v1.1.6+0
  [1082639a] + Xorg_libXext_jll v1.3.7+0
  [d091e8ba] + Xorg_libXfixes_jll v6.0.1+0
  [a51aa0fd] + Xorg_libXi_jll v1.8.3+0
  [d1454406] + Xorg_libXinerama_jll v1.1.6+0
  [ec84b674] + Xorg_libXrandr_jll v1.5.5+0
  [ea2f1a96] + Xorg_libXrender_jll v0.9.12+0
  [b6f176f1] + Xorg_libXtst_jll v1.2.5+0
  [c7cfdc94] + Xorg_libxcb_jll v1.17.1+0
  [cc61e674] + Xorg_libxkbfile_jll v1.1.3+0
  [35661453] + Xorg_xkbcomp_jll v1.4.7+0
  [33bec58e] + Xorg_xkeyboard_config_jll v2.44.0+0
  [c5fb5394] + Xorg_xtrans_jll v1.6.0+0
  [de012916] + at_spi2_atk_jll v2.38.0+0
  [0fc3237b] + at_spi2_core_jll v2.57.1+0
  [da03df04] + gdk_pixbuf_jll v2.42.13+0
  [bf975903] + iso_codes_jll v4.17.0+0
  [b53b4c65] + libpng_jll v1.6.50+0
  [d8fb68d0] + xkbcommon_jll v1.9.2+0
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8ba89e20] + Distributed v1.11.0
  [f43a241f] + Downloads v1.7.0
  [7b1f6079] + FileWatching v1.11.0
  [9fa8497b] + Future v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.13.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [44cfe95a] + Pkg v1.13.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [f489334b] + StyledStrings v1.11.0
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] + LibCURL_jll v8.15.0+1
  [e37daf67] + LibGit2_jll v1.9.1+0
  [29816b5a] + LibSSH2_jll v1.11.3+1
  [14a3606d] + MozillaCACerts_jll v2025.8.12
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [458c3c95] + OpenSSL_jll v3.5.2+0
  [efcefdf7] + PCRE2_jll v10.46.0+0
  [83775a58] + Zlib_jll v1.3.1+2
  [3161d3a3] + Zstd_jll v1.5.7+1
  [8e850b90] + libblastrampoline_jll v5.13.1+0
  [8e850ede] + nghttp2_jll v1.67.0+0
  [3f19e933] + p7zip_jll v17.6.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 5.07s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 75.74s


################################################################################
# Testing
#

     Testing Packmol
      Status `/tmp/jl_opdItu/Project.toml`
  [4c88cf16] Aqua v0.8.14
  [69e1c6dd] CellListMap v0.9.11
  [26cc04aa] FiniteDifferences v0.12.32
⌅ [f6369f11] ForwardDiff v0.10.38
  [e1fe445b] NativeFileDialog v0.2.1
  [6cdf86f9] Packmol v0.1.12
  [d96e819e] Parameters v0.12.3
  [bf97046b] SPGBox v0.7.2
  [90137ffa] StaticArrays v1.9.15
  [10745b16] Statistics v1.11.1
  [f8b46487] TestItemRunner v1.1.0
  [1c621080] TestItems v1.0.0
  [eb89d173] Packmol_jll v21.1.0+0
  [37e2e46d] LinearAlgebra v1.13.0
  [9a3f8284] Random v1.11.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_opdItu/Manifest.toml`
  [4c88cf16] Aqua v0.8.14
  [69e1c6dd] CellListMap v0.9.11
  [d360d2e6] ChainRulesCore v1.26.0
  [ae650224] ChunkSplitters v3.1.2
  [bbf7d656] CommonSubexpressions v0.3.1
  [34da2185] Compat v4.18.0
  [187b0558] ConstructionBase v1.6.0
  [163ba53b] DiffResults v1.1.0
  [b552c78f] DiffRules v1.15.1
  [ffbed154] DocStringExtensions v0.9.5
  [48062228] FilePathsBase v0.9.24
  [26cc04aa] FiniteDifferences v0.12.32
⌅ [f6369f11] ForwardDiff v0.10.38
  [92d709cd] IrrationalConstants v0.2.4
  [692b3bcd] JLLWrappers v1.7.1
  [2ab3a3ac] LogExpFunctions v0.3.29
  [1914dd2f] MacroTools v0.5.16
  [77ba4419] NaNMath v1.1.3
  [e1fe445b] NativeFileDialog v0.2.1
  [bac558e1] OrderedCollections v1.8.1
  [6cdf86f9] Packmol v0.1.12
  [d96e819e] Parameters v0.12.3
  [aea7be01] PrecompileTools v1.3.3
  [21216c6a] Preferences v1.5.0
  [92933f4c] ProgressMeter v1.11.0
  [708f8203] Richardson v1.4.2
  [bf97046b] SPGBox v0.7.2
  [efcf1570] Setfield v1.1.2
  [276daf66] SpecialFunctions v2.5.1
  [90137ffa] StaticArrays v1.9.15
  [1e83bf80] StaticArraysCore v1.4.3
  [10745b16] Statistics v1.11.1
  [f8b46487] TestItemRunner v1.1.0
  [1c621080] TestItems v1.0.0
  [3a884ed6] UnPack v1.0.2
  [7b86fcea] ATK_jll v2.38.1+0
  [6e34b625] Bzip2_jll v1.0.9+0
  [83423d85] Cairo_jll v1.18.5+0
  [ee1fde0b] Dbus_jll v1.16.2+0
  [2702e6a9] EpollShim_jll v0.0.20230411+1
  [2e619515] Expat_jll v2.7.1+0
  [a3f928ae] Fontconfig_jll v2.17.1+0
  [d7e528f0] FreeType2_jll v2.13.4+0
  [559328eb] FriBidi_jll v1.0.17+0
  [77ec8976] GTK3_jll v3.24.31+0
  [b0724c58] GettextRuntime_jll v0.22.4+0
  [7746bdde] Glib_jll v2.84.3+0
  [3b182d85] Graphite2_jll v1.3.15+0
  [2e76f6c2] HarfBuzz_jll v8.5.1+0
  [aacddb02] JpegTurbo_jll v3.1.2+0
  [88015f11] LERC_jll v4.0.1+0
  [1d63c593] LLVMOpenMP_jll v18.1.8+0
  [dd4b983a] LZO_jll v2.10.3+0
  [42c93a91] Libepoxy_jll v1.5.11+0
  [e9f186c6] Libffi_jll v3.4.7+0
  [7e76a0d4] Libglvnd_jll v1.7.1+1
  [94ce4f54] Libiconv_jll v1.18.0+0
  [4b2f31a3] Libmount_jll v2.41.1+0
  [89763e89] Libtiff_jll v4.7.1+0
  [38a345b3] Libuuid_jll v2.41.1+0
  [94d9ae2c] NativeFileDialog_jll v1.1.6+3
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
  [eb89d173] Packmol_jll v21.1.0+0
  [36c8627f] Pango_jll v1.56.3+0
⌅ [30392449] Pixman_jll v0.44.2+0
  [a2964d1f] Wayland_jll v1.24.0+0
  [02c8fc9c] XML2_jll v2.14.4+0
  [ffd25f8a] XZ_jll v5.8.1+0
  [4f6342f7] Xorg_libX11_jll v1.8.12+0
  [0c0b7dd1] Xorg_libXau_jll v1.0.13+0
  [3c9796d7] Xorg_libXcomposite_jll v0.4.6+0
  [935fb764] Xorg_libXcursor_jll v1.2.4+0
  [0aeada51] Xorg_libXdamage_jll v1.1.6+0
  [a3789734] Xorg_libXdmcp_jll v1.1.6+0
  [1082639a] Xorg_libXext_jll v1.3.7+0
  [d091e8ba] Xorg_libXfixes_jll v6.0.1+0
  [a51aa0fd] Xorg_libXi_jll v1.8.3+0
  [d1454406] Xorg_libXinerama_jll v1.1.6+0
  [ec84b674] Xorg_libXrandr_jll v1.5.5+0
  [ea2f1a96] Xorg_libXrender_jll v0.9.12+0
  [b6f176f1] Xorg_libXtst_jll v1.2.5+0
  [c7cfdc94] Xorg_libxcb_jll v1.17.1+0
  [cc61e674] Xorg_libxkbfile_jll v1.1.3+0
  [35661453] Xorg_xkbcomp_jll v1.4.7+0
  [33bec58e] Xorg_xkeyboard_config_jll v2.44.0+0
  [c5fb5394] Xorg_xtrans_jll v1.6.0+0
  [de012916] at_spi2_atk_jll v2.38.0+0
  [0fc3237b] at_spi2_core_jll v2.57.1+0
  [da03df04] gdk_pixbuf_jll v2.42.13+0
  [bf975903] iso_codes_jll v4.17.0+0
  [b53b4c65] libpng_jll v1.6.50+0
  [d8fb68d0] xkbcommon_jll v1.9.2+0
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [8ba89e20] Distributed v1.11.0
  [f43a241f] Downloads v1.7.0
  [7b1f6079] FileWatching v1.11.0
  [9fa8497b] Future v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.13.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [ca575930] NetworkOptions v1.3.0
  [44cfe95a] Pkg v1.13.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [6462fe0b] Sockets v1.11.0
  [2f01184e] SparseArrays v1.13.0
  [f489334b] StyledStrings v1.11.0
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] LibCURL_jll v8.15.0+1
  [e37daf67] LibGit2_jll v1.9.1+0
  [29816b5a] LibSSH2_jll v1.11.3+1
  [14a3606d] MozillaCACerts_jll v2025.8.12
  [4536629a] OpenBLAS_jll v0.3.29+0
  [05823500] OpenLibm_jll v0.8.7+0
  [458c3c95] OpenSSL_jll v3.5.2+0
  [efcefdf7] PCRE2_jll v10.46.0+0
  [bea87d4a] SuiteSparse_jll v7.10.1+0
  [83775a58] Zlib_jll v1.3.1+2
  [3161d3a3] Zstd_jll v1.5.7+1
  [8e850b90] libblastrampoline_jll v5.13.1+0
  [8e850ede] nghttp2_jll v1.67.0+0
  [3f19e933] p7zip_jll v17.6.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
ERROR: LoadError: UndefVarError: `push_testset` not defined in `Test`
Suggestion: check for spelling errors or missing imports.
Stacktrace:
 [1] getproperty
   @ ./Base_compiler.jl:50 [inlined]
 [2] run_tests(path::String; filter::Nothing, verbose::Bool)
   @ TestItemRunner ~/.julia/packages/TestItemRunner/Q6zqe/src/TestItemRunner.jl:197
 [3] run_tests(path::String)
   @ TestItemRunner ~/.julia/packages/TestItemRunner/Q6zqe/src/TestItemRunner.jl:133
 [4] top-level scope
   @ ~/.julia/packages/Packmol/b5E9B/test/runtests.jl:2
 [5] include(mapexpr::Function, mod::Module, _path::String)
   @ Base ./Base.jl:309
 [6] top-level scope
   @ none:6
 [7] eval(m::Module, e::Any)
   @ Core ./boot.jl:489
 [8] exec_options(opts::Base.JLOptions)
   @ Base ./client.jl:296
 [9] _start()
   @ Base ./client.jl:563
in expression starting at /home/pkgeval/.julia/packages/Packmol/b5E9B/test/runtests.jl:2

Testing failed after 61.09s

ERROR: LoadError: Package Packmol errored during testing
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2673
  [3] test
    @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2522 [inlined]
  [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:538
  [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:515
  [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:168
  [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:157
  [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156
  [9] test
    @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [inlined]
 [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String)
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:155
 [11] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:219
 [12] include(mod::Module, _path::String)
    @ Base ./Base.jl:308
 [13] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:330
 [14] _start()
    @ Base ./client.jl:563
in expression starting at /PkgEval.jl/scripts/evaluate.jl:210

PkgEval failed after 168.13s: package tests unexpectedly errored