Package evaluation of LightGraphsExtras on Julia 1.13.0-DEV.1080 (ed57414aec*) started at 2025-09-04T21:53:09.122 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 10.09s ################################################################################ # Installation # Installing LightGraphsExtras... Resolving package versions... Installed Homebrew ─ v0.7.1 Installed GLPK ───── v0.7.0 Updating `~/.julia/environments/v1.13/Project.toml` [89bd72ed] + LightGraphsExtras v0.3.0 Updating `~/.julia/environments/v1.13/Manifest.toml` ⌅ [ec485272] + ArnoldiMethod v0.1.0 ⌅ [9e28174c] + BinDeps v0.8.10 [49dc2e85] + Calculus v0.5.2 [bbf7d656] + CommonSubexpressions v0.3.1 ⌅ [34da2185] + Compat v2.2.1 ⌅ [864edb3b] + DataStructures v0.17.20 [8bb1440f] + DelimitedFiles v1.9.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [ffbed154] + DocStringExtensions v0.9.5 ⌅ [f6369f11] + ForwardDiff v0.10.38 ⌅ [60bf3e95] + GLPK v0.7.0 [3c7084bd] + GLPKMathProgInterface v0.5.0 ⌅ [92fee26a] + GZip v0.5.2 [d9be37ee] + Homebrew v0.7.1 [d25df0c9] + Inflate v0.1.5 [92d709cd] + IrrationalConstants v0.2.4 [692b3bcd] + JLLWrappers v1.7.1 [682c06a0] + JSON v0.21.4 ⌅ [4076af6c] + JuMP v0.18.6 [093fc24a] + LightGraphs v1.3.5 [89bd72ed] + LightGraphsExtras v0.3.0 ⌃ [2f5eb75a] + LightGraphsFlows v0.3.1 ⌅ [f8899e07] + LinQuadOptInterface v0.3.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 ⌅ [b8f27783] + MathOptInterface v0.5.1 [fdba3010] + MathProgBase v0.7.8 ⌅ [b51810bb] + MatrixDepot v0.7.0 ⌅ [77ba4419] + NaNMath v0.3.7 [bac558e1] + OrderedCollections v1.8.1 [69de0a69] + Parsers v2.8.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [89212889] + ReverseDiffSparse v0.8.6 [699a6c99] + SimpleTraits v0.9.5 [276daf66] + SpecialFunctions v2.5.1 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [30578b45] + URIParser v0.4.1 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+1 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.8.12 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.2+0 [efcefdf7] + PCRE2_jll v10.46.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.13.1+0 [8e850ede] + nghttp2_jll v1.67.0+0 [3f19e933] + p7zip_jll v17.6.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Building Homebrew → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/f01fb2f34675f9839d55ba7238bab63ebd2e531e/build.log` Building GLPK ────→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/ec92e88edf48471e7e0983b22e0b4a13e24900c7/build.log` Installation failed after 24.94s ERROR: LoadError: Error building `GLPK`: % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 4 4019k 4 190k 0 0 339k 0 0:00:11 --:--:-- 0:00:11 339k 7 4019k 7 296k 0 0 190k 0 0:00:21 0:00:01 0:00:20 190k 10 4019k 10 410k 0 0 159k 0 0:00:25 0:00:02 0:00:23 159k 12 4019k 12 499k 0 0 127k 0 0:00:31 0:00:03 0:00:28 127k 14 4019k 14 601k 0 0 131k 0 0:00:30 0:00:04 0:00:26 131k 18 4019k 18 726k 0 0 130k 0 0:00:30 0:00:05 0:00:25 106k 21 4019k 21 849k 0 0 126k 0 0:00:31 0:00:06 0:00:25 107k 24 4019k 24 966k 0 0 127k 0 0:00:31 0:00:07 0:00:24 110k 26 4019k 26 1047k 0 0 122k 0 0:00:32 0:00:08 0:00:24 117k 28 4019k 28 1161k 0 0 121k 0 0:00:33 0:00:09 0:00:24 111k 31 4019k 31 1246k 0 0 117k 0 0:00:34 0:00:10 0:00:24 103k 32 4019k 32 1290k 0 0 111k 0 0:00:36 0:00:11 0:00:25 92672 32 4019k 32 1300k 0 0 103k 0 0:00:38 0:00:12 0:00:26 68565 33 4019k 33 1339k 0 0 98k 0 0:00:40 0:00:13 0:00:27 59107 34 4019k 34 1380k 0 0 97181 0 0:00:42 0:00:14 0:00:28 45204 36 4019k 36 1474k 0 0 96916 0 0:00:42 0:00:15 0:00:27 46822 37 4019k 37 1491k 0 0 92161 0 0:00:44 0:00:16 0:00:28 41180 37 4019k 37 1508k 0 0 87773 0 0:00:46 0:00:17 0:00:29 42418 41 4019k 41 1652k 0 0 91206 0 0:00:45 0:00:18 0:00:27 64897 42 4019k 42 1689k 0 0 88357 0 0:00:46 0:00:19 0:00:27 62818 44 4019k 44 1793k 0 0 89222 0 0:00:46 0:00:20 0:00:26 65305 46 4019k 46 1868k 0 0 86640 0 0:00:47 0:00:22 0:00:25 70064 46 4019k 46 1887k 0 0 85283 0 0:00:48 0:00:22 0:00:26 76631 48 4019k 48 1940k 0 0 83982 0 0:00:49 0:00:23 0:00:26 57772 48 4019k 48 1969k 0 0 81554 0 0:00:50 0:00:24 0:00:26 55692 50 4019k 50 2029k 0 0 80394 0 0:00:51 0:00:25 0:00:26 45902 52 4019k 52 2095k 0 0 80760 0 0:00:50 0:00:26 0:00:24 51748 54 4019k 54 2178k 0 0 79457 0 0:00:51 0:00:28 0:00:23 55085 55 4019k 55 2218k 0 0 79318 0 0:00:51 0:00:28 0:00:23 57104 56 4019k 56 2273k 0 0 78475 0 0:00:52 0:00:29 0:00:23 63045 60 4019k 60 2431k 0 0 81457 0 0:00:50 0:00:30 0:00:20 87291 61 4019k 61 2468k 0 0 80063 0 0:00:51 0:00:31 0:00:20 76378 63 4019k 63 2553k 0 0 80281 0 0:00:51 0:00:32 0:00:19 85422 64 4019k 64 2602k 0 0 79223 0 0:00:51 0:00:33 0:00:18 78692 65 4019k 65 2643k 0 0 76752 0 0:00:53 0:00:35 0:00:18 67649 66 4019k 66 2686k 0 0 77323 0 0:00:53 0:00:35 0:00:18 52075 70 4019k 70 2828k 0 0 79238 0 0:00:51 0:00:36 0:00:15 74010 72 4019k 72 2903k 0 0 77879 0 0:00:52 0:00:38 0:00:14 63954 72 4019k 72 2916k 0 0 77456 0 0:00:53 0:00:38 0:00:15 65363 74 4019k 74 2998k 0 0 76927 0 0:00:53 0:00:39 0:00:14 78244 77 4019k 77 3096k 0 0 77458 0 0:00:53 0:00:40 0:00:13 78357 78 4019k 78 3141k 0 0 77378 0 0:00:53 0:00:41 0:00:12 63822 79 4019k 79 3199k 0 0 76998 0 0:00:53 0:00:42 0:00:11 69283 82 4019k 82 3298k 0 0 77395 0 0:00:53 0:00:43 0:00:10 76930 83 4019k 83 3340k 0 0 75854 0 0:00:54 0:00:45 0:00:09 67608 83 4019k 83 3349k 0 0 75256 0 0:00:54 0:00:45 0:00:09 55836 86 4019k 86 3459k 0 0 76049 0 0:00:54 0:00:46 0:00:08 65029 87 4019k 87 3517k 0 0 75700 0 0:00:54 0:00:47 0:00:07 64732 89 4019k 89 3578k 0 0 75475 0 0:00:54 0:00:48 0:00:06 58403 90 4019k 90 3633k 0 0 75073 0 0:00:54 0:00:49 0:00:05 67160 91 4019k 91 3688k 0 0 74551 0 0:00:55 0:00:50 0:00:05 68248 92 4019k 92 3735k 0 0 74182 0 0:00:55 0:00:51 0:00:04 56698 94 4019k 94 3794k 0 0 73611 0 0:00:55 0:00:52 0:00:03 54526 94 4019k 94 3813k 0 0 72854 0 0:00:56 0:00:53 0:00:03 47644 97 4019k 97 3926k 0 0 73695 0 0:00:55 0:00:54 0:00:01 60019 100 4019k 100 4019k 0 0 74435 0 0:00:55 0:00:55 --:--:-- 73179 checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking for style of include used by make... GNU checking dependency style of gcc... gcc3 checking build system type... x86_64-unknown-linux-gnu checking host system type... x86_64-unknown-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format... func_convert_file_noop checking how to convert x86_64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for exp in -lm... yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for gettimeofday... yes checking gmp.h usability... no checking gmp.h presence... no checking for gmp.h... no configure: error: gmp.h header not found [ Info: Attempting to create directory /home/pkgeval/.julia/packages/GLPK/vPY13/deps/downloads [ Info: Downloading file http://ftp.gnu.org/gnu/glpk/glpk-4.61.tar.gz [ Info: Done downloading file http://ftp.gnu.org/gnu/glpk/glpk-4.61.tar.gz [ Info: Attempting to create directory /home/pkgeval/.julia/packages/GLPK/vPY13/deps/src [ Info: Attempting to create directory /home/pkgeval/.julia/packages/GLPK/vPY13/deps [ Info: Directory /home/pkgeval/.julia/packages/GLPK/vPY13/deps already exists [ Info: Attempting to create directory /home/pkgeval/.julia/packages/GLPK/vPY13/deps/builds/libglpk [ Info: Changing directory to /home/pkgeval/.julia/packages/GLPK/vPY13/deps/builds/libglpk ERROR: LoadError: failed process: Process(setenv(`/home/pkgeval/.julia/packages/GLPK/vPY13/deps/src/glpk-4.61/configure --with-gmp --prefix=/home/pkgeval/.julia/packages/GLPK/vPY13/deps/usr`,["JULIA_NUM_PRECOMPILE_TASKS=1", "JULIA_DEPOT_PATH=/home/pkgeval/.julia:/usr/local/share/julia:", "JULIA_PKG_PRECOMPILE_AUTO=0", "CI=true", "OPENBLAS_NUM_THREADS=1", "JULIA_PKGEVAL=true", "HOME=/home/pkgeval", "CPPFLAGS= -I/home/pkgeval/.julia/packages/GLPK/vPY13/deps/usr/include -I/opt/julia//include", "JULIA_NUM_THREADS=1", "OPENBLAS_MAIN_FREE=1", "PKG_CONFIG_PATH=/home/pkgeval/.julia/packages/GLPK/vPY13/deps/usr/lib/pkgconfig", "PATH=/home/pkgeval/.julia/packages/GLPK/vPY13/deps/usr/bin:/usr/local/bin:/usr/local/sbin:/usr/bin:/usr/sbin:/bin:/sbin", "JULIA_CPU_THREADS=1", "DISPLAY=:1", "LDFLAGS= -L/home/pkgeval/.julia/packages/GLPK/vPY13/deps/usr/lib -L/opt/julia//lib -Wl,-rpath -Wl,/home/pkgeval/.julia/packages/GLPK/vPY13/deps/usr/lib", "PKGEVAL=true", "JULIA_LOAD_PATH=@:/tmp/jl_FeWmNp", "PYTHON=", "LANG=C.UTF-8", "R_HOME=*"]), ProcessExited(1)) [1] Stacktrace: [1] pipeline_error @ ./process.jl:602 [inlined] [2] run(::Cmd; wait::Bool) @ Base ./process.jl:517 [3] run(::Cmd) @ Base ./process.jl:514 [4] run(s::BinDeps.SynchronousStepCollection) @ BinDeps ~/.julia/packages/BinDeps/ZEval/src/BinDeps.jl:521 [5] run(s::FileRule) @ BinDeps ~/.julia/packages/BinDeps/ZEval/src/BinDeps.jl:483 ┌ [6] run(s::BinDeps.SynchronousStepCollection) │ @ BinDeps ~/.julia/packages/BinDeps/ZEval/src/BinDeps.jl:521 ╰──── repeated 2 times [8] satisfy!(dep::BinDeps.LibraryDependency, methods::Vector{DataType}) @ BinDeps ~/.julia/packages/BinDeps/ZEval/src/dependencies.jl:944 [9] satisfy!(dep::BinDeps.LibraryDependency) @ BinDeps ~/.julia/packages/BinDeps/ZEval/src/dependencies.jl:922 [10] top-level scope @ ~/.julia/packages/GLPK/vPY13/deps/build.jl:975 [11] macro expansion @ ~/.julia/packages/BinDeps/ZEval/src/dependencies.jl:977 [inlined] [12] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:309 [13] top-level scope @ none:5 [14] eval(m::Module, e::Any) @ Core ./boot.jl:489 [15] exec_options(opts::Base.JLOptions) @ Base ./client.jl:296 [16] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/GLPK/vPY13/deps/build.jl:51 Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68 [2] (::Pkg.Operations.var"#145#146"{Bool, Pkg.Types.Context, String, PackageSpec, String})() @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:1591 [3] withenv(::Pkg.Operations.var"#145#146"{Bool, Pkg.Types.Context, String, PackageSpec, String}, ::Pair{String, String}, ::Vararg{Pair{String}}) @ Base ./env.jl:265 [4] (::Pkg.Operations.var"#208#209"{String, Pkg.Types.EnvCache, Bool, Bool, Bool, Pkg.Operations.var"#145#146"{Bool, Pkg.Types.Context, String, PackageSpec, String}, Pkg.Types.Context, PackageSpec})() @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2446 [5] with_temp_env(fn::Pkg.Operations.var"#208#209"{String, Pkg.Types.EnvCache, Bool, Bool, Bool, Pkg.Operations.var"#145#146"{Bool, Pkg.Types.Context, String, PackageSpec, String}, Pkg.Types.Context, PackageSpec}, temp_env::String) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2292 [6] (::Pkg.Operations.var"#204#205"{Dict{String, Any}, Bool, Bool, Bool, Pkg.Operations.var"#145#146"{Bool, Pkg.Types.Context, String, PackageSpec, String}, Pkg.Types.Context, PackageSpec, String, String})(tmp::String) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2405 [7] mktempdir(fn::Pkg.Operations.var"#204#205"{Dict{String, Any}, Bool, Bool, Bool, Pkg.Operations.var"#145#146"{Bool, Pkg.Types.Context, String, PackageSpec, String}, Pkg.Types.Context, PackageSpec, String, String}, parent::String; prefix::String) @ Base.Filesystem ./file.jl:899 [8] mktempdir(fn::Function, parent::String) @ Base.Filesystem ./file.jl:895 [9] #sandbox#200 @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2352 [inlined] [10] kwcall(::@NamedTuple{preferences::Dict{String, Any}, allow_reresolve::Bool}, ::typeof(Pkg.Operations.sandbox), fn::Function, ctx::Pkg.Types.Context, target::PackageSpec, sandbox_path::String, sandbox_project_override::Pkg.Types.Project) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2342 [11] build_versions(ctx::Pkg.Types.Context, uuids::Set{UUID}; verbose::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:1568 [12] build_versions @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:1480 [inlined] [13] add(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}, new_git::Set{UUID}; allow_autoprecomp::Bool, preserve::PreserveLevel, platform::Base.BinaryPlatforms.Platform, target::Symbol) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:1924 [14] add @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:1869 [inlined] [15] add(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; preserve::PreserveLevel, platform::Base.BinaryPlatforms.Platform, target::Symbol, allow_autoprecomp::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:354 [16] add(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:168 [17] add(pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:157 [18] add(pkg::PackageSpec) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:155 [19] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:112 [20] include(mod::Module, _path::String) @ Base ./Base.jl:308 [21] exec_options(opts::Base.JLOptions) @ Base ./client.jl:330 [22] _start() @ Base ./client.jl:563 in expression starting at /PkgEval.jl/scripts/evaluate.jl:109 PkgEval skipped after 105.35s: package could not be installed