Package evaluation of Rfam on Julia 1.13.0-DEV.1072 (de815ed1fa*) started at 2025-09-03T12:13:48.952


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# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 9.05s


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# Installation
#

Installing Rfam...
   Resolving package versions...
    Updating `~/.julia/environments/v1.13/Project.toml`
  [38c5b72b] + Rfam v3.2.0
    Updating `~/.julia/environments/v1.13/Manifest.toml`
  [692b3bcd] + JLLWrappers v1.7.1
  [21216c6a] + Preferences v1.5.0
  [38c5b72b] + Rfam v3.2.0
  [be1be57a] + Gzip_jll v1.14.0+0
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [ade2ca70] + Dates v1.11.0
  [f43a241f] + Downloads v1.7.0
  [7b1f6079] + FileWatching v1.11.0
  [b27032c2] + LibCURL v0.6.4
  [8f399da3] + Libdl v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [de0858da] + Printf v1.11.0
  [ea8e919c] + SHA v0.7.0
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] + LibCURL_jll v8.15.0+1
  [29816b5a] + LibSSH2_jll v1.11.3+1
  [14a3606d] + MozillaCACerts_jll v2025.8.12
  [458c3c95] + OpenSSL_jll v3.5.2+0
  [83775a58] + Zlib_jll v1.3.1+2
  [3161d3a3] + Zstd_jll v1.5.7+1
  [8e850ede] + nghttp2_jll v1.66.0+0

Installation completed after 4.43s


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# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 21.01s


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# Testing
#

     Testing Rfam
      Status `/tmp/jl_B85afo/Project.toml`
  [4c88cf16] Aqua v0.8.14
  [38c5b72b] Rfam v3.2.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_B85afo/Manifest.toml`
  [4c88cf16] Aqua v0.8.14
  [34da2185] Compat v4.18.0
  [692b3bcd] JLLWrappers v1.7.1
  [21216c6a] Preferences v1.5.0
  [38c5b72b] Rfam v3.2.0
  [be1be57a] Gzip_jll v1.14.0+0
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [f43a241f] Downloads v1.7.0
  [7b1f6079] FileWatching v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [ca575930] NetworkOptions v1.3.0
  [44cfe95a] Pkg v1.13.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [f489334b] StyledStrings v1.11.0
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] LibCURL_jll v8.15.0+1
  [e37daf67] LibGit2_jll v1.9.1+0
  [29816b5a] LibSSH2_jll v1.11.3+1
  [14a3606d] MozillaCACerts_jll v2025.8.12
  [458c3c95] OpenSSL_jll v3.5.2+0
  [efcefdf7] PCRE2_jll v10.46.0+0
  [83775a58] Zlib_jll v1.3.1+2
  [3161d3a3] Zstd_jll v1.5.7+1
  [8e850ede] nghttp2_jll v1.66.0+0
  [3f19e933] p7zip_jll v17.6.0+0
     Testing Running tests...
[ Info: RFAM Directory /tmp/jl_qWNUc2 set.
[ Info: Rfam version 14.7 set.
Test Summary:                                | Pass  Total   Time
aqua                                         |   11     11  49.8s
  Method ambiguity                           |    1      1   6.8s
  Unbound type parameters                    |    1      1   0.1s
  Undefined exports                          |    1      1   0.0s
  Compare Project.toml and test/Project.toml |    1      1   0.4s
  Stale dependencies                         |    1      1   3.7s
  Compat bounds                              |    4      4   0.8s
  Piracy                                     |    1      1   0.2s
  Persistent tasks                           |    1      1  23.8s
[ Info: Downloading RF00162 to /tmp/jl_qWNUc2/14.7/fasta_files/RF00162.fa ...
[ Info: Downloading Rfam.cm to /tmp/jl_qWNUc2/14.7/Rfam.cm ...
[ Info: Downloading Rfam.seed to /tmp/jl_qWNUc2/14.7/Rfam.seed ...
[ Info: Downloading Rfam.seed_tree.tar.gz to /tmp/jl_qWNUc2/14.7/Rfam.seed_tree ...
     Testing Rfam tests passed 

Testing completed after 69.13s

PkgEval succeeded after 117.16s