Package evaluation of MEDYANSimRunner on Julia 1.13.0-DEV.1072 (de815ed1fa*) started at 2025-09-03T14:15:11.202 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.96s ################################################################################ # Installation # Installing MEDYANSimRunner... Resolving package versions... Installed MEDYANSimRunner ─ v0.6.0 Updating `~/.julia/environments/v1.13/Project.toml` [b58a3b99] + MEDYANSimRunner v0.6.0 Updating `~/.julia/environments/v1.13/Manifest.toml` [1520ce14] + AbstractTrees v0.4.5 [dce04be8] + ArgCheck v2.5.0 [0b6fb165] + ChunkCodecCore v1.0.0 [c6a955be] + ChunkCodecLibBlosc v0.3.1 [4c0bbee4] + ChunkCodecLibZlib v1.0.0 [6309b1aa] + CodecInflate64 v0.1.3 [944b1d66] + CodecZlib v0.7.8 [187b0558] + ConstructionBase v1.6.0 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.1 [e2d170a0] + DataValueInterfaces v1.0.0 [ab62b9b5] + DeepDiffs v1.2.0 [0c81fc1b] + InputBuffers v1.1.1 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [0f8b85d8] + JSON3 v1.14.3 [e6f89c97] + LoggingExtras v1.1.0 [b58a3b99] + MEDYANSimRunner v0.6.0 [bac558e1] + OrderedCollections v1.8.1 [69de0a69] + Parsers v2.8.3 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [d423b6e5] + SmallZarrGroups v0.8.12 [09ab397b] + StructArrays v0.7.1 [856f2bd8] + StructTypes v1.11.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [3bb67fe8] + TranscodingStreams v0.11.3 [49080126] + ZipArchives v2.5.1 [0b7ba130] + Blosc_jll v1.21.7+0 [5ced341a] + Lz4_jll v1.10.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 Installation completed after 5.17s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... ERROR: LoadError: The following 1 direct dependency failed to precompile: MEDYANSimRunner Error: Missing source file for Base.PkgId(UUID("b58a3b99-22e3-44d1-b5ea-258f082a6fe8"), "MEDYANSimRunner" in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 20.75s ################################################################################ # Testing # Testing MEDYANSimRunner Status `/tmp/jl_89KcyT/Project.toml` [e6f89c97] LoggingExtras v1.1.0 [b58a3b99] MEDYANSimRunner v0.6.0 `~/.julia/packages/MEDYANSimRunner/ILcsV` [bac558e1] OrderedCollections v1.8.1 [d423b6e5] SmallZarrGroups v0.8.12 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [56ddb016] Logging v1.11.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_89KcyT/Manifest.toml` [1520ce14] AbstractTrees v0.4.5 [dce04be8] ArgCheck v2.5.0 [0b6fb165] ChunkCodecCore v1.0.0 [c6a955be] ChunkCodecLibBlosc v0.3.1 [4c0bbee4] ChunkCodecLibZlib v1.0.0 [6309b1aa] CodecInflate64 v0.1.3 [944b1d66] CodecZlib v0.7.8 [187b0558] ConstructionBase v1.6.0 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.19.1 [e2d170a0] DataValueInterfaces v1.0.0 [ab62b9b5] DeepDiffs v1.2.0 [0c81fc1b] InputBuffers v1.1.1 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.1 [0f8b85d8] JSON3 v1.14.3 [e6f89c97] LoggingExtras v1.1.0 [b58a3b99] MEDYANSimRunner v0.6.0 `~/.julia/packages/MEDYANSimRunner/ILcsV` [bac558e1] OrderedCollections v1.8.1 [69de0a69] Parsers v2.8.3 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 [d423b6e5] SmallZarrGroups v0.8.12 [09ab397b] StructArrays v0.7.1 [856f2bd8] StructTypes v1.11.0 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [3bb67fe8] TranscodingStreams v0.11.3 [49080126] ZipArchives v2.5.1 [0b7ba130] Blosc_jll v1.21.7+0 [5ced341a] Lz4_jll v1.10.1+0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [8f399da3] Libdl v1.11.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 Testing Running tests... Precompiling packages... 9980.0 ms ✓ MEDYANSimRunner 1 dependency successfully precompiled in 10 seconds. 44 already precompiled. Test Summary: | Pass Total Time arg parsing | 10 10 0.9s Test Summary: | Pass Total Time write_traj_file unit tests | 17 17 2.2s full run example: Test Failed at /home/pkgeval/.julia/packages/MEDYANSimRunner/ILcsV/test/test_ref_out.jl:43 Expression: read(joinpath(example_output, "start", "a", "traj", "footer.json")) == read(joinpath(#= /home/pkgeval/.julia/packages/MEDYANSimRunner/ILcsV/test/test_ref_out.jl:43 =# @__DIR__(), "example/output-ref-1_11", "a", "traj", "footer.json")) Evaluated: UInt8[0x7b, 0x0a, 0x20, 0x20, 0x20, 0x20, 0x22, 0x73, 0x74, 0x65 … 0x64, 0x37, 0x30, 0x38, 0x38, 0x64, 0x32, 0x22, 0x0a, 0x7d] == UInt8[0x7b, 0x0a, 0x20, 0x20, 0x20, 0x20, 0x22, 0x73, 0x74, 0x65 … 0x63, 0x33, 0x30, 0x39, 0x65, 0x37, 0x30, 0x22, 0x0a, 0x7d] Stacktrace: [1] top-level scope @ ~/.julia/packages/MEDYANSimRunner/ILcsV/test/test_ref_out.jl:15 [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1945 [inlined] [3] macro expansion @ ~/.julia/packages/MEDYANSimRunner/ILcsV/test/test_ref_out.jl:21 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1945 [inlined] [5] macro expansion @ ~/.julia/packages/MEDYANSimRunner/ILcsV/test/test_ref_out.jl:43 [inlined] [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:744 [inlined] Test Summary: | Pass Fail Total Time run example | 1 1 2 4m10.5s full run example | 1 1 2 1m49.3s partial restart example 1 | 0 29.3s partial restart example 2 | 0 22.0s partial restart example 3 | 0 8.7s partial restart example 4 | 0 5.7s partial restart example 5 | 0 5.4s partial restart example 6 | 0 4.9s partial restart example 7 | 0 6.9s partial restart example 8 | 0 14.7s partial restart example 9 | 0 19.7s partial restart example 10 | 0 15.2s partial restart example 11 | 0 8.7s RNG of the outermost testset: Random.Xoshiro(0x462b00e2c36d8d2b, 0x1d6b618481288778, 0x1b6f61d4c68bd39c, 0x6bfc4e7f8d369d3f, 0x1b80341504209258) ERROR: LoadError: Some tests did not pass: 1 passed, 1 failed, 0 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/MEDYANSimRunner/ILcsV/test/test_ref_out.jl:13 in expression starting at /home/pkgeval/.julia/packages/MEDYANSimRunner/ILcsV/test/runtests.jl:3 Testing failed after 166.26s ERROR: LoadError: Package MEDYANSimRunner errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2673 [3] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2522 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:538 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:515 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:168 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:157 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [9] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:155 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [12] include(mod::Module, _path::String) @ Base ./Base.jl:308 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:330 [14] _start() @ Base ./client.jl:563 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 333.92s: package has test failures