Package evaluation of GraphIO on Julia 1.13.0-DEV.1072 (de815ed1fa*) started at 2025-09-03T12:14:29.103 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.27s ################################################################################ # Installation # Installing GraphIO... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [aa1b3936] + GraphIO v0.7.1 Updating `~/.julia/environments/v1.13/Manifest.toml` [ec485272] + ArnoldiMethod v0.4.0 [864edb3b] + DataStructures v0.19.1 [8bb1440f] + DelimitedFiles v1.9.1 [aa1b3936] + GraphIO v0.7.1 [86223c79] + Graphs v1.13.1 [d25df0c9] + Inflate v0.1.5 [1914dd2f] + MacroTools v0.5.16 [bac558e1] + OrderedCollections v1.8.1 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [699a6c99] + SimpleTraits v0.9.5 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.13.1+0 Installation completed after 1.06s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:76 Precompiling package dependencies... Precompilation completed after 34.6s ################################################################################ # Testing # Testing GraphIO Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function. Updating `/tmp/jl_EwKHt4/Project.toml` [4c88cf16] + Aqua v0.8.14 [944b1d66] + CodecZlib v0.7.8 [8f5d6c58] + EzXML v1.2.2 [aa1b3936] + GraphIO v0.7.1 ⌅ [98e50ef6] + JuliaFormatter v1.0.62 [fae87a5f] + ParserCombinator v2.2.1 [8dfed614] ~ Test ⇒ v1.11.0 Updating `/tmp/jl_EwKHt4/Manifest.toml` [4c88cf16] + Aqua v0.8.14 [15f4f7f2] + AutoHashEquals v2.2.0 [00ebfdb7] + CSTParser v3.4.3 [944b1d66] + CodecZlib v0.7.8 ⌅ [a80b9123] + CommonMark v0.8.16 [34da2185] + Compat v4.18.0 [a8cc5b0e] + Crayons v4.1.1 ⌅ [864edb3b] ↓ DataStructures v0.19.1 ⇒ v0.18.22 [8f5d6c58] + EzXML v1.2.2 [c27321d9] + Glob v1.3.1 [aa1b3936] + GraphIO v0.7.1 [692b3bcd] + JLLWrappers v1.7.1 ⌅ [98e50ef6] + JuliaFormatter v1.0.62 [fae87a5f] + ParserCombinator v2.2.1 [0796e94c] + Tokenize v0.5.29 [3bb67fe8] + TranscodingStreams v0.11.3 [94ce4f54] + Libiconv_jll v1.18.0+0 [02c8fc9c] + XML2_jll v2.14.4+0 [0dad84c5] + ArgTools v1.1.2 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [56ddb016] + Logging v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [a4e569a6] + Tar v1.10.0 [8dfed614] ~ Test ⇒ v1.11.0 [cf7118a7] + UUIDs v1.11.0 [deac9b47] + LibCURL_jll v8.15.0+1 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.8.12 [458c3c95] + OpenSSL_jll v3.5.2+0 [efcefdf7] + PCRE2_jll v10.46.0+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850ede] + nghttp2_jll v1.66.0+0 [3f19e933] + p7zip_jll v17.6.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Test Successfully re-resolved Status `/tmp/jl_EwKHt4/Project.toml` [4c88cf16] Aqua v0.8.14 [944b1d66] CodecZlib v0.7.8 [8bb1440f] DelimitedFiles v1.9.1 [8f5d6c58] EzXML v1.2.2 [aa1b3936] GraphIO v0.7.1 [86223c79] Graphs v1.13.1 ⌅ [98e50ef6] JuliaFormatter v1.0.62 [fae87a5f] ParserCombinator v2.2.1 [699a6c99] SimpleTraits v0.9.5 [8dfed614] Test v1.11.0 Status `/tmp/jl_EwKHt4/Manifest.toml` [4c88cf16] Aqua v0.8.14 [ec485272] ArnoldiMethod v0.4.0 [15f4f7f2] AutoHashEquals v2.2.0 [00ebfdb7] CSTParser v3.4.3 [944b1d66] CodecZlib v0.7.8 ⌅ [a80b9123] CommonMark v0.8.16 [34da2185] Compat v4.18.0 [a8cc5b0e] Crayons v4.1.1 ⌅ [864edb3b] DataStructures v0.18.22 [8bb1440f] DelimitedFiles v1.9.1 [8f5d6c58] EzXML v1.2.2 [c27321d9] Glob v1.3.1 [aa1b3936] GraphIO v0.7.1 [86223c79] Graphs v1.13.1 [d25df0c9] Inflate v0.1.5 [692b3bcd] JLLWrappers v1.7.1 ⌅ [98e50ef6] JuliaFormatter v1.0.62 [1914dd2f] MacroTools v0.5.16 [bac558e1] OrderedCollections v1.8.1 [fae87a5f] ParserCombinator v2.2.1 [aea7be01] PrecompileTools v1.3.3 [21216c6a] Preferences v1.5.0 [699a6c99] SimpleTraits v0.9.5 [90137ffa] StaticArrays v1.9.15 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [0796e94c] Tokenize v0.5.29 [3bb67fe8] TranscodingStreams v0.11.3 [94ce4f54] Libiconv_jll v1.18.0+0 [02c8fc9c] XML2_jll v2.14.4+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.15.0+1 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.8.12 [4536629a] OpenBLAS_jll v0.3.29+0 [458c3c95] OpenSSL_jll v3.5.2+0 [efcefdf7] PCRE2_jll v10.46.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.66.0+0 [3f19e933] p7zip_jll v17.6.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling packages... 15797.7 ms ✓ CommonMark 40330.7 ms ✓ JuliaFormatter 2 dependencies successfully precompiled in 56 seconds. 20 already precompiled. Formatting /home/pkgeval/.julia/packages/GraphIO/yl1V9/ext/GraphIOLGCompressedExt.jl Formatting /home/pkgeval/.julia/packages/GraphIO/yl1V9/ext/GraphIOParserCombinator.jl Formatting /home/pkgeval/.julia/packages/GraphIO/yl1V9/ext/GraphIOXML.jl Formatting /home/pkgeval/.julia/packages/GraphIO/yl1V9/src/CDF/Cdf.jl Formatting /home/pkgeval/.julia/packages/GraphIO/yl1V9/src/DOT/Dot.jl Formatting /home/pkgeval/.julia/packages/GraphIO/yl1V9/src/Edgelist/Edgelist.jl Formatting /home/pkgeval/.julia/packages/GraphIO/yl1V9/src/Edgelist/IntEdgeList.jl Formatting /home/pkgeval/.julia/packages/GraphIO/yl1V9/src/GEXF/Gexf.jl Formatting /home/pkgeval/.julia/packages/GraphIO/yl1V9/src/GML/Gml.jl Formatting /home/pkgeval/.julia/packages/GraphIO/yl1V9/src/Graph6/Graph6.jl Formatting /home/pkgeval/.julia/packages/GraphIO/yl1V9/src/GraphIO.jl Formatting /home/pkgeval/.julia/packages/GraphIO/yl1V9/src/GraphML/GraphML.jl Formatting /home/pkgeval/.julia/packages/GraphIO/yl1V9/src/LGCompressed/LGCompressed.jl Formatting /home/pkgeval/.julia/packages/GraphIO/yl1V9/src/NET/Net.jl Formatting /home/pkgeval/.julia/packages/GraphIO/yl1V9/test/CDF/runtests.jl Formatting /home/pkgeval/.julia/packages/GraphIO/yl1V9/test/DOT/runtests.jl Formatting /home/pkgeval/.julia/packages/GraphIO/yl1V9/test/Edgelist/runtests.jl Formatting /home/pkgeval/.julia/packages/GraphIO/yl1V9/test/GEXF/runtests.jl Formatting /home/pkgeval/.julia/packages/GraphIO/yl1V9/test/GML/runtests.jl Formatting /home/pkgeval/.julia/packages/GraphIO/yl1V9/test/Graph6/runtests.jl Formatting /home/pkgeval/.julia/packages/GraphIO/yl1V9/test/GraphML/runtests.jl Formatting /home/pkgeval/.julia/packages/GraphIO/yl1V9/test/LGCompressed/runtests.jl Formatting /home/pkgeval/.julia/packages/GraphIO/yl1V9/test/NET/runtests.jl Formatting /home/pkgeval/.julia/packages/GraphIO/yl1V9/test/graphio.jl Formatting /home/pkgeval/.julia/packages/GraphIO/yl1V9/test/runtests.jl Well done! ✨ 🍰 ✨ DOT: Test Failed at /home/pkgeval/.julia/packages/GraphIO/yl1V9/test/graphio.jl:29 Expression: loadgraph(fname, gname, format) == g Evaluated: SimpleDiGraph{Int64}(6, [[1, 3], [3, 4], Int64[], [1, 3]], [[1, 4], Int64[], [1, 2, 4], [2]]) == SimpleDiGraph{Int64}(6, [[2, 3], [2, 3], Int64[], [1, 3]], [[4], [1, 2], [1, 2, 4], Int64[]]) Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:744 [inlined] [2] read_test(format::DOTFormat, g::SimpleDiGraph{Int64}, gname::String, fname::String; testfail::Bool) @ Main ~/.julia/packages/GraphIO/yl1V9/test/graphio.jl:29 [3] read_test(format::DOTFormat, g::SimpleDiGraph{Int64}, gname::String, fname::String) @ Main ~/.julia/packages/GraphIO/yl1V9/test/graphio.jl:22 [4] macro expansion @ ~/.julia/packages/GraphIO/yl1V9/test/DOT/runtests.jl:14 [inlined] [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1945 [inlined] [6] top-level scope @ ~/.julia/packages/GraphIO/yl1V9/test/DOT/runtests.jl:7 DOT: Test Failed at /home/pkgeval/.julia/packages/GraphIO/yl1V9/test/graphio.jl:35 Expression: (loadgraphs(fname, format))[gname] == g Evaluated: SimpleDiGraph{Int64}(6, [[1, 3], [3, 4], Int64[], [1, 3]], [[1, 4], Int64[], [1, 2, 4], [2]]) == SimpleDiGraph{Int64}(6, [[2, 3], [2, 3], Int64[], [1, 3]], [[4], [1, 2], [1, 2, 4], Int64[]]) Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:744 [inlined] [2] read_test(format::DOTFormat, g::SimpleDiGraph{Int64}, gname::String, fname::String; testfail::Bool) @ Main ~/.julia/packages/GraphIO/yl1V9/test/graphio.jl:35 [3] read_test(format::DOTFormat, g::SimpleDiGraph{Int64}, gname::String, fname::String) @ Main ~/.julia/packages/GraphIO/yl1V9/test/graphio.jl:22 [4] macro expansion @ ~/.julia/packages/GraphIO/yl1V9/test/DOT/runtests.jl:14 [inlined] [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1945 [inlined] [6] top-level scope @ ~/.julia/packages/GraphIO/yl1V9/test/DOT/runtests.jl:7 DOT: Test Failed at /home/pkgeval/.julia/packages/GraphIO/yl1V9/test/graphio.jl:42 Expression: rd == d Evaluated: Dict{String, AbstractGraph}("g2" => SimpleDiGraph{Int64}(6, [[1, 3], [3, 4], Int64[], [1, 3]], [[1, 4], Int64[], [1, 2, 4], [2]]), "g1" => SimpleGraph{Int64}(15, [[2, 3, 4, 5, 6], [1, 3, 4, 5, 6], [1, 2, 4, 5, 6], [1, 2, 3, 5, 6], [1, 2, 3, 4, 6], [1, 2, 3, 4, 5]])) == Dict{String, AbstractGraph}("g2" => SimpleDiGraph{Int64}(6, [[2, 3], [2, 3], Int64[], [1, 3]], [[4], [1, 2], [1, 2, 4], Int64[]]), "g1" => SimpleGraph{Int64}(15, [[2, 3, 4, 5, 6], [1, 3, 4, 5, 6], [1, 2, 4, 5, 6], [1, 2, 3, 5, 6], [1, 2, 3, 4, 6], [1, 2, 3, 4, 5]])) Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:744 [inlined] [2] read_test_mult(format::DOTFormat, d::Dict{String, AbstractGraph}, fname::String) @ Main ~/.julia/packages/GraphIO/yl1V9/test/graphio.jl:42 [3] macro expansion @ ~/.julia/packages/GraphIO/yl1V9/test/DOT/runtests.jl:15 [inlined] [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1945 [inlined] [5] top-level scope @ ~/.julia/packages/GraphIO/yl1V9/test/DOT/runtests.jl:7 ┌ Warning: Skipping unknown XML element 'warnelement' - further warnings will be suppressed └ @ GraphIOXML ~/.julia/packages/GraphIO/yl1V9/ext/GraphIOXML.jl:139 ┌ Warning: Skipping unknown node 'warnnode' - further warnings will be suppressed └ @ GraphIOXML ~/.julia/packages/GraphIO/yl1V9/ext/GraphIOXML.jl:68 Test Summary: | Pass Fail Total Time GraphIO | 161 3 164 2m49.8s Code quality | 11 11 54.5s Code formatting | 1 1 1m05.9s CDF | 2 2 4.4s EdgeList | 18 18 2.5s GML | 25 25 5.7s Pajek NET | 19 19 1.4s DOT | 11 3 14 21.0s GEXF | 6 6 1.8s Graph6 | 17 17 4.4s GraphML | 27 27 3.6s LGCompressed | 24 24 2.3s RNG of the outermost testset: Random.Xoshiro(0x461090d183b2a477, 0x7b034316cea87b56, 0xad3b7c02c295bbfd, 0xbbaafb71487323ca, 0x3af0a63cb7bebcf0) ERROR: LoadError: Some tests did not pass: 161 passed, 3 failed, 0 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/GraphIO/yl1V9/test/runtests.jl:16 Testing failed after 265.11s ERROR: LoadError: Package GraphIO errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2673 [3] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2522 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:538 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:515 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:168 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:157 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [9] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:155 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [12] include(mod::Module, _path::String) @ Base ./Base.jl:308 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:330 [14] _start() @ Base ./client.jl:563 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 324.54s: package has test failures