Package evaluation of MicrobiomeAnalysis on Julia 1.13.0-DEV.1055 (100ef9d641*) started at 2025-08-29T02:19:59.916 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 10.9s ################################################################################ # Installation # Installing MicrobiomeAnalysis... Resolving package versions... Installed Libuuid_jll ────────────────── v2.41.1+0 Installed Bzip2_jll ──────────────────── v1.0.9+0 Installed HarfBuzz_jll ───────────────── v8.5.1+0 Installed libass_jll ─────────────────── v0.17.4+0 Installed Qt6Base_jll ────────────────── v6.8.2+1 Installed libaom_jll ─────────────────── v3.12.1+0 Installed InlineStrings ──────────────── v1.4.5 Installed MKL_jll ────────────────────── v2025.2.0+0 Installed Cairo_jll ──────────────────── v1.18.5+0 Installed Xorg_libXinerama_jll ───────── v1.1.6+0 Installed Libtiff_jll ────────────────── v4.7.1+0 Installed PlotThemes ─────────────────── v3.3.0 Installed OrderedCollections ─────────── v1.8.1 Installed MultivariateStats ──────────── v0.9.0 Installed fzf_jll ────────────────────── v0.61.1+0 Installed libinput_jll ───────────────── v1.28.1+0 Installed Graphite2_jll ──────────────── v1.3.15+0 Installed SentinelArrays ─────────────── v1.4.8 Installed FdeSolver ──────────────────── v1.0.9 Installed Fontconfig_jll ─────────────── v2.17.1+0 Installed Distances ──────────────────── v0.10.12 Installed NaNMath ────────────────────── v1.1.3 Installed Opus_jll ───────────────────── v1.5.2+0 Installed LZO_jll ────────────────────── v2.10.3+0 Installed Ogg_jll ────────────────────── v1.3.6+0 Installed OpenSpecFun_jll ────────────── v0.5.6+0 Installed Xorg_libxcb_jll ────────────── v1.17.1+0 Installed Unzip ──────────────────────── v0.2.0 Installed Arpack ─────────────────────── v0.5.4 Installed Tables ─────────────────────── v1.12.1 Installed Xorg_xcb_util_wm_jll ───────── v0.4.2+0 Installed LERC_jll ───────────────────── v4.0.1+0 Installed Reexport ───────────────────── v1.2.2 Installed FFMPEG ─────────────────────── v0.4.4 Installed Missings ───────────────────── v1.2.0 Installed TableTraits ────────────────── v1.0.1 Installed Preferences ────────────────── v1.5.0 Installed SortingAlgorithms ──────────── v1.2.2 Installed LLVMOpenMP_jll ─────────────── v18.1.8+0 Installed Xorg_libICE_jll ────────────── v1.1.2+0 Installed eudev_jll ──────────────────── v3.2.14+0 Installed LaTeXStrings ───────────────── v1.4.0 Installed Grisu ──────────────────────── v1.0.2 Installed Crayons ────────────────────── v4.1.1 Installed Format ─────────────────────── v1.3.7 Installed EpollShim_jll ──────────────── v0.0.20230411+1 Installed oneTBB_jll ─────────────────── v2022.0.0+0 Installed Indexing ───────────────────── v1.1.1 Installed DelimitedFiles ─────────────── v1.9.1 Installed MacroTools ─────────────────── v0.5.16 Installed URIs ───────────────────────── v1.6.1 Installed DataStructures ─────────────── v0.18.22 Installed UnitfulLatexify ────────────── v1.7.0 Installed StatsBase ──────────────────── v0.33.21 Installed Xorg_xcb_util_jll ──────────── v0.4.1+0 Installed UnicodeFun ─────────────────── v0.4.1 Installed x264_jll ───────────────────── v10164.0.1+0 Installed Xorg_libXau_jll ────────────── v1.0.13+0 Installed CodecZlib ──────────────────── v0.7.8 Installed Xorg_libXfixes_jll ─────────── v6.0.1+0 Installed mtdev_jll ──────────────────── v1.1.7+0 Installed Qt6ShaderTools_jll ─────────── v6.8.2+1 Installed IntelOpenMP_jll ────────────── v2025.2.0+0 Installed DataValueInterfaces ────────── v1.0.0 Installed Libffi_jll ─────────────────── v3.4.7+0 Installed LoggingExtras ──────────────── v1.1.0 Installed Pixman_jll ─────────────────── v0.44.2+0 Installed libdecor_jll ───────────────── v0.2.2+0 Installed EcoBase ────────────────────── v0.1.7 Installed Expat_jll ──────────────────── v2.7.1+0 Installed Xorg_libXcursor_jll ────────── v1.2.4+0 Installed IrrationalConstants ────────── v0.2.4 Installed libpng_jll ─────────────────── v1.6.50+0 Installed InlineTest ─────────────────── v0.2.0 Installed Contour ────────────────────── v0.6.3 Installed ColorVectorSpace ───────────── v0.11.0 Installed StableRNGs ─────────────────── v1.0.3 Installed Xorg_xcb_util_keysyms_jll ──── v0.4.1+0 Installed BitFlags ───────────────────── v0.1.9 Installed libfdk_aac_jll ─────────────── v2.0.4+0 Installed HTTP ───────────────────────── v1.10.17 Installed Scratch ────────────────────── v1.3.0 Installed FFMPEG_jll ─────────────────── v7.1.1+0 Installed WorkerUtilities ────────────── v1.6.1 Installed SimpleBufferStream ─────────── v1.2.0 Installed PooledArrays ───────────────── v1.4.3 Installed Qt6Declarative_jll ─────────── v6.8.2+1 Installed DocStringExtensions ────────── v0.9.5 Installed JLFzf ──────────────────────── v0.1.11 Installed RelocatableFolders ─────────── v1.0.1 Installed IteratorInterfaceExtensions ── v1.0.0 Installed ConcurrentUtilities ────────── v2.5.0 Installed ReTest ─────────────────────── v0.3.4 Installed RecipesBase ────────────────── v1.3.4 Installed DataAPI ────────────────────── v1.16.0 Installed Xorg_libXi_jll ─────────────── v1.8.3+0 Installed libevdev_jll ───────────────── v1.13.4+0 Installed InvertedIndices ────────────── v1.3.1 Installed Plots ──────────────────────── v1.40.19 Installed Wayland_jll ────────────────── v1.24.0+0 Installed Xorg_libxkbfile_jll ────────── v1.1.3+0 Installed Measures ───────────────────── v0.3.2 Installed Colors ─────────────────────── v0.13.1 Installed AbstractFFTs ───────────────── v1.5.0 Installed Latexify ───────────────────── v0.16.9 Installed Libglvnd_jll ───────────────── v1.7.1+1 Installed Xorg_xkbcomp_jll ───────────── v1.4.7+0 Installed Requires ───────────────────── v1.3.1 Installed Glib_jll ───────────────────── v2.84.3+0 Installed ColorTypes ─────────────────── v0.12.1 Installed StringManipulation ─────────── v0.4.1 Installed LogExpFunctions ────────────── v0.3.29 Installed Vulkan_Loader_jll ──────────── v1.3.243+0 Installed Xorg_xcb_util_cursor_jll ───── v0.1.5+0 Installed Parsers ────────────────────── v2.8.3 Installed JSON ───────────────────────── v0.21.4 Installed PrettyTables ───────────────── v2.4.0 Installed Xorg_xcb_util_renderutil_jll ─ v0.3.10+0 Installed Arpack_jll ─────────────────── v3.5.1+1 Installed Xorg_xkeyboard_config_jll ──── v2.44.0+0 Installed Xorg_libXdmcp_jll ──────────── v1.1.6+0 Installed Unitful ────────────────────── v1.24.0 Installed WeakRefStrings ─────────────── v1.4.2 Installed Xorg_libSM_jll ─────────────── v1.2.6+0 Installed XZ_jll ─────────────────────── v5.8.1+0 Installed x265_jll ───────────────────── v4.1.0+0 Installed CSV ────────────────────────── v0.10.15 Installed JLLWrappers ────────────────── v1.7.1 Installed Pango_jll ──────────────────── v1.56.3+0 Installed DataFrames ─────────────────── v1.7.1 Installed Xorg_xtrans_jll ────────────── v1.6.0+0 Installed GR_jll ─────────────────────── v0.73.17+0 Installed RecipesPipeline ────────────── v0.6.12 Installed JpegTurbo_jll ──────────────── v3.1.2+0 Installed FilePathsBase ──────────────── v0.9.24 Installed Dbus_jll ───────────────────── v1.16.2+0 Installed Libmount_jll ───────────────── v2.41.1+0 Installed ExceptionUnwrapping ────────── v0.1.11 Installed Compat ─────────────────────── v4.18.0 Installed Dictionaries ───────────────── v0.3.29 Installed TranscodingStreams ─────────── v0.11.3 Installed Xorg_libX11_jll ────────────── v1.8.12+0 Installed PlotUtils ──────────────────── v1.4.3 Installed TensorCore ─────────────────── v0.1.1 Installed Statistics ─────────────────── v1.11.1 Installed StatsAPI ───────────────────── v1.7.1 Installed PrecompileTools ────────────── v1.3.2 Installed ColorSchemes ───────────────── v3.30.0 Installed SummarizedExperiments ──────── v0.2.0 Installed xkbcommon_jll ──────────────── v1.9.2+0 Installed Xorg_xcb_util_image_jll ────── v0.4.1+0 Installed OpenSSL ────────────────────── v1.5.0 Installed MbedTLS ────────────────────── v1.1.9 Installed GettextRuntime_jll ─────────── v0.22.4+0 Installed FriBidi_jll ────────────────── v1.0.17+0 Installed GLFW_jll ───────────────────── v3.4.0+2 Installed Xorg_libXrender_jll ────────── v0.9.12+0 Installed LAME_jll ───────────────────── v3.100.3+0 Installed libvorbis_jll ──────────────── v1.3.8+0 Installed Showoff ────────────────────── v1.0.3 Installed FixedPointNumbers ──────────── v0.8.5 Installed FreeType2_jll ──────────────── v2.13.4+0 Installed SpecialFunctions ───────────── v2.5.1 Installed MicrobiomeAnalysis ─────────── v0.4.0 Installed FFTW ───────────────────────── v1.9.0 Installed FFTW_jll ───────────────────── v3.3.11+0 Installed Libiconv_jll ───────────────── v1.18.0+0 Installed MbedTLS_jll ────────────────── v2.28.6+2 Installed Xorg_libXext_jll ───────────── v1.3.7+0 Installed Xorg_libXrandr_jll ─────────── v1.5.5+0 Installed Qt6Wayland_jll ─────────────── v6.8.2+1 Installed GR ─────────────────────────── v0.73.17 Installed MultiAssayExperiments ──────── v0.2.0 Installed Microbiome ─────────────────── v0.9.4 Installing 78 artifacts Installed artifact Xorg_xcb_util_keysyms 17.8 KiB Installed artifact Xorg_xtrans 48.2 KiB Installed artifact Pixman 372.2 KiB Installed artifact MbedTLS 2.1 MiB Installed artifact libdecor 44.1 KiB Installed artifact Ogg 250.3 KiB Installed artifact libfdk_aac 2.8 MiB Installed artifact LLVMOpenMP 661.6 KiB Installed artifact Xorg_libXcursor 227.1 KiB Installed artifact Xorg_libXext 699.9 KiB Installed artifact Cairo 2.2 MiB Installed artifact Libiconv 1.9 MiB Installed artifact Xorg_libSM 164.1 KiB Installed artifact Xorg_xcb_util_cursor 56.8 KiB Installed artifact LAME 292.5 KiB Installed artifact libevdev 117.1 KiB Installed artifact libpng 328.4 KiB Installed artifact Xorg_libXfixes 195.9 KiB Installed artifact JpegTurbo 1.6 MiB Installed artifact Expat 274.7 KiB Installed artifact Fontconfig 984.8 KiB Installed artifact GettextRuntime 543.0 KiB Installed artifact Libuuid 3.6 MiB Installed artifact Xorg_libXrender 435.9 KiB Installed artifact Xorg_libxcb 2.1 MiB Installed artifact Xorg_libxkbfile 486.7 KiB Installed artifact libinput 1.0 MiB Installed artifact LZO 208.9 KiB Installed artifact x265 1.4 MiB Installed artifact Qt6ShaderTools 2.1 MiB Installed artifact libass 427.8 KiB Installed artifact oneTBB 435.6 KiB Installed artifact Xorg_xcb_util_wm 147.9 KiB Installed artifact Opus 925.5 KiB Installed artifact Graphite2 120.2 KiB Installed artifact Bzip2 503.5 KiB Installed artifact eudev 3.9 MiB Installed artifact Glib 7.7 MiB Installed artifact XZ 1.5 MiB Installed artifact Xorg_libXdmcp 67.7 KiB Installed artifact libvorbis 271.0 KiB Installed artifact LERC 272.9 KiB Installed artifact GR 16.2 MiB Installed artifact Arpack 147.2 KiB Installed artifact Libtiff 3.2 MiB Installed artifact Libffi 44.2 KiB Installed artifact Pango 1.1 MiB Installed artifact Xorg_libXau 36.6 KiB Installed artifact Dbus 489.8 KiB Installed artifact mtdev 79.6 KiB Installed artifact Xorg_libICE 384.9 KiB Installed artifact Xorg_xcb_util_renderutil 32.1 KiB Installed artifact Vulkan_Loader 177.3 KiB Installed artifact Libglvnd 833.5 KiB Installed artifact Xorg_libXinerama 50.1 KiB Installed artifact Xorg_libXi 1.6 MiB Installed artifact fzf 3.3 MiB Installed artifact FriBidi 78.9 KiB Installed artifact xkbcommon 263.7 KiB Installed artifact GLFW 180.1 KiB Installed artifact HarfBuzz 1.7 MiB Installed artifact Xorg_xcb_util 39.5 KiB Installed artifact Xorg_xkbcomp 274.8 KiB Installed artifact x264 2.1 MiB Installed artifact libaom 6.4 MiB Installed artifact Libmount 6.5 MiB Installed artifact FreeType2 1.5 MiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact Xorg_xcb_util_image 54.3 KiB Installed artifact Xorg_libXrandr 354.5 KiB Installed artifact Wayland 390.6 KiB Installed artifact Xorg_xkeyboard_config 537.5 KiB Installed artifact Qt6Wayland 2.2 MiB Installed artifact FFTW 2.2 MiB Installed artifact Qt6Base 20.6 MiB Installed artifact FFMPEG 11.4 MiB Installed artifact Xorg_libX11 13.9 MiB Installed artifact Qt6Declarative 21.6 MiB Updating `~/.julia/environments/v1.13/Project.toml` [09137a06] + MicrobiomeAnalysis v0.4.0 Updating `~/.julia/environments/v1.13/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [7d9fca2a] + Arpack v0.5.4 [d1d4a3ce] + BitFlags v0.1.9 [336ed68f] + CSV v0.10.15 [944b1d66] + CodecZlib v0.7.8 [35d6a980] + ColorSchemes v3.30.0 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.1 [34da2185] + Compat v4.18.0 [f0e56b4a] + ConcurrentUtilities v2.5.0 [d38c429a] + Contour v0.6.3 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.7.1 ⌅ [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 ⌅ [85a47980] + Dictionaries v0.3.29 [b4f34e82] + Distances v0.10.12 [ffbed154] + DocStringExtensions v0.9.5 [a58aae7d] + EcoBase v0.1.7 [460bff9d] + ExceptionUnwrapping v0.1.11 [c87230d0] + FFMPEG v0.4.4 [7a1cc6ca] + FFTW v1.9.0 [1746e360] + FdeSolver v1.0.9 [48062228] + FilePathsBase v0.9.24 [53c48c17] + FixedPointNumbers v0.8.5 [1fa38f19] + Format v1.3.7 [28b8d3ca] + GR v0.73.17 [42e2da0e] + Grisu v1.0.2 [cd3eb016] + HTTP v1.10.17 [313cdc1a] + Indexing v1.1.1 [842dd82b] + InlineStrings v1.4.5 [bd334432] + InlineTest v0.2.0 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [1019f520] + JLFzf v0.1.11 [692b3bcd] + JLLWrappers v1.7.1 [682c06a0] + JSON v0.21.4 [b964fa9f] + LaTeXStrings v1.4.0 [23fbe1c1] + Latexify v0.16.9 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.1.0 [1914dd2f] + MacroTools v0.5.16 [739be429] + MbedTLS v1.1.9 [442fdcdd] + Measures v0.3.2 ⌅ [3bd8f0ae] + Microbiome v0.9.4 [09137a06] + MicrobiomeAnalysis v0.4.0 [e1d29d7a] + Missings v1.2.0 [c9137f73] + MultiAssayExperiments v0.2.0 ⌅ [6f286f6a] + MultivariateStats v0.9.0 [77ba4419] + NaNMath v1.1.3 [4d8831e6] + OpenSSL v1.5.0 [bac558e1] + OrderedCollections v1.8.1 [69de0a69] + Parsers v2.8.3 [ccf2f8ad] + PlotThemes v3.3.0 [995b91a9] + PlotUtils v1.4.3 [91a5bcdd] + Plots v1.40.19 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.5.0 ⌅ [08abe8d2] + PrettyTables v2.4.0 [e0db7c4e] + ReTest v0.3.4 [3cdcf5f2] + RecipesBase v1.3.4 [01d81517] + RecipesPipeline v0.6.12 [189a3867] + Reexport v1.2.2 [05181044] + RelocatableFolders v1.0.1 [ae029012] + Requires v1.3.1 [6c6a2e73] + Scratch v1.3.0 [91c51154] + SentinelArrays v1.4.8 [992d4aef] + Showoff v1.0.3 [777ac1f9] + SimpleBufferStream v1.2.0 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.5.1 [860ef19b] + StableRNGs v1.0.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 ⌅ [2913bbd2] + StatsBase v0.33.21 [892a3eda] + StringManipulation v0.4.1 [b04b66ec] + SummarizedExperiments v0.2.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [62fd8b95] + TensorCore v0.1.1 [3bb67fe8] + TranscodingStreams v0.11.3 [5c2747f8] + URIs v1.6.1 [1cfade01] + UnicodeFun v0.4.1 [1986cc42] + Unitful v1.24.0 [45397f5d] + UnitfulLatexify v1.7.0 [41fe7b60] + Unzip v0.2.0 [ea10d353] + WeakRefStrings v1.4.2 [76eceee3] + WorkerUtilities v1.6.1 ⌅ [68821587] + Arpack_jll v3.5.1+1 [6e34b625] + Bzip2_jll v1.0.9+0 [83423d85] + Cairo_jll v1.18.5+0 [ee1fde0b] + Dbus_jll v1.16.2+0 [2702e6a9] + EpollShim_jll v0.0.20230411+1 [2e619515] + Expat_jll v2.7.1+0 [b22a6f82] + FFMPEG_jll v7.1.1+0 [f5851436] + FFTW_jll v3.3.11+0 [a3f928ae] + Fontconfig_jll v2.17.1+0 [d7e528f0] + FreeType2_jll v2.13.4+0 [559328eb] + FriBidi_jll v1.0.17+0 [0656b61e] + GLFW_jll v3.4.0+2 [d2c73de3] + GR_jll v0.73.17+0 [b0724c58] + GettextRuntime_jll v0.22.4+0 [7746bdde] + Glib_jll v2.84.3+0 [3b182d85] + Graphite2_jll v1.3.15+0 [2e76f6c2] + HarfBuzz_jll v8.5.1+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [aacddb02] + JpegTurbo_jll v3.1.2+0 [c1c5ebd0] + LAME_jll v3.100.3+0 [88015f11] + LERC_jll v4.0.1+0 [1d63c593] + LLVMOpenMP_jll v18.1.8+0 [dd4b983a] + LZO_jll v2.10.3+0 [e9f186c6] + Libffi_jll v3.4.7+0 [7e76a0d4] + Libglvnd_jll v1.7.1+1 [94ce4f54] + Libiconv_jll v1.18.0+0 [4b2f31a3] + Libmount_jll v2.41.1+0 [89763e89] + Libtiff_jll v4.7.1+0 [38a345b3] + Libuuid_jll v2.41.1+0 [856f044c] + MKL_jll v2025.2.0+0 [c8ffd9c3] + MbedTLS_jll v2.28.6+2 [e7412a2a] + Ogg_jll v1.3.6+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [91d4177d] + Opus_jll v1.5.2+0 [36c8627f] + Pango_jll v1.56.3+0 ⌅ [30392449] + Pixman_jll v0.44.2+0 [c0090381] + Qt6Base_jll v6.8.2+1 [629bc702] + Qt6Declarative_jll v6.8.2+1 [ce943373] + Qt6ShaderTools_jll v6.8.2+1 [e99dba38] + Qt6Wayland_jll v6.8.2+1 [a44049a8] + Vulkan_Loader_jll v1.3.243+0 [a2964d1f] + Wayland_jll v1.24.0+0 [ffd25f8a] + XZ_jll v5.8.1+0 [f67eecfb] + Xorg_libICE_jll v1.1.2+0 [c834827a] + Xorg_libSM_jll v1.2.6+0 [4f6342f7] + Xorg_libX11_jll v1.8.12+0 [0c0b7dd1] + Xorg_libXau_jll v1.0.13+0 [935fb764] + Xorg_libXcursor_jll v1.2.4+0 [a3789734] + Xorg_libXdmcp_jll v1.1.6+0 [1082639a] + Xorg_libXext_jll v1.3.7+0 [d091e8ba] + Xorg_libXfixes_jll v6.0.1+0 [a51aa0fd] + Xorg_libXi_jll v1.8.3+0 [d1454406] + Xorg_libXinerama_jll v1.1.6+0 [ec84b674] + Xorg_libXrandr_jll v1.5.5+0 [ea2f1a96] + Xorg_libXrender_jll v0.9.12+0 [c7cfdc94] + Xorg_libxcb_jll v1.17.1+0 [cc61e674] + Xorg_libxkbfile_jll v1.1.3+0 [e920d4aa] + Xorg_xcb_util_cursor_jll v0.1.5+0 [12413925] + Xorg_xcb_util_image_jll v0.4.1+0 [2def613f] + Xorg_xcb_util_jll v0.4.1+0 [975044d2] + Xorg_xcb_util_keysyms_jll v0.4.1+0 [0d47668e] + Xorg_xcb_util_renderutil_jll v0.3.10+0 [c22f9ab0] + Xorg_xcb_util_wm_jll v0.4.2+0 [35661453] + Xorg_xkbcomp_jll v1.4.7+0 [33bec58e] + Xorg_xkeyboard_config_jll v2.44.0+0 [c5fb5394] + Xorg_xtrans_jll v1.6.0+0 [35ca27e7] + eudev_jll v3.2.14+0 [214eeab7] + fzf_jll v0.61.1+0 [a4ae2306] + libaom_jll v3.12.1+0 [0ac62f75] + libass_jll v0.17.4+0 [1183f4f0] + libdecor_jll v0.2.2+0 [2db6ffa8] + libevdev_jll v1.13.4+0 [f638f0a6] + libfdk_aac_jll v2.0.4+0 [36db933b] + libinput_jll v1.28.1+0 [b53b4c65] + libpng_jll v1.6.50+0 [f27f6e37] + libvorbis_jll v1.3.8+0 [009596ad] + mtdev_jll v1.1.7+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 [1270edf5] + x264_jll v10164.0.1+0 [dfaa095f] + x265_jll v4.1.0+0 [d8fb68d0] + xkbcommon_jll v1.9.2+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+1 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.8.12 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.2+0 [efcefdf7] + PCRE2_jll v10.46.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.13.1+0 [8e850ede] + nghttp2_jll v1.66.0+0 [3f19e933] + p7zip_jll v17.6.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 30.59s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4610.8 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. Precompiling package dependencies... ERROR: LoadError: The following 2 direct dependencies failed to precompile: MicrobiomeAnalysis Failed to precompile MicrobiomeAnalysis [09137a06-29c6-4e66-9476-ab7e4b8c7492] to "/home/pkgeval/.julia/compiled/v1.13/MicrobiomeAnalysis/jl_3nqLKg" (ProcessExited(1)). WARNING: Imported binding Test.pop_testset was undeclared at import time during import to Testset. WARNING: Imported binding Test.push_testset was undeclared at import time during import to Testset. ┌ Error: Precompilation failed, this is the captured stdout (114 chars): └ @ ReTest ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:36 Pass | Time / Compile / GC | Alloc ΔRSS | ReTest._ReTestPrecompileTests: ┌ Error: And this is the captured stderr (0 chars): └ @ ReTest ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:39 ERROR: LoadError: TaskFailedException Stacktrace: [1] #wait#584 @ ./task.jl:363 [inlined] [2] wait @ ./task.jl:360 [inlined] [3] retest(::Union{Regex, AbstractString, Integer, Module, Symbol, Tuple, ReTest.Pattern, AbstractArray, Pair{Module, <:Union{Regex, AbstractString, Integer, Symbol, Tuple, ReTest.Pattern, AbstractArray}}}, ::Vararg{Union{Regex, AbstractString, Integer, Module, Symbol, Tuple, ReTest.Pattern, AbstractArray, Pair{Module, <:Union{Regex, AbstractString, Integer, Symbol, Tuple, ReTest.Pattern, AbstractArray}}}}; dry::Bool, stats::Bool, shuffle::Bool, group::Bool, verbose::Bool, recursive::Bool, id::Nothing, strict::Bool, dup::Bool, static::Nothing, load::Bool, seed::Bool, marks::Bool, tag::Vector{Symbol}, spin::Bool, clear::Bool) @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1186 [4] kwcall(::@NamedTuple{recursive::Bool, stats::Bool, spin::Bool}, ::typeof(InlineTest.retest), ::Union{Regex, AbstractString, Integer, Module, Symbol, Tuple, ReTest.Pattern, AbstractArray, Pair{Module, <:Union{Regex, AbstractString, Integer, Symbol, Tuple, ReTest.Pattern, AbstractArray}}}, ::Vararg{Union{Regex, AbstractString, Integer, Module, Symbol, Tuple, ReTest.Pattern, AbstractArray, Pair{Module, <:Union{Regex, AbstractString, Integer, Symbol, Tuple, ReTest.Pattern, AbstractArray}}}}) @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:750 [5] #137 @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:26 [inlined] [6] redirect_stdio(f::ReTest.var"#137#138"; stdin::Nothing, stderr::Pipe, stdout::Pipe) @ Base ./stream.jl:1443 [7] kwcall(::@NamedTuple{stderr::Pipe, stdout::Pipe}, ::typeof(redirect_stdio), f::Function) @ Base ./stream.jl:1406 [8] macro expansion @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:25 [inlined] [9] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [10] macro expansion @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:23 [inlined] [11] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined] [12] top-level scope @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:118 [13] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:309 [14] top-level scope @ ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1751 [15] include(mod::Module, _path::String) @ Base ./Base.jl:308 [16] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3019 [17] top-level scope @ stdin:5 [18] eval(m::Module, e::Any) @ Core ./boot.jl:489 [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2865 [20] include_string @ ./loading.jl:2875 [inlined] [21] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [22] _start() @ Base ./client.jl:563 nested task error: TaskFailedException nested task error: UndefVarError: `push_testset` not defined in `ReTest.Testset` Suggestion: this global was defined as `Test.push_testset` but not assigned a value. Stacktrace: [1] top-level scope @ ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:517 [2] macro expansion @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:12 [inlined] [3] macro expansion @ ~/.julia/packages/ReTest/3Ikse/src/testset.jl:517 [inlined] [4] eval(m::Module, e::Any) @ Core ./boot.jl:489 [5] (::ReTest.var"#110#111"{ReTest.Testset.Format})(mod::Module, ts::ReTest.TestsetExpr, pat::ReTest.And, chan::@NamedTuple{out::Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, compute::Channel{Nothing}, preview::Nothing}) @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1154 [6] #local_remotecall_thunk##0 @ /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:425 [inlined] [7] run_work_thunk(thunk::Distributed.var"#local_remotecall_thunk##0#local_remotecall_thunk##1"{ReTest.var"#110#111"{ReTest.Testset.Format}, Tuple{Module, ReTest.TestsetExpr, ReTest.And, @NamedTuple{out::Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, compute::Channel{Nothing}, preview::Nothing}}, @Kwargs{}}, print_error::Bool) @ Distributed /opt/julia/share/julia/stdlib/v1.13/Distributed/src/process_messages.jl:70 [8] remotecall_fetch(::Function, ::Distributed.LocalProcess, ::Module, ::Vararg{Any}; kwargs::@Kwargs{}) @ Distributed /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:450 [9] remotecall_fetch @ /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:449 [inlined] [10] remotecall_fetch @ /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:492 [inlined] [11] (::ReTest.var"#106#107"{Int64, ReTest.Testset.Format, Nothing, ReTest.Testset.ReTestSet, Base.Threads.Atomic{Bool}, Channel{Nothing}, Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, Vector{Any}, ReTest.And, Module})() @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1151 Stacktrace: [1] remotecall_fetch(::Function, ::Distributed.LocalProcess, ::Module, ::Vararg{Any}; kwargs::@Kwargs{}) @ Distributed /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:451 [2] remotecall_fetch @ /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:449 [inlined] [3] remotecall_fetch @ /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:492 [inlined] [4] (::ReTest.var"#106#107"{Int64, ReTest.Testset.Format, Nothing, ReTest.Testset.ReTestSet, Base.Threads.Atomic{Bool}, Channel{Nothing}, Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, Vector{Any}, ReTest.And, Module})() @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1151 Stacktrace: [1] sync_end(c::Channel{Any}) @ Base ./task.jl:601 [2] macro expansion @ ./task.jl:634 [inlined] [3] (::ReTest.var"#96#97"{Bool, ReTest.Testset.Format, Bool, Base.RefValue{Int64}, Bool, ReTest.var"#take_latest!#91", Nothing, ReentrantLock, Bool, ReTest.Testset.ReTestSet, Base.Threads.Atomic{Bool}, Base.RefValue{Exception}, Channel{Nothing}, Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, Vector{Any}, ReTest.And, Module})() @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1104 in expression starting at /home/pkgeval/.julia/packages/ReTest/3Ikse/src/precompile.jl:19 in expression starting at /home/pkgeval/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile ReTest [e0db7c4e-2690-44b9-bad6-7687da720f89] to "/home/pkgeval/.julia/compiled/v1.13/ReTest/jl_sM7RF4" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3306 [3] kwcall(::@NamedTuple{reasons::Dict{String, Int64}, loadable_exts::Nothing}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:3184 [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})() @ Base ./loading.jl:2670 [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [6] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [8] #invokelatest_gr#233 @ ./reflection.jl:1335 [inlined] [9] invokelatest_gr @ ./reflection.jl:1327 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3877 [11] maybe_cachefile_lock @ ./loading.jl:3874 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2656 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2484 [14] macro expansion @ ./loading.jl:2412 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2376 [17] require @ ./loading.jl:2352 [inlined] [18] eval_import_path @ ./module.jl:36 [inlined] [19] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [20] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [21] top-level scope @ ~/.julia/packages/Microbiome/BvZqT/src/Microbiome.jl:74 [22] include(mod::Module, _path::String) @ Base ./Base.jl:308 [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3019 [24] top-level scope @ stdin:5 [25] eval(m::Module, e::Any) @ Core ./boot.jl:489 [26] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2865 [27] include_string @ ./loading.jl:2875 [inlined] [28] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [29] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/Microbiome/BvZqT/src/Microbiome.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Microbiome [3bd8f0ae-a0f2-5238-a5af-e1b399a4940c] to "/home/pkgeval/.julia/compiled/v1.13/Microbiome/jl_uauUYh" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3306 [3] kwcall(::@NamedTuple{reasons::Dict{String, Int64}, loadable_exts::Nothing}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:3184 [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})() @ Base ./loading.jl:2670 [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [6] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [8] #invokelatest_gr#233 @ ./reflection.jl:1335 [inlined] [9] invokelatest_gr @ ./reflection.jl:1327 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3877 [11] maybe_cachefile_lock @ ./loading.jl:3874 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2656 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2484 [14] macro expansion @ ./loading.jl:2412 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2376 [17] require @ ./loading.jl:2352 [inlined] [18] eval_import_path @ ./module.jl:36 [inlined] [19] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [20] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr}) @ Base ./module.jl:101 [21] top-level scope @ ~/.julia/packages/MicrobiomeAnalysis/fZGRE/src/MicrobiomeAnalysis.jl:10 [22] include(mod::Module, _path::String) @ Base ./Base.jl:308 [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3019 [24] top-level scope @ stdin:5 [25] eval(m::Module, e::Any) @ Core ./boot.jl:489 [26] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2865 [27] include_string @ ./loading.jl:2875 [inlined] [28] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [29] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/MicrobiomeAnalysis/fZGRE/src/MicrobiomeAnalysis.jl:1 in expression starting at stdin:5 Microbiome Failed to precompile Microbiome [3bd8f0ae-a0f2-5238-a5af-e1b399a4940c] to "/home/pkgeval/.julia/compiled/v1.13/Microbiome/jl_6xPANR" (ProcessExited(1)). WARNING: Imported binding Test.pop_testset was undeclared at import time during import to Testset. WARNING: Imported binding Test.push_testset was undeclared at import time during import to Testset. ┌ Error: Precompilation failed, this is the captured stdout (114 chars): └ @ ReTest ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:36 Pass | Time / Compile / GC | Alloc ΔRSS | ReTest._ReTestPrecompileTests: ┌ Error: And this is the captured stderr (0 chars): └ @ ReTest ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:39 ERROR: LoadError: TaskFailedException Stacktrace: [1] #wait#584 @ ./task.jl:363 [inlined] [2] wait @ ./task.jl:360 [inlined] [3] retest(::Union{Regex, AbstractString, Integer, Module, Symbol, Tuple, ReTest.Pattern, AbstractArray, Pair{Module, <:Union{Regex, AbstractString, Integer, Symbol, Tuple, ReTest.Pattern, AbstractArray}}}, ::Vararg{Union{Regex, AbstractString, Integer, Module, Symbol, Tuple, ReTest.Pattern, AbstractArray, Pair{Module, <:Union{Regex, AbstractString, Integer, Symbol, Tuple, ReTest.Pattern, AbstractArray}}}}; dry::Bool, stats::Bool, shuffle::Bool, group::Bool, verbose::Bool, recursive::Bool, id::Nothing, strict::Bool, dup::Bool, static::Nothing, load::Bool, seed::Bool, marks::Bool, tag::Vector{Symbol}, spin::Bool, clear::Bool) @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1186 [4] kwcall(::@NamedTuple{recursive::Bool, stats::Bool, spin::Bool}, ::typeof(InlineTest.retest), ::Union{Regex, AbstractString, Integer, Module, Symbol, Tuple, ReTest.Pattern, AbstractArray, Pair{Module, <:Union{Regex, AbstractString, Integer, Symbol, Tuple, ReTest.Pattern, AbstractArray}}}, ::Vararg{Union{Regex, AbstractString, Integer, Module, Symbol, Tuple, ReTest.Pattern, AbstractArray, Pair{Module, <:Union{Regex, AbstractString, Integer, Symbol, Tuple, ReTest.Pattern, AbstractArray}}}}) @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:750 [5] #137 @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:26 [inlined] [6] redirect_stdio(f::ReTest.var"#137#138"; stdin::Nothing, stderr::Pipe, stdout::Pipe) @ Base ./stream.jl:1443 [7] kwcall(::@NamedTuple{stderr::Pipe, stdout::Pipe}, ::typeof(redirect_stdio), f::Function) @ Base ./stream.jl:1406 [8] macro expansion @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:25 [inlined] [9] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [10] macro expansion @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:23 [inlined] [11] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined] [12] top-level scope @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:118 [13] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:309 [14] top-level scope @ ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1751 [15] include(mod::Module, _path::String) @ Base ./Base.jl:308 [16] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3019 [17] top-level scope @ stdin:5 [18] eval(m::Module, e::Any) @ Core ./boot.jl:489 [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2865 [20] include_string @ ./loading.jl:2875 [inlined] [21] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [22] _start() @ Base ./client.jl:563 nested task error: TaskFailedException nested task error: UndefVarError: `push_testset` not defined in `ReTest.Testset` Suggestion: this global was defined as `Test.push_testset` but not assigned a value. Stacktrace: [1] top-level scope @ ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:517 [2] macro expansion @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:12 [inlined] [3] macro expansion @ ~/.julia/packages/ReTest/3Ikse/src/testset.jl:517 [inlined] [4] eval(m::Module, e::Any) @ Core ./boot.jl:489 [5] (::ReTest.var"#110#111"{ReTest.Testset.Format})(mod::Module, ts::ReTest.TestsetExpr, pat::ReTest.And, chan::@NamedTuple{out::Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, compute::Channel{Nothing}, preview::Nothing}) @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1154 [6] #local_remotecall_thunk##0 @ /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:425 [inlined] [7] run_work_thunk(thunk::Distributed.var"#local_remotecall_thunk##0#local_remotecall_thunk##1"{ReTest.var"#110#111"{ReTest.Testset.Format}, Tuple{Module, ReTest.TestsetExpr, ReTest.And, @NamedTuple{out::Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, compute::Channel{Nothing}, preview::Nothing}}, @Kwargs{}}, print_error::Bool) @ Distributed /opt/julia/share/julia/stdlib/v1.13/Distributed/src/process_messages.jl:70 [8] remotecall_fetch(::Function, ::Distributed.LocalProcess, ::Module, ::Vararg{Any}; kwargs::@Kwargs{}) @ Distributed /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:450 [9] remotecall_fetch @ /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:449 [inlined] [10] remotecall_fetch @ /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:492 [inlined] [11] (::ReTest.var"#106#107"{Int64, ReTest.Testset.Format, Nothing, ReTest.Testset.ReTestSet, Base.Threads.Atomic{Bool}, Channel{Nothing}, Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, Vector{Any}, ReTest.And, Module})() @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1151 Stacktrace: [1] remotecall_fetch(::Function, ::Distributed.LocalProcess, ::Module, ::Vararg{Any}; kwargs::@Kwargs{}) @ Distributed /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:451 [2] remotecall_fetch @ /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:449 [inlined] [3] remotecall_fetch @ /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:492 [inlined] [4] (::ReTest.var"#106#107"{Int64, ReTest.Testset.Format, Nothing, ReTest.Testset.ReTestSet, Base.Threads.Atomic{Bool}, Channel{Nothing}, Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, Vector{Any}, ReTest.And, Module})() @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1151 Stacktrace: [1] sync_end(c::Channel{Any}) @ Base ./task.jl:601 [2] macro expansion @ ./task.jl:634 [inlined] [3] (::ReTest.var"#96#97"{Bool, ReTest.Testset.Format, Bool, Base.RefValue{Int64}, Bool, ReTest.var"#take_latest!#91", Nothing, ReentrantLock, Bool, ReTest.Testset.ReTestSet, Base.Threads.Atomic{Bool}, Base.RefValue{Exception}, Channel{Nothing}, Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, Vector{Any}, ReTest.And, Module})() @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1104 in expression starting at /home/pkgeval/.julia/packages/ReTest/3Ikse/src/precompile.jl:19 in expression starting at /home/pkgeval/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile ReTest [e0db7c4e-2690-44b9-bad6-7687da720f89] to "/home/pkgeval/.julia/compiled/v1.13/ReTest/jl_MnXSPk" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3306 [3] kwcall(::@NamedTuple{reasons::Dict{String, Int64}, loadable_exts::Nothing}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:3184 [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})() @ Base ./loading.jl:2670 [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [6] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [8] #invokelatest_gr#233 @ ./reflection.jl:1335 [inlined] [9] invokelatest_gr @ ./reflection.jl:1327 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3877 [11] maybe_cachefile_lock @ ./loading.jl:3874 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2656 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2484 [14] macro expansion @ ./loading.jl:2412 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2376 [17] require @ ./loading.jl:2352 [inlined] [18] eval_import_path @ ./module.jl:36 [inlined] [19] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [20] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [21] top-level scope @ ~/.julia/packages/Microbiome/BvZqT/src/Microbiome.jl:74 [22] include(mod::Module, _path::String) @ Base ./Base.jl:308 [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3019 [24] top-level scope @ stdin:5 [25] eval(m::Module, e::Any) @ Core ./boot.jl:489 [26] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2865 [27] include_string @ ./loading.jl:2875 [inlined] [28] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [29] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/Microbiome/BvZqT/src/Microbiome.jl:1 in expression starting at stdin:5 in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 851.57s ################################################################################ # Testing # Testing MicrobiomeAnalysis Status `/tmp/jl_TkPQmd/Project.toml` [336ed68f] CSV v0.10.15 [a93c6f00] DataFrames v1.7.1 ⌅ [864edb3b] DataStructures v0.18.22 [b4f34e82] Distances v0.10.12 [1746e360] FdeSolver v1.0.9 ⌅ [3bd8f0ae] Microbiome v0.9.4 [09137a06] MicrobiomeAnalysis v0.4.0 [c9137f73] MultiAssayExperiments v0.2.0 ⌅ [6f286f6a] MultivariateStats v0.9.0 [91a5bcdd] Plots v1.40.19 [189a3867] Reexport v1.2.2 [1bc83da4] SafeTestsets v0.1.0 [10745b16] Statistics v1.11.1 [b04b66ec] SummarizedExperiments v0.2.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_TkPQmd/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 [7d9fca2a] Arpack v0.5.4 [d1d4a3ce] BitFlags v0.1.9 [336ed68f] CSV v0.10.15 [944b1d66] CodecZlib v0.7.8 [35d6a980] ColorSchemes v3.30.0 [3da002f7] ColorTypes v0.12.1 [c3611d14] ColorVectorSpace v0.11.0 [5ae59095] Colors v0.13.1 [34da2185] Compat v4.18.0 [f0e56b4a] ConcurrentUtilities v2.5.0 [d38c429a] Contour v0.6.3 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.7.1 ⌅ [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [8bb1440f] DelimitedFiles v1.9.1 ⌅ [85a47980] Dictionaries v0.3.29 [b4f34e82] Distances v0.10.12 [ffbed154] DocStringExtensions v0.9.5 [a58aae7d] EcoBase v0.1.7 [460bff9d] ExceptionUnwrapping v0.1.11 [c87230d0] FFMPEG v0.4.4 [7a1cc6ca] FFTW v1.9.0 [1746e360] FdeSolver v1.0.9 [48062228] FilePathsBase v0.9.24 [53c48c17] FixedPointNumbers v0.8.5 [1fa38f19] Format v1.3.7 [28b8d3ca] GR v0.73.17 [42e2da0e] Grisu v1.0.2 [cd3eb016] HTTP v1.10.17 [313cdc1a] Indexing v1.1.1 [842dd82b] InlineStrings v1.4.5 [bd334432] InlineTest v0.2.0 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.4 [82899510] IteratorInterfaceExtensions v1.0.0 [1019f520] JLFzf v0.1.11 [692b3bcd] JLLWrappers v1.7.1 [682c06a0] JSON v0.21.4 [b964fa9f] LaTeXStrings v1.4.0 [23fbe1c1] Latexify v0.16.9 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.1.0 [1914dd2f] MacroTools v0.5.16 [739be429] MbedTLS v1.1.9 [442fdcdd] Measures v0.3.2 ⌅ [3bd8f0ae] Microbiome v0.9.4 [09137a06] MicrobiomeAnalysis v0.4.0 [e1d29d7a] Missings v1.2.0 [c9137f73] MultiAssayExperiments v0.2.0 ⌅ [6f286f6a] MultivariateStats v0.9.0 [77ba4419] NaNMath v1.1.3 [4d8831e6] OpenSSL v1.5.0 [bac558e1] OrderedCollections v1.8.1 [69de0a69] Parsers v2.8.3 [ccf2f8ad] PlotThemes v3.3.0 [995b91a9] PlotUtils v1.4.3 [91a5bcdd] Plots v1.40.19 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.2 [21216c6a] Preferences v1.5.0 ⌅ [08abe8d2] PrettyTables v2.4.0 [e0db7c4e] ReTest v0.3.4 [3cdcf5f2] RecipesBase v1.3.4 [01d81517] RecipesPipeline v0.6.12 [189a3867] Reexport v1.2.2 [05181044] RelocatableFolders v1.0.1 [ae029012] Requires v1.3.1 [1bc83da4] SafeTestsets v0.1.0 [6c6a2e73] Scratch v1.3.0 [91c51154] SentinelArrays v1.4.8 [992d4aef] Showoff v1.0.3 [777ac1f9] SimpleBufferStream v1.2.0 [a2af1166] SortingAlgorithms v1.2.2 [276daf66] SpecialFunctions v2.5.1 [860ef19b] StableRNGs v1.0.3 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 ⌅ [2913bbd2] StatsBase v0.33.21 [892a3eda] StringManipulation v0.4.1 [b04b66ec] SummarizedExperiments v0.2.0 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [62fd8b95] TensorCore v0.1.1 [3bb67fe8] TranscodingStreams v0.11.3 [5c2747f8] URIs v1.6.1 [1cfade01] UnicodeFun v0.4.1 [1986cc42] Unitful v1.24.0 [45397f5d] UnitfulLatexify v1.7.0 [41fe7b60] Unzip v0.2.0 [ea10d353] WeakRefStrings v1.4.2 [76eceee3] WorkerUtilities v1.6.1 ⌅ [68821587] Arpack_jll v3.5.1+1 [6e34b625] Bzip2_jll v1.0.9+0 [83423d85] Cairo_jll v1.18.5+0 [ee1fde0b] Dbus_jll v1.16.2+0 [2702e6a9] EpollShim_jll v0.0.20230411+1 [2e619515] Expat_jll v2.7.1+0 [b22a6f82] FFMPEG_jll v7.1.1+0 [f5851436] FFTW_jll v3.3.11+0 [a3f928ae] Fontconfig_jll v2.17.1+0 [d7e528f0] FreeType2_jll v2.13.4+0 [559328eb] FriBidi_jll v1.0.17+0 [0656b61e] GLFW_jll v3.4.0+2 [d2c73de3] GR_jll v0.73.17+0 [b0724c58] GettextRuntime_jll v0.22.4+0 [7746bdde] Glib_jll v2.84.3+0 [3b182d85] Graphite2_jll v1.3.15+0 [2e76f6c2] HarfBuzz_jll v8.5.1+0 [1d5cc7b8] IntelOpenMP_jll v2025.2.0+0 [aacddb02] JpegTurbo_jll v3.1.2+0 [c1c5ebd0] LAME_jll v3.100.3+0 [88015f11] LERC_jll v4.0.1+0 [1d63c593] LLVMOpenMP_jll v18.1.8+0 [dd4b983a] LZO_jll v2.10.3+0 [e9f186c6] Libffi_jll v3.4.7+0 [7e76a0d4] Libglvnd_jll v1.7.1+1 [94ce4f54] Libiconv_jll v1.18.0+0 [4b2f31a3] Libmount_jll v2.41.1+0 [89763e89] Libtiff_jll v4.7.1+0 [38a345b3] Libuuid_jll v2.41.1+0 [856f044c] MKL_jll v2025.2.0+0 [c8ffd9c3] MbedTLS_jll v2.28.6+2 [e7412a2a] Ogg_jll v1.3.6+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [91d4177d] Opus_jll v1.5.2+0 [36c8627f] Pango_jll v1.56.3+0 ⌅ [30392449] Pixman_jll v0.44.2+0 [c0090381] Qt6Base_jll v6.8.2+1 [629bc702] Qt6Declarative_jll v6.8.2+1 [ce943373] Qt6ShaderTools_jll v6.8.2+1 [e99dba38] Qt6Wayland_jll v6.8.2+1 [a44049a8] Vulkan_Loader_jll v1.3.243+0 [a2964d1f] Wayland_jll v1.24.0+0 [ffd25f8a] XZ_jll v5.8.1+0 [f67eecfb] Xorg_libICE_jll v1.1.2+0 [c834827a] Xorg_libSM_jll v1.2.6+0 [4f6342f7] Xorg_libX11_jll v1.8.12+0 [0c0b7dd1] Xorg_libXau_jll v1.0.13+0 [935fb764] Xorg_libXcursor_jll v1.2.4+0 [a3789734] Xorg_libXdmcp_jll v1.1.6+0 [1082639a] Xorg_libXext_jll v1.3.7+0 [d091e8ba] Xorg_libXfixes_jll v6.0.1+0 [a51aa0fd] Xorg_libXi_jll v1.8.3+0 [d1454406] Xorg_libXinerama_jll v1.1.6+0 [ec84b674] Xorg_libXrandr_jll v1.5.5+0 [ea2f1a96] Xorg_libXrender_jll v0.9.12+0 [c7cfdc94] Xorg_libxcb_jll v1.17.1+0 [cc61e674] Xorg_libxkbfile_jll v1.1.3+0 [e920d4aa] Xorg_xcb_util_cursor_jll v0.1.5+0 [12413925] Xorg_xcb_util_image_jll v0.4.1+0 [2def613f] Xorg_xcb_util_jll v0.4.1+0 [975044d2] Xorg_xcb_util_keysyms_jll v0.4.1+0 [0d47668e] Xorg_xcb_util_renderutil_jll v0.3.10+0 [c22f9ab0] Xorg_xcb_util_wm_jll v0.4.2+0 [35661453] Xorg_xkbcomp_jll v1.4.7+0 [33bec58e] Xorg_xkeyboard_config_jll v2.44.0+0 [c5fb5394] Xorg_xtrans_jll v1.6.0+0 [35ca27e7] eudev_jll v3.2.14+0 [214eeab7] fzf_jll v0.61.1+0 [a4ae2306] libaom_jll v3.12.1+0 [0ac62f75] libass_jll v0.17.4+0 [1183f4f0] libdecor_jll v0.2.2+0 [2db6ffa8] libevdev_jll v1.13.4+0 [f638f0a6] libfdk_aac_jll v2.0.4+0 [36db933b] libinput_jll v1.28.1+0 [b53b4c65] libpng_jll v1.6.50+0 [f27f6e37] libvorbis_jll v1.3.8+0 [009596ad] mtdev_jll v1.1.7+0 [1317d2d5] oneTBB_jll v2022.0.0+0 [1270edf5] x264_jll v10164.0.1+0 [dfaa095f] x265_jll v4.1.0+0 [d8fb68d0] xkbcommon_jll v1.9.2+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.13.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.13.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.15.0+1 [e37daf67] LibGit2_jll v1.9.1+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.8.12 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.7+0 [458c3c95] OpenSSL_jll v3.5.2+0 [efcefdf7] PCRE2_jll v10.46.0+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [3161d3a3] Zstd_jll v1.5.7+1 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.66.0+0 [3f19e933] p7zip_jll v17.6.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling packages... ✗ ReTest ✗ Microbiome Info Given MicrobiomeAnalysis was explicitly requested, output will be shown live  WARNING: Imported binding Test.pop_testset was undeclared at import time during import to Testset. WARNING: Imported binding Test.push_testset was undeclared at import time during import to Testset. ┌ Error: Precompilation failed, this is the captured stdout (114 chars): └ @ ReTest ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:36  Pass | Time / Compile / GC | Alloc ΔRSS | ReTest._ReTestPrecompileTests:  ┌ Error: And this is the captured stderr (0 chars): └ @ ReTest ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:39  ERROR: LoadError: TaskFailedException Stacktrace:  [1] #wait#584  @ ./task.jl:363 [inlined]  [2] wait  @ ./task.jl:360 [inlined]  [3] retest(::Union{Regex, AbstractString, Integer, Module, Symbol, Tuple, ReTest.Pattern, AbstractArray, Pair{Module, <:Union{Regex, AbstractString, Integer, Symbol, Tuple, ReTest.Pattern, AbstractArray}}}, ::Vararg{Union{Regex, AbstractString, Integer, Module, Symbol, Tuple, ReTest.Pattern, AbstractArray, Pair{Module, <:Union{Regex, AbstractString, Integer, Symbol, Tuple, ReTest.Pattern, AbstractArray}}}}; dry::Bool, stats::Bool, shuffle::Bool, group::Bool, verbose::Bool, recursive::Bool, id::Nothing, strict::Bool, dup::Bool, static::Nothing, load::Bool, seed::Bool, marks::Bool, tag::Vector{Symbol}, spin::Bool, clear::Bool)  @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1186  [4] kwcall(::@NamedTuple{recursive::Bool, stats::Bool, spin::Bool}, ::typeof(InlineTest.retest), ::Union{Regex, AbstractString, Integer, Module, Symbol, Tuple, ReTest.Pattern, AbstractArray, Pair{Module, <:Union{Regex, AbstractString, Integer, Symbol, Tuple, ReTest.Pattern, AbstractArray}}}, ::Vararg{Union{Regex, AbstractString, Integer, Module, Symbol, Tuple, ReTest.Pattern, AbstractArray, Pair{Module, <:Union{Regex, AbstractString, Integer, Symbol, Tuple, ReTest.Pattern, AbstractArray}}}})  @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:750  [5] #137  @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:26 [inlined]  [6] redirect_stdio(f::ReTest.var"#137#138"; stdin::Nothing, stderr::Pipe, stdout::Pipe)  @ Base ./stream.jl:1443  [7] kwcall(::@NamedTuple{stderr::Pipe, stdout::Pipe}, ::typeof(redirect_stdio), f::Function)  @ Base ./stream.jl:1406  [8] macro expansion  @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:25 [inlined]  [9] macro expansion  @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined]  [10] macro expansion  @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:23 [inlined]  [11] macro expansion  @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined]  [12] top-level scope  @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:118  [13] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:309  [14] top-level scope  @ ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1751  [15] include(mod::Module, _path::String)  @ Base ./Base.jl:308  [16] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)  @ Base ./loading.jl:3019  [17] top-level scope  @ stdin:5  [18] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2865  [20] include_string  @ ./loading.jl:2875 [inlined]  [21] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:328  [22] _start()  @ Base ./client.jl:563   nested task error: TaskFailedException   nested task error: UndefVarError: `push_testset` not defined in `ReTest.Testset`  Suggestion: this global was defined as `Test.push_testset` but not assigned a value.  Stacktrace:  [1] top-level scope  @ ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:517  [2] macro expansion  @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:12 [inlined]  [3] macro expansion  @ ~/.julia/packages/ReTest/3Ikse/src/testset.jl:517 [inlined]  [4] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [5] (::ReTest.var"#110#111"{ReTest.Testset.Format})(mod::Module, ts::ReTest.TestsetExpr, pat::ReTest.And, chan::@NamedTuple{out::Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, compute::Channel{Nothing}, preview::Nothing})  @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1154  [6] #local_remotecall_thunk##0  @ /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:425 [inlined]  [7] run_work_thunk(thunk::Distributed.var"#local_remotecall_thunk##0#local_remotecall_thunk##1"{ReTest.var"#110#111"{ReTest.Testset.Format}, Tuple{Module, ReTest.TestsetExpr, ReTest.And, @NamedTuple{out::Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, compute::Channel{Nothing}, preview::Nothing}}, @Kwargs{}}, print_error::Bool)  @ Distributed /opt/julia/share/julia/stdlib/v1.13/Distributed/src/process_messages.jl:70  [8] remotecall_fetch(::Function, ::Distributed.LocalProcess, ::Module, ::Vararg{Any}; kwargs::@Kwargs{})  @ Distributed /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:450  [9] remotecall_fetch  @ /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:449 [inlined]  [10] remotecall_fetch  @ /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:492 [inlined]  [11] (::ReTest.var"#106#107"{Int64, ReTest.Testset.Format, Nothing, ReTest.Testset.ReTestSet, Base.Threads.Atomic{Bool}, Channel{Nothing}, Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, Vector{Any}, ReTest.And, Module})()  @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1151  Stacktrace:  [1] remotecall_fetch(::Function, ::Distributed.LocalProcess, ::Module, ::Vararg{Any}; kwargs::@Kwargs{})  @ Distributed /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:451  [2] remotecall_fetch  @ /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:449 [inlined]  [3] remotecall_fetch  @ /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:492 [inlined]  [4] (::ReTest.var"#106#107"{Int64, ReTest.Testset.Format, Nothing, ReTest.Testset.ReTestSet, Base.Threads.Atomic{Bool}, Channel{Nothing}, Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, Vector{Any}, ReTest.And, Module})()  @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1151  Stacktrace:  [1] sync_end(c::Channel{Any})  @ Base ./task.jl:601  [2] macro expansion  @ ./task.jl:634 [inlined]  [3] (::ReTest.var"#96#97"{Bool, ReTest.Testset.Format, Bool, Base.RefValue{Int64}, Bool, ReTest.var"#take_latest!#91", Nothing, ReentrantLock, Bool, ReTest.Testset.ReTestSet, Base.Threads.Atomic{Bool}, Base.RefValue{Exception}, Channel{Nothing}, Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, Vector{Any}, ReTest.And, Module})()  @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1104 in expression starting at /home/pkgeval/.julia/packages/ReTest/3Ikse/src/precompile.jl:19 in expression starting at /home/pkgeval/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile ReTest [e0db7c4e-2690-44b9-bad6-7687da720f89] to "/home/pkgeval/.julia/compiled/v1.13/ReTest/jl_p1LYnq" (ProcessExited(1)). Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)  @ Base ./loading.jl:3306  [3] kwcall(::@NamedTuple{reasons::Dict{String, Int64}, loadable_exts::Nothing}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool)  @ Base ./loading.jl:3184  [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})()  @ Base ./loading.jl:2670  [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94  [6] #mkpidlock#7  @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined]  [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115  [8] #invokelatest_gr#233  @ ./reflection.jl:1335 [inlined]  [9] invokelatest_gr  @ ./reflection.jl:1327 [inlined]  [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)  @ Base ./loading.jl:3877  [11] maybe_cachefile_lock  @ ./loading.jl:3874 [inlined]  [12] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2656  [13] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2484  [14] macro expansion  @ ./loading.jl:2412 [inlined]  [15] macro expansion  @ ./lock.jl:376 [inlined]  [16] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2376  [17] require  @ ./loading.jl:2352 [inlined]  [18] eval_import_path  @ ./module.jl:36 [inlined]  [19] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [20] _eval_using(to::Module, path::Expr)  @ Base ./module.jl:137  [21] top-level scope  @ ~/.julia/packages/Microbiome/BvZqT/src/Microbiome.jl:74  [22] include(mod::Module, _path::String)  @ Base ./Base.jl:308  [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)  @ Base ./loading.jl:3019  [24] top-level scope  @ stdin:5  [25] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [26] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2865  [27] include_string  @ ./loading.jl:2875 [inlined]  [28] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:328  [29] _start()  @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/Microbiome/BvZqT/src/Microbiome.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Microbiome [3bd8f0ae-a0f2-5238-a5af-e1b399a4940c] to "/home/pkgeval/.julia/compiled/v1.13/Microbiome/jl_VBAr9Y" (ProcessExited(1)). Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)  @ Base ./loading.jl:3306  [3] kwcall(::@NamedTuple{reasons::Dict{String, Int64}, loadable_exts::Nothing}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool)  @ Base ./loading.jl:3184  [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})()  @ Base ./loading.jl:2670  [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94  [6] #mkpidlock#7  @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined]  [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115  [8] #invokelatest_gr#233  @ ./reflection.jl:1335 [inlined]  [9] invokelatest_gr  @ ./reflection.jl:1327 [inlined]  [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)  @ Base ./loading.jl:3877  [11] maybe_cachefile_lock  @ ./loading.jl:3874 [inlined]  [12] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2656  [13] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2484  [14] macro expansion  @ ./loading.jl:2412 [inlined]  [15] macro expansion  @ ./lock.jl:376 [inlined]  [16] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2376  [17] require  @ ./loading.jl:2352 [inlined]  [18] eval_import_path  @ ./module.jl:36 [inlined]  [19] eval_import_path_all(at::Module, path::Expr, keyword::String)  @ Base ./module.jl:60  [20] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr})  @ Base ./module.jl:101  [21] top-level scope  @ ~/.julia/packages/MicrobiomeAnalysis/fZGRE/src/MicrobiomeAnalysis.jl:10  [22] include(mod::Module, _path::String)  @ Base ./Base.jl:308  [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3019  [24] top-level scope  @ stdin:5  [25] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [26] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2865  [27] include_string  @ ./loading.jl:2875 [inlined]  [28] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:328  [29] _start()  @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/MicrobiomeAnalysis/fZGRE/src/MicrobiomeAnalysis.jl:1 in expression starting at stdin:5 ✗ MicrobiomeAnalysis 0 dependencies successfully precompiled in 93 seconds. 223 already precompiled. Estimating alpha diversity: Error During Test at /home/pkgeval/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:30 Got exception outside of a @test LoadError: The following 2 direct dependencies failed to precompile: MicrobiomeAnalysis Failed to precompile MicrobiomeAnalysis [09137a06-29c6-4e66-9476-ab7e4b8c7492] to "/home/pkgeval/.julia/compiled/v1.13/MicrobiomeAnalysis/jl_3IexAT" (ProcessExited(1)). WARNING: Imported binding Test.pop_testset was undeclared at import time during import to Testset. WARNING: Imported binding Test.push_testset was undeclared at import time during import to Testset. ┌ Error: Precompilation failed, this is the captured stdout (114 chars): └ @ ReTest ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:36 Pass | Time / Compile / GC | Alloc ΔRSS | ReTest._ReTestPrecompileTests: ┌ Error: And this is the captured stderr (0 chars): └ @ ReTest ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:39 ERROR: LoadError: TaskFailedException Stacktrace: [1] #wait#584 @ ./task.jl:363 [inlined] [2] wait @ ./task.jl:360 [inlined] [3] retest(::Union{Regex, AbstractString, Integer, Module, Symbol, Tuple, ReTest.Pattern, AbstractArray, Pair{Module, <:Union{Regex, AbstractString, Integer, Symbol, Tuple, ReTest.Pattern, AbstractArray}}}, ::Vararg{Union{Regex, AbstractString, Integer, Module, Symbol, Tuple, ReTest.Pattern, AbstractArray, Pair{Module, <:Union{Regex, AbstractString, Integer, Symbol, Tuple, ReTest.Pattern, AbstractArray}}}}; dry::Bool, stats::Bool, shuffle::Bool, group::Bool, verbose::Bool, recursive::Bool, id::Nothing, strict::Bool, dup::Bool, static::Nothing, load::Bool, seed::Bool, marks::Bool, tag::Vector{Symbol}, spin::Bool, clear::Bool) @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1186 [4] kwcall(::@NamedTuple{recursive::Bool, stats::Bool, spin::Bool}, ::typeof(InlineTest.retest), ::Union{Regex, AbstractString, Integer, Module, Symbol, Tuple, ReTest.Pattern, AbstractArray, Pair{Module, <:Union{Regex, AbstractString, Integer, Symbol, Tuple, ReTest.Pattern, AbstractArray}}}, ::Vararg{Union{Regex, AbstractString, Integer, Module, Symbol, Tuple, ReTest.Pattern, AbstractArray, Pair{Module, <:Union{Regex, AbstractString, Integer, Symbol, Tuple, ReTest.Pattern, AbstractArray}}}}) @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:750 [5] #137 @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:26 [inlined] [6] redirect_stdio(f::ReTest.var"#137#138"; stdin::Nothing, stderr::Pipe, stdout::Pipe) @ Base ./stream.jl:1443 [7] kwcall(::@NamedTuple{stderr::Pipe, stdout::Pipe}, ::typeof(redirect_stdio), f::Function) @ Base ./stream.jl:1406 [8] macro expansion @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:25 [inlined] [9] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [10] macro expansion @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:23 [inlined] [11] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined] [12] top-level scope @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:118 [13] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:309 [14] top-level scope @ ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1751 [15] include(mod::Module, _path::String) @ Base ./Base.jl:308 [16] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3019 [17] top-level scope @ stdin:5 [18] eval(m::Module, e::Any) @ Core ./boot.jl:489 [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2865 [20] include_string @ ./loading.jl:2875 [inlined] [21] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [22] _start() @ Base ./client.jl:563 nested task error: TaskFailedException nested task error: UndefVarError: `push_testset` not defined in `ReTest.Testset` Suggestion: this global was defined as `Test.push_testset` but not assigned a value. Stacktrace: [1] top-level scope @ ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:517 [2] macro expansion @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:12 [inlined] [3] macro expansion @ ~/.julia/packages/ReTest/3Ikse/src/testset.jl:517 [inlined] [4] eval(m::Module, e::Any) @ Core ./boot.jl:489 [5] (::ReTest.var"#110#111"{ReTest.Testset.Format})(mod::Module, ts::ReTest.TestsetExpr, pat::ReTest.And, chan::@NamedTuple{out::Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, compute::Channel{Nothing}, preview::Nothing}) @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1154 [6] #local_remotecall_thunk##0 @ /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:425 [inlined] [7] run_work_thunk(thunk::Distributed.var"#local_remotecall_thunk##0#local_remotecall_thunk##1"{ReTest.var"#110#111"{ReTest.Testset.Format}, Tuple{Module, ReTest.TestsetExpr, ReTest.And, @NamedTuple{out::Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, compute::Channel{Nothing}, preview::Nothing}}, @Kwargs{}}, print_error::Bool) @ Distributed /opt/julia/share/julia/stdlib/v1.13/Distributed/src/process_messages.jl:70 [8] remotecall_fetch(::Function, ::Distributed.LocalProcess, ::Module, ::Vararg{Any}; kwargs::@Kwargs{}) @ Distributed /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:450 [9] remotecall_fetch @ /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:449 [inlined] [10] remotecall_fetch @ /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:492 [inlined] [11] (::ReTest.var"#106#107"{Int64, ReTest.Testset.Format, Nothing, ReTest.Testset.ReTestSet, Base.Threads.Atomic{Bool}, Channel{Nothing}, Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, Vector{Any}, ReTest.And, Module})() @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1151 Stacktrace: [1] remotecall_fetch(::Function, ::Distributed.LocalProcess, ::Module, ::Vararg{Any}; kwargs::@Kwargs{}) @ Distributed /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:451 [2] remotecall_fetch @ /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:449 [inlined] [3] remotecall_fetch @ /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:492 [inlined] [4] (::ReTest.var"#106#107"{Int64, ReTest.Testset.Format, Nothing, ReTest.Testset.ReTestSet, Base.Threads.Atomic{Bool}, Channel{Nothing}, Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, Vector{Any}, ReTest.And, Module})() @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1151 Stacktrace: [1] sync_end(c::Channel{Any}) @ Base ./task.jl:601 [2] macro expansion @ ./task.jl:634 [inlined] [3] (::ReTest.var"#96#97"{Bool, ReTest.Testset.Format, Bool, Base.RefValue{Int64}, Bool, ReTest.var"#take_latest!#91", Nothing, ReentrantLock, Bool, ReTest.Testset.ReTestSet, Base.Threads.Atomic{Bool}, Base.RefValue{Exception}, Channel{Nothing}, Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, Vector{Any}, ReTest.And, Module})() @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1104 in expression starting at /home/pkgeval/.julia/packages/ReTest/3Ikse/src/precompile.jl:19 in expression starting at /home/pkgeval/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile ReTest [e0db7c4e-2690-44b9-bad6-7687da720f89] to "/home/pkgeval/.julia/compiled/v1.13/ReTest/jl_p1LYnq" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3306 [3] kwcall(::@NamedTuple{reasons::Dict{String, Int64}, loadable_exts::Nothing}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:3184 [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})() @ Base ./loading.jl:2670 [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [6] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [8] #invokelatest_gr#233 @ ./reflection.jl:1335 [inlined] [9] invokelatest_gr @ ./reflection.jl:1327 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3877 [11] maybe_cachefile_lock @ ./loading.jl:3874 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2656 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2484 [14] macro expansion @ ./loading.jl:2412 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2376 [17] require @ ./loading.jl:2352 [inlined] [18] eval_import_path @ ./module.jl:36 [inlined] [19] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [20] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [21] top-level scope @ ~/.julia/packages/Microbiome/BvZqT/src/Microbiome.jl:74 [22] include(mod::Module, _path::String) @ Base ./Base.jl:308 [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3019 [24] top-level scope @ stdin:5 [25] eval(m::Module, e::Any) @ Core ./boot.jl:489 [26] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2865 [27] include_string @ ./loading.jl:2875 [inlined] [28] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [29] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/Microbiome/BvZqT/src/Microbiome.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Microbiome [3bd8f0ae-a0f2-5238-a5af-e1b399a4940c] to "/home/pkgeval/.julia/compiled/v1.13/Microbiome/jl_VBAr9Y" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3306 [3] kwcall(::@NamedTuple{reasons::Dict{String, Int64}, loadable_exts::Nothing}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:3184 [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})() @ Base ./loading.jl:2670 [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [6] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [8] #invokelatest_gr#233 @ ./reflection.jl:1335 [inlined] [9] invokelatest_gr @ ./reflection.jl:1327 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3877 [11] maybe_cachefile_lock @ ./loading.jl:3874 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2656 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2484 [14] macro expansion @ ./loading.jl:2412 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2376 [17] require @ ./loading.jl:2352 [inlined] [18] eval_import_path @ ./module.jl:36 [inlined] [19] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [20] _eval_import(::Bool, ::Module, ::Expr, ::Expr, ::Vararg{Expr}) @ Base ./module.jl:101 [21] top-level scope @ ~/.julia/packages/MicrobiomeAnalysis/fZGRE/src/MicrobiomeAnalysis.jl:10 [22] include(mod::Module, _path::String) @ Base ./Base.jl:308 [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3019 [24] top-level scope @ stdin:5 [25] eval(m::Module, e::Any) @ Core ./boot.jl:489 [26] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2865 [27] include_string @ ./loading.jl:2875 [inlined] [28] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [29] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/MicrobiomeAnalysis/fZGRE/src/MicrobiomeAnalysis.jl:1 in expression starting at stdin:5 Microbiome Failed to precompile Microbiome [3bd8f0ae-a0f2-5238-a5af-e1b399a4940c] to "/home/pkgeval/.julia/compiled/v1.13/Microbiome/jl_3wSydU" (ProcessExited(1)). WARNING: Imported binding Test.pop_testset was undeclared at import time during import to Testset. WARNING: Imported binding Test.push_testset was undeclared at import time during import to Testset. ┌ Error: Precompilation failed, this is the captured stdout (114 chars): └ @ ReTest ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:36 Pass | Time / Compile / GC | Alloc ΔRSS | ReTest._ReTestPrecompileTests: ┌ Error: And this is the captured stderr (0 chars): └ @ ReTest ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:39 ERROR: LoadError: TaskFailedException Stacktrace: [1] #wait#584 @ ./task.jl:363 [inlined] [2] wait @ ./task.jl:360 [inlined] [3] retest(::Union{Regex, AbstractString, Integer, Module, Symbol, Tuple, ReTest.Pattern, AbstractArray, Pair{Module, <:Union{Regex, AbstractString, Integer, Symbol, Tuple, ReTest.Pattern, AbstractArray}}}, ::Vararg{Union{Regex, AbstractString, Integer, Module, Symbol, Tuple, ReTest.Pattern, AbstractArray, Pair{Module, <:Union{Regex, AbstractString, Integer, Symbol, Tuple, ReTest.Pattern, AbstractArray}}}}; dry::Bool, stats::Bool, shuffle::Bool, group::Bool, verbose::Bool, recursive::Bool, id::Nothing, strict::Bool, dup::Bool, static::Nothing, load::Bool, seed::Bool, marks::Bool, tag::Vector{Symbol}, spin::Bool, clear::Bool) @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1186 [4] kwcall(::@NamedTuple{recursive::Bool, stats::Bool, spin::Bool}, ::typeof(InlineTest.retest), ::Union{Regex, AbstractString, Integer, Module, Symbol, Tuple, ReTest.Pattern, AbstractArray, Pair{Module, <:Union{Regex, AbstractString, Integer, Symbol, Tuple, ReTest.Pattern, AbstractArray}}}, ::Vararg{Union{Regex, AbstractString, Integer, Module, Symbol, Tuple, ReTest.Pattern, AbstractArray, Pair{Module, <:Union{Regex, AbstractString, Integer, Symbol, Tuple, ReTest.Pattern, AbstractArray}}}}) @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:750 [5] #137 @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:26 [inlined] [6] redirect_stdio(f::ReTest.var"#137#138"; stdin::Nothing, stderr::Pipe, stdout::Pipe) @ Base ./stream.jl:1443 [7] kwcall(::@NamedTuple{stderr::Pipe, stdout::Pipe}, ::typeof(redirect_stdio), f::Function) @ Base ./stream.jl:1406 [8] macro expansion @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:25 [inlined] [9] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [10] macro expansion @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:23 [inlined] [11] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined] [12] top-level scope @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:118 [13] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:309 [14] top-level scope @ ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1751 [15] include(mod::Module, _path::String) @ Base ./Base.jl:308 [16] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:3019 [17] top-level scope @ stdin:5 [18] eval(m::Module, e::Any) @ Core ./boot.jl:489 [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2865 [20] include_string @ ./loading.jl:2875 [inlined] [21] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [22] _start() @ Base ./client.jl:563 nested task error: TaskFailedException nested task error: UndefVarError: `push_testset` not defined in `ReTest.Testset` Suggestion: this global was defined as `Test.push_testset` but not assigned a value. Stacktrace: [1] top-level scope @ ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:517 [2] macro expansion @ ~/.julia/packages/ReTest/3Ikse/src/precompile.jl:12 [inlined] [3] macro expansion @ ~/.julia/packages/ReTest/3Ikse/src/testset.jl:517 [inlined] [4] eval(m::Module, e::Any) @ Core ./boot.jl:489 [5] (::ReTest.var"#110#111"{ReTest.Testset.Format})(mod::Module, ts::ReTest.TestsetExpr, pat::ReTest.And, chan::@NamedTuple{out::Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, compute::Channel{Nothing}, preview::Nothing}) @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1154 [6] #local_remotecall_thunk##0 @ /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:425 [inlined] [7] run_work_thunk(thunk::Distributed.var"#local_remotecall_thunk##0#local_remotecall_thunk##1"{ReTest.var"#110#111"{ReTest.Testset.Format}, Tuple{Module, ReTest.TestsetExpr, ReTest.And, @NamedTuple{out::Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, compute::Channel{Nothing}, preview::Nothing}}, @Kwargs{}}, print_error::Bool) @ Distributed /opt/julia/share/julia/stdlib/v1.13/Distributed/src/process_messages.jl:70 [8] remotecall_fetch(::Function, ::Distributed.LocalProcess, ::Module, ::Vararg{Any}; kwargs::@Kwargs{}) @ Distributed /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:450 [9] remotecall_fetch @ /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:449 [inlined] [10] remotecall_fetch @ /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:492 [inlined] [11] (::ReTest.var"#106#107"{Int64, ReTest.Testset.Format, Nothing, ReTest.Testset.ReTestSet, Base.Threads.Atomic{Bool}, Channel{Nothing}, Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, Vector{Any}, ReTest.And, Module})() @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1151 Stacktrace: [1] remotecall_fetch(::Function, ::Distributed.LocalProcess, ::Module, ::Vararg{Any}; kwargs::@Kwargs{}) @ Distributed /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:451 [2] remotecall_fetch @ /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:449 [inlined] [3] remotecall_fetch @ /opt/julia/share/julia/stdlib/v1.13/Distributed/src/remotecall.jl:492 [inlined] [4] (::ReTest.var"#106#107"{Int64, ReTest.Testset.Format, Nothing, ReTest.Testset.ReTestSet, Base.Threads.Atomic{Bool}, Channel{Nothing}, Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, Vector{Any}, ReTest.And, Module})() @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1151 Stacktrace: [1] sync_end(c::Channel{Any}) @ Base ./task.jl:601 [2] macro expansion @ ./task.jl:634 [inlined] [3] (::ReTest.var"#96#97"{Bool, ReTest.Testset.Format, Bool, Base.RefValue{Int64}, Bool, ReTest.var"#take_latest!#91", Nothing, ReentrantLock, Bool, ReTest.Testset.ReTestSet, Base.Threads.Atomic{Bool}, Base.RefValue{Exception}, Channel{Nothing}, Distributed.RemoteChannel{Channel{Union{Nothing, ReTest.Testset.ReTestSet}}}, Vector{Any}, ReTest.And, Module})() @ ReTest ~/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1104 in expression starting at /home/pkgeval/.julia/packages/ReTest/3Ikse/src/precompile.jl:19 in expression starting at /home/pkgeval/.julia/packages/ReTest/3Ikse/src/ReTest.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile ReTest [e0db7c4e-2690-44b9-bad6-7687da720f89] to "/home/pkgeval/.julia/compiled/v1.13/ReTest/jl_hug8eL" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3306 [3] kwcall(::@NamedTuple{reasons::Dict{String, Int64}, loadable_exts::Nothing}, ::typeof(Base.compilecache), pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool) @ Base ./loading.jl:3184 [4] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}})() @ Base ./loading.jl:2670 [5] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:94 [6] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:89 [inlined] [7] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:115 [8] #invokelatest_gr#233 @ ./reflection.jl:1335 [inlined] [9] invokelatest_gr @ ./reflection.jl:1327 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId, String, Dict{String, Int64}}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3877 [11] maybe_cachefile_lock @ ./loading.jl:3874 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2656 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2484 [14] macro expansion @ ./loading.jl:2412 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2376 [17] require @ ./loading.jl:2352 [inlined] [18] eval_import_path @ ./module.jl:36 [inlined] [19] eval_import_path_all(at::Module, path::Expr, keyword::String) @ Base ./module.jl:60 [20] _eval_using(to::Module, path::Expr) @ Base ./module.jl:137 [21] top-level scope @ ~/.julia/packages/Microbiome/BvZqT/src/Microbiome.jl:74 [22] include(mod::Module, _path::String) @ Base ./Base.jl:308 [23] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:3019 [24] top-level scope @ stdin:5 [25] eval(m::Module, e::Any) @ Core ./boot.jl:489 [26] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2865 [27] include_string @ ./loading.jl:2875 [inlined] [28] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [29] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/Microbiome/BvZqT/src/Microbiome.jl:1 in expression starting at stdin:5 in expression starting at /home/pkgeval/.julia/packages/MicrobiomeAnalysis/fZGRE/test/test_alpha.jl:1 Test Summary: | Error Total Time Estimating alpha diversity | 1 1 1m33.7s RNG of the outermost testset: Random.Xoshiro(0x213e63fd88a9a6ff, 0x3d1e5b137f10e897, 0x92260f17e7ed0433, 0x8446502930b38138, 0x5143f1cfe265fe4b) ERROR: LoadError: Some tests did not pass: 0 passed, 0 failed, 1 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/MicrobiomeAnalysis/fZGRE/test/runtests.jl:3 Testing failed after 102.1s ERROR: LoadError: Package MicrobiomeAnalysis errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2673 [3] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2522 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:538 [5] kwcall(::@NamedTuple{julia_args::Cmd, io::IOContext{IO}}, ::typeof(Pkg.API.test), ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:515 [6] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:168 [7] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkgs::Vector{PackageSpec}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:157 [8] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [9] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:156 [inlined] [10] kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(Pkg.API.test), pkg::String) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:155 [11] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [12] include(mod::Module, _path::String) @ Base ./Base.jl:308 [13] exec_options(opts::Base.JLOptions) @ Base ./client.jl:330 [14] _start() @ Base ./client.jl:563 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 1025.16s: package fails to precompile