Package evaluation of VIDA on Julia 1.13.0-DEV.985 (9c94e7ae32*) started at 2025-08-15T01:23:37.143 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 11.03s ################################################################################ # Installation # Installing VIDA... Resolving package versions... Installed CompositionsBase ──────────── v0.1.2 Installed MacroTools ────────────────── v0.5.16 Installed ForwardDiff ───────────────── v1.0.1 Installed CommonWorldInvalidations ──── v1.0.0 Installed MicroCollections ──────────── v0.2.0 Installed DefineSingletons ──────────── v0.1.2 Installed NameResolution ────────────── v0.1.5 Installed DataStructures ────────────── v0.19.0 Installed Rmath_jll ─────────────────── v0.5.1+0 Installed DiffResults ───────────────── v1.1.0 Installed VIDA ──────────────────────── v0.13.3 Installed FillArrays ────────────────── v1.13.0 Installed FLoops ────────────────────── v0.2.2 Installed ComponentArrays ───────────── v0.15.29 Installed PaddedViews ───────────────── v0.5.12 Installed HypercubeTransform ────────── v0.4.13 Installed Bzip2_jll ─────────────────── v1.0.9+0 Installed PolarizedTypes ────────────── v0.1.2 Installed Adapt ─────────────────────── v4.3.0 Installed Tricks ────────────────────── v0.1.12 Installed Extents ───────────────────── v0.1.6 Installed MKL_jll ───────────────────── v2025.2.0+0 Installed libaec_jll ────────────────── v1.1.3+0 Installed ContextVariablesX ─────────── v0.1.3 Installed ConstructionBase ──────────── v1.6.0 Installed HypergeometricFunctions ───── v0.3.28 Installed MPICH_jll ─────────────────── v4.3.1+0 Installed DelimitedFiles ────────────── v1.9.1 Installed oneTBB_jll ────────────────── v2022.0.0+0 Installed JuliaVariables ────────────── v0.2.4 Installed OrderedCollections ────────── v1.8.1 Installed ArrayInterface ────────────── v7.19.0 Installed AliasTables ───────────────── v1.1.3 Installed Functors ──────────────────── v0.5.2 Installed ComradeBase ───────────────── v0.9.4 Installed StatsBase ─────────────────── v0.34.6 Installed Compat ────────────────────── v4.18.0 Installed MicrosoftMPI_jll ──────────── v10.1.4+3 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed RecipesBase ───────────────── v1.3.4 Installed DataAPI ───────────────────── v1.16.0 Installed InvertedIndices ───────────── v1.3.1 Installed Statistics ────────────────── v1.11.1 Installed PrecompileTools ───────────── v1.3.2 Installed IntelOpenMP_jll ───────────── v2025.2.0+0 Installed DataValueInterfaces ───────── v1.0.0 Installed EnzymeCore ────────────────── v0.8.12 Installed StatsAPI ──────────────────── v1.7.1 Installed InitialValues ─────────────── v0.3.1 Installed StructArrays ──────────────── v0.7.1 Installed CommonSubexpressions ──────── v0.3.1 Installed OffsetArrays ──────────────── v1.17.0 Installed StaticArraysCore ──────────── v1.4.3 Installed PrettyPrint ───────────────── v0.2.0 Installed ArgCheck ──────────────────── v2.5.0 Installed IrrationalConstants ───────── v0.2.4 Installed FITSIO ────────────────────── v0.17.5 Installed ChainRulesCore ────────────── v1.26.0 Installed AbstractFFTs ──────────────── v1.5.0 Installed BangBang ──────────────────── v0.4.4 Installed StaticArrays ──────────────── v1.9.14 Installed StaticArrayInterface ──────── v1.8.0 Installed NFFT ──────────────────────── v0.13.7 Installed DimensionalData ───────────── v0.29.21 Installed Ratios ────────────────────── v0.4.5 Installed QuadGK ────────────────────── v2.11.2 Installed AxisAlgorithms ────────────── v1.1.0 Installed NaNMath ───────────────────── v1.1.3 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed Requires ──────────────────── v1.3.1 Installed OpenMPI_jll ───────────────── v5.0.8+0 Installed FLoopsBase ────────────────── v0.1.1 Installed HDF5_jll ──────────────────── v1.14.6+0 Installed LogExpFunctions ───────────── v0.3.29 Installed TransformVariables ────────── v0.8.17 Installed Interpolations ────────────── v0.16.1 Installed VLBISkyModels ─────────────── v0.6.16 Installed Distributions ─────────────── v0.25.120 Installed Memoize ───────────────────── v0.4.4 Installed DiffRules ─────────────────── v1.15.1 Installed Hwloc_jll ─────────────────── v2.12.1+0 Installed NamedTupleTools ───────────── v0.14.3 Installed Rmath ─────────────────────── v0.8.0 Installed Interfaces ────────────────── v0.3.2 Installed IfElse ────────────────────── v0.1.1 Installed CFITSIO ───────────────────── v1.7.2 Installed CFITSIO_jll ───────────────── v4.6.2+0 Installed SplittablesBase ───────────── v0.1.15 Installed WoodburyMatrices ──────────── v1.0.0 Installed StatsFuns ─────────────────── v1.5.0 Installed PtrArrays ─────────────────── v1.3.0 Installed BasicInterpolators ────────── v0.7.1 Installed Tables ────────────────────── v1.12.1 Installed InverseFunctions ──────────── v0.1.17 Installed SpecialFunctions ──────────── v2.5.1 Installed Transducers ───────────────── v0.4.84 Installed Reexport ──────────────────── v1.2.2 Installed Missings ──────────────────── v1.2.0 Installed Setfield ──────────────────── v1.1.2 Installed IntervalSets ──────────────── v0.7.11 Installed MPIPreferences ────────────── v0.1.11 Installed Baselet ───────────────────── v0.1.1 Installed Static ────────────────────── v1.2.0 Installed Preferences ───────────────── v1.5.0 Installed FFTW_jll ──────────────────── v3.3.11+0 Installed JLLWrappers ───────────────── v1.7.1 Installed PDMats ────────────────────── v0.11.35 Installed FFTW ──────────────────────── v1.9.0 Installed TableTraits ───────────────── v1.0.1 Installed SortingAlgorithms ─────────── v1.2.2 Installed GridInterpolations ────────── v1.3.0 Installed HDF5 ──────────────────────── v0.17.2 Installed MPItrampoline_jll ─────────── v5.5.4+0 Installed AbstractNFFTs ─────────────── v0.8.2 Installed DocStringExtensions ───────── v0.9.5 Installed Accessors ─────────────────── v0.1.42 Installed MLStyle ───────────────────── v0.4.17 Installing 10 artifacts Installed artifact libaec 96.2 KiB Installed artifact Rmath 121.9 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact oneTBB 435.6 KiB Installed artifact Bzip2 503.5 KiB Installed artifact CFITSIO 896.7 KiB Installed artifact FFTW 2.2 MiB Installed artifact Hwloc 3.5 MiB Installed artifact MPICH 3.3 MiB Installed artifact HDF5 5.7 MiB Updating `~/.julia/environments/v1.13/Project.toml` [4096cdfb] + VIDA v0.13.3 Updating `~/.julia/environments/v1.13/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [7f219486] + AbstractNFFTs v0.8.2 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [4fba245c] + ArrayInterface v7.19.0 [13072b0f] + AxisAlgorithms v1.1.0 [198e06fe] + BangBang v0.4.4 [9718e550] + Baselet v0.1.1 [26cce99e] + BasicInterpolators v0.7.1 [3b1b4be9] + CFITSIO v1.7.2 [d360d2e6] + ChainRulesCore v1.26.0 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.18.0 [b0b7db55] + ComponentArrays v0.15.29 [a33af91c] + CompositionsBase v0.1.2 [6d8c423b] + ComradeBase v0.9.4 [187b0558] + ConstructionBase v1.6.0 [6add18c4] + ContextVariablesX v0.1.3 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.19.0 [e2d170a0] + DataValueInterfaces v1.0.0 [244e2a9f] + DefineSingletons v0.1.2 [8bb1440f] + DelimitedFiles v1.9.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [0703355e] + DimensionalData v0.29.21 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [f151be2c] + EnzymeCore v0.8.12 [411431e0] + Extents v0.1.6 [7a1cc6ca] + FFTW v1.9.0 [525bcba6] + FITSIO v0.17.5 [cc61a311] + FLoops v0.2.2 [b9860ae5] + FLoopsBase v0.1.1 [1a297f60] + FillArrays v1.13.0 [f6369f11] + ForwardDiff v1.0.1 [d9f16b24] + Functors v0.5.2 [bb4c363b] + GridInterpolations v1.3.0 [f67ccb44] + HDF5 v0.17.2 [9ec9aee3] + HypercubeTransform v0.4.13 [34004b35] + HypergeometricFunctions v0.3.28 [615f187c] + IfElse v0.1.1 [22cec73e] + InitialValues v0.3.1 [85a1e053] + Interfaces v0.3.2 [a98d9a8b] + Interpolations v0.16.1 [8197267c] + IntervalSets v0.7.11 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.1 [b14d175d] + JuliaVariables v0.2.4 [2ab3a3ac] + LogExpFunctions v0.3.29 [d8e11817] + MLStyle v0.4.17 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.16 [c03570c3] + Memoize v0.4.4 [128add7d] + MicroCollections v0.2.0 [e1d29d7a] + Missings v1.2.0 [efe261a4] + NFFT v0.13.7 [77ba4419] + NaNMath v1.1.3 [71a1bf82] + NameResolution v0.1.5 [d9ec5142] + NamedTupleTools v0.14.3 [6fe1bfb0] + OffsetArrays v1.17.0 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.35 [5432bcbf] + PaddedViews v0.5.12 [d3c5d4cd] + PolarizedTypes v0.1.2 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.5.0 [8162dcfd] + PrettyPrint v0.2.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [c84ed2f1] + Ratios v0.4.5 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.2 [276daf66] + SpecialFunctions v2.5.1 [171d559e] + SplittablesBase v0.1.15 [aedffcd0] + Static v1.2.0 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.14 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.6 [4c63d2b9] + StatsFuns v1.5.0 [09ab397b] + StructArrays v0.7.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [28d57a85] + Transducers v0.4.84 [84d833dd] + TransformVariables v0.8.17 [410a4b4d] + Tricks v0.1.12 [4096cdfb] + VIDA v0.13.3 [d6343c73] + VLBISkyModels v0.6.16 [efce3f68] + WoodburyMatrices v1.0.0 [6e34b625] + Bzip2_jll v1.0.9+0 [b3e40c51] + CFITSIO_jll v4.6.2+0 [f5851436] + FFTW_jll v3.3.11+0 [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.1+0 [1d5cc7b8] + IntelOpenMP_jll v2025.2.0+0 [856f044c] + MKL_jll v2025.2.0+0 [7cb0a576] + MPICH_jll v4.3.1+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.8+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [477f73a3] + libaec_jll v1.1.3+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.13.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+1 [e37daf67] + LibGit2_jll v1.9.1+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.7.15 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.5.2+0 [efcefdf7] + PCRE2_jll v10.45.0+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [3161d3a3] + Zstd_jll v1.5.7+1 [8e850b90] + libblastrampoline_jll v5.13.1+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Installation completed after 16.38s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4507.6 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 27 already precompiled. ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/nGMfF/src/julia-1.11/activate_set.jl:76 Precompiling package dependencies... ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 168 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_73644.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2376 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007677a30f5780 Total snapshots: 438. Utilization: 0% ╎438 @Base/task.jl:1129 wait_forever() 437╎ 438 @Base/task.jl:1192 wait() ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_73644.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2376 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007197955f0c40 Total snapshots: 427. Utilization: 0% ╎427 @Base/task.jl:1129 wait_forever() 426╎ 427 @Base/task.jl:1192 wait() [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:152 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_73644.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2376 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) Allocations: 18551987 (Pool: 18551151; Big: 836); GC: 22 [168] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/precompile.jl:37 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 wait at ./task.jl:1192 wait_forever at ./task.jl:1129 jfptr_wait_forever_73644.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4015 [inlined] ijl_apply_generic at /source/src/gf.c:4212 jl_apply at /source/src/julia.h:2376 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) Allocations: 35336285 (Pool: 35334410; Big: 1875); GC: 77 PkgEval terminated after 2732.63s: test duration exceeded the time limit